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2020-06-04gnu: python-pypairix: Update to 0.3.7 and build programs.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python-pypairix): Update to 0.3.7. [source]: Fetch from github. [arguments]: Add phases "build-programs" and "install-programs".
2020-06-03gnu: sameboy: Update to 0.13.1 [security fix].Jakub Kądziołka
* gnu/packages/emulators.scm (sameboy): Update to 0.13.1.
2020-06-03gnu: linux-libre: Update to 5.4.44.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.44. (linux-libre-5.4-pristine-source): Update hash.
2020-06-03gnu: linux-libre@5.6: Update to 5.6.16.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-5.6-version): Update to 5.6.16. (linux-libre-5.6-pristine-source): Update hash.
2020-06-03gnu: linux-libre@4.19: Update to 4.19.126.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.126. (linux-libre-4.19-pristine-source): Update hash.
2020-06-03gnu: linux-libre@4.14: Update to 4.14.183.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.183. (linux-libre-4.14-pristine-source): Update hash.
2020-06-03gnu: linux-libre@4.9: Update to 4.9.226.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.226. (linux-libre-4.9-pristine-source): Update hash.
2020-06-03gnu: linux-libre@4.4: Update to 4.4.226.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.226. (linux-libre-4.4-pristine-source): Update hash.
2020-06-03gnu: mpg123: Update to 1.26.1.Tobias Geerinckx-Rice
* gnu/packages/mp3.scm (mpg123): Update to 1.26.1.
2020-06-03gnu: ncdu: Update to 1.15.Tobias Geerinckx-Rice
* gnu/packages/ncdu.scm (ncdu): Update to 1.15.
2020-06-03gnu: lsp-plugins: Update to 1.1.22.Tobias Geerinckx-Rice
* gnu/packages/music.scm (lsp-plugins): Update to 1.1.22.
2020-06-03gnu: perl-net-dns: Update to 1.24.Tobias Geerinckx-Rice
* gnu/packages/networking.scm (perl-net-dns): Update to 1.24.
2020-06-03gnu: ocaml-extlib: Update to 1.7.7.Tobias Geerinckx-Rice
* gnu/packages/ocaml.scm (ocaml-extlib): Update to 1.7.7. [source]: Update TLD.
2020-06-03gnu: hcxdumptool: Fix cross-compilation.Tobias Geerinckx-Rice
* gnu/packages/networking.scm (hcxdumptool)[arguments]: Use CC-FOR-TARGET.
2020-06-03gnu: hcxdumptool: Update to 6.0.6.Tobias Geerinckx-Rice
* gnu/packages/networking.scm (hcxdumptool): Update to 6.0.6. [inputs]: Add openssl.
2020-06-03gnu: Add mergerfs-tools.Lars-Dominik Braun
* gnu/packages/storage.scm (mergerfs-tools): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-06-03gnu: Add mergerfs.Lars-Dominik Braun
* gnu/packages/storage.scm (mergerfs): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-06-03gnu: Add Polish hunspell dictionary.Marcin Karpezo
* gnu/packages/libreoffice.scm (hunspell-dict-pl): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-06-03gnu: java-openjfx-build: Fix indentation.Alexey Abramov
* gnu/packages/java.scm (java-openjfx-build)[source]: Change the indentation of the uri dirictive. Signed-off-by: Alexey Abramov <levenson@mmer.org> Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-06-03gnu: java-openjfx-build: Add helpful patch.Alexey Abramov
* gnu/packages/java.scm (java-openjfx-build)[source]: Use it. * gnu/packages/patches/java-openjfx-build-jdk_version.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Alexey Abramov <levenson@mmer.org> Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-06-03doc: Mention Btrfs compression.Ludovic Courtès
Suggested by Pierre Neidhardt <mail@ambrevar.xyz>. * doc/guix.texi (Keyboard Layout and Networking and Partitioning): Mention Btrfs compression.
2020-06-03gnu: shepherd: Update to 0.8.1.Ludovic Courtès
* gnu/packages/admin.scm (shepherd): Update to 0.8.1.
2020-06-03gnu: python-can: Update to 3.3.3.Maxim Cournoyer
This fixes the build of python-can, which is very exacting w.r.t. to its dependencies. * gnu/packages/python-xyz.scm (python-can): Update to 3.3.3. [phases]{relax-version-requirements}: New phase. [native-inputs]: Add python-coverage. [license]: Correct the license to lgpl3+.
2020-06-03gnu: services: docker: Add a debug? parameter.Maxim Cournoyer
* gnu/services/docker.scm (docker-configuration): Add a debug? field. (containerd-shepherd-service): Pass the "--log-level=debug" argument when DEBUG? is true. (docker-shepherd-service): Pass the "--debug" and "--log-level=debug" arguments when DEBUG? is true. * doc/guix.texi (Miscellaneous Services): Update doc.
2020-06-03gnu: Add python-pairtools.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python-pairtools): New variable.
2020-06-03gnu: Remove bedtools-2.26.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (bedtools-2.26): Remove variable.
2020-06-03gnu: python-pybedtools: Disable unreliable test.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python-pybedtools)[arguments]: Disable test_intron_exon_reads test; run tests verbosely. test_intron_exon_reads
2020-06-03gnu: librdkafka: Update to 1.4.2.Katherine Cox-Buday
* gnu/packages/networking.scm (librdkafka): Update to 1.4.2. Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2020-06-03gnu: global: Don't build static libraries.Efraim Flashner
* gnu/packages/code.scm (global)[arguments]: Add configure-flag to disable static libraries.
2020-06-03gnu: global: Move vim plugins to correct directory.Efraim Flashner
* gnu/packages/code.scm (global)[arguments]: Adjust 'post-install phase to install vim plugin files to the expected directory.
2020-06-03gnu: emacs-auctex: Update to 12.2.3.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-auctex): Update to 12.2.3.
2020-06-03gnu: fmt: Update to 6.2.1.Tobias Geerinckx-Rice
* gnu/packages/pretty-print.scm (fmt): Update to 6.2.1.
2020-06-03gnu: camlp5: Update to 7.12.Tobias Geerinckx-Rice
* gnu/packages/ocaml.scm (camlp5): Update to 7.12.
2020-06-03gnu: re2: Update to 2020-06-01.Tobias Geerinckx-Rice
* gnu/packages/regex.scm (re2): Update to 2020-06-01.
2020-06-03gnu: nix: Update to 2.3.5.Tobias Geerinckx-Rice
* gnu/packages/package-management.scm (nix): Update to 2.3.5.
2020-06-03gnu: intel-vaapi-driver: Update to 2.4.1.Tobias Geerinckx-Rice
* gnu/packages/video.scm (intel-vaapi-driver): Update to 2.4.1. [source]: Use GIT-FETCH and GIT-FILE-NAME. [native-inputs]: Add autoconf, automake, and libtool.
2020-06-03gnu: osinfo-db: Update to 20200529.Tobias Geerinckx-Rice
* gnu/packages/virtualization.scm (osinfo-db): Update to 20200529.
2020-06-03gnu: osinfo-db-tools: Update to 1.8.0.Tobias Geerinckx-Rice
* gnu/packages/virtualization.scm (osinfo-db-tools): Update to 1.8.0.
2020-06-03gnu: qutebrowser: Update to 1.12.0.Tobias Geerinckx-Rice
* gnu/packages/web-browsers.scm (qutebrowser): Update to 1.12.0.
2020-06-03gnu: bs1770gain: Deduplicate home page URLs.Tobias Geerinckx-Rice
* gnu/packages/audio.scm (bs1770gain)[source]: Re-use the HOME-PAGE field in the snippet.
2020-06-03gnu: bs1770gain: Update to 0.7.0.Tobias Geerinckx-Rice
* gnu/packages/audio.scm (bs1770gain): Update to 0.7.0.
2020-06-03gnu: iw: Use CC-FOR-TARGET.Tobias Geerinckx-Rice
* gnu/packages/linux.scm (iw)[arguments]: Use CC-FOR-TARGET.
2020-06-03gnu: net-tools: Fix cross-compilation.Tobias Geerinckx-Rice
* gnu/packages/linux.scm (net-tools)[arguments]: Use CC-FOR-TARGET.
2020-06-03gnu: lemonbar: Fix cross-compilation.Tobias Geerinckx-Rice
* gnu/packages/wm.scm (lemonbar)[arguments]: Use CC-FOR-TARGET.
2020-06-03gnu: inxi-minimal: Update to 3.1.01-1.Tobias Geerinckx-Rice
* gnu/packages/admin.scm (inxi-minimal): Update to 3.1.01-1.
2020-06-03gnu: acpica: Update to 20200528.Tobias Geerinckx-Rice
* gnu/packages/admin.scm (acpica): Update to 20200528.
2020-06-03gnu: blktrace: Prepare for cross-compilation.Tobias Geerinckx-Rice
* gnu/packages/linux.scm (blktrace)[arguments]: Use CC-FOR-TARGET.
2020-06-03gnu: mdadm: Actually cross-compile.Tobias Geerinckx-Rice
* gnu/packages/linux.scm (mdadm)[arguments]: Use CC-FOR-TARGET.
2020-06-03gnu: hdparm: Fix cross-compilation.Tobias Geerinckx-Rice
* gnu/packages/linux.scm (hdparm)[arguments]: Use CC-FOR-TARGET. Don't strip the binary during the build phase.
2020-06-03gnu: mbpfan: Fix cross-compilation.Tobias Geerinckx-Rice
* gnu/packages/linux.scm (mbpfan)[arguments]: Use CC-FOR-TARGET.