diff options
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 31 |
1 files changed, 31 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 22cbf14099..99f3c467d1 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -8829,3 +8829,34 @@ contains high-performing functions operating on rows and columns of are optimized per data type and for subsetted calculations such that both memory usage and processing time is minimized.") (license license:expat))) + +(define-public r-mscoreutils + (package + (name "r-mscoreutils") + (version "1.2.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "MsCoreUtils" version)) + (sha256 + (base32 + "0fa3bcf2cmzf5y8wjs7pnzs26qwgqnrrl4hj4sa4fp9kv8z80630")))) + (properties `((upstream-name . "MsCoreUtils"))) + (build-system r-build-system) + (propagated-inputs + `(("r-mass" ,r-mass) + ("r-rcpp" ,r-rcpp) + ("r-s4vectors" ,r-s4vectors))) + (native-inputs + `(("r-knitr" ,r-knitr))) + (home-page "https://github.com/RforMassSpectrometry/MsCoreUtils") + (synopsis "Core utils for mass spectrometry data") + (description + "This package defines low-level functions for mass spectrometry data and +is independent of any high-level data structures. These functions include +mass spectra processing functions (noise estimation, smoothing, binning), +quantitative aggregation functions (median polish, robust summarisation, +etc.), missing data imputation, data normalisation (quantiles, vsn, etc.) as +well as misc helper functions, that are used across high-level data structure +within the R for Mass Spectrometry packages.") + (license license:artistic2.0))) |