diff options
Diffstat (limited to 'gnu/packages')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 38 |
1 files changed, 38 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 2161a162ab..55d397e5cf 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -3004,6 +3004,44 @@ testing. The package also provides functions for the visualization and exploration of the results.") (license license:gpl3+))) +(define-public r-diffcyt + (package + (name "r-diffcyt") + (version "1.14.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "diffcyt" version)) + (sha256 + (base32 "1yc9mlc0ifb7h6rzskq97bsdq1kwdp5qq9l9mciwyxf6yjkmv5ni")))) + (properties `((upstream-name . "diffcyt"))) + (build-system r-build-system) + (propagated-inputs + (list r-circlize + r-complexheatmap + r-dplyr + r-edger + r-flowcore + r-flowsom + r-limma + r-lme4 + r-magrittr + r-multcomp + r-reshape2 + r-s4vectors + r-summarizedexperiment + r-tidyr)) + (native-inputs (list r-knitr)) + (home-page "https://github.com/lmweber/diffcyt") + (synopsis "Differential discovery in high-dimensional cytometry") + (description + "This package provides statistical methods for differential discovery +analyses in high-dimensional cytometry data (including flow cytometry, mass +cytometry or CyTOF, and oligonucleotide-tagged cytometry), based on a +combination of high-resolution clustering and empirical Bayes moderated tests +adapted from transcriptomics.") + (license license:expat))) + (define-public r-dirichletmultinomial (package (name "r-dirichletmultinomial") |