diff options
Diffstat (limited to 'gnu/packages/statistics.scm')
| -rw-r--r-- | gnu/packages/statistics.scm | 105 |
1 files changed, 60 insertions, 45 deletions
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index 5069ef7c5d..51f5ad91b1 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/packages/statistics.scm @@ -361,14 +361,14 @@ k-nearest neighbour, Learning Vector Quantization and Self-Organizing Maps.") (define-public r-cluster (package (name "r-cluster") - (version "2.0.7") + (version "2.0.7-1") (source (origin (method url-fetch) (uri (cran-uri "cluster" version)) (sha256 (base32 - "0nf2hnsv5rhw6399b4gk1rj5c8hfc6ajfnkh3qbwfx3cz4asrg45")))) + "1grxbifbc4nwig25dmjgkympnbzb4al0w6k1c0ibdhpk1h4l20di")))) (build-system r-build-system) (inputs `(("gfortran" ,gfortran))) @@ -402,14 +402,14 @@ code for possible problems.") (define-public r-foreign (package (name "r-foreign") - (version "0.8-69") + (version "0.8-70") (source (origin (method url-fetch) (uri (cran-uri "foreign" version)) (sha256 (base32 - "0s1lxmd85dd0kxx8hwk02w9l7pmpk4bpy7787fbyh2dbq5g9ys0k")))) + "11mql8q3i1q593dvd351fhvkvfab25li80d1ahl4xjjzy52qdkc6")))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/foreign") (synopsis "Read data stored by other statistics software") @@ -488,14 +488,14 @@ and operations on them using LAPACK and SuiteSparse.") (define-public r-nlme (package (name "r-nlme") - (version "3.1-131.1") + (version "3.1-137") (source (origin (method url-fetch) (uri (cran-uri "nlme" version)) (sha256 (base32 - "1xafi670a9jzb52kqxkacxfmy0viac3aql5byfq86kgkgla2sg0y")))) + "11vyxxc0n36vb8d8g02zr0402ymicvbifwdsqm7gy9iqqnwrn101")))) (build-system r-build-system) (propagated-inputs `(("r-lattice" ,r-lattice))) @@ -593,14 +593,14 @@ analysis.") (define-public r-survival (package (name "r-survival") - (version "2.41-3") + (version "2.42-3") (source (origin (method url-fetch) (uri (cran-uri "survival" version)) (sha256 (base32 - "07cnr0hnki6ybbjll54l4s5lllhk19vni5f8m0mvsfp99ls7qygk")))) + "15pasbfzmg2r5bfpsadp9ia4cpybqz6n1kwm7ma02ykzf7bk4xx0")))) (build-system r-build-system) (propagated-inputs `(("r-matrix" ,r-matrix))) @@ -2694,13 +2694,13 @@ a column in data frame.") (define-public r-rsqlite (package (name "r-rsqlite") - (version "2.0") + (version "2.1.0") (source (origin (method url-fetch) (uri (cran-uri "RSQLite" version)) (sha256 (base32 - "1xpg1i1jkzkzv44k512k90c2vvl960pl2d4a3spwcha6yclyc3vz")))) + "0hknfqcgijdapx1ryy20zy68qmm8wsb1hjx4n4hmkgl552z82q5d")))) (properties `((upstream-name . "RSQLite"))) (build-system r-build-system) (propagated-inputs @@ -2766,13 +2766,13 @@ ldap, and also supports cookies, redirects, authentication, etc.") (define-public r-xml (package (name "r-xml") - (version "3.98-1.10") + (version "3.98-1.11") (source (origin (method url-fetch) (uri (cran-uri "XML" version)) (sha256 (base32 - "1faza9bbllp67lf1yv1sllxc3iv8llz52m9diazhq322iqbh97m1")))) + "18izvlg2x9mzr6yb3yf02ghwbyn00frki3av4lpc44r22m4djnsh")))) (properties `((upstream-name . "XML"))) (build-system r-build-system) @@ -2820,28 +2820,17 @@ plotted and compared with the asymptotic curve.") (define-public r-lambda-r (package (name "r-lambda-r") - (version "1.2") + (version "1.2.2") (source (origin (method url-fetch) (uri (cran-uri "lambda.r" version)) (sha256 (base32 - "0vql32np716dpd0kjn7s7wgawd02ysgp2a5il4kb19nlw661ii3x")))) + "05cfaq9dbgdnmmj3d6ggmsw300qgiw8k7f6h6k0ylv63cf3v6pkq")))) (properties `((upstream-name . "lambda.r"))) (build-system r-build-system) - (arguments - `(#:phases - (modify-phases %standard-phases - (add-after 'check 'delete-test-log - ;; The test report contains time stamps and is not important for - ;; the installed package. - (lambda* (#:key outputs #:allow-other-keys) - (delete-file-recursively - (string-append (assoc-ref outputs "out") - "/site-library/lambda.r/unitTests")) - #t))))) - (native-inputs - `(("r-runit" ,r-runit))) + (propagated-inputs + `(("r-formatr" ,r-formatr))) (home-page "https://cran.r-project.org/web/packages/lambda.r") (synopsis "Functional programming extension for R") (description @@ -2854,13 +2843,13 @@ safety.") (define-public r-futile-options (package (name "r-futile-options") - (version "1.0.0") + (version "1.0.1") (source (origin (method url-fetch) (uri (cran-uri "futile.options" version)) (sha256 (base32 - "1hp82h6xqq5cck67h7lpf22n3j7mg3v1mla5y5ivnzrrb7iyr17f")))) + "0w15agpi88y3qkv6fl72zy2pzyplzgvnj41a4ixhg64mw1sck73s")))) (properties `((upstream-name . "futile.options"))) (build-system r-build-system) @@ -3410,13 +3399,13 @@ want to migrate to S4.") (define-public r-r-oo (package (name "r-r-oo") - (version "1.21.0") + (version "1.22.0") (source (origin (method url-fetch) (uri (cran-uri "R.oo" version)) (sha256 (base32 - "0723gxjazgqq7v3lwnl7axw3brzcnizvhbd71ijkkv8mz31fwp34")))) + "0k6xwy93fpb2p7bs76lzk52br9rv5xnd9524xj8qyazv1132x1n0")))) (properties `((upstream-name . "R.oo"))) (build-system r-build-system) (propagated-inputs @@ -4222,13 +4211,13 @@ series of numeric vectors/matrices and factors.") (define-public r-ztable (package (name "r-ztable") - (version "0.1.5") + (version "0.1.8") (source (origin (method url-fetch) (uri (cran-uri "ztable" version)) (sha256 (base32 - "1jfqnqy9544gfvz3bsb48v4177nwp4b4n9l2743asq8sbq305b5r")))) + "1hk5k9614n52dpfrhdws06w4gvwhnz8q47x4cwxx88qmrzm8z2m3")))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/ztable") (synopsis "Zebra-striped tables in LaTeX and HTML formats for R") @@ -4281,14 +4270,14 @@ closely-packed, non-overlapping points.") (define-public r-sourcetools (package (name "r-sourcetools") - (version "0.1.6") + (version "0.1.7") (source (origin (method url-fetch) (uri (cran-uri "sourcetools" version)) (sha256 (base32 - "0l8c6fql82cb246qh7hfgxb4s35qn0qfgy6dzvkx0zkz1cpqvx69")))) + "1jnjir0q2dj724f1mjm6p5h77yzyx6xcqy9r2g7gmcxkxw349627")))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/sourcetools") (synopsis "Tools for reading, tokenizing and parsing R code") @@ -4697,14 +4686,14 @@ can be efficiently implemented directly in the R language.") (define-public r-robustbase (package (name "r-robustbase") - (version "0.92-8") + (version "0.93-0") (source (origin (method url-fetch) (uri (cran-uri "robustbase" version)) (sha256 (base32 - "080ynchq8pvhnmbivj4fp74n0x9lyr9923sg0s9gq5irgm68kgxw")))) + "130pzibn5cb8mycv8byc6npzcpddghz8m7jqwk15qmx4g3cj8zgy")))) (build-system r-build-system) (inputs `(("gfortran" ,gfortran))) @@ -5071,14 +5060,14 @@ algorithms.") (define-public r-lme4 (package (name "r-lme4") - (version "1.1-16") + (version "1.1-17") (source (origin (method url-fetch) (uri (cran-uri "lme4" version)) (sha256 (base32 - "0p5x9ki4dq8058mc7k9wdnlh60z1xa3wk2nmf71wl7w59m4szh92")))) + "0czwdy1s8h3slaw73pz0h8qmqczf5135fz6i46i2dv1ql2pbq49x")))) (build-system r-build-system) (native-inputs `(("r-rcpp" ,r-rcpp) @@ -5123,24 +5112,50 @@ modification of F-tests for linear mixed effects models and a parametric bootstrap test for generalized linear mixed models.") (license license:gpl2+))) +(define-public r-cardata + (package + (name "r-cardata") + (version "3.0-1") + (source + (origin + (method url-fetch) + (uri (cran-uri "carData" version)) + (sha256 + (base32 + "193pdwgw6gk19v7swk1kwphg3vqdmpsgi555g9nyz93sa39j7r8j")))) + (properties `((upstream-name . "carData"))) + (build-system r-build-system) + (home-page "https://r-forge.r-project.org/projects/car/") + (synopsis "Data Sets for the book Companion to Applied Regression") + (description + "This package provides datasets to accompany J. Fox and S. Weisberg, An R +Companion to Applied Regression, Third Edition, Sage.") + (license license:gpl2+))) + (define-public r-car (package (name "r-car") - (version "2.1-6") + (version "3.0-0") (source (origin (method url-fetch) (uri (cran-uri "car" version)) (sha256 (base32 - "14l4d9j87xnb0bz2wgqqbxnlnbcdfb5vx2fw6kdxj91kyrk6lhnj")))) + "1ks2jaav8lbxhzw56vpbnysjk3pvpmqh6avd574k0bha1226k81h")))) (build-system r-build-system) (propagated-inputs - `(("r-mass" ,r-mass) + `(("r-abind" ,r-abind) + ("r-cardata" ,r-cardata) + ("r-lme4" ,r-lme4) + ("r-maptools" ,r-maptools) + ("r-mass" ,r-mass) ("r-mgcv" ,r-mgcv) + ("r-nlme" ,r-nlme) ("r-nnet" ,r-nnet) ("r-pbkrtest" ,r-pbkrtest) - ("r-quantreg" ,r-quantreg))) + ("r-quantreg" ,r-quantreg) + ("r-rio" ,r-rio))) (home-page "https://r-forge.r-project.org/projects/car/") (synopsis "Companion to applied regression") (description @@ -5247,14 +5262,14 @@ first and second order derivatives.") (define-public r-sn (package (name "r-sn") - (version "1.5-1") + (version "1.5-2") (source (origin (method url-fetch) (uri (cran-uri "sn" version)) (sha256 (base32 - "0l7qlah6dwkp8jswnr2mn3phlm15naba5zkmv0g5pcqy5ix0gz7w")))) + "16gwr68zzj5v83bqfmzxnzwig3dnjrkxdhs6clri1caqkvrq6aig")))) (build-system r-build-system) (propagated-inputs `(("r-mnormt" ,r-mnormt) |