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Diffstat (limited to 'gnu/packages/bioconductor.scm')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 33 |
1 files changed, 33 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 2423e74b3f..0b3df4f59c 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -6893,3 +6893,36 @@ libraries with a wide spectrum of algorithms. In addition, it offers visualization functions for compound clustering results and chemical structures.") (license license:artistic2.0))) + +(define-public r-bioassayr + (package + (name "r-bioassayr") + (version "1.24.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "bioassayR" version)) + (sha256 + (base32 + "08vxkvxhqnryfbj4dwk3ifb9pn544www9zk2pj9fjbh5xfpwi7zw")))) + (properties `((upstream-name . "bioassayR"))) + (build-system r-build-system) + (propagated-inputs + `(("r-biocgenerics" ,r-biocgenerics) + ("r-chemminer" ,r-chemminer) + ("r-dbi" ,r-dbi) + ("r-matrix" ,r-matrix) + ("r-rjson" ,r-rjson) + ("r-rsqlite" ,r-rsqlite) + ("r-xml" ,r-xml))) + (home-page "https://github.com/TylerBackman/bioassayR") + (synopsis "Cross-target analysis of small molecule bioactivity") + (description + "bioassayR is a computational tool that enables simultaneous analysis of +thousands of bioassay experiments performed over a diverse set of compounds +and biological targets. Unique features include support for large-scale +cross-target analyses of both public and custom bioassays, generation of +@dfn{high throughput screening fingerprints} (HTSFPs), and an optional +preloaded database that provides access to a substantial portion of publicly +available bioactivity data.") + (license license:artistic2.0))) |