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-rw-r--r--gnu/packages/bioconductor.scm4
1 files changed, 2 insertions, 2 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 8dfd351725..6e534248bd 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -17019,14 +17019,14 @@ datasets.")
(define-public r-annotatr
(package
(name "r-annotatr")
- (version "1.26.0")
+ (version "1.28.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "annotatr" version))
(sha256
(base32
- "1vjbk1vpqjxy9wv2a6sc32yyk0bhkbvdx9hl3vs5yjifwdswh2pw"))))
+ "16nkxnbsmr0y6km794x2iwbkyrkf0svg6ln3qkqnw0a47a3cbm65"))))
(build-system r-build-system)
(propagated-inputs
(list r-annotationdbi
ders, hurd-headers, hurd-minimal) [arguments]: Likewise. * gnu/packages/image-viewers.scm (feh, sxiv)[arguments]: Likewise. * gnu/packages/libcanberra.scm (libcanberra)[arguments]: Likewise. * gnu/packages/linux.scm (bridge-utils, iw, fuse, unionfs-fuse/static, lm-sensors, i2c-tools, xsensors, perf, mdadm, libaio, module-init-tools) [arguments]: Likewise. * gnu/packages/lisp.scm (ccl)[arguments]: Likewise. * gnu/packages/lout.scm (lout)[arguments]: Likewise. * gnu/packages/lua.scm (luajit)[arguments]: Likewise. * gnu/packages/machine-learning.scm (shogun)[arguments]: Likewise. * gnu/packages/mail.scm (exim)[arguments]: Likewise. * gnu/packages/man.scm (man-pages, txt2man)[arguments]: Likewise. * gnu/packages/maths.scm (lapack, superlu-dist, openlibm, openspecfun) [arguments]: Likewise. * gnu/packages/messaging.scm (bitlbee)[arguments]: Likewise. * gnu/packages/mp3.scm (libmad, id3lib, mp3info)[arguments]: Likewise. * gnu/packages/music.scm (solfege)[arguments]: Likewise. * gnu/packages/noweb.scm (noweb)[arguments]: Likewise. * gnu/packages/patchutils.scm (patchutils, quilt, colordiff)[arguments]: Likewise. * gnu/packages/pdf.scm (xpdf, zathura-cb, zathura-ps, zathura-djvu, zathura-pdf-poppler, zathura, podofo, fbida)[arguments]: Likewise. * gnu/packages/perl.scm (perl-file-list, perl-test-harness)[arguments]: Likewise. * gnu/packages/photo.scm (gphoto2)[arguments]: Likewise. * gnu/packages/popt.scm (popt)[arguments]: Likewise. * gnu/packages/pretty-print.scm (source-highlight, astyle)[arguments]: Likewise. * gnu/packages/pumpio.scm (pumpa)[arguments]: Likewise. * gnu/packages/python.scm (python-passlib, python-pycrypto, python2-empy, python-sqlalchemy, python-docopt)[arguments]: Likewise. * gnu/packages/rdf.scm (lrdf)[arguments]: Likewise. * gnu/packages/regex.scm (tre)[arguments]: Likewise. * gnu/packages/rrdtool.scm (rrdtool)[arguments]: Likewise. * gnu/packages/ruby.scm (ruby-2.1, ruby-1.8)[arguments]: Likewise. * gnu/packages/sawfish.scm (sawfish)[arguments]: Likewise. * gnu/packages/scheme.scm (racket)[arguments]: Likewise. * gnu/packages/sdl.scm (guile-sdl)[arguments]: Likewise. * gnu/packages/serveez.scm (serveez)[arguments]: Likewise. * gnu/packages/skribilo.scm (skribilo)[arguments]: Likewise. * gnu/packages/smalltalk.scm (smalltalk)[arguments]: Likewise. * gnu/packages/suckless.scm (dmenu, slock)[arguments]: Likewise. * gnu/packages/tcl.scm (expect)[arguments]: Likewise. * gnu/packages/telephony.scm (commoncpp)[arguments]: Likewise. * gnu/packages/textutils.scm (recode, libgtextutils)[arguments]: Likewise. * gnu/packages/time.scm (time)[arguments]: Likewise. * gnu/packages/tor.scm (privoxy)[arguments]: Likewise. * gnu/packages/uucp.scm (uucp)[arguments]: Likewise. * gnu/packages/video.scm (libdvdnav-4)[arguments]: Likewise. * gnu/packages/web-browsers.scm (lynx)[arguments]: Likewise. * gnu/packages/web.scm (tinyproxy)[arguments]: Likewise. * gnu/packages/wicd.scm (wicd)[arguments]: Likewise. * gnu/packages/wm.scm (bspwm)[arguments]: Likewise. * gnu/packages/xdisorg.scm (sxhkd, xcape)[arguments]: Likewise. * gnu/packages/xfce.scm (xfconf)[arguments]: Likewise. * gnu/packages/xfig.scm (transfig)[arguments]: Likewise. * gnu/packages/xorg.scm (imake)[arguments]: Likewise. Kei Kebreau 2016-04-14gnu: packages: Use 'search-patches' everywhere....* gnu/packages/abiword.scm: Use 'search-patches' for 'patches' field. * gnu/packages/acl.scm: Likewise. * gnu/packages/admin.scm: Likewise. * gnu/packages/algebra.scm: Likewise. * gnu/packages/animation.scm: Likewise. * gnu/packages/apr.scm: Likewise. * gnu/packages/audacity.scm: Likewise. * gnu/packages/audio.scm: Likewise. * gnu/packages/autotools.scm: Likewise. * gnu/packages/avahi.scm: Likewise. * gnu/packages/backup.scm: Likewise. * gnu/packages/base.scm: Likewise. * gnu/packages/bash.scm: Likewise. * gnu/packages/bioinformatics.scm: Likewise. * gnu/packages/cdrom.scm: Likewise. * gnu/packages/ci.scm: Likewise. * gnu/packages/cmake.scm: Likewise. * gnu/packages/cpio.scm: Likewise. * gnu/packages/cross-base.scm: Likewise. * gnu/packages/dico.scm: Likewise. * gnu/packages/doxygen.scm: Likewise. * gnu/packages/ebook.scm: Likewise. * gnu/packages/elf.scm: Likewise. * gnu/packages/emacs.scm: Likewise. * gnu/packages/engineering.scm: Likewise. * gnu/packages/firmware.scm: Likewise. * gnu/packages/flashing-tools.scm: Likewise. * gnu/packages/fltk.scm: Likewise. * gnu/packages/ftp.scm: Likewise. * gnu/packages/games.scm: Likewise. * gnu/packages/gawk.scm: Likewise. * gnu/packages/gcc.scm: Likewise. * gnu/packages/gd.scm: Likewise. * gnu/packages/ghostscript.scm: Likewise. * gnu/packages/glib.scm: Likewise. * gnu/packages/gnome.scm: Likewise. * gnu/packages/gnucash.scm: Likewise. * gnu/packages/gnunet.scm: Likewise. * gnu/packages/gnupg.scm: Likewise. * gnu/packages/gnuzilla.scm: Likewise. * gnu/packages/graphics.scm: Likewise. * gnu/packages/grub.scm: Likewise. * gnu/packages/gtk.scm: Likewise. * gnu/packages/guile.scm: Likewise. * gnu/packages/icu4c.scm: Likewise. * gnu/packages/idutils.scm: Likewise. * gnu/packages/image.scm: Likewise. * gnu/packages/imagemagick.scm: Likewise. * gnu/packages/irc.scm: Likewise. * gnu/packages/ldc.scm: Likewise. * gnu/packages/libcanberra.scm: Likewise. * gnu/packages/libevent.scm: Likewise. * gnu/packages/libreoffice.scm: Likewise. * gnu/packages/libunwind.scm: Likewise. * gnu/packages/libusb.scm: Likewise. * gnu/packages/linux.scm: Likewise. * gnu/packages/lirc.scm: Likewise. * gnu/packages/llvm.scm: Likewise. * gnu/packages/lsh.scm: Likewise. * gnu/packages/lua.scm: Likewise. * gnu/packages/lxqt.scm: Likewise. * gnu/packages/mail.scm: Likewise. * gnu/packages/maths.scm: Likewise. * gnu/packages/mcrypt.scm: Likewise. * gnu/packages/messaging.scm: Likewise. * gnu/packages/mit-krb5.scm: Likewise. * gnu/packages/mp3.scm: Likewise. * gnu/packages/multiprecision.scm: Likewise. * gnu/packages/music.scm: Likewise. * gnu/packages/ninja.scm: Likewise. * gnu/packages/nvi.scm: Likewise. * gnu/packages/ocaml.scm: Likewise. * gnu/packages/orpheus.scm: Likewise. * gnu/packages/ots.scm: Likewise. * gnu/packages/parallel.scm: Likewise. * gnu/packages/patchutils.scm: Likewise. * gnu/packages/pcre.scm: Likewise. * gnu/packages/pdf.scm: Likewise. * gnu/packages/perl.scm: Likewise. * gnu/packages/plotutils.scm: Likewise. * gnu/packages/polkit.scm: Likewise. * gnu/packages/pulseaudio.scm: Likewise. * gnu/packages/python.scm: Likewise. * gnu/packages/qemu.scm: Likewise. * gnu/packages/qt.scm: Likewise. * gnu/packages/ratpoison.scm: Likewise. * gnu/packages/rdf.scm: Likewise. * gnu/packages/readline.scm: Likewise. * gnu/packages/rush.scm: Likewise. * gnu/packages/scheme.scm: Likewise. * gnu/packages/screen.scm: Likewise. * gnu/packages/sdl.scm: Likewise. * gnu/packages/slim.scm: Likewise. * gnu/packages/ssh.scm: Likewise. * gnu/packages/tcl.scm: Likewise. * gnu/packages/tcsh.scm: Likewise. * gnu/packages/texinfo.scm: Likewise. * gnu/packages/tls.scm: Likewise. * gnu/packages/tor.scm: Likewise. * gnu/packages/tv.scm: Likewise. * gnu/packages/valgrind.scm: Likewise. * gnu/packages/version-control.scm: Likewise. * gnu/packages/video.scm: Likewise. * gnu/packages/vpn.scm: Likewise. * gnu/packages/vtk.scm: Likewise. * gnu/packages/w3m.scm: Likewise. * gnu/packages/web.scm: Likewise. * gnu/packages/wicd.scm: Likewise. * gnu/packages/wm.scm: Likewise. * gnu/packages/xdisorg.scm: Likewise. * gnu/packages/xfce.scm: Likewise. * gnu/packages/xiph.scm: Likewise. * gnu/packages/xml.scm: Likewise. * gnu/packages/xorg.scm: Likewise. * gnu/packages/zip.scm: Likewise. Alex Kost 2015-05-07gnu: apr-util: Use system expat library....* gnu/packages/apr.scm: Import (guix licenses) with prefix "l:". (apr)[license]: Adapt to license prefix. (apr-util)[propagated-inputs]: Add expat. [arguments]: Pass --with-expat to configure. [license]: Adapt to license prefix. Mark H Weaver 2015-05-07gnu: apr: Update to 1.5.2....* gnu/packages/apr.scm (apr): Update to 1.5.2. Mark H Weaver 2015-01-27gnu: apr-util: Correct hash....* gnu/packages/apr.scm (apr-util): Correct hash. Manolis Ragkousis 2015-01-27gnu: apr: Update to 1.5.4....* gnu/packages/apr.scm (apr-util): Update to 1.5.4 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Manolis Ragkousis 2015-01-07gnu: Make libtool and libltdl completely separate....* gnu/packages/autotools.scm (libtool)[outputs]: Remove. [arguments]: Remove 'if' around arguments. Add #:configure-flags. * gnu/packages/apr.scm (apr)[inputs]: Change libtool to libltdl. * gnu/packages/fontutils.scm (libuninameslist)[native-inputs]: Remove "libtool-bin". * gnu/packages/global.scm (global): Change libtool to libltdl. * gnu/packages/gnunet.scm (libextractor, gnunet): Likewise. * gnu/packages/graphviz.scm (graphviz): Likewise. * gnu/packages/libcanberra.scm (libcanberra): Likewise. * gnu/packages/libevent.scm (libuv)[native-inputs]: Remove "bin" part for libtool. * gnu/packages/mail.scm (mailutils): Change libtool to libltdl. (libetpan): Remove "bin" part for libtool. * gnu/packages/mp3.scm (libmp3splt): Change libtool to libltdl. * gnu/packages/openldap.scm (openldap): Remove "bin" part of libtool. Move it from 'inputs' to 'native-inputs'. * gnu/packages/photo.scm (libgphoto2): Change libtool to libltdl. * gnu/packages/pulseaudio.scm (pulseaudio): Likewise. * gnu/packages/ssh.scm (guile-ssh): Remove "bin" part of libtool. * gnu/packages/web.scm (libpsl): Likewise. * gnu/packages/weechat.scm (weechat): Move libtool to 'native-inputs' and add libltdl to 'inputs'. Ludovic Courtès 2014-10-26gnu: Some cleanup based on lint checkers....* gnu/packages/admin.scm, gnu/packages/aidc.scm, gnu/packages/algebra.scm, gnu/packages/apr.scm, gnu/packages/avahi.scm, gnu/packages/backup.scm, gnu/packages/base.scm, gnu/packages/calcurse.scm, gnu/packages/cdrom.scm, gnu/packages/check.scm, gnu/packages/compression.scm, gnu/packages/cook.scm, gnu/packages/crypto.scm, gnu/packages/cryptsetup.scm, gnu/packages/curl.scm, gnu/packages/cyrus-sasl.scm, gnu/packages/databases.scm, gnu/packages/doxygen.scm, gnu/packages/dwm.scm, gnu/packages/elf.scm, gnu/packages/emacs.scm, gnu/packages/feh.scm, gnu/packages/file.scm, gnu/packages/fish.scm, gnu/packages/flex.scm, gnu/packages/fltk.scm, gnu/packages/fontutils.scm, gnu/packages/games.scm, gnu/packages/gcal.scm, gnu/packages/gcc.scm, gnu/packages/geeqie.scm, gnu/packages/ghostscript.scm, gnu/packages/gimp.scm, gnu/packages/gl.scm, gnu/packages/glib.scm, gnu/packages/gnome.scm, gnu/packages/gnunet.scm, gnu/packages/gnupg.scm, gnu/packages/gperf.scm, gnu/packages/grub.scm, gnu/packages/gsasl.scm, gnu/packages/gtk.scm, gnu/packages/guile-wm.scm, gnu/packages/guile.scm, gnu/packages/hurd.scm, gnu/packages/icu4c.scm, gnu/packages/image.scm, gnu/packages/imagemagick.scm, gnu/packages/irssi.scm, gnu/packages/kde.scm, gnu/packages/libdaemon.scm, gnu/packages/libevent.scm, gnu/packages/libidn.scm, gnu/packages/libusb.scm, gnu/packages/linux.scm, gnu/packages/lout.scm, gnu/packages/lsh.scm, gnu/packages/lsof.scm, gnu/packages/lua.scm, gnu/packages/maths.scm, gnu/packages/mcrypt.scm, gnu/packages/mp3.scm, gnu/packages/netpbm.scm, gnu/packages/noweb.scm, gnu/packages/ocaml.scm, gnu/packages/openssl.scm, gnu/packages/pcre.scm, gnu/packages/pdf.scm, gnu/packages/pkg-config.scm, gnu/packages/pretty-print.scm, gnu/packages/python.scm, gnu/packages/qt.scm, gnu/packages/rsync.scm, gnu/packages/scheme.scm, gnu/packages/scrot.scm, gnu/packages/sdl.scm, gnu/packages/skribilo.scm, gnu/packages/ssh.scm, gnu/packages/stalonetray.scm, gnu/packages/tcl.scm, gnu/packages/tcsh.scm, gnu/packages/telephony.scm, gnu/packages/texlive.scm, gnu/packages/tor.scm, gnu/packages/valgrind.scm, gnu/packages/version-control.scm, gnu/packages/vim.scm, gnu/packages/vpn.scm, gnu/packages/w3m.scm, gnu/packages/web.scm, gnu/packages/wordnet.scm, gnu/packages/xiph.scm, gnu/packages/xml.scm, gnu/packages/xorg.scm, gnu/packages/zile.scm, gnu/packages/zip.scm, gnu/packages/zsh.scm [synopsis, description]: Adjust according to lint checkers. * gnu/packages/fltk.scm (fltk)[source]: Wrap long line in uri. * /gnu/packages/xiph.scm (libogg, libtheora, vorbis-tools)[source]: Same. Eric Bavier 2014-08-16gnu: apr: Disable parallel tests....* gnu/packages/apr.scm (apr): Disable parallel tests. Mark H Weaver 2014-08-16gnu: apr-util: Update to 1.5.3....* gnu/packages/apr.scm (apr-util): Update to 1.5.3. Mark H Weaver 2014-08-16gnu: apr: Update to 1.5.1....* gnu/packages/apr.scm (apr): Update to 1.5.1. Mark H Weaver 2014-07-18gnu: apr-util: Run 'make check' sequentially....* gnu/packages/apr.scm (apr-util)[arguments]: Add #:parallel-tests?. Ludovic Courtès 2014-06-15gnu: apr: Build sequentially....* gnu/packages/apr.scm (apr)[arguments]: New field. Ludovic Courtès