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| -rw-r--r-- | gnu/packages/bioconductor.scm | 29 |
1 files changed, 29 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index bf1bae1254..c27a344311 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -1146,6 +1146,35 @@ from Illumina 450k methylation arrays.") biscuiteer.") (license license:gpl3))) +(define-public r-celldex + (package + (name "r-celldex") + (version "1.4.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "celldex" version 'experiment)) + (sha256 + (base32 "04w60fx3s3wlirmr65nsz6d7ig48j9fzimdr8kbdqv1g80ivdcq1")))) + (properties `((upstream-name . "celldex"))) + (build-system r-build-system) + (propagated-inputs + (list r-annotationdbi + r-annotationhub + r-delayedarray + r-delayedmatrixstats + r-experimenthub + r-s4vectors + r-summarizedexperiment)) + (native-inputs (list r-knitr)) + (home-page "https://github.com/LTLA/celldex") + (synopsis "Reference index for cell types") + (description + "This package provides a collection of reference expression datasets with +curated cell type labels, for use in procedures like automated annotation of +single-cell data or deconvolution of bulk RNA-seq.") + (license license:gpl3))) + (define-public r-chromstardata (package (name "r-chromstardata") |