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author | Ricardo Wurmus <rekado@elephly.net> | 2021-09-07 14:37:59 +0200 |
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committer | Ricardo Wurmus <rekado@elephly.net> | 2021-09-07 14:47:56 +0200 |
commit | 2794024dc276e6472137c33853bbef35eabac186 (patch) | |
tree | 27d492e0cefda42a45e0315fea48c1901e131426 /gnu/packages | |
parent | 9cb08ead85182e074538ee65687eb727b7920dc7 (diff) | |
download | guix-2794024dc276e6472137c33853bbef35eabac186.tar.gz guix-2794024dc276e6472137c33853bbef35eabac186.zip |
gnu: Add r-biomvrcns.
* gnu/packages/bioconductor.scm (r-biomvrcns): New variable.
Diffstat (limited to 'gnu/packages')
-rw-r--r-- | gnu/packages/bioconductor.scm | 28 |
1 files changed, 28 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 577727f336..b6e7c877ff 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -14249,6 +14249,34 @@ design.") design.") (license license:lgpl2.1+))) +(define-public r-biomvrcns + (package + (name "r-biomvrcns") + (version "1.32.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "biomvRCNS" version)) + (sha256 + (base32 + "0wyzj422smr4m9mswzn9inc1sn86pnia7jmd6k28nd2a7fjyrm16")))) + (properties `((upstream-name . "biomvRCNS"))) + (build-system r-build-system) + (propagated-inputs + `(("r-genomicranges" ,r-genomicranges) + ("r-gviz" ,r-gviz) + ("r-iranges" ,r-iranges) + ("r-mvtnorm" ,r-mvtnorm))) + (home-page "https://bioconductor.org/packages/biomvRCNS") + (synopsis "Copy number study and segmentation for multivariate biological data") + (description + "In this package, a @dfn{Hidden Semi Markov Model} (HSMM) and one +homogeneous segmentation model are designed and implemented for segmentation +genomic data, with the aim of assisting in transcripts detection using high +throughput technology like RNA-seq or tiling array, and copy number analysis +using aCGH or sequencing.") + (license license:gpl2+))) + (define-public r-tximeta (package (name "r-tximeta") |