aboutsummaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorLudovic Courtès <ludo@gnu.org>2013-09-03 10:48:52 +0200
committerLudovic Courtès <ludo@gnu.org>2013-09-03 10:48:52 +0200
commitbda44eed939ae251a21ad3cd1337c58e8d349581 (patch)
tree29b53492b4353b67e1f716b2c00fb89ff1dada2c
parent8badfc55588c74dd8890ae5a47d40e2ebe7366df (diff)
downloadguix-bda44eed939ae251a21ad3cd1337c58e8d349581.tar.gz
guix-bda44eed939ae251a21ad3cd1337c58e8d349581.zip
pull: Compile files in the lexicographic order.
* guix/scripts/pull.scm (unpack): Print the name of the file being compiled. Sort the names of files to compile.
Diffstat
-rw-r--r--guix/scripts/pull.scm6
1 files changed, 5 insertions, 1 deletions
diff --git a/guix/scripts/pull.scm b/guix/scripts/pull.scm
index f4135efc99..f3d87a63c0 100644
--- a/guix/scripts/pull.scm
+++ b/guix/scripts/pull.scm
@@ -106,6 +106,8 @@ files."
(when (string-suffix? ".scm" file)
(let ((go (string-append (string-drop-right file 4)
".go")))
+ (format (current-error-port)
+ "compiling '~a'...~%" file)
(compile-file file
#:output-file go
#:opts %auto-compilation-options))))
@@ -114,7 +116,9 @@ files."
;; download), we must build it first to avoid errors since
;; (gnutls) is unavailable.
(cons (string-append out "/guix/build/download.scm")
- (find-files out "\\.scm")))
+
+ ;; Sort the file names to get deterministic results.
+ (sort (find-files out "\\.scm") string<?)))
;; Remove the "fake" (guix config).
(delete-file (string-append out "/guix/config.scm"))
generated by cgit
'> -rw-r--r--gnu/packages/bioinformatics.scm11
-rw-r--r--gnu/packages/build-tools.scm22
-rw-r--r--gnu/packages/calendar.scm26
-rw-r--r--gnu/packages/cdrom.scm2
-rw-r--r--gnu/packages/certs.scm15
-rw-r--r--gnu/packages/check.scm2
-rw-r--r--gnu/packages/cinnamon.scm2
-rw-r--r--gnu/packages/compression.scm2
-rw-r--r--gnu/packages/cran.scm28
-rw-r--r--gnu/packages/crypto.scm2
-rw-r--r--gnu/packages/databases.scm2
-rw-r--r--gnu/packages/django.scm2
-rw-r--r--gnu/packages/dns.scm2
-rw-r--r--gnu/packages/elf.scm19
-rw-r--r--gnu/packages/emacs.scm2
-rw-r--r--gnu/packages/enlightenment.scm2
-rw-r--r--gnu/packages/fonts.scm2
-rw-r--r--gnu/packages/fontutils.scm2
-rw-r--r--gnu/packages/forth.scm2
-rw-r--r--gnu/packages/freedesktop.scm50
-rw-r--r--gnu/packages/fvwm.scm2
-rw-r--r--gnu/packages/games.scm72
-rw-r--r--gnu/packages/gl.scm16
-rw-r--r--gnu/packages/gnome.scm60
-rw-r--r--gnu/packages/gnunet.scm2
-rw-r--r--gnu/packages/gnupg.scm2
-rw-r--r--gnu/packages/gnuzilla.scm16
-rw-r--r--gnu/packages/gtk.scm13
-rw-r--r--gnu/packages/guile-wm.scm2
-rw-r--r--gnu/packages/guile.scm2
-rw-r--r--gnu/packages/haskell-check.scm2
-rw-r--r--gnu/packages/haskell-crypto.scm2
-rw-r--r--gnu/packages/haskell.scm2
-rw-r--r--gnu/packages/image-viewers.scm2
-rw-r--r--gnu/packages/image.scm6
-rw-r--r--gnu/packages/irc.scm2
-rw-r--r--gnu/packages/language.scm2
-rw-r--r--gnu/packages/libcanberra.scm2
-rw-r--r--gnu/packages/linux.scm18
-rw-r--r--gnu/packages/lisp.scm2
-rw-r--r--gnu/packages/lolcode.scm2
-rw-r--r--gnu/packages/lxde.scm2
-rw-r--r--gnu/packages/lxqt.scm2
-rw-r--r--gnu/packages/mail.scm2
-rw-r--r--gnu/packages/markup.scm2
-rw-r--r--gnu/packages/mate.scm2
-rw-r--r--gnu/packages/maths.scm2
-rw-r--r--gnu/packages/mc.scm2
-rw-r--r--gnu/packages/messaging.scm2
-rw-r--r--gnu/packages/music.scm2
-rw-r--r--gnu/packages/ncurses.scm2
-rw-r--r--gnu/packages/networking.scm2
-rw-r--r--gnu/packages/nickle.scm2
-rw-r--r--gnu/packages/ninja.scm2
-rw-r--r--gnu/packages/openbox.scm2
-rw-r--r--gnu/packages/patches/giflib-make-reallocarray-private.patch120
-rw-r--r--gnu/packages/patches/gnome-todo-libical-compat.patch17
-rw-r--r--gnu/packages/patches/gtk2-fix-failing-test.patch39
-rw-r--r--gnu/packages/patches/json-glib-fix-tests-32bit.patch174
-rw-r--r--gnu/packages/pciutils.scm5
-rw-r--r--gnu/packages/pdf.scm2
-rw-r--r--gnu/packages/perl-check.scm2
-rw-r--r--gnu/packages/perl.scm2
-rw-r--r--gnu/packages/python-crypto.scm2
-rw-r--r--gnu/packages/python-web.scm2
-rw-r--r--gnu/packages/python.scm16
-rw-r--r--gnu/packages/qt.scm2
-rw-r--r--gnu/packages/ruby.scm6
-rw-r--r--gnu/packages/rust.scm2
-rw-r--r--gnu/packages/scheme.scm2
-rw-r--r--gnu/packages/serialization.scm2
-rw-r--r--gnu/packages/shells.scm2
-rw-r--r--gnu/packages/ssh.scm2
-rw-r--r--gnu/packages/suckless.scm2
-rw-r--r--gnu/packages/tbb.scm2
-rw-r--r--gnu/packages/telephony.scm2
-rw-r--r--gnu/packages/text-editors.scm2
-rw-r--r--gnu/packages/textutils.scm2
-rw-r--r--gnu/packages/time.scm2
-rw-r--r--gnu/packages/tls.scm2
-rw-r--r--gnu/packages/tor.scm2
-rw-r--r--gnu/packages/version-control.scm2
-rw-r--r--gnu/packages/video.scm6
-rw-r--r--gnu/packages/vim.scm2
-rw-r--r--gnu/packages/web.scm9
-rw-r--r--gnu/packages/wm.scm2
-rw-r--r--gnu/packages/xdisorg.scm14
-rw-r--r--gnu/packages/xfce.scm2
-rw-r--r--gnu/packages/xiph.scm4
-rw-r--r--gnu/packages/xml.scm2
-rw-r--r--gnu/packages/xorg.scm14
-rw-r--r--gnu/services/certbot.scm2
-rw-r--r--gnu/services/desktop.scm2
-rw-r--r--gnu/services/version-control.scm2
-rw-r--r--gnu/services/web.scm2
101 files changed, 695 insertions, 306 deletions
diff --git a/gnu/local.mk b/gnu/local.mk
index 902f2cf9e3..d444495d41 100644
--- a/gnu/local.mk
+++ b/gnu/local.mk
@@ -698,6 +698,7 @@ dist_patch_DATA = \
%D%/packages/patches/ghostscript-no-header-uuid.patch \
%D%/packages/patches/ghostscript-no-header-creationdate.patch \
%D%/packages/patches/ghostscript-runpath.patch \
+ %D%/packages/patches/giflib-make-reallocarray-private.patch \
%D%/packages/patches/gimp-CVE-2017-17784.patch \
%D%/packages/patches/gimp-CVE-2017-17785.patch \
%D%/packages/patches/gimp-CVE-2017-17786.patch \
@@ -725,6 +726,7 @@ dist_patch_DATA = \
%D%/packages/patches/glog-gcc-5-demangling.patch \
%D%/packages/patches/gmp-arm-asm-nothumb.patch \
%D%/packages/patches/gmp-faulty-test.patch \
+ %D%/packages/patches/gnome-todo-libical-compat.patch \
%D%/packages/patches/gnome-tweak-tool-search-paths.patch \
%D%/packages/patches/gnucash-price-quotes-perl.patch \
%D%/packages/patches/gnutls-skip-trust-store-test.patch \
@@ -751,7 +753,6 @@ dist_patch_DATA = \
%D%/packages/patches/gtk2-respect-GUIX_GTK2_PATH.patch \
%D%/packages/patches/gtk2-respect-GUIX_GTK2_IM_MODULE_FILE.patch \
%D%/packages/patches/gtk2-theme-paths.patch \
- %D%/packages/patches/gtk2-fix-failing-test.patch \
%D%/packages/patches/gtk3-respect-GUIX_GTK3_PATH.patch \
%D%/packages/patches/gtk3-respect-GUIX_GTK3_IM_MODULE_FILE.patch \
%D%/packages/patches/gtkglext-disable-disable-deprecated.patch \
@@ -793,6 +794,7 @@ dist_patch_DATA = \
%D%/packages/patches/java-xerces-xjavac_taskdef.patch \
%D%/packages/patches/jemalloc-arm-address-bits.patch \
%D%/packages/patches/jbig2dec-ignore-testtest.patch \
+ %D%/packages/patches/json-glib-fix-tests-32bit.patch \
%D%/packages/patches/jq-CVE-2015-8863.patch \
%D%/packages/patches/kdbusaddons-kinit-file-name.patch \
%D%/packages/patches/khmer-use-libraries.patch \
diff --git a/gnu/packages/accessibility.scm b/gnu/packages/accessibility.scm
index f2cbfc480b..c9d9b099c5 100644
--- a/gnu/packages/accessibility.scm
+++ b/gnu/packages/accessibility.scm
@@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2017 ng0 <ng0@infotropique.org>
+;;; Copyright © 2017 Nils Gillmann <ng0@n0.is>
;;; Copyright © 2017 Stefan Reichör <stefan@xsteve.at>
;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;;
diff --git a/gnu/packages/admin.scm b/gnu/packages/admin.scm
index 4755b3d7b7..3269a117eb 100644
--- a/gnu/packages/admin.scm
+++ b/gnu/packages/admin.scm
@@ -12,7 +12,7 @@
;;; Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016 Peter Feigl <peter.feigl@nexoid.at>
;;; Copyright © 2016 John J. Foerch <jjfoerch@earthlink.net>
-;;; Copyright © 2016, 2017 ng0 <contact.ng0@cryptolab.net>
+;;; Copyright © 2016, 2017 Nils Gillmann <ng0@n0.is>
;;; Copyright © 2016, 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2016 John Darrington <jmd@gnu.org>
;;; Copyright © 2017 Ben Sturmfels <ben@sturm.com.au>
diff --git a/gnu/packages/audio.scm b/gnu/packages/audio.scm
index 82fadfe175..e34c1a9f2c 100644
--- a/gnu/packages/audio.scm
+++ b/gnu/packages/audio.scm
@@ -6,7 +6,7 @@
;;; Copyright © 2015, 2016 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016, 2017 Alex Griffin <a@ajgrf.com>
-;;; Copyright © 2016 ng0 <ng0@we.make.ritual.n0.is>
+;;; Copyright © 2016 Nils Gillmann <ng0@n0.is>
;;; Copyright © 2016 Lukas Gradl <lgradl@openmailbox.org>
;;; Copyright © 2016, 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018 Oleg Pykhalov <go.wigust@gmail.com>
diff --git a/gnu/packages/autotools.scm b/gnu/packages/autotools.scm
index b86c1c835a..913caa2c20 100644
--- a/gnu/packages/autotools.scm
+++ b/gnu/packages/autotools.scm
@@ -5,7 +5,7 @@
;;; Copyright © 2014 Manolis Fragkiskos Ragkousis <manolis837@gmail.com>
;;; Copyright © 2015, 2017, 2018 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2016 David Thompson <davet@gnu.org>
-;;; Copyright © 2017 ng0 <ng0@infotropique.org>
+;;; Copyright © 2017 Nils Gillmann <ng0@n0.is>
;;; Copyright © 2017 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018 Ricardo Wurmus <rekado@elephly.net>
diff --git a/gnu/packages/base.scm b/gnu/packages/base.scm
index c6b21e725d..f53dee73ec 100644
--- a/gnu/packages/base.scm
+++ b/gnu/packages/base.scm
@@ -1087,7 +1087,7 @@ command.")
(define-public tzdata
(package
(name "tzdata")
- (version "2017c")
+ (version "2018c")
(source (origin
(method url-fetch)
(uri (string-append
@@ -1095,7 +1095,7 @@ command.")
version ".tar.gz"))
(sha256
(base32
- "02yrrfj0p7ar885ja41ylijzbr8wc6kz6kzlw8c670i9m693ym6n"))))
+ "1xik57rdi7kqa0wb5jbz7vyjyxpr88lw1g4kscj0ylpgnzjc6998"))))
(build-system gnu-build-system)
(arguments
'(#:tests? #f
@@ -1103,10 +1103,8 @@ command.")
(tmp (getenv "TMPDIR")))
(list (string-append "TOPDIR=" out)
(string-append "TZDIR=" out "/share/zoneinfo")
-
- ;; Discard zic, dump, and tzselect, already
- ;; provided by glibc.
- (string-append "ETCDIR=" tmp "/etc")
+ (string-append "TZDEFAULT=" out
+ "/share/zoneinfo/localtime")
;; Likewise for the C library routines.
(string-append "LIBDIR=" tmp "/lib")
@@ -1127,6 +1125,9 @@ command.")
(lambda* (#:key outputs #:allow-other-keys)
;; Move data in the right place.
(let ((out (assoc-ref outputs "out")))
+ ;; Discard zic, dump, and tzselect, already
+ ;; provided by glibc.
+ (delete-file-recursively (string-append out "/usr"))
(symlink (string-append out "/share/zoneinfo")
(string-append out "/share/zoneinfo/posix"))
(delete-file-recursively
@@ -1144,7 +1145,7 @@ command.")
version ".tar.gz"))
(sha256
(base32
- "1dvrq0b2hz7cjqdyd7x21wpy4qcng3rvysr61ij0c2g64fyb9s41"))))))
+ "0rg6s1vlgwd8sjhla55hx2h5m2xbx0shm347pkbg4vsaz707zyii"))))))
(home-page "https://www.iana.org/time-zones")
(synopsis "Database of current and historical time zones")
(description "The Time Zone Database (often called tz or zoneinfo)
@@ -1170,6 +1171,45 @@ and daylight-saving rules.")
(sha256
(base32
"02yrrfj0p7ar885ja41ylijzbr8wc6kz6kzlw8c670i9m693ym6n"))))
+ (arguments
+ '(#:tests? #f
+ #:make-flags (let ((out (assoc-ref %outputs "out"))
+ (tmp (getenv "TMPDIR")))
+ (list (string-append "TOPDIR=" out)
+ (string-append "TZDIR=" out "/share/zoneinfo")
+
+ ;; Discard zic, dump, and tzselect, already
+ ;; provided by glibc.
+ (string-append "ETCDIR=" tmp "/etc")
+
+ ;; Likewise for the C library routines.
+ (string-append "LIBDIR=" tmp "/lib")
+ (string-append "MANDIR=" tmp "/man")
+
+ "AWK=awk"
+ "CC=gcc"))
+ #:modules ((guix build utils)
+ (guix build gnu-build-system)
+ (srfi srfi-1))
+ #:phases
+ (modify-phases %standard-phases
+ (replace 'unpack
+ (lambda* (#:key source inputs #:allow-other-keys)
+ (and (zero? (system* "tar" "xvf" source))
+ (zero? (system* "tar" "xvf" (assoc-ref inputs "tzcode"))))))
+ (add-after 'install 'post-install
+ (lambda* (#:key outputs #:allow-other-keys)
+ ;; Move data in the right place.
+ (let ((out (assoc-ref outputs "out")))
+ (symlink (string-append out "/share/zoneinfo")
+ (string-append out "/share/zoneinfo/posix"))
+ (delete-file-recursively
+ (string-append out "/share/zoneinfo-posix"))
+ (copy-recursively (string-append out "/share/zoneinfo-leaps")
+ (string-append out "/share/zoneinfo/right"))
+ (delete-file-recursively
+ (string-append out "/share/zoneinfo-leaps")))))
+ (delete 'configure))))
(inputs `(("tzcode" ,(origin
(method url-fetch)
(uri (string-append
@@ -1179,7 +1219,6 @@ and daylight-saving rules.")
(base32
"1dvrq0b2hz7cjqdyd7x21wpy4qcng3rvysr61ij0c2g64fyb9s41")))))))))
-
(define-public libiconv
(package
(name "libiconv")
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 31ca5b2521..66504e9efd 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -12681,7 +12681,7 @@ once. This package provides tools to perform Drop-seq analyses.")
(define-public pigx-rnaseq
(package
(name "pigx-rnaseq")
- (version "0.0.2")
+ (version "0.0.3")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/BIMSBbioinfo/pigx_rnaseq/"
@@ -12689,7 +12689,7 @@ once. This package provides tools to perform Drop-seq analyses.")
"/pigx_rnaseq-" version ".tar.gz"))
(sha256
(base32
- "168hx2ig3rarphx3l21ay9yyg8ipaakzixnrhpbdi0sknhyvrrk8"))))
+ "0pz080k4ajlc4rlznkn3najy2a6874gb56rf9g4ag9wqz31q174j"))))
(build-system gnu-build-system)
(arguments
`(#:parallel-tests? #f ; not supported
@@ -12711,7 +12711,8 @@ once. This package provides tools to perform Drop-seq analyses.")
`("PYTHONPATH" ":" = (,(getenv "PYTHONPATH")))))
#t)))))
(inputs
- `(("snakemake" ,snakemake)
+ `(("gzip" ,gzip)
+ ("snakemake" ,snakemake)
("fastqc" ,fastqc)
("multiqc" ,multiqc)
("star" ,star)
@@ -12825,7 +12826,7 @@ in an easily configurable manner.")
(define-public pigx-bsseq
(package
(name "pigx-bsseq")
- (version "0.0.7")
+ (version "0.0.8")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/BIMSBbioinfo/pigx_bsseq/"
@@ -12833,7 +12834,7 @@ in an easily configurable manner.")
"/pigx_bsseq-" version ".tar.gz"))
(sha256
(base32
- "0pw797gxx6x1n56lyrvglj7q5hqq4ylfqkvlcrzq1z3j5lxcyl69"))))
+ "0irlnlhhw9fd4ha7hksrxn3y7j76mz5qq1wjswbs9p364laqg69y"))))
(build-system gnu-build-system)
(arguments
`(#:phases
diff --git a/gnu/packages/build-tools.scm b/gnu/packages/build-tools.scm
index 73eacf7df2..b1534e09a4 100644
--- a/gnu/packages/build-tools.scm
+++ b/gnu/packages/build-tools.scm
@@ -71,7 +71,7 @@ makes a few sacrifices to acquire fast full and incremental build times.")
(define-public meson
(package
(name "meson")
- (version "0.44.0")
+ (version "0.45.0")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/mesonbuild/meson/"
@@ -79,8 +79,17 @@ makes a few sacrifices to acquire fast full and incremental build times.")
version ".tar.gz"))
(sha256
(base32
- "06r8limj38mv884s5riiz6lpzw37cvhbf9jd0smzcbi7fwmv3yah"))))
+ "1r3wlimllakrswx2rb4mbdk1iricqk6myvdvib6dkyx362yanm9l"))))
(build-system python-build-system)
+ (arguments
+ `(;; FIXME: Tests require many additional inputs, a fix for the RUNPATH
+ ;; patch in meson-for-build, and patching many hard-coded file system
+ ;; locations in "run_unittests.py".
+ #:tests? #f
+ #:phases (modify-phases %standard-phases
+ ;; Meson calls the various executables in out/bin through the
+ ;; Python interpreter, so we cannot use the shell wrapper.
+ (delete 'wrap))))
(inputs `(("ninja" ,ninja)))
(propagated-inputs `(("python" ,python)))
(home-page "https://mesonbuild.com/")
@@ -98,15 +107,8 @@ resembles Python.")
(package
(inherit meson)
(name "meson-for-build")
- (version "0.42.1")
(source (origin
- (method url-fetch)
- (uri (string-append "https://github.com/mesonbuild/meson/"
- "archive/" version ".tar.gz"))
- (file-name (string-append name "-" version ".tar.gz"))
- (sha256
- (base32
- "1494hdnd40g2v6pky34j0f2iwc6kwn51vck37qwz7nl2xr17b18q"))
+ (inherit (package-source meson))
(patches (search-patches "meson-for-build-rpath.patch"))))
;; People should probably install "meson", not "meson-for-build".
diff --git a/gnu/packages/calendar.scm b/gnu/packages/calendar.scm
index 44bf05a9bb..b2f6aec83d 100644
--- a/gnu/packages/calendar.scm
+++ b/gnu/packages/calendar.scm
@@ -35,16 +35,19 @@
#:use-module (gnu packages databases)
#:use-module (gnu packages dav)
#:use-module (gnu packages freedesktop)
+ #:use-module (gnu packages glib)
#:use-module (gnu packages icu4c)
#:use-module (gnu packages perl)
+ #:use-module (gnu packages pkg-config)
#:use-module (gnu packages python)
#:use-module (gnu packages time)
+ #:use-module (gnu packages xml)
#:use-module (srfi srfi-26))
(define-public libical
(package
(name "libical")
- (version "2.0.0")
+ (version "3.0.3")
(source (origin
(method url-fetch)
(uri (string-append
@@ -52,15 +55,18 @@
version "/libical-" version ".tar.gz"))
(sha256
(base32
- "1njn2kr0rrjqv5g3hdhpdzrhankyj4fl1bgn76z3g4n1b7vi2k35"))))
+ "0hcjyf35b8rrvy8xziqxc4imi28mmkixb09gknisvp6jsa5fp4av"))))
(build-system cmake-build-system)
(arguments
'(#:tests? #f ; test suite appears broken
+ #:configure-flags '("-DSHARED_ONLY=true")
#:phases
(modify-phases %standard-phases
(add-before 'configure 'patch-paths
- (lambda _
- (let ((tzdata (assoc-ref %build-inputs "tzdata")))
+ (lambda* (#:key inputs #:allow-other-keys)
+ ;; FIXME: This should be patched to use TZDIR so we can drop
+ ;; the tzdata dependency.
+ (let ((tzdata (assoc-ref inputs "tzdata")))
(substitute* "src/libical/icaltz-util.c"
(("\\\"/usr/share/zoneinfo\\\",")
(string-append "\"" tzdata "/share/zoneinfo\""))
@@ -69,16 +75,22 @@
(("\\\"/usr/share/lib/zoneinfo\\\"") "")))
#t)))))
(native-inputs
- `(("perl" ,perl)))
+ `(("perl" ,perl)
+ ("pkg-config" ,pkg-config)))
(inputs
- `(("icu4c" ,icu4c)
+ `(("glib" ,glib)
+ ("libxml2" ,libxml2)
("tzdata" ,tzdata)))
+ (propagated-inputs
+ ;; In Requires.private of libical.pc.
+ `(("icu4c" ,icu4c)))
(home-page "https://libical.github.io/libical/")
(synopsis "iCalendar protocols and data formats implementation")
(description
"Libical is an implementation of the iCalendar protocols and protocol
data units.")
- (license license:lgpl2.1)))
+ ;; Can be used with either license. See COPYING.
+ (license (list license:lgpl2.1 license:mpl2.0))))
(define-public khal
(package
diff --git a/gnu/packages/cdrom.scm b/gnu/packages/cdrom.scm
index 6d33b917e1..53e65f3b84 100644
--- a/gnu/packages/cdrom.scm
+++ b/gnu/packages/cdrom.scm
@@ -9,7 +9,7 @@
;;; Copyright © 2017 John Darrington <jmd@gnu.org>
;;; Copyright © 2017 Thomas Danckaert <post@thomasdanckaert.be>
;;; Copyright © 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr>
-;;; Copyright © 2017 ng0 <ng0@n0.is>
+;;; Copyright © 2017 Nils Gillmann <ng0@n0.is>
;;;
;;; This file is part of GNU Guix.
;;;
diff --git a/gnu/packages/certs.scm b/gnu/packages/certs.scm
index 0f2f2d25ba..3cbf9202f9 100644
--- a/gnu/packages/certs.scm
+++ b/gnu/packages/certs.scm
@@ -75,7 +75,7 @@
(define-public nss-certs
(package
(name "nss-certs")
- (version "3.35")
+ (version "3.36")
(source (origin
(method url-fetch)
(uri (let ((version-with-underscores
@@ -86,7 +86,7 @@
"nss-" version ".tar.gz")))
(sha256
(base32
- "1ypn68z9ncbbshi3184ywrhx5i846lyd72gps1grzqzdkgh7s4pl"))))
+ "1580qc0a4s8v3k3vg7zz4xly4alkjrw7qq9zy2nf6p4v56wcfg53"))))
(build-system gnu-build-system)
(outputs '("out"))
(native-inputs
@@ -102,8 +102,10 @@
(srfi srfi-26)
(ice-9 regex))
#:phases
- (alist-cons-after
- 'unpack 'install
+ (modify-phases
+ (map (cut assq <> %standard-phases)
+ '(set-paths install-locale unpack))
+ (add-after 'unpack 'install
(lambda _
(let ((certsdir (string-append %output "/etc/ssl/certs/"))
(trusted-rx (make-regexp "^# openssl-trust=[a-zA-Z]"
@@ -131,10 +133,9 @@
;; "Usage error; try -help."
;; This looks like a bug in openssl-1.0.2, but we can also
;; switch into the target directory.
- (system* "c_rehash" "."))))
+ (invoke "c_rehash" "."))
+ #t))))))
- (map (cut assq <> %standard-phases)
- '(set-paths install-locale unpack)))))
(synopsis "CA certificates from Mozilla")
(description
"This package provides certificates for Certification Authorities (CA)
diff --git a/gnu/packages/check.scm b/gnu/packages/check.scm
index baebcb9b77..1fe13127d2 100644
--- a/gnu/packages/check.scm
+++ b/gnu/packages/check.scm
@@ -23,7 +23,7 @@
;;; Copyright © 2017 Frederick M. Muriithi <fredmanglis@gmail.com>
;;; Copyright © 2017 Mathieu Othacehe <m.othacehe@gmail.com>
;;; Copyright © 2017 Kei Kebreau <kkebreau@posteo.net>
-;;; Copyright © 2017 ng0 <ng0@infotropique.org>
+;;; Copyright © 2017 Nils Gillmann <ng0@n0.is>
;;; Copyright © 2015, 2017, 2018 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2016, 2017, 2018 Marius Bakke <mbakke@fastmail.com>
;;; Copyright © 2017 Ludovic Courtès <ludo@gnu.org>
diff --git a/gnu/packages/cinnamon.scm b/gnu/packages/cinnamon.scm
index 4a6e96291c..65aea47d5a 100644
--- a/gnu/packages/cinnamon.scm
+++ b/gnu/packages/cinnamon.scm
@@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2017 ng0 <ng0@infotropique.org>
+;;; Copyright © 2017 Nils Gillmann <ng0@n0.is>
;;;
;;; This file is part of GNU Guix.
;;;
diff --git a/gnu/packages/compression.scm b/gnu/packages/compression.scm
index c44882b23c..d41c56f96c 100644
--- a/gnu/packages/compression.scm
+++ b/gnu/packages/compression.scm
@@ -14,7 +14,7 @@
;;; Copyright © 2016 David Craven <david@craven.ch>
;;; Copyright © 2016 Kei Kebreau <kkebreau@posteo.net>
;;; Copyright © 2016 Marius Bakke <mbakke@fastmail.com>
-;;; Copyright © 2017 ng0 <ng0@n0.is>
+;;; Copyright © 2017 Nils Gillmann <ng0@n0.is>
;;; Copyright © 2017 Manolis Fragkiskos Ragkousis <manolis837@gmail.com>
;;; Copyright © 2017 Theodoros Foradis <theodoros@foradis.org>
;;; Copyright © 2017 Stefan Reichör <stefan@xsteve.at>
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index b54ddc6b55..749eed8b57 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -4,6 +4,7 @@
;;; Copyright © 2017 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2017 Raoul Bonnal <ilpuccio.febo@gmail.com>
;;; Copyright © 2018 Vijayalakshmi Vedantham <vijimay12@gmail.com>
+;;; Copyright © 2018 Sahithi Yarlagadda <sahi@swecha.net>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -3245,3 +3246,30 @@ how rivers split and merge. For example, they can be used to compare
different clusterings. This package provides an implementation of Sankey
plots for R.")
(license license:gpl2+)))
+
+(define-public r-dyn
+ (package
+ (name "r-dyn")
+ (version "0.2-9.6")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "dyn" version))
+ (sha256
+ (base32
+ "16fqv9k7yxdgybwzafjkyqm16qpgqz13lcjpi6a1nc8xbzlzh0gb"))))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-zoo" ,r-zoo)))
+ (home-page "https://cran.r-project.org/web/packages/dyn")
+ (synopsis "Time series regression")
+ (description
+ "This package provides the dyn class interfaces @code{ts}, @code{irts},
+@code{zoo} and @code{zooreg} time series classes to @code{lm}, @code{glm},
+@code{loess}, @code{quantreg::rq}, @code{MASS::rlm},
+@code{MCMCpack::MCMCregress()}, @code{quantreg::rq()},
+@code{randomForest::randomForest()} and other regression functions, allowing
+those functions to be used with time series including specifications that may
+contain lags, diffs and missing values.")
+ ;; Any GPL version.
+ (license license:gpl2+)))
diff --git a/gnu/packages/crypto.scm b/gnu/packages/crypto.scm
index 99a3b78b05..00d19a8d12 100644
--- a/gnu/packages/crypto.scm
+++ b/gnu/packages/crypto.scm