;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2013 Nikita Karetnikov <nikita@karetnikov.org>
;;; Copyright © 2013-2024 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2013, 2014, 2015, 2016, 2019, 2023 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2014, 2015 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2014, 2017, 2021, 2022 Eric Bavier <bavier@posteo.net>
;;; Copyright © 2014, 2015 Federico Beffa <beffa@fbengineering.ch>
;;; Copyright © 2015 Omar Radwan <toxemicsquire4@gmail.com>
;;; Copyright © 2015 Pierre-Antoine Rault <par@rigelk.eu>
;;; Copyright © 2015-2024 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2015, 2016, 2020 Christine Lemmer-Webber <cwebber@dustycloud.org>
;;; Copyright © 2015 Eric Dvorsak <eric@dvorsak.fr>
;;; Copyright © 2015, 2016 David Thompson <davet@gnu.org>
;;; Copyright © 2015, 2016, 2017, 2019, 2022 Leo Famulari <leo@famulari.name>
;;; Copyright © 2015, 2017 Ben Woodcroft <donttrustben@gmail.com>
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;;; Copyright © 2015-2024 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2015, 2017, 2020 Kyle Meyer <kyle@kyleam.com>
;;; Copyright © 2015, 2016 Chris Marusich <cmmarusich@gmail.com>
;;; Copyright © 2016 Danny Milosavljevic <dannym+a@scratchpost.org>
;;; Copyright © 2016 Lukas Gradl <lgradl@openmailbox.org>
;;; Copyright © 2016, 2018, 2019, 2021 Hartmut Goebel <h.goebel@crazy-compilers.com>
;;; Copyright © 2016 Daniel Pimentel <d4n1@d4n1.org>
;;; Copyright © 2016 So| 2022-10-13 | NEWS: Update it.... | Mathieu Othacehe |
| 2022-10-07 | Update NEWS.... | Maxim Cournoyer |
2017, 2019 Alex Vong <alexvong1995@gmail.com>
;;; Copyright © 2016–2018, 2021–2024 Arun Isaac <arunisaac@systemreboot.net>
;;; Copyright © 2016, 2017, 2018, 2020, 2021 Julien Lepiller <julien@lepiller.eu>
;;; Copyright © 2016–2022 Tobias Geerinckx-Rice <me@tobias.gr>
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;;; Copyright © 2017 Frederick M. Muriithi <fredmanglis@gmail.com>
;;; Copyright © 2017, 2018 Adriano Peluso <catonano@gmail.com>
;;; Copyright © 2017 Ben Sturmfels <ben@sturm.com.au>
;;; Copyright © 2017, 2018, 2019, 2021, 2022 Mathieu Othacehe <m.othacehe@gmail.com>
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;;; Copyright © 2017, 2020, 2021 Roel Janssen <roel@gnu.org>
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;;; Copyright © 2017 Rutger Helling <rhelling@mykolab.com>
;;; Copyright © 2017, 2019, 2021 Brendan Tildesley <mail@brendan.scot>
;;; Copyright © 2018 Ethan R. Jones <ethanrjones97@gmail.com
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;;; Copyright © 2018 Oleg Pykhalov <go.wigust@gmail.com>
;;; Copyright © 2018, 2019, 2021, 2023 Clément Lassieur <clement@lassieur.org>
;;; Copyright © 2018, 2019, 2020, 2021, 2022, 2023 Maxim Cournoyer <maxim.cournoyer@gmail.com>
;;; Copyright © 2018 Luther Thompson <lutheroto@gmail.com>
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;;; Copyright © 2020 Josh Marshall <joshua.r.marshall.1991@gmail.com>
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;;; Copyright © 2020 Alex ter Weele <alex.ter.weele@gmail.com>
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;;; Copyright © 2020, 2021, 2022, 2023, 2024 Vinicius Monego <monego@posteo.net>
;;; Copyright © 2020 Guy Fleury Iteriteka <gfleury@disroot.org>
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;;; Copyright © 2021 LibreMiami <packaging-guix@libremiami.org>
;;; Copyright © 2021 Xinglu Chen <public@yoctocell.xyz>
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;;; Copyright © 2021, 2023-2024 jgart <jgart@dismail.de>
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;;; Copyright © 2024 Rick Huijzer <ikbenrickhuyzer@gmail.com>
;;;
;;; This file is part of GNU Guix.
;;;
;;; GNU Guix is free software; you can redistribute it and/or modify it
;;; under the terms of the GNU General Public License as published by
;;; the Free Software Foundation; either version 3 of the License, or (at
;;; your option) any later version.
;;;
;;; GNU Guix is distributed in the hope that it will be useful, but
;;; WITHOUT ANY WARRANTY; without even the implied warranty of
;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;;; GNU General Public License for more details.
;;;
;;; You should have received a copy of the GNU General Public License
;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
(define-module (gnu packages python-xyz)
#:use-module ((guix licenses) #:prefix license:)
#:use-module (gnu packages)
#:use-module (gnu packages adns)
#:use-module (gnu packages aidc)
#:use-module (gnu packages algebra)
#:use-module (gnu packages astronomy)
#:use-module (gnu packages attr)
#:use-module (gnu packages audio)
#:use-module (gnu packages backup)
#:use-module (gnu packages base)
#:use-module (gnu packages bash)
#:use-module (gnu packages bdw-gc)
#:use-module (gnu packages bioinformatics)
#:use-module (gnu packages build-tools)
#:use-module (gnu packages check)
#:use-module (gnu packages cmake)
#:use-module (gnu packages compression)
#:use-module (gnu packages cpp)
#:use-module (gnu packages crates-io)
#:use-module (gnu packages crates-windows)
#:use-module (gnu packages crypto)
#:use-module (gnu packages databases)
#:use-module (gnu packages dbm)
#:use-module (gnu packages digest)
#:use-module (gnu packages django)
#:use-module (gnu packages djvu)
#:use-module (gnu packages docker)
#:use-module (gnu packages documentation)
#:use-module (gnu packages elf)
#:use-module (gnu packages emulators)
#:use-module (gnu packages enchant)
#:use-module (gnu packages file)
#:use-module (gnu packages fonts)
#:use-module (gnu packages fontutils)
#:use-module (gnu packages freedesktop)
#:use-module (gnu packages gcc)
#:use-module (gnu packages gdb)
#:use-module (gnu packages geo)
#:use-module (gnu packages ghostscript)
#:use-module (gnu packages gl)
#:use-module (gnu packages glib)
#:use-module (gnu packages gnome)
#:use-module (gnu packages gnupg)
#:use-module (gnu packages graphics)
#:use-module (gnu packages graphviz)
#:use-module (gnu packages gsasl)
#:use-module (gnu packages gstreamer)
#:use-module (gnu packages gtk)
#:use-module (gnu packages haskell-xyz)
#:use-module (gnu packages icu4c)
#:use-module (gnu packages image)
#:use-module (gnu packages image-processing)
#:use-module (gnu packages imagemagick)
#:use-module (gnu packages inkscape)
#:use-module (gnu packages java)
#:use-module (gnu packages jupyter)
#:use-module (gnu packages kerberos)
#:use-module (gnu packages libevent)
#:use-module (gnu packages libffi)
#:use-module (gnu packages libidn)
#:use-module (gnu packages libusb)
#:use-module (gnu packages linux)
#:use-module (gnu packages llvm)
#:use-module (gnu packages machine-learning)
#:use-module (gnu packages man)
#:use-module (gnu packages markup)
#:use-module (gnu packages maths)
#:use-module (gnu packages messaging)
#:use-module (gnu packages monitoring)
#:use-module (gnu packages multiprecision)
#:use-module (gnu packages ncurses)
#:use-module (gnu packages networking)
#:use-module (gnu packages ninja)
#:use-module (gnu packages node)
#:use-module (gnu packages openstack)
#:use-module (gnu packages pcre)
#:use-module (gnu packages pdf)
#:use-module (gnu packages perl)
#:use-module (gnu packages photo)
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages protobuf)
#:use-module (gnu packages pulseaudio)
#:use-module (gnu packages python)
#:use-module (gnu packages python-build)
#:use-module (gnu packages python-check)
#:use-module (gnu packages python-compression)
#:use-module (gnu packages python-crypto)
#:use-module (gnu packages python-science)
#:use-module (gnu packages python-web)
#:use-module (gnu packages qt)
#:use-module (gnu packages rdf)
#:use-module (gnu packages readline)
#:use-module (gnu packages regex)
#:use-module (gnu packages rust-apps)
#:use-module (gnu packages scanner)
#:use-module (gnu packages sdl)
#:use-module (gnu packages search)
#:use-module (gnu packages serialization)
#:use-module (gnu packages shells)
#:use-module (gnu packages sphinx)
#:use-module (gnu packages ssh)
#:use-module (gnu packages statistics)
#:use-module (gnu packages swig)
#:use-module (gnu packages tcl)
#:use-module (gnu packages terminals)
#:use-module (gnu packages tex)
#:use-module (gnu packages texinfo)
#:use-module (gnu packages textutils)
#:use-module (gnu packages time)
#:use-module (gnu packages tls)
#:use-module (gnu packages version-control)
#:use-module (gnu packages video)
#:use-module (gnu packages web)
#:use-module (gnu packages wxwidgets)
#:use-module (gnu packages xml)
#:use-module (gnu packages xdisorg)
#:use-module (gnu packages xorg)
#:use-module (guix packages)
#:use-module (guix build-system cargo)
#:use-module (guix build-system cmake)
#:use-module (guix build-system gnu)
#:use-module (guix build-system meson)
#:use-module (guix build-system pyproject)
#:use-module (guix build-system python)
#:use-module (guix download)
#:use-module (guix hg-download)
#:use-module (guix git-download)
#:use-module (guix gexp)
#:use-module (guix utils)
#:use-module (srfi srfi-1)
#:use-module (srfi srfi-26))
(define-public python-apprise
(package
(name "python-apprise")
(version "1.7.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "apprise" version))
(sha256
(base32 "0wvs1k71fipn617y9wsdcvwcgg2pd0nvriarlwl4438la4086ppg"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-certifi
python-click
python-dataclasses
python-markdown
python-pyyaml
python-requests
python-requests-oauthlib))
(native-inputs (list python-babel
python-coverage
python-cryptography
python-flake8
python-paho-mqtt
python-pytest
python-pytest-cov
python-pytest-mock
python-pytest-xdist
python-wheel))
(arguments
(list
#:phases #~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? inputs outputs #:allow-other-keys)
(when tests?
(delete-file "test/test_plugin_macosx.py")
(invoke "pytest")))))))
(home-page "https://github.com/caronc/apprise")
(synopsis
"Push notification Python library that works with many platforms")
(description
"Apprise is a Python library that allows sending push notifications to a broad
range of notification services, such as Telegram, Discord, Slack, Amazon SNS,
Gotify, etc.")
(license license:bsd-2)))
(define-public python-archspec
(package
(name "python-archspec")
(version "0.2.3")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/archspec/archspec")
(commit (string-append "v" version))
(recursive? #t)))
(file-name (git-file-name name version))
(sha256
(base32 "03yfn4b9xg41pd7vls2cils77wkkb9si1h2qqvnkds661fdankqj"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
'(modify-phases %standard-phases
;; Numba needs a writable dir to cache functions.
(add-before 'build 'set-numba-cache-dir
(lambda _
(setenv "NUMBA_CACHE_DIR" "/tmp"))))))
(propagated-inputs (list python-boltons
python-cooler
python-ctxcore
python-interlap
python-intervaltree
python-jsonschema
python-networkx
python-numba
python-poetry-core
pyscenic
python-scikit-learn
python-tables
python-typing-extensions))
(native-inputs (list python-black
python-flake8
python-isort
python-poetry-core
python-pylint
python-pytest
python-pytest-cov))
(home-page "https://github.com/archspec/archspec")
(synopsis "Library to query system architecture")
(description
"Archspec offers human-readable labels for system architecture aspects.
These aspects include CPU, network fabrics, etc. In addition, it offers
APIs to detect, query, and compare them.")
(license license:expat)))
(define-public python-awkward-cpp
(package
(name "python-awkward-cpp")
(version "32")
(source
(origin
(method url-fetch)
(uri (pypi-uri "awkward-cpp" version))
(sha256
(base32 "1w11fjkwrian3vll7jhnisl1b6m6rk2rqx0n9d1hzyq6cbw5m35d"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-importlib-resources python-numpy))
(native-inputs
(list cmake pybind11 python-pytest python-scikit-build-core))
(home-page "https://github.com/scikit-hep/awkward-1.0")
(synopsis "CPU kernels and compiled extensions for Awkward Array")
(description "Awkward CPP provides precompiled routines for the awkward
package. It is not useful on its own, only as a dependency for awkward.")
(license license:bsd-3)))
(define-public python-awkward
(package
(name "python-awkward")
(version "2.6.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "awkward" version))
(sha256
(base32 "1s280ndr4r2q9qn9c0slan5zw37p41cx8q5z6k6p988afr01c6j8"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
;; CUDA is and requires proprietary software.
'(list "--ignore-glob=tests-cuda**")))
(propagated-inputs (list python-awkward-cpp
python-fsspec
python-importlib-metadata
python-numpy
python-packaging
python-typing-extensions))
(native-inputs
(list python-hatch-fancy-pypi-readme
python-hatchling
python-pytest))
(home-page "https://github.com/scikit-hep/awkward-1.0")
(synopsis "Manipulate JSON-like data with NumPy-like idioms")
(description "Awkward Array is a library for nested, variable-sized data,
including arbitrary-length lists, records, mixed types, and missing data,
using NumPy-like idioms.")
(license license:bsd-3)))
(define-public python-xmldiff
(package
(name "python-xmldiff")
(version "2.7.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "xmldiff" version))
(sha256
(base32 "18k8kiml9wpl4wf9lmi0j6ys21lbdv8fa8r9qrzdsrh3h0ghp4f0"))))
(build-system python-build-system)
(propagated-inputs (list python-lxml))
(home-page "https://github.com/Shoobx/xmldiff")
(synopsis "Creates diffs of XML files")
(description "This Python tool figures out the differences between two
similar XML files, in the same way the @command{diff} utility does it.")
(license license:expat)))
(define-public python-janus
(package
(name "python-janus")
(version "1.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "janus" version))
(sha256
(base32 "04hnrdcf03g1s0x3sr72sh9gnszz6kyfsl9dg8a4n0zvvhn6z5yz"))))
(build-system pyproject-build-system)
(native-inputs
(list python-pytest python-pytest-cov python-pytest-asyncio))
(propagated-inputs (list python-typing-extensions))
(home-page "https://github.com/aio-libs/janus/")
(synopsis
"Sync-async queue to interoperate between asyncio tasks and classic threads")
(description
"Mixed sync-async queue, supposed to be used for communicating between
classic synchronous (threaded) code and asynchronous (in terms of
@url{https://docs.python.org/3/library/asyncio.html,asyncio}) one. Like
@url{https://en.wikipedia.org/wiki/Janus,Janus god} the queue object from the
library has two faces: synchronous and asynchronous interface. Synchronous is
fully compatible with
@url{https://docs.python.org/3/library/queue.html,standard queue},
asynchronous one follows
@url{https://docs.python.org/3/library/asyncio-queue.html,asyncio queue
design}.")
(license license:asl2.0)))
(define-public python-jupytext
(package
(name "python-jupytext")
(version "1.14.4")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/mwouts/jupytext")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "19d443vx597zzxna09qpync9iic3mris80bwm3kd8xaxaq0zq9w4"))))
(build-system python-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
;; some tests fail when HOME=/homeless-shelter.
(setenv "HOME" "/tmp")
;; OSError: [Errno 18] Invalid cross-device link
(setenv "TMPDIR" "/tmp")
(when tests?
(let ((disabled-tests
(list "test_create_header_with_set_formats"
"test_pre_commit_hook"
"test_sync_with_pre_commit_hook")))
(invoke "pytest" "-vv" "-k"
(string-append "not "
(string-join disabled-tests
" and not "))))))))))
(native-inputs
(list git-minimal
pre-commit
python-autopep8
python-black
python-flake8
python-gitpython
python-isort
python-ipython-genutils
python-jupyter-server
python-pytest
python-pyaml))
(propagated-inputs
(list python-markdown-it-py
python-mdit-py-plugins
python-nbformat))
(home-page "https://github.com/mwouts/jupytext")
(synopsis
"Jupyter notebooks as Markdown documents, Julia, Python or R scripts")
(description
"Jupytext is a plugin for Jupyter that can save Jupyter notebooks as
either Markdown files or scripts in many languages. Common use cases for
Jupytext are:
@itemize
@item version control on Jupyter Notebooks
@item editing, merging or refactoring notebooks in your favorite text editor
@item applying Q&A checks on notebooks.
@end itemize
")
(license license:expat)))
(define-public python-concurrent-log-handler
(package
(name "python-concurrent-log-handler")
(version "0.9.25")
;; No tests in the PyPI tarball.
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/Preston-Landers/concurrent-log-handler")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "0jp4zkm0idfdsrq3jzb52iqfkh6xzm7sacz1sa34ffnkyqdk3xzh"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-portalocker))
(native-inputs (list python-hatchling python-pytest))
(home-page "https://github.com/Preston-Landers/concurrent-log-handler")
(synopsis
"Additional log handler for Python's standard @code{logging} package")
(description
"This package provides an additional log handler for Python's standard
@code{logging} package (PEP 282). This handler will write log events to a log
file which is rotated when the log file reaches a certain size. Multiple
processes can safely write to the same log file concurrently and rotated logs
can be gzipped if desired. An optional threaded queue logging handler is
provided to perform logging in the background.")
(license license:asl2.0)))
(define-public python-logzero
(package
(name "python-logzero")
(version "1.7.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "logzero" version))
(sha256
(base32 "10nh186vk6hpnpfycym44gja4fja0jyzw7q8dwimfd1rmv9xswvz"))))
(build-system python-build-system)
(native-inputs
(list python-pytest python-pytest-runner))
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? inputs outputs #:allow-other-keys)
(when tests?
(add-installed-pythonpath inputs outputs)
(invoke "pytest")))))))
(home-page "https://github.com/metachris/logzero")
(synopsis "Robust and effective logging for Python")
(description
"@code{logzero} provides a fully configured Python logger object for
easy logging and rotating to a console or a file.")
(license license:expat)))
(define-public python-logbook
(package
(name "python-logbook")
(version "1.5.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Logbook" version))
(sha256
(base32 "1s1gyfw621vid7qqvhddq6c3z2895ci4lq3g0r1swvpml2nm9x36"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'build 'cythonize-sources
(lambda _
(with-directory-excursion "logbook"
(invoke "cython" "_speedups.pyx"))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
;; Check cython build also
(setenv "CYBUILD" "True")
(invoke "pytest" "--cov=logbook" "-r" "s" "tests")))))))
(native-inputs
(list python-cython python-mock python-pytest python-pytest-cov
python-brotli))
(home-page "https://github.com/getlogbook/logbook")
(synopsis "Logbook is a logging replacement for Python")
(description
"Logbook is a logging system for Python that replaces the standard
library’s logging module. It was designed with both complex and simple
applications in mind and the idea to make logging fun.")
(license license:bsd-3)))
(define-public python-ubelt
(package
(name "python-ubelt")
(version "1.0.1")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/Erotemic/ubelt")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0hac9nqqvqfbca2s4g0mp1fnj0ah60bg9fb8234ibna3jww8qs33"))))
(build-system python-build-system)
(arguments
(list #:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(setenv "HOME" "/tmp") ;else the test suite hangs
(invoke "pytest" "-vv" "-k"
(string-append
;; The builder user home doesn't match HOME,
;; which causes this test to fail.
"not userhome "
;; This one pointlessly tries
;; locating various binaries on
;; the path.
"and not find_exe"))))))))
(propagated-inputs (list python-ordered-set))
(native-inputs
(list python-pytest
python-requests
python-xdoctest))
(home-page "https://github.com/Erotemic/ubelt")
(synopsis "Python library for hashing, caching, timing and more")
(description "Ubelt is a small library of simple functions that extend the
Python standard library. It includes an @acronym{API, Application Programming
Interface} to simplify common problems such as caching, timing, computing
progress, among other things.")
(license license:asl2.0)))
(define-public python-ueberzug
(package
(name "python-ueberzug")
(version "18.1.9")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ueberzug" version))
(sha256
(base32
"1hxd45dnwa9yv908acarr98n2drmar66wzq9z2qd3irj24srzr3w"))))
(build-system python-build-system)
(inputs
(list libx11 libxext))
(propagated-inputs
(list python-attrs python-docopt python-pillow python-xlib))
(home-page "https://github.com/seebye/ueberzug")
(synopsis "Command line util to display images in combination with X11")
(description "Überzug is a command line util which draws images on
terminals by using child windows. The advantages of using Überzug are:
@itemize
@item No race conditions as a new window is created to display images.
@item Expose events will be processed, so images will be redrawn on switch
workspaces.
@item Tmux support (excluding multi pane windows).
@item Terminals without the WINDOWID environment variable are supported.
@item Chars are used as position - and size unit.
@item No memory leak (/ unlimited cache).
@end itemize")
(license license:gpl3+)))
(define-public python-databind-core
(package
(name "python-databind-core")
(version "4.4.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "databind.core" version))
(sha256
(base32 "130hr19kbzizx9n2q7cwfzfk20ii3cqmqjrzb16psnafll303k2d"))
(snippet
#~(begin (use-modules (guix build utils))
;; The problem with python-typing-extensions >= 4.7 is only
;; with python-3.7.
(substitute* "pyproject.toml"
((",<4.7.*") "\"\n"))))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-after 'install 'fix-name
(lambda* (#:key inputs outputs #:allow-other-keys)
(let* ((sitedir (site-packages inputs outputs))
(dist-info
(string-append sitedir "/databind_core-" #$version ".dist-info")))
(substitute* (string-append dist-info "/METADATA")
(("Name: databind-core")
"Name: databind.core"))
(substitute* (string-append dist-info "/RECORD")
(("databind_core") "databind.core"))
(rename-file dist-info
(string-append sitedir
"/databind.core-"
#$version ".dist-info"))))))))
(propagated-inputs
(list python-deprecated
python-nr-date
python-nr-stream
python-typeapi
python-typing-extensions))
(native-inputs
(list python-poetry-core python-pytest))
(home-page "https://niklasrosenstein.github.io/python-databind/core/")
(synopsis
"Library for de-/serializing Python dataclasses")
(description
"Databind is a library inspired by jackson-databind to de-/serialize
Python dataclasses.")
(license license:expat)))
(define-public python-databind-json
(package
(name "python-databind-json")
(version "4.4.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "databind.json" version))
(sha256
(base32 "1lm864d7arfq0pw64hyc83bwn1z94wjg7a22q1xf0qkjynqs70gg"))
(snippet
#~(begin (use-modules (guix build utils))
;; The problem with python-typing-extensions >= 4.7 is only
;; with python-3.7.
(substitute* "pyproject.toml"
((",<4.7.*") "\"\n"))))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-after 'install 'fix-name
(lambda* (#:key inputs outputs #:allow-other-keys)
(let* ((sitedir (site-packages inputs outputs))
(dist-info
(string-append sitedir "/databind_json-" #$version ".dist-info")))
(substitute* (string-append dist-info "/METADATA")
(("Name: databind-json")
"Name: databind.json"))
(substitute* (string-append dist-info "/RECORD")
(("databind_json") "databind.json"))
(rename-file dist-info
(string-append sitedir
"/databind.json-"
#$version ".dist-info"))))))))
(propagated-inputs
(list python-databind-core python-nr-date
python-typeapi python-typing-extensions))
(native-inputs (list python-poetry-core python-pytest))
(home-page "https://niklasrosenstein.github.io/python-databind/json/")
(synopsis
"De-/serialize Python dataclasses to or from JSON payloads")
(description
"The @code{databind.json} package implements the de-/serialization to or
from JSON payloads using the @code{databind.core} framework.")
(license license:expat)))
(define-public python-docspec
(package
(name "python-docspec")
(version "2.2.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "docspec" version))
(sha256
(base32 "1zqmdrc6k8pprra8p3wpzq2ml2gph1cfjmsyg07f8b8fvizffm28"))))
(build-system pyproject-build-system)
(arguments (list #:tests? #false)) ;there are none
(propagated-inputs
(list python-databind-core
python-databind-json
python-deprecated))
(native-inputs
(list python-poetry-core))
(home-page "https://github.com/NiklasRosenstein/python-docspec")
(synopsis "Represent API documentation of programming languages")
(description
"Docspec is a JSON object specification for representing API
documentation of programming languages.")
(license license:expat)))
(define-public python-docspec-python
(package
(name "python-docspec-python")
(version "2.2.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "docspec_python" version))
(sha256
(base32 "0n8m52vxmlvkj7p5jmd4rfdks65rrp4q4vzak44y6kbg9l5qa6y4"))))
(build-system pyproject-build-system)
(arguments
(list
#:tests? #false ;there are none
#:phases
'(modify-phases %standard-phases
(add-after 'unpack 'relax-requirements
(lambda _
;; We don't have black 23.
(substitute* "pyproject.toml"
(("23.1.0") "22.3.0")))))))
(propagated-inputs (list python-black python-docspec python-nr-util))
(native-inputs (list python-poetry-core))
(home-page "https://github.com/NiklasRosenstein/docspec/")
(synopsis "Produce docspec data from Python source code")
(description
"This package provides a parser based on @code{lib2to3} producing
@code{docspec} data from Python source code.")
(license license:expat)))
(define-public python-fire
(package
(name "python-fire")
(version "0.6.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "fire" version))
(sha256
(base32
"0rmaw26xjndr7makpiqv4h9aav9xf2h280w0khqc1lyddscmpv2l"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest")))))))
(propagated-inputs
(list python-six python-termcolor))
(native-inputs
(list python-mock python-pytest))
(synopsis "Library for automatically generating command line interfaces")
(description
"Fire is a library for automatically generating command line interfaces
from absolutely any Python object. The following are the advantages:
@itemize
@item A simple way to create a CLI in Python.
@item A helpful tool for developing and debugging Python code.
@item Helps with exploring existing code or turning other people's code into a
command line interface.
@item Makes transitioning between Bash and Python easier.
@item Makes using a Python REPL easier by setting up the REPL with the modules
and variables you'll need already imported and created.
@end itemize")
(home-page "https://github.com/google/python-fire")
(license license:asl2.0)))
(define-public python-fit-nbinom
(package
(name "python-fit-nbinom")
(version "1.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "fit_nbinom" version))
(sha256
(base32
"12v8l5i35vjbpvh5i4lw29ys6vpr3z7pysyrx33hxaq09zr015mx"))))
(build-system pyproject-build-system)
(arguments
(list
#:tests? #false ;there are none
#:phases
'(modify-phases %standard-phases
(add-after 'unpack 'remove-invalid-syntax
(lambda _
(substitute* "setup.py"
((".\\*\"") "\"")))))))
(propagated-inputs (list python-numpy python-scipy))
(home-page "https://github.com/joachimwolff/fit_nbinom")
(synopsis "Negative binomial maximum likelihood estimator")
(description "This package provides an implementation in Python using
scipy and numpy of negative binomial maximum likelihood estimation.")
(license license:gpl3+)))
(define-public python-docrep
(package
(name "python-docrep")
(version "0.3.2")
(source (origin
(method url-fetch)
(uri (pypi-uri "docrep" version))
(sha256
(base32
"0523jrzjj29kxpdllmfhrfj9kysi9mphp2m7ippjkn5b07i1g2pd"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-six))
(native-inputs (list python-pytest python-pytest-runner))
(home-page "https://github.com/Chilipp/docrep")
(synopsis "Python package for docstring repetition")
(description "Docrep is the documentation repetition module. This module
targets developers that develop complex and nested Python APIs and helps them
to create a well-documented piece of software.")
(license license:asl2.0)))
(define-public python-dotmap
(package
(name "python-dotmap")
(version "1.3.30")
(source (origin
(method url-fetch)
(uri (pypi-uri "dotmap" version))
(sha256
(base32
"0s5kb2v7jd0narz6m6jcicak3h5pw290wz21cdsv8pq77y9sf8aq"))))
(build-system python-build-system)
(home-page "https://github.com/drgrib/dotmap")
(synopsis "Ordered, dynamically-expandable dot-access dictionary")
(description
"DotMap is a dot-access dictionary subclass that has dynamic
hierarchy creation, can be initialized with keys, can be initialized from a
dictionary, can be convert to a dictionary, and is ordered by insertion.")
(license license:expat)))
(define-public python-dotty-dict
(package
(name "python-dotty-dict")
(version "1.3.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "dotty_dict" version))
(sha256
(base32
"058sah2nyg44xq5wxywlzc3abzcv9fifnlvsflwma9mfp01nw0ab"))))
(build-system pyproject-build-system)
(native-inputs (list python-poetry-core))
(home-page "https://github.com/pawelzny/dotty_dict")
(synopsis "Python library for accessing dictionaries using a dot syntax")
(description "This package provides a library that wraps the traditional
Python dictionaries and provides a syntax to access nested dictionaries values
using a dot syntax, for example: @code{dictionary['deeply.nested.key']}.")
(license license:expat)))
(define-public python-twodict
(package
(name "python-twodict")
(version "1.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "twodict" version))
(sha256
(base32 "0ifv7dv18jn2lg0a3l6zdlvmmlda2ivixfjbsda58a2ay6kxznr0"))))
(build-system python-build-system)
(home-page "https://github.com/MrS0m30n3/twodict")
(synopsis "Two way ordered dictionary for Python")
(description "TwoDict is a custom dictionary in which you can get the
key:value relationship but you can also get the value:key relationship. It also
remembers the order in which the items were inserted and supports almost all the
features of the Python's built-in dict.")
(license license:unlicense)))
(define-public python-adjusttext
(package
(name "python-adjusttext")
(version "0.8")
(source (origin
(method url-fetch)
(uri (pypi-uri "adjustText" version))
(sha256
(base32
"05zf0xn7ab40dan213fwbp1z4rybih8dphf9mzb2ddmbafxq41mv"))))
(build-system pyproject-build-system)
(arguments (list #:tests? #false)) ;there are none
(propagated-inputs (list python-matplotlib python-numpy))
(home-page "https://github.com/Phlya/adjustText")
(synopsis "Adjust text position in matplotlib plots to minimize overlaps")
(description
"Often when we want to label multiple points on a graph the text will
start heavily overlapping with both other labels and data points. This can be
a major problem requiring manual solution. However this can be largely
automatized by smart placing of the labels (difficult) or iterative adjustment
of their positions to minimize overlaps (relatively easy). This library
implements the latter option to help with matplotlib graphs.")
(license license:expat)))
(define-public python-affine
(package
(name "python-affine")
(version "2.4.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "affine" version))
(sha256
(base32
"1shyvajayyzbkp9dihb4mz835jnkp0kqqbyjfqci6v43da6q2kd2"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-coveralls python-flake8 python-pydocstyle
python-pytest python-pytest-cov))
(native-inputs (list python-flit-core))
(home-page "https://github.com/rasterio/affine")
(synopsis "Matrices describing affine transformation of the plane")
(description "This is a package for matrices describing the affine
transformation of the plane.")
(license license:bsd-3)))
(define-public python-argopt
(package
(name "python-argopt")
(version "0.7.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "argopt" version))
(sha256
(base32
"0ybs7kkp0cpl8zn1lvf7481xhssg1bbhh5la2cjzdm5yibashyxa"))))
(build-system python-build-system)
(native-inputs
(list python-coverage python-nose python-setuptools ; Won't build without this.
python-setuptools-scm))
(propagated-inputs
(list python-toml python-flake8))
(home-page "https://github.com/casperdcl/argopt")
(synopsis "Generate a command-line interface from a docstring")
(description "This package provides tools to define a command line interface
from a docstring rather than the other way around.")
(license license:mpl2.0)))
(define-public python-array-api-compat
(package
(name "python-array-api-compat")
(version "1.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "array_api_compat" version))
(sha256
(base32 "1bvn92v52h8p2zpinwv5bl1314kdjw3msalj91nczfdbrmay78bl"))))
(build-system pyproject-build-system)
;; Tests would require all supported array libraries, including pytorch
(arguments (list #:tests? #false))
(propagated-inputs (list python-numpy))
(home-page "https://data-apis.org/array-api-compat/")
(synopsis "Array API compatibility wrapper for NumPy et al")
(description
"This package provides a wrapper around @code{NumPy} and other array
libraries to make them compatible with the Array API standard")
(license license:expat)))
(define-public python-cachetools
(package
(name "python-cachetools")
(version "5.3.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "cachetools" version))
(sha256
(base32
"0azn5c4nkwpq7s5wjzs605if9nxjzblghjnlihm767sfkcnkzs6w"))))
(build-system python-build-system)
(home-page "https://github.com/tkem/cachetools/")
(synopsis "Extensible memoizing collections and decorators")
(description "This module provides various memoizing collections and
decorators, including variants of the Python standard library's
@code{lru_cache} function decorator.")
(license license:expat)))
(define-public python-cobib
(package
(name "python-cobib")
(version "3.5.2")
(source (origin
(method url-fetch)
(uri (pypi-uri "cobib" version))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"16nbrbvascbf6cb7yvn9q793dy8zx703pqrmk3mswib9a19mnx3n"))))
(build-system python-build-system)
(propagated-inputs
(list python-beautifulsoup4
python-bibtexparser
python-pylatexenc
python-requests
python-requests-oauthlib
python-ruamel.yaml))
(native-inputs
(list python-future
python-pyte
python-pytest))
(home-page "https://gitlab.com/mrossinek/cobib")
(synopsis "Terminal-based bibliography management tool")
(description
"@command{cobib} is a command-line based bibliography management tool.
It uses a plain-text database, a location-independent library, and features
git integration, command-line support, and a curses-based TUI.")
(license license:expat)))
(define-public python-colorcet
(package
(name "python-colorcet")
(version "3.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "colorcet" version))
(sha256
(base32 "1sx4m5xbz1k8bm8cr2f3x21dip167k7c1nv35npqla52h76v6899"))))
(build-system pyproject-build-system)
(native-inputs (list python-nbval
python-packaging
python-pytest
python-pytest-cov
python-pytest-mpl))
(home-page "https://colorcet.holoviz.org/")
(synopsis "Collection of perceptually uniform colormaps")
(description "Colorcet is a collection of perceptually accurate 256-color
colormaps for use with Python plotting programs like Bokeh, Matplotlib,
HoloViews, and Datashader.")
(license license:cc-by4.0)))
(define-public python-colored
(package
(name "python-colored")
(version "1.4.4")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://gitlab.com/dslackw/colored")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"196ins0m7f90xz5dw764dlx060ziqbcydqzzq40b4ir5858baf3r"))))
(build-system pyproject-build-system)
(arguments (list #:tests? #false)) ;the tests are not run automatically
(home-page "https://gitlab.com/dslackw/colored")
(synopsis "Simple library for color and formatting to terminal")
(description "This is a very simple Python library for color and
formatting in the terminal. It comes with a collection of color codes and
names for 256 color terminal setups.")
(license license:expat)))
(define-public python-colorful
(package
(name "python-colorful")
(version "0.5.5")
(source
(origin
(method git-fetch) ; no tests data in PyPi package
(uri (git-reference
(url "https://github.com/timofurrer/colorful")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0kyy9qhvrb5m9h8xmri7c88i0k1g5qc7017anw39gx44an7mn33y"))))
(build-system pyproject-build-system)
(native-inputs
(list python-coverage python-flake8 python-pytest))
(propagated-inputs
(list python-colorama))
(home-page "http://github.com/timofurrer/colorful")
(synopsis "Terminal string styling")
(description "Colorful provides an array of text styles, that can be used
as functions or string constants to form colored terminal output.")
(license license:expat)))
(define-public python-colorthief
(package
(name "python-colorthief")
(version "0.2.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "colorthief" version))
(sha256
(base32 "08bjsmmkihyksms2vgndslln02rvw56lkxz28d39qrnxbg4v1707"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-pillow))
(home-page "https://github.com/fengsp/color-thief-py")
(synopsis "Grab the color palette of an image")
(description
"This package provides methods to determine the dominant color
of an image, as well as constructing a representative color palette.")
(license license:bsd-3)))
(define-public python-construct-classes
(package
(name "python-construct-classes")
(version "0.1.2")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/matejcik/construct-classes")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0fmr8nfg543lyqk4164a52jb6lwpq98radicbkhhdfckq9lib2wp"))))
(build-system pyproject-build-system)
(propagated-inputs
(list python-construct))
(native-inputs
(list python-poetry-core
python-pytest))
(home-page "https://github.com/matejcik/construct-classes")
(synopsis "Parse binary structs into dataclasses")
(description "This package provides a parser to parse binary structs
into dataclasses.")
(license license:expat)))
(define-public python-contourpy
(package
(name "python-contourpy")
(version "1.1.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "contourpy" version))
(sha256
(base32 "1az80zv067rcybm5x93j7rfiakbwiv1h8l58gnki4wjbwb13gfln"))))
(build-system pyproject-build-system)
(arguments
;; Image tests require matplotlib and create a circular dependency.
(list #:test-flags
#~(list "-m" "not image")))
(propagated-inputs
(list python-numpy))
(native-inputs
(list cmake
meson-python
pkg-config
pybind11
python-pytest
python-pytest-cov
python-wurlitzer))
(home-page "https://contourpy.readthedocs.io/")
(synopsis
"Python library for calculating contours of 2D quadrilateral grids")
(description
"ContourPy is a Python library for calculating contours of 2D
quadrilateral grids. It is written in C++11 and wrapped using pybind11.")
(license license:bsd-3)))
(define-public python-yaspin
(package
(name "python-yaspin")
(version "1.5.0")
(source
(origin
(method url-fetch)
(uri
(pypi-uri "yaspin" version))
(sha256
(base32 "1iirah0kydrdp505qnjj6gi54avcr7z0hbkfx9vmh8myr30rpz6q"))))
(build-system python-build-system)
(native-inputs
(list python-pytest))
(home-page "https://github.com/pavdmyt/yaspin")
(synopsis "Yet Another Terminal Spinner")
(description "Yaspin provides a terminal spinner to indicate the progress
during long operations.")
(license license:expat)))
(define-public python-lunr
(package
(name "python-lunr")
(version "0.7.0.post1")
(source
(origin
(method url-fetch)
(uri
(pypi-uri "lunr" version))
(sha256
(base32 "1njb23lw619ppidqdzygdrscna4z15n9xjc4cc7yxiskkgsriz00"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
'(list "-k" "not TestLanguageSupport"
"--ignore-glob=tests/acceptance_tests/*")))
(native-inputs
(list python-coverage
python-hatch-fancy-pypi-readme
python-hatchling
python-pytest
python-pytest-timeout
python-tox))
(propagated-inputs
(list python-importlib-metadata python-typing-extensions))
(home-page
"https://github.com/yeraydiazdiaz/lunr.py")
(synopsis "Full-text search library")
(description "This package provides python library for full-text search.
It indexes documents and provides a search interface for retrieving documents
that best match text queries.")
(license license:expat)))
(define-public python-mdit-py-plugins
(package
(name "python-mdit-py-plugins")
(version "0.3.1")
(source (origin
(method git-fetch) ;for tests
(uri (git-reference
(url "https://github.com/executablebooks/mdit-py-plugins")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"00ybbfb6dzn9q5qnvnm8bmhd84s215ik7pcdb4r35zhwiv2ikizz"))))
(build-system pyproject-build-system)
(propagated-inputs
(list python-markdown-it-py
python-attrs))
(native-inputs
(list python-coverage
python-flit-core
python-pytest
python-pytest-cov
python-pytest-regressions))
(home-page "https://github.com/executablebooks/mdit-py-plugins")
(synopsis "Collection of plugins for markdown-it-py")
(description "This package contains a collection of plugins for
@code{markdown-it-py} like:
@enumerate
@item amsmath,
@item attrs,
@item container,
@item definition list,
@item dollarmath,
@item field list,
@item footnote,
@item textmath, and
@item wordcount.
@end enumerate")
(license license:expat)))
(define-public python-mdurl
(package
(name "python-mdurl")
(version "0.1.2")
(source
(origin
(method git-fetch) ; no tests data in PyPi package
(uri (git-reference
(url "https://github.com/executablebooks/mdurl")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "0csc777q42jzv4zgdzxmwp8xqlb92ws1jvj09m2smh4klw67q5f3"))))
(build-system pyproject-build-system)
(native-inputs (list python-flit python-pytest))
(home-page "https://github.com/executablebooks/mdurl")
(synopsis "Markdown URL utilities")
(description
"This package implements a Python port of the JavaScript @code{mdurl}.")
(license license:expat)))
(define-public python-mrkd
(package
(name "python-mrkd")
(version "0.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "mrkd" version))
(sha256
(base32 "1bvaqbna1ihb4y2mv9pmvqcq3r9j6lwbbii99dani8lxx4dqqvs5"))))
(build-system python-build-system)
(propagated-inputs
(list python-jinja2 python-mistune python-pygments))
(home-page "https://pypi.org/project/mrkd/")
(synopsis "Python Markdown implementation")
(description
"@code{mrkd} writes man pages using Markdown, and convert them to Roff or
HTML")
(license license:bsd-3)))
(define-public python-mkdocs
(package
(name "python-mkdocs")
(version "1.3.0")
(source
(origin
;; The tests suite appears to be incomplete in the PyPI archive.
(method git-fetch)
(uri (git-reference
(url "https://github.com/mkdocs/mkdocs")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"1n5rdllrxvhnxmdrddf55p3s86dakx0rq2gg6bj6pr6jg2pn932b"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
;; Requirements refer to a specific version of dependencies,
;; which are too old. So we patch to refer to any later version.
(add-after 'unpack 'patch-requirements
(lambda _
(substitute* "setup.py"
(("==") ">="))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "python" "-m" "unittest"
"discover" "-p" "*tests.py" "mkdocs"
"--top-level-directory" ".")))))))
(propagated-inputs
(list python-babel
python-click
python-ghp-import
python-importlib-metadata
python-jinja2
python-markdown
python-markupsafe
python-mdx-gh-links
python-mergedeep
python-packaging
python-pyyaml
python-pyyaml-env-tag
python-watchdog))
(home-page "https://www.mkdocs.org")
(synopsis "Project documentation with Markdown")
(description "MkDocs is a static site generator geared towards building
project documentation. Documentation source files are written in Markdown, and
configured with a single YAML configuration file.")
(license license:bsd-3)))
(define-public python-mkdocs-markdownextradata-plugin
(package
(name "python-mkdocs-markdownextradata-plugin")
(version "0.2.5")
(source (origin
;; Use git, as there are some test files missing from the PyPI release,
;; see https://github.com/rosscdh/mkdocs-markdownextradata-plugin/issues/41.
(method git-fetch)
(uri (git-reference
(url "https://github.com/rosscdh/mkdocs-markdownextradata-plugin")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"1a3868s9m7pzyfncpjbjsa9vw5nihssl2v47pxj7h6qa67kvlk3g"))))
(build-system python-build-system)
(native-inputs (list python-pytest))
(propagated-inputs (list python-mkdocs python-pyyaml))
(home-page "https://github.com/rosscdh/mkdocs-markdownextradata-plugin/")
(synopsis "Inject mkdocs.yml extra variables into the MkDocs markdown
template")
(description
"This package provides a MkDocs plugin that injects the mkdocs.yml extra
variables into the markdown template")
(license license:expat)))
(define-public python-mysql-connector-python
(package
(name "python-mysql-connector-python")
(version "8.0.33")
;; The archive on PyPi does not contain a build system
(source (origin
(method url-fetch)
(uri (string-append "https://cdn.mysql.com/Downloads/"
"Connector-Python/mysql-connector-python-"
version "-src.tar.gz"))
(sha256
(base32
"00j9xgd43yzx5yiijnlmpaqpa58m5lscjglsgzg48dibhr69br0l"))))
(build-system python-build-system)
(arguments
(list
#:configure-flags
#~(list (string-append "--with-mysql-capi="
#$(this-package-input "mysql"))
(string-append "--with-protobuf-include-dir="
#$(this-package-input "protobuf")
"/include/google/protobuf")
(string-append "--with-protobuf-lib-dir="
#$(this-package-input "protobuf")
"/lib")
(string-append "--with-protoc="
#$(this-package-input "protobuf")
"/bin/protoc"))
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'compatibility
(lambda _
(substitute* "src/mysql_capi.c"
(("res = mysql_options\\(&self->session, MYSQL_OPT_LOAD_DATA_LOCAL_DIR.*")
"res = 0;")
(("mysql_options\\(&self->session, MYSQL_OPT_LOAD_DATA_LOCAL_DIR.*")
"")
(("mysql_options\\(&self->session, MYSQL_OPT_TLS_CIPHERSUITES.*")
"")
;; The C API does not have mysql_bind_param, so we produce an
;; error here.
(("status = mysql_bind_param.*") "status = 1;"))
;; See https://github.com/protocolbuffers/protobuf/issues/9943
(substitute* "src/mysqlxpb/mysqlxpb.cc"
(("google::protobuf::string") "std::string"))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
;; Some of these tests might be failing due to the build
;; container's restrictions, others are due to the version
;; mismatch.
(substitute* "tests/cext/test_cext_api.py"
(("def test_change_user") "def _do_not_test_change_user")
(("def test_get_character_set_info")
"def _do_not_test_get_character_set_info"))
(substitute* "tests/test_bugs.py"
(("def test_change_user") "def _do_not_test_change_user")
(("def test_lost_connection") "def _do_not_test_lost_connection")
(("def test_kill_query") "def _do_not_test_kill_query")
;; These all fail because of expired certificates.
(("def test_cext_verify_server_certificate")
"def _do_not_test_cext_verify_server_certificate")
(("def test_pure_verify_server_certificate")
"def _do_not_test_pure_verify_server_certificate")
(("def test_verify_server_name_cext_cnx")
"def _do_not_test_verify_server_name_cext_cnx")
(("def test_verify_server_name_pure_cnx")
"def _do_not_test_verify_server_name_pure_cnx"))
(substitute* "tests/test_connection.py"
(("def test_allow_local_infile_in_path")
"def _do_not_test_allow_local_infile_in_path")
;; This fails because of expired certificates.
(("def test_connect_with_unix_socket")
"def _do_not_test_connect_with_unix_socket"))
(substitute* "tests/test_mysqlx_connection.py"
;; This fails because of expired certificates.
(("def test_ssl_connection")
"def _do_not_test_ssl_connection"))
(substitute* "tests/test_constants.py"
(("def test_deprecated")
"def _do_not_test_deprecated"))
(mkdir-p "/tmp/datadir")
(invoke "python3" "unittests.py"
"--verbosity=3"
(string-append "--with-mysql=" #$(this-package-input "mysql"))
"--keep"
"--mysql-topdir=/tmp/datadir"
"--unix-socket=/tmp/datadir")))))))
(propagated-inputs (list python-protobuf))
(inputs (list mysql protobuf-3.20 openssl-1.1 zlib))
(home-page "https://dev.mysql.com/doc/connector-python/en/index.html")
(synopsis "MySQL driver written in Python")
(description "MySQL Connector/Python enables Python programs to access
MySQL databases, using an API that is compliant with the Python Database API
Specification v2.0 (PEP 249).")
(license license:gpl2)))
(define-public python-pdoc
(package
(name "python-pdoc")
(version "13.0.1")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/mitmproxy/pdoc")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0gxkw607nrd67ck4w8jri9vfrm5g60qvp8b134m8zkiphbxjnx0l"))))
(build-system pyproject-build-system)
(native-inputs (list python-pytest python-jinja2 python-pygments))
(arguments
(list
;; Some tests fail, presumably because of slight version mismatches of
;; the dependencies.
#:test-flags
'(list "-k" (string-append "not test_var_with_raising_repr and "
"not test_smoke[mock] and "
"not test_snapshots[html"))))
(home-page "https://pdoc.dev/")
(synopsis "API documentation for Python projects")
(description "pdoc auto-generates API documentation that follows your
project's Python module hierarchy. It requires no configuration, has
first-class support for type annotations, cross-links between identifiers,
comes with an integrated live-reloading web server, uses customizable HTML
templates, understands numpydoc and Google-style docstrings.")
(license license:unlicense)))
(define-public python-py4j
(package
(name "python-py4j")
(version "0.10.9.7")
(source (origin
(method url-fetch)
(uri (pypi-uri "py4j" version))
(sha256
(base32
"1fwdx92cdaiviradksfyygg05g1fpc3x2lf65bv5rnispcam6vhb"))))
(build-system python-build-system)
(home-page "https://www.py4j.org/")
(synopsis "Dynamically access arbitrary Java objects from Python")
(description
"This package enables Python programs to dynamically access arbitrary
Java objects.")
(license license:bsd-3)))
(define-public python-pymdown-extensions
(package
(name "python-pymdown-extensions")
(version "8.1.1")
(source
(origin
(method url-fetch)
(uri
(pypi-uri "pymdown-extensions" version))
(sha256
(base32 "0d8pdndrl1kj105lq7r6kw2dnhcvll6h2qs07w71mcpi7gx728v3"))))
(build-system python-build-system)
;; FIXME: "AssertionError: False is not true"
(arguments
`(#:tests? #f))
(propagated-inputs
(list python-markdown))
(home-page "https://github.com/facelessuser/pymdown-extensions")
(synopsis "Extension pack for Python Markdown")
(description "PyMdown Extensions is a collection of extensions for Python
Markdown. All extensions are found under the module namespace of pymdownx.")
(license license:expat)))
(define-public python-pint
(package
(name "python-pint")
(version "0.23")
(source (origin
(method url-fetch)
(uri (pypi-uri "Pint" version))
(sha256
(base32
"1d69dqs0j907x4hgz2k8f3zjzhgs9zvlw2k0gi955g3dc28rnl71"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
'(list "-k" (string-append
;; This test tries to write to $HOME/.cache/pint.
"not test_auto"
;; Fails with "Group USCSLengthInternational already
;; present in registry"
" and not test_load_definitions_stage_2"))))
(native-inputs
(list python-pytest python-pytest-benchmark python-pytest-cov
python-pytest-mpl python-pytest-subtests
python-setuptools-scm))
(propagated-inputs
(list python-typing-extensions
python-uncertainties))
(home-page "https://github.com/hgrecco/pint")
(synopsis "Physical quantities module")
(description
"Pint is a Python package to define, operate and manipulate physical
quantities: the product of a numerical value and a unit of measurement. It
allows arithmetic operations between them and conversions from and to
different units.")
(license license:bsd-3)))
(define-public python-plotext
(package
(name "python-plotext")
(version "5.2.8")
(source (origin
(method url-fetch)
(uri (pypi-uri "plotext" version))
(sha256
(base32
"1gpy1z2i4vq1mcrhysxahz4339pbl9rzk58rf5m5gf5ym9xji6ii"))))
(build-system pyproject-build-system)
(arguments (list #:tests? #false)) ;there are none
(home-page "https://github.com/piccolomo/plotext")
(synopsis "Plots in the terminal")
(description "Plotext lets you plot directly to the terminal.")
(license license:expat)))
(define-public python-plotille
(package
(name "python-plotille")
(version "4.0.2")
(source (origin
(method url-fetch)
(uri (pypi-uri "plotille" version))
(sha256
(base32
"0fvsk6glxfphhqy405h05rj3v95jd1byl5hv2fyd5l31wln23shj"))))
(build-system python-build-system)
(native-inputs (list python-six))
(home-page "https://github.com/tammoippen/plotille")
(synopsis "Plot in the terminal using braille dots")
(description
"Plotille provides a figure class and graphing functions to create plots,
scatter plots, histograms and heatmaps in the terminal using braille dots.")
(license license:expat)))
(define-public python-poetry-dynamic-versioning
(package
(name "python-poetry-dynamic-versioning")
(version "1.4.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "poetry_dynamic_versioning" version))
(sha256
(base32 "19v9jrawbx1nwnwrd6giyzwfq50y2mjzkrsx0ga2sbx2a2yphlbj"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
#~(list "--ignore=tests/test_integration.py"
;; E RuntimeError: Unable to detect version control system. Not
;; installed: Git, Mercurial, Darcs, Subversion, Bazaar, Fossil,
;; Pijul.
"-k"
(string-append
"not test__get_version__defaults"
" and not test__get_version__format_jinja"
" and not test__get_version__format_jinja_with_enforced_style"
" and not test__get_version__format_jinja_imports_with_module_only"
" and not test__get_version__format_jinja_imports_with_module_and_item"))))
(native-inputs
(list python-poetry-core
python-pytest))
(propagated-inputs
(list poetry
python-dunamai
python-jinja2
python-tomlkit))
(home-page "https://github.com/mtkennerly/poetry-dynamic-versioning")
(synopsis "Poetry plugin enabling VCS tags dynamic versioning")
(description
"This package provides a build backend that patches Poetry Core to enable
the versioning system in PEP 517 build frontends.")
(license license:expat)))
(define-public python-portpicker
(package
(name "python-portpicker")
(version "1.6.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "portpicker" version))
(sha256
(base32 "1yiisk4h8qliwf99khz3lszrpjf6km76fbhzg01fwrbgz7b7yl5x"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
;; This fails because portserver ends up in bin, not site-packages
'(list "--ignore=src/tests/portserver_test.py")))
(propagated-inputs (list python-psutil))
(native-inputs (list python-pytest net-tools))
(home-page "https://github.com/google/python_portpicker")
(synopsis "Choose unique available network ports")
(description
"This package provides a library to choose unique available network
ports.")
(license license:asl2.0)))
(define-public python-mdx-gh-links
(package
(name "python-mdx-gh-links")
(version "0.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "mdx_gh_links" version))
(sha256
(base32 "167k1jbp3jifxbnlpi6wy0z1skam7gqv2sixb5bhggb2vypqvysr"))))
(build-system python-build-system)
(arguments (list #:tests? #f)) ;tests connect github
(propagated-inputs (list python-markdown))
(home-page "https://github.com/Python-Markdown/github-links/")
(synopsis "Python-Markdown extension adding support for shorthand links")
(description "This package is an extension to Python-Markdown which adds
support for shorthand links to GitHub users, repositories, issues and
commits.")
(license license:bsd-3)))
(define-public python-mkdocs-material
(package
(name "python-mkdocs-material")
(version "7.1.3")
(source
(origin
(method url-fetch)
(uri
(pypi-uri "mkdocs-material" version))
(sha256
(base32 "0ci9xiasq9nfn09v11m7p49vzazdbgslw7rpzjd6y3hsmn9vljz3"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
;; Requirement mkdocs-material-extensions
;; in-turn requires mkdocs-material. This causes
;; circular dependency, so we remove this requirement.
(add-after 'unpack 'patch-requirements
(lambda _
(substitute* "requirements.txt"
(("mkdocs-material-extensions.*$") "")))))))
(propagated-inputs
(list python-markdown python-mkdocs python-pygments
python-pymdown-extensions))
(home-page "https://squidfunk.github.io/mkdocs-material/")
(synopsis "Material Design theme for MkDocs")
(description "This package provides a theme plugin for the static site
generator MkDocs.")
(license license:expat)))
(define-public python-skranger
(package
(name "python-skranger")
(version "0.8.0")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/crflynn/skranger")
(commit version)
(recursive? #true)))
(file-name (git-file-name name version))
(sha256
(base32
"0njy4xbc98l295k92nyk93njv1348vd1il5pdyrnk8nnzc2anzf0"))))
(build-system pyproject-build-system)
(arguments
(list
#:modules '((guix build pyproject-build-system)
(guix build utils)
(ice-9 match))
#:test-flags
;; "from sklearn.datasets import load_boston" fails because it has been
;; removed from scikit-learn since version 1.2.
'(list "--ignore=tests/conftest.py"
"--ignore=tests/test_tools.py"
"--ignore=tests/tree/test_regressor.py"
"--ignore=tests/ensemble/test_regressor.py")
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'fix-tests
(lambda _
(substitute* "tests/conftest.py"
(("from sklearn.datasets import load_boston") "")
(("^_boston_X.*") "_boston_X, _boston_Y = (True, True)\n"))))
(add-before 'check 'build-extensions
(lambda _
;; Cython extensions have to be built before running the tests.
(invoke "python" "buildpre.py")
(invoke "python" "build.py" "build_ext" "--inplace")
(let ((site (string-append #$output "/lib/python"
#$(version-major+minor
(package-version python))
"/site-packages/skranger"))
(lib (match (find-files "build" "\\.so")
((the-lib) the-lib)
(_ (error "could not find .so")))))
(mkdir-p site)
(install-file lib site)))))))
(propagated-inputs (list python-scikit-learn))
(native-inputs
(list python-cython
python-matplotlib
python-pandas
python-poetry-core
python-pytest))
(home-page "https://github.com/crflynn/skranger")
(synopsis "Python bindings for C++ ranger random forests")
(description "This package provides scikit-learn compatible Python
bindings to the C++ random forest implementation, ranger, using Cython.")
(license license:gpl3+)))
(define-public python-nr-date
(package
(name "python-nr-date")
(version "2.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "nr_date" version))
(sha256
(base32 "1rnjyykjp41mqz6h1vx18jblq97gi5m5x7dgasyaihnd7fhswhq6"))))
(build-system pyproject-build-system)
(arguments (list #:tests? #false)) ;there are none
(propagated-inputs (list python-dataclasses))
(native-inputs (list python-poetry-core))
(home-page "https://github.com/NiklasRosenstein/python-nr.date")
(synopsis "Fast, regex-based date parsing library in plain Python")
(description "This package provides a fast, regex-based date parsing
library in pure Python.")
(license license:expat)))
(define-public python-nr-stream
(package
(name "python-nr-stream")
(version "1.1.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "nr_stream" version))
(sha256
(base32 "0rag4vbjnalkyfcarx6yipn11ih2hmc3pfldava4c6n6pz31c0pb"))))
(build-system pyproject-build-system)
(arguments (list #:tests? #false)) ;there are none
(native-inputs (list python-poetry-core))
(home-page "https://github.com/NiklasRosenstein/python-nr.stream")
(synopsis "Stream and Optional classes for Python")
(description "This package provides a @code{Stream} and @code{Optional}
class.")
(license license:expat)))
(define-public python-nr-util
(package
(name "python-nr-util")
(version "0.8.12")
(source
(origin
(method url-fetch)
(uri (pypi-uri "nr.util" version))
(sha256
(base32 "1x0l4811dskwrk83l2xzdcldx2iazlrx5wxkg41jz7fr6ch9qm54"))))
(build-system pyproject-build-system)
(arguments
(list
#:tests? #false ;there are none
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'patch-build-system
(lambda _
(substitute* "pyproject.toml"
(("^config =.*") "config = []\n"))))
(add-after 'install 'fix-name
(lambda* (#:key inputs outputs #:allow-other-keys)
(let* ((sitedir (site-packages inputs outputs))
(dist-info
(string-append sitedir "/nr_util-" #$version ".dist-info")))
(substitute* (string-append dist-info "/METADATA")
(("Name: nr-util")
"Name: nr.util"))
(substitute* (string-append dist-info "/RECORD")
(("nr_util") "nr.util"))
(rename-file dist-info
(string-append sitedir
"/nr.util-"
#$version ".dist-info"))))))))
(propagated-inputs (list python-deprecated python-typing-extensions))
(native-inputs (list python-poetry-core))
(home-page "https://github.com/NiklasRosenstein/python-nr.util")
(synopsis "General purpose Python utility library")
(description "This package provides a general purpose Python utility
library.")
(license license:expat)))
(define-public python-slicerator
(package
(name "python-slicerator")
(version "1.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "slicerator" version))
(sha256
(base32 "0ik0bmh18zgffd9kx53254jp3yyih6zcmd8kfb080xnqbizhl0a4"))))
(build-system pyproject-build-system)
(home-page "https://github.com/soft-matter/slicerator")
(synopsis "Lazy-loading, fancy-sliceable iterable")
(description
"This package provides a lazy-loading, fancy-sliceable iterable. Think
of it like a generator that is \"reusable\" and has a length.")
(license license:bsd-3)))
(define-public python-slixmpp
(package
(name "python-slixmpp")
(version "1.8.3")
(source
(origin
(method git-fetch)
(uri
(git-reference
(url "https://lab.louiz.org/poezio/slixmpp.git")
(commit
(string-append "slix-" version))))
(file-name
(git-file-name name version))
(sha256
(base32 "0cvr037qhf0fpby5dci6ckqngaly1mnjs2zpndwgmvr3dyvrd8l8"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch
(lambda _
(substitute* "setup.py"
(("'CC', 'cc'")
"'CC', 'gcc'"))
#t)))))
(native-inputs
`(("cython" ,python-cython)
("gnupg" ,gnupg)
("pkg-config" ,pkg-config)))
(propagated-inputs
(list python-aiodns
python-aiohttp
python-cryptography
python-defusedxml
python-emoji
python-pyasn1
python-pyasn1-modules))
(inputs
(list libidn python)) ; We are building a Python extension.
(synopsis "XMPP library without threads")
(description "Slixmpp is a XMPP library for Python 3.7+. It is a fork of
SleekXMPP. Its goal is to only rewrite the core of the library (the low level
socket handling, the timers, the events dispatching) in order to remove all
threads.")
(home-page "https://lab.louiz.org/poezio/slixmpp")
(license license:expat)))
(define-public python-tenacity
(package
(name "python-tenacity")
(version "8.0.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "tenacity" version))
(sha256
(base32
"0bwkvjpjfyi9dgszzad9aww2vc00w3bczjnbifi92cp7wch2l923"))))
(build-system pyproject-build-system)
(native-inputs
(list python-setuptools-scm python-tornado-6 python-typeguard
python-pytest))
(home-page "https://github.com/jd/tenacity")
(synopsis "Retrying library for python")
(description "Tenacity is a general-purpose python library to simplify the
task of adding retry behavior to just about anything.")
(license license:asl2.0)))
(define-public python-pytelegrambotapi
(package
(name "python-pytelegrambotapi")
(version "4.22.0")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/eternnoir/pyTelegramBotAPI")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "0mic9wk6xg7p2ca7b03fc19l86yc9bkciq7kp8l9xvzzzmg4rzw4"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(with-directory-excursion "tests"
(invoke "py.test"))))))))
(propagated-inputs
(list python-requests))
(native-inputs
(list python-hatchling python-pytest))
(home-page "https://github.com/eternnoir/pyTelegramBotAPI")
(synopsis "Python Telegram bot api")
(description "This package provides a simple, but extensible Python
implementation for the Telegram Bot API.")
(license license:gpl2)))
(define-public python-colorlog
(package
(name "python-colorlog")
(version "6.6.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "colorlog" version))
(sha256
(base32 "1s7x0v872h8aks8xp01wmv6hzisxqjrh1svbbcycir0980h76krl"))))
(build-system python-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key inputs outputs tests? #:allow-other-keys)
(when tests?
(add-installed-pythonpath inputs outputs)
(invoke "python" "-m" "pytest")))))))
(native-inputs
(list python-pytest))
(home-page "https://github.com/borntyping/python-colorlog")
(synopsis "Log formatting with colors for python")
(description "The @code{colorlog.ColoredFormatter} is a formatter for use
with Python's logging module that outputs records using terminal colors.")
(license license:expat)))
(define-public python-pyprind
(package
(name "python-pyprind")
(version "2.11.3")
(source (origin
(method url-fetch)
(uri (pypi-uri "PyPrind" version))
(sha256
(base32
"1gscnlvj37m421ch3akm3kddxqkrgbg5zrpwy2ky1j59w6vclzg3"))))
(build-system python-build-system)
(propagated-inputs
(list python-psutil))
(home-page "https://github.com/rasbt/pyprind")
(synopsis "Python Progress Bar and Percent Indicator Utility")
(description "The PyPrind (Python Progress Indicator) module provides a
progress bar and a percentage indicator object that let you track the progress
of a loop structure or other iterative computation.")
(license license:bsd-3)))
(define-public python-gh-md-to-html
(package
(name "python-gh-md-to-html")
(version "1.21.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "gh_md_to_html" version))
(sha256
(base32 "1cnaqnckpcrpc4b8ba18s5ds05w1yfiszcp7ql7pmx0jnrj25qax"))))
(build-system pyproject-build-system)
(arguments (list #:tests? #false)) ;there are none
(propagated-inputs
(list python-beautifulsoup4
python-emoji-for-gh-md-to-html
python-pillow
python-requests
python-shellescape
python-webcolors))
(home-page "https://github.com/phseiff/github-flavored-markdown-to-html/")
(synopsis "Github-flavored Markdown")
(description
"This package provides a feature-rich Github-flavored Markdown to HTML
Python library and command line interface.")
(license license:expat)))
(define-public python-glymur
(package
(name "python-glymur")
(version "0.13.5")
(source
(origin
(method git-fetch) ; no tests data in PyPi package
(uri (git-reference
(url "https://github.com/quintusdias/glymur")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1n2n7bj5w29w5y2gcl4hxhqf85n0j2crkln9i0mprq3xw8finxpx"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
#~(list "-n" "auto")
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'patch-library-locations
(lambda* (#:key inputs #:allow-other-keys)
;; XXX: It's a workaround for Python inability to find the
;; .so libraries with ctypes.util.find_library()
(substitute* '("glymur/config.py")
(("path = find_library\\(libname\\)")
(string-append
"if libname == \"openjp2\":\n"
" path = \""
(search-input-file inputs "/lib/libopenjp2.so") "\"\n"
" elif libname == \"tiff\":\n"
" path = \""
(search-input-file inputs "/lib/libtiff.so") "\"\n"
" elif libname == \"c\":\n"
" path = \""
(search-input-file inputs "/lib/libc.so.6") "\"\n")))))
(add-before 'check 'disable-failing-tests
(lambda _
;; Failing test due to inability of
;; ctypes.util.find_library() to determine library path,
;; which is patched above.
(delete-file "tests/test_config.py"))))))
(native-inputs
(list python-pytest
python-pytest-xdist
python-scikit-image))
(inputs
(list openjpeg ; glymur/lib/openjp2.py
libtiff)) ; glymur/lib/tiff.py
(propagated-inputs
(list python-lxml
python-numpy
python-packaging))
(home-page "https://github.com/quintusdias/glymur")
(synopsis "Python interface to OpenJPEG and LibTIFF")
(description
"This package provides Python interface to the OpenJPEG library which
allows one to read and write JPEG 2000 files")
(license license:expat)))
(define-public python-gphoto2
(package
(name "python-gphoto2")
(version "2.2.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "gphoto2" version))
(sha256
(base32
"118zm25c8mlajfl0pzssnwz4b8lamj9dgymla9rn4nla7l244a0r"))))
(build-system python-build-system)
(native-inputs
(list pkg-config))
(inputs
(list libgphoto2))
(home-page "https://github.com/jim-easterbrook/python-gphoto2")
(synopsis "Python interface to libgphoto2")
(description "@code{python-gphoto2} is a comprehensive Python interface
(or binding) to @code{libgphoto2}. It is built using @code{SWIG} to
automatically generate the interface code.")
(license license:gpl3+)))
(define-public python-colour
(package
(name "python-colour")
(version "0.1.5")
(source (origin
(method url-fetch)
(uri (pypi-uri "colour" version))
(sha256
(base32
"1visbisfini5j14bdzgs95yssw6sm4pfzyq1n3lfvbyjxw7i485g"))))
(build-system python-build-system)
(native-inputs
(list python-d2to1))
(home-page "https://github.com/vaab/colour")
(synopsis "Convert and manipulate various color representations")
(description "Pythonic way to manipulate color representations (HSL, RVB,
web, X11, ...).")
(license license:expat)))
(define-public python-d2to1
(package
(name "python-d2to1")
(version "0.2.12.post1")
(source (origin
(method url-fetch)
(uri (pypi-uri "d2to1" version))
(sha256
(base32
"09fq7pq1z8d006xh5z75rm2lk61v6yn2xhy53z4gsgibhqb2vvs9"))))
(build-system python-build-system)
(native-inputs
(list python-nose))
(home-page "https://github.com/embray/d2to1")
(synopsis "Allows for distutils2-like setup.cfg files as package metadata
in python")
(description "The python package d2to1 (the d is for distutils) allows
using distutils2-like setup.cfg files for a package's metadata with a
distribute/setuptools setup.py script.")
(license license:bsd-2)))
(define-public python-rawkit
(package
(name "python-rawkit")
(version "0.6.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "rawkit" version))
(sha256
(base32
"0vrhrpr70i61y5q5ysk341x1539ff1q1k82g59zq69lv16s0f76s"))))
(build-system python-build-system)
(native-inputs
(list python-pytest python-mock))
(inputs
(list libraw))
(home-page "https://rawkit.readthedocs.io")
(synopsis "Ctypes-based LibRaw binding for Python")
(description "The rawkit package provides two modules: rawkit and libraw.
The rawkit module provides a high-level Pythonic interface for developing raw
photos, while the libraw module provides a CTypes based interface for
interacting with the low-level LibRaw C APIs.")
(license license:expat)))
(define-public python-easygui
(package
(name "python-easygui")
(version "0.98.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "easygui" version))
(sha256
(base32
"1zmvmwgxyzvm83818skhn8b4wrci4kmnixaax8q3ia5cn7xrmj6v"))))
(build-system python-build-system)
(propagated-inputs
(list `(,python "tk")))
(home-page "https://github.com/robertlugg/easygui")
(synopsis "GUI programming module for Python")
(description "EasyGUI is a module for very simple, very easy GUI
programming in Python. EasyGUI is different from other GUI generators in that
EasyGUI is NOT event-driven. Instead, all GUI interactions are invoked by
simple function calls.")
(license license:bsd-3)))
(define-public python-echo
(package
(name "python-echo")
(version "0.8.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "echo" version))
(sha256
(base32 "1hr2kgjmf5gcjbg1mry03ca1dayfwy8mi8as42jfg0apsa3bfvvj"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-before 'check 'start-xorg-server
(lambda _
;; The test suite requires a running X server.
(system "Xvfb :99 -screen 0 1024x768x24 &")
(setenv "DISPLAY" ":99.0"))))))
(propagated-inputs
(list python-numpy
python-qtpy
python-pyqt-6))
(native-inputs
(list python-pytest
python-pytest-cov
python-setuptools-scm
xorg-server-for-tests))
(home-page "https://github.com/glue-viz/echo")
(synopsis "Callback Properties in Python")
(description
"Echo is a small library for attaching callback functions to property
state changes.")
(license license:expat)))
(define-public python-pymd4c
(package
(name "python-pymd4c")
(version "0.4.6.0b1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pymd4c" version))
(sha256
(base32 "07s3arn85ri92im6x3ipljdmrxmpik7irs06i6lm17j1x6j9841d"))))
(build-system python-build-system)
(inputs
(list md4c))
(native-inputs
(list python-flake8 python-pkgconfig pkg-config))
(home-page "https://github.com/dominickpastore/pymd4c")
(synopsis "Python bindings for MD4C")
(description
"PyMD4C provides Python bindings for MD4c, a C Markdown parser, compliant
to CommonMark.")
(license license:expat)))
(define-public python-pymediainfo
(package
(name "python-pymediainfo")
(version "4.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pymediainfo" version))
(sha256
(base32
"0mhpxs7vlqx8w75z93dy7nnvx89kwfdjkla03l19an15rlyqyspd"))))
(build-system python-build-system)
(native-inputs
(list python-setuptools-scm python-pytest))
(inputs
(list libmediainfo))
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch-libmediainfo
(lambda _
(substitute* "pymediainfo/__init__.py"
(("libmediainfo.so.0")
(search-input-file %build-inputs
"/lib/libmediainfo.so.0")))))
(replace 'check
(lambda* (#:key tests? inputs outputs #:allow-other-keys)
(when tests?
(add-installed-pythonpath inputs outputs)
;; Skip the only failing test "test_parse_url" because it tries
;; to access the internet.
(invoke "pytest" "-vv" "-k" "not test_parse_url")))))))
(home-page
"https://github.com/sbraz/pymediainfo")
(synopsis
"Python wrapper for the mediainfo library")
(description
"This package provides a Python wrapper for the mediainfo library to
access the technical and tag data for video and audio files.")
(license license:expat)))
(define-public python-psutil
(package
(name "python-psutil")
(version "5.9.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "psutil" version))
(sha256
(base32 "0p1bf6ndcssqh0ic828ggwhzhm67mzj3ffq6043v0fvc1fhn3f7y"))))
(build-system python-build-system)
(arguments
;; FIXME: some tests do not return and time out. Some tests fail because
;; some processes survive kill().
'(#:tests? #f))
(home-page "https://github.com/giampaolo/psutil")
(synopsis "Library for retrieving information on running processes")
(description
"@code{psutil} (Python system and process utilities) is a library for
retrieving information on running processes and system utilization (CPU,
memory, disks, network) in Python. It is useful mainly for system monitoring,
profiling and limiting process resources and management of running processes.
It implements many functionalities offered by command line tools such as: ps,
top, lsof, netstat, ifconfig, who, df, kill, free, nice, ionice, iostat,
iotop, uptime, pidof, tty, taskset, pmap.")
(license license:bsd-3)))
(define-public python-scapy
(package
(name "python-scapy")
(version "2.5.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "scapy" version))
(sha256
(base32
"1hpbbmpcn4dwj3z7i7sz4cnbpkaf57p7mvl3p84x9n2gflmhq9jv"))))
(arguments
'(#:tests? #f)) ; There is a test directory, but apparently no
; automatic testing framework.
;; The package has more optional dependencies such as ipython and
;; matplotlib. If functionality is missing, these should be added.
;; See
;; https://scapy.readthedocs.io/en/latest/installation.html#optional-dependencies
(build-system python-build-system)
(home-page "https://scapy.net")
(synopsis "Python network packet crafting library")
(description
"Scapy is a Python library and executable for interactively
manipulating network packets. It can forge or decode packets of a number
of protocols, send them on the wire, capture them, store or read them
using pcap files, match requests and replies, and so on.
It can handle tasks such as scanning, tracerouting, probing, unit tests,
attacks or network discovery.")
(license license:gpl2)))
(define-public python-icmplib
(package
(name "python-icmplib")
(version "3.0.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "icmplib" version))
(sha256
(base32 "1phnlgbb5di79ijm55pyd5jj1ggss4b6nn6mw701h501vcn8z1jp"))))
(arguments
'(#:tests? #f)) ;test data not present
(build-system python-build-system)
(home-page "https://github.com/ValentinBELYN/icmplib")
(synopsis
"Python implementation of the Internet Control Message Protocol (ICMP)")
(description
"@code{icmplib} is a supporting library for both IPv4 and IPv6 networks.
ICMP is typically used for diagnostic or control purposes - well known from
utilities such as ping(1).")
(license license:lgpl3)))
(define-public python-rasterio
(package
(name "python-rasterio")
(version "1.3.7")
(source (origin
(method url-fetch)
(uri (pypi-uri "rasterio" version))
(sha256
(base32
"012341c1rlcdr9rkg97lbhxrwzn4sr2xah4zjfnqy2r1227wpzdb"))))
(properties
'((updater-ignored-native-inputs . ("gdal" "python-cython"))))
(build-system pyproject-build-system)
(arguments
(list
#:tests? #false ;test data not present
#:phases
'(modify-phases %standard-phases
(add-before 'check 'build-extensions
(lambda _
;; Cython extensions have to be built before running the tests.
(invoke "python" "setup.py" "build_ext" "--inplace"))))))
(propagated-inputs (list python-affine
python-attrs
python-certifi
python-click
python-click-plugins
python-cligj
python-numpy
python-setuptools
python-snuggs))
(native-inputs (list gdal
python-boto3
python-cython
python-hypothesis
python-packaging
python-pytest
python-pytest-cov
python-shapely))
(home-page "https://github.com/rasterio/rasterio")
(synopsis "Fast and direct raster I/O for use with Numpy and SciPy")
(description "This package implements fast and direct raster I/O for use
with Numpy and SciPy.")
(license license:bsd-3)))
(define-public python-shapely
(package
(name "python-shapely")
(version "2.0.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "shapely" version))
(sha256
(base32 "0cpyziixzdj7xqkya4k6fwr0qmrw8k84fsrx6p5sdgw6qxmkdwmz"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
'(modify-phases %standard-phases
(add-before 'check 'build-extensions
(lambda _
;; Cython extensions have to be built before running the tests.
(invoke "python" "setup.py" "build_ext" "--inplace"))))))
(native-inputs
(list python-cython python-matplotlib python-pytest))
(inputs
(list geos))
(propagated-inputs
(list python-numpy))
(home-page "https://github.com/shapely/shapely")
(synopsis "Library for the manipulation and analysis of geometric objects")
(description "Shapely is a Python package for manipulation and analysis of
planar geometric objects. It is based on the @code{GEOS} library.")
(license license:bsd-3)))
(define-public python-shortuuid
(package
(name "python-shortuuid")
(version "0.5.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "shortuuid" version))
(sha256
(base32
"1f8i4zwj5vmpzbz6b17bljy4399gx5aq7vsyw63sz2qgyjcd73yh"))))
(build-system python-build-system)
(native-inputs
(list python-pep8))
(home-page "https://github.com/skorokithakis/shortuuid")
(synopsis "Generator library for concise, unambiguous and URL-safe UUIDs")
(description
"@code{shortuuid} is a Python library for generating concise, unambiguous
and URL-safe UUIDs. UUIDs are generated using the built-in Python @code{uuid}
module and then similar looking characters are removed.")
(license license:bsd-3)))
(define-public python-logwrap
(package
(name "python-logwrap")
(version "8.2.0.post0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "logwrap" version))
(sha256
(base32
"1dv7gny3rfci5cal2ipr6d0pcz3yhka7af96dfsd3ir1mxy8p1j9"))))
(build-system python-build-system)
(arguments
`(#:tests? #f ; Tests not included in pypi release.
#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest"))
#t)))))
(native-inputs
(list python-cython python-pytest python-setuptools-scm python-toml
python-wheel))
(home-page "https://github.com/python-useful-helpers/logwrap")
(synopsis "Decorator for logging function arguments")
(description "This package provides a decorator to log function arguments
and function call return values in a human-readable way.")
(license license:asl2.0)))
(define-public python-clyent
(package
(name "python-clyent")
(version "1.2.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "clyent" version))
(sha256
(base32
"1r9987qmy1pz3hq54160bapqsywpq14waw4w9x3ly8hmq7kpgfbj"))))
(build-system python-build-system)
(native-inputs
(list python-mock))
(home-page "https://github.com/Anaconda-Platform/clyent")
(synopsis "Command line client library")
(description "Clyent is a Python command line utility library. It is used
by @code{binstar}, @code{binstar-build}, and @code{chalmers}.")
(license license:bsd-3)))
(define-public python-babel
(package
(name "python-babel")
(version "2.10.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Babel" version))
(sha256
(base32
"0l9cvfmsz0hlvcinxaf6xf2f02ldgw3xq9i1fc7lk5zf24vma53n"))))
(build-system python-build-system)
(native-inputs
(list python-freezegun python-pytest tzdata-for-tests))
(propagated-inputs
(list python-pytz))
(arguments
`(#:phases (modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "pytest" "-vv"))))))
(home-page "https://babel.pocoo.org/")
(synopsis
"Tools for internationalizing Python applications")
(description
"Babel is composed of two major parts:
- tools to build and work with gettext message catalogs
- a Python interface to the CLDR (Common Locale Data Repository), providing
access to various locale display names, localized number and date formatting,
etc.")
(license license:bsd-3)))
(define-public python-bidict
(package
(name "python-bidict")
(version "0.21.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "bidict" version))
(sha256
(base32
"02dy0b1k7qlhn7ajyzkrvxhyhjj0hzcq6ws3zjml9hkdz5znz92g"))))
(build-system python-build-system)
(native-inputs
(list python-coverage
python-hypothesis
python-py
python-pytest
python-pytest-benchmark
python-pytest-cov
python-setuptools-scm
python-sortedcollections
python-sortedcontainers
python-sphinx
python-sphinx-autodoc-typehints
python-tox))
(arguments
`(#:phases (modify-phases %standard-phases
(add-after 'unpack 'relax-reqs
(lambda _
(substitute* "setup.py"
(("sortedcollections < 2") "sortedcollections"))
#t))
(replace 'check
(lambda _ (invoke "./run_tests.py"))))))
(home-page "https://bidict.readthedocs.io")
(synopsis "Bidirectional mapping library")
(description "The @code{bidict} library provides several data structures
for working with bidirectional mappings in Python.")
(license license:mpl2.0)))
(define-public python-bip39
(package
(name "python-bip39")
(version "0.0.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "bip39" version))
(sha256
(base32 "18m7d3gi7vj2zi0bl1z7m0nhcj6i8j9vj4vil276siagnpkv64ry"))))
(build-system python-build-system)
(native-inputs (list python-pytest))
(home-page "https://github.com/de-centralized-systems/python-bip39/")
(synopsis "Self-contained and simple BIP39 implementation in Python")
(description
"This package provides a self-contained and simple BIP39
implementation written in Python. It includes a @code{bip39.py} executable.
BIP39 is a standardized mapping between binary data (the @emph{entropy}),
and a list of words that are easier to remember for humans (the
@emph{mnemonic}).")
(license license:expat)))
(define-public python-bitarray
(package
(name "python-bitarray")
(version "2.8.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "bitarray" version))
(sha256
(base32
"1wy80bmhg33bpzn28g1n7s8r8f4drj7pcl4m2qb5sql8bbryx376"))))
(build-system python-build-system)
(arguments
(list #:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
;; Step out of the source directory to avoid interference.
(with-directory-excursion "/tmp"
(invoke "python" "-c"
"import bitarray; bitarray.test()"))))))))
(home-page "https://github.com/ilanschnell/bitarray")
(synopsis "Efficient arrays of booleans")
(description "This package provides an object type which efficiently
represents an array of booleans. Bitarrays are sequence types and behave very
much like usual lists. Eight bits are represented by one byte in a contiguous
block of memory. The user can select between two representations:
little-endian and big-endian. All of the functionality is implemented in C.
Methods for accessing the machine representation are provided. This can be
useful when bit level access to binary files is required, such as portable
bitmap image files. Also, when dealing with compressed data which uses
variable bit length encoding, you may find this module useful.")
(license license:psfl)))
(define-public python-boolean.py
(package
(name "python-boolean.py")
(version "4.0")
(source
(origin
;; There's no source tarball on PyPI.
(method git-fetch)
(uri (git-reference
(url "https://github.com/bastikr/boolean.py")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1s4mrgqf1phwvda81dpnlkdadcbjgpl8mjvmc1yjlrp1c368v9lb"))))
(build-system python-build-system)
(home-page "https://github.com/bastikr/boolean.py")
(synopsis "Boolean algebra in one Python module")
(description
"This is a small Python library that implements boolean algebra.
It defines two base elements, @code{TRUE} and @code{FALSE}, and a
@code{Symbol} class that can take on one of these two values. Calculations
are done only in terms of @code{AND}, @code{OR}, and @code{NOT}---other
compositions like @code{XOR} and @code{NAND} are emulated on top of them.
Expressions are constructed from parsed strings or directly in Python.")
(license license:bsd-2)))
(define-public python-hdf4
(package
(name "python-hdf4")
(version "0.9")
(source
(origin
(method url-fetch)
(uri (pypi-uri name version))
(sha256
(base32
"1hjiyrxvxk9817qyqky3nar4y3fs4z8wxz0n884zzb5wi6skrjks"))))
(build-system python-build-system)
(native-inputs `(("nose" ,python-nose)))
(propagated-inputs `(("numpy" ,python-numpy)))
(inputs
`(("hdf4" ,hdf4)
("libjpeg" ,libjpeg-turbo)
("zlib" ,zlib)))
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "./runexamples.sh")
(invoke "nosetests" "-v"))))))
(home-page "https://github.com/fhs/python-hdf4")
(synopsis "Python interface to the NCSA HDF4 library")
(description
"Python-HDF4 is a python wrapper around the NCSA HDF version 4 library,
which implements the SD (Scientific Dataset), VS (Vdata) and V (Vgroup) API’s.
NetCDF files can also be read and modified. Python-HDF4 is a fork of
@url{http://hdfeos.org/software/pyhdf.php,pyhdf}.")
(license license:expat)))
(define-public python-h5netcdf
(package
(name "python-h5netcdf")
(version "1.3.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "h5netcdf" version))
(sha256
(base32 "1kw3cf01kziwxmb84x0cy6vbpsmqjm0k1dm34i6b4d7bv8kw0wd1"))))
(build-system pyproject-build-system)
(native-inputs
(list python-netcdf4
python-pytest
python-setuptools-scm))
(propagated-inputs
(list python-h5py python-packaging))
(home-page "https://h5netcdf.org")
(synopsis "Python interface for the netCDF4 file-format based on h5py")
(description "This package provides a Python interface for the netCDF4
file-format that reads and writes local or remote HDF5 files directly via
@url{h5py, https://www.h5py.org/} or @url{h5pyd,
https://github.com/HDFGroup/h5pyd}, without relying on the Unidata netCDF
library.")
(license license:bsd-3)))
(define-public python-h5py
(package
(name "python-h5py")
(version "3.8.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "h5py" version))
(sha256
(base32 "0pyr6z4h2xqbp49yx2i1401gl6yqh03h771zslwcy0201hpxiskg"))))
(build-system python-build-system)
(arguments
'(#:phases (modify-phases %standard-phases
(add-after 'unpack 'fix-hdf5-paths
(lambda* (#:key inputs #:allow-other-keys)
(setenv "HDF5_DIR"
(assoc-ref inputs "hdf5")))))))
(propagated-inputs (list python-six python-numpy))
(inputs (list hdf5-1.10))
(native-inputs (list pkg-config python-cython python-ipython
python-pkgconfig python-pytest))
(home-page "https://www.h5py.org/")
(synopsis "Read and write HDF5 files from Python")
(description
"The h5py package provides both a high- and low-level interface to the
HDF5 library from Python. The low-level interface is intended to be a
complete wrapping of the HDF5 API, while the high-level component supports
access to HDF5 files, datasets and groups using established Python and NumPy
concepts.")
(license license:bsd-3)))
(define-public python-hdf5storage
(package
(name "python-hdf5storage")
(version "0.1.19")
(source
(origin
(method url-fetch)
(uri (pypi-uri "hdf5storage" version))
(sha256
(base32 "11pgxsqap9l7jsf52649q9mpj8a0w6p9im929lpr9s26ynnnn6ks"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-h5py python-numpy))
(native-inputs (list python-nose))
(home-page "https://github.com/frejanordsiek/hdf5storage")
(synopsis "Read and write Python data types from and to HDF5 files")
(description
"This Python package provides high-level utilities to read and write a
variety of Python types from and to @acronym{HDF5, Hierarchical Data Format}
formatted files. This package also provides support for MATLAB MAT v7.3
formatted files, which are HDF5 files with a different extension and some
extra metadata. Because HDF5 and MAT files might need to be read from
untrusted sources, pickling is avoided in this package.")
(license license:bsd-2)))
(define-public python-hjson
;; Using commit from master branch as the PyPI version does not contain
;; the hjson/tests/ directory.
(let ((revision "0")
(commit "1687b811fcbbc54b5ac71cfbaa99f805e406fbcb"))
(package
(name "python-hjson")
(version (git-version "3.1.0" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/hjson/hjson-py")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"1qfqnhvfx5mm7bdajjnnagmvns1zxyksjzh3k5la2ag6a8bp5gki"))))
(build-system pyproject-build-system)
(home-page "https://github.com/hjson/hjson-py")
(synopsis "Python package to parse HJSON documents")
(description "This package provides a Python library and a command-line
interface utility to parse @url{https://hjson.github.io/, HJSON}) documents.")
(license license:expat))))
(define-public python-hnswlib
(package
(name "python-hnswlib")
(version "0.5.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "hnswlib" version))
(sha256
(base32 "0wf1cwmxmdzfqmfhrkqdxb5spf21ylgl2bidswhzjrqhwf35c9qf"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'disable-native-optimization
(lambda _
(substitute* "setup.py"
((", '-march=native'") "")))))))
(propagated-inputs
(list python-numpy))
(native-inputs
(list pybind11))
(home-page "https://github.com/nmslib/hnswlib")
(synopsis "Fast approximate nearest neighbor search")
(description "Hnswlib is a header-only C++ implementation of fast
approximate nearest neighbor search with Python bindings.")
(license license:asl2.0)))
(define-public python-pylatexenc
(package
(name "python-pylatexenc")
(version "2.10")
(source (origin
(method url-fetch)
(uri (pypi-uri "pylatexenc" version))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"1ls09z47b5md71gkxcj7fd87ynpvv2walgp2w6z31p26xf2gvn1x"))))
(build-system python-build-system)
(home-page "https://github.com/phfaist/pylatexenc")
(synopsis "LaTeX parser for Unicode/LaTeX conversion")
(description
"@code{python-pylatexenc} is a LaTeX parser providing LaTeX-to-Unicode and
Unicode-to-LaTeX conversion.")
(license license:expat)))
(define-public python-pyls-black
(package
(name "python-pyls-black")
(version "0.4.7")
(source
(origin
;; There are no tests in the PyPI tarball.
(method git-fetch)
(uri (git-reference
(url "https://github.com/rupert/pyls-black/")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0bkhfnlik89j3yamr20br4wm8975f20v33wabi2nyxvj10whr5dj"))
(patches (search-patches "python-pyls-black-41.patch"))
;; Patch to work with python-lsp-server. Taken from
;; <https://github.com/rupert/pyls-black/pull/37>.
(modules '((guix build utils)))
(snippet
'(begin
(substitute* "setup.cfg"
(("python-language-server")
"python-lsp-server"))
(substitute* '("pyls_black/plugin.py" "tests/test_plugin.py")
(("pyls_format_document")
"pylsp_format_document")
(("pyls_format_range")
"pylsp_format_range")
(("from pyls([ \\.])" _ char)
(string-append "from pylsp" char)))))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
'(list "-k" "not test_load_config_target_version")))
(propagated-inputs
(list python-black python-lsp-server python-tomli))
(native-inputs
(list python-flake8 python-isort python-mypy python-pytest
python-pytest-runner))
(home-page "https://github.com/rupert/pyls-black")
(synopsis "Black plugin for the Python Language Server")
(description "Black plugin for the Python Language Server.")
(license license:expat)))
(define-public python-sh
(package
(name "python-sh")
(version "1.14.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "sh" version))
(sha256
(base32
"03gyss1rhj4in7pgysg4q0hxp3230whinlpy1532ljs99lrx0ywx"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
;; XXX: A Python 2 test fails when HOME=/homeless-shelter.
(setenv "HOME" "/tmp")
(invoke "python" "sh.py" "test"))))))
(native-inputs
(list python-coverage))
(home-page "https://github.com/amoffat/sh")
(synopsis "Python subprocess replacement")
(description "This package provides a replacement for Python's
@code{subprocess} feature.")
(license license:expat)))
(define-public python-cftime
(package
(name "python-cftime")
(version "1.6.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "cftime" version))
(sha256
(base32 "1lp6jrjjgl18csn4bcnphn0l16ag4aynvn7x0kins155p07w0546"))))
(build-system pyproject-build-system)
(propagated-inputs
(list python-numpy))
(native-inputs
(list python-check-manifest
python-coverage
python-coveralls
python-cython
python-pytest-cov
python-sphinx
python-twine
python-wheel))
(home-page "https://unidata.github.io/cftime/")
(synopsis "Library for time handling")
(description
"This package provides time-handling functionality that used to be part
of the netcdf4 package before.")
(license license:expat)))
(define-public python-netcdf4
(package
(name "python-netcdf4")
(version "1.6.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "netCDF4" version))
(sha256
(base32
"0qxs8r1qmsmg760wm5q0wqlcm7hdd3k7cghryw6wvqd3v5rs7vwm"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'configure-locations
(lambda* (#:key inputs #:allow-other-keys)
(setenv "HDF5_DIR" (assoc-ref inputs "hdf5"))
#t)))))
(native-inputs
(list python-cython))
(propagated-inputs
(list python-numpy python-cftime))
(inputs
(list netcdf hdf4 hdf5))
(home-page "https://github.com/Unidata/netcdf4-python")
(synopsis "Python/numpy interface to the netCDF library")
(description "Netcdf4-python is a Python interface to the netCDF C
library. netCDF version 4 has many features not found in earlier
versions of the library and is implemented on top of HDF5. This module
can read and write files in both the new netCDF 4 and the old netCDF 3
format, and can create files that are readable by HDF5 clients. The
API is modelled after @code{Scientific.IO.NetCDF}, and should be familiar
to users of that module.")
;; The software is mainly ISC, but includes some files covered
;; by the Expat license.
(license (list license:isc license:expat))))
(define-public python-ncclient
(package
(name "python-ncclient")
(version "0.6.12")
(source
(origin
(method git-fetch) ;no tests in PyPI release
(uri (git-reference
(url "https://github.com/ncclient/ncclient")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0cb568z5syg6hh0dv813bw7s1mjy7ga5xzxbm9naf4zz2qfdg4js"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest")))))))
(native-inputs
(list python-pytest))
(propagated-inputs
(list python-lxml python-paramiko))
(home-page "https://github.com/ncclient/ncclient")
(synopsis "Python library for NETCONF clients")
(description "@code{ncclient} is a Python library that facilitates
client-side scripting and application development around the NETCONF
protocol.")
(license license:asl2.0)))
(define-public python-ncls
(package
(name "python-ncls")
(version "0.0.65")
(source (origin
(method url-fetch)
(uri (pypi-uri "ncls" version))
(sha256
(base32
"1wx06xqknd2r98w8z93f47g5dpxzn92kamhj8vkq0nj569hf7cg1"))))
(build-system python-build-system)
(propagated-inputs (list python-numpy))
(home-page "https://github.com/endrebak/ncls")
(synopsis "Nested containment list data structure")
(description
"This package provides a wrapper for the nested containment list data
structure. It is a static interval-tree that is fast for both construction
and lookups.")
(license license:bsd-3)))
(define-public python-license-expression
(package
(name "python-license-expression")
(version "30.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "license-expression" version))
(sha256
(base32 "0lvshl2fhwa568d3y3vmx45hdp8gk5w9yl3b2q5d66r5vqn1sfwl"))))
(build-system pyproject-build-system)
(native-inputs
(list python-setuptools-scm python-pytest))
(propagated-inputs
(list python-boolean.py))
(home-page "https://github.com/nexB/license-expression")
(synopsis "Apply boolean logic to license expressions")
(description
"This Python module defines a tiny language to evaluate and compare
license expressions using boolean logic. Logical combinations of licenses can
be tested for equality, containment, and equivalence. They can be normalised
and simplified. It supports SPDX license expressions as well as other naming
conventions and aliases in the same expression.")
(license license:gpl2+)))
(define-public python-wand
(package
(name "python-wand")
(version "0.6.13")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Wand" version))
(sha256
(base32 "1jpwm956vm35hmgjndr2jwrcql0bwvpsl88q5nr0x8ppxa2380gm"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'hardcode-lib-path
(lambda _
(substitute* "wand/api.py"
(("os\\.environ\\.get\\('MAGICK_HOME'\\)")
(string-append "\"" #$(this-package-input "imagemagick") "\""))
(("os\\.environ\\.get\\('WAND_MAGICK_LIBRARY_SUFFIX'\\)")
"\".Q16\"")))))))
(native-inputs
(list python-pytest))
(inputs
(list imagemagick))
(home-page "https://docs.wand-py.org/")
(synopsis "MagickWand API binding for Python")
(description
"Wand is a ctypes-based binding for ImageMagick's MagickWand library.")
(license license:expat)))
(define-public python-lockfile
(package
(name "python-lockfile")
(version "0.12.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "lockfile" version))
(sha256
(base32
"16gpx5hm73ah5n1079ng0vy381hl802v606npkx4x8nb0gg05vba"))))
(build-system python-build-system)
(arguments '(#:test-target "check"))
(native-inputs
(list python-pbr))
(home-page "https://launchpad.net/pylockfile")
(synopsis "Platform-independent file locking module")
(description
"The lockfile package exports a LockFile class which provides a simple
API for locking files.")
(license license:expat)))
(define-public python-fb-re2
(package
(name "python-fb-re2")
(version "1.0.7")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/facebook/pyre2")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0snprxdnh3m45r3b0az4v0l28h90ycmfbybzla6xg1qviwv9w1ak"))))
(build-system python-build-system)
(inputs
(list re2))
(home-page "https://github.com/facebook/pyre2")
(synopsis "Python wrapper for RE2")
(description "This package provides a Python extension that wraps Google's
RE2 regular expression library. It implements many of the features of
Python's built-in @code{re} module with compatible interfaces.")
(license license:bsd-3)))
(define-public python-filelock
(package
(name "python-filelock")
(version "3.0.12")
(source
(origin
(method url-fetch)
(uri (pypi-uri "filelock" version))
(sha256
(base32
"0ngzlvb5j8gqs2nxlp2b0jhzii792h66wsn694qm8kqixr225n0q"))))
(build-system python-build-system)
(home-page "https://github.com/tox-dev/py-filelock")
(synopsis "Platform independent file lock")
(description "@code{filelock} contains a single module implementing
a platform independent file lock in Python, which provides a simple way of
inter-process communication.")
(license license:unlicense)))
(define-public python-filelock-3.5
(package
(name "python-filelock")
(version "3.5.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "filelock" version))
(sha256
(base32
"058av1r760ws7z6qffsjpqa39fmdxw0s1wnyr7p50y3zclg6cyqk"))))
(build-system pyproject-build-system)
(native-inputs (list python-pytest python-setuptools-scm))
(home-page "https://github.com/tox-dev/py-filelock")
(synopsis "Platform independent file lock")
(description "@code{filelock} contains a single module implementing
a platform independent file lock in Python, which provides a simple way of
inter-process communication.")
(license license:unlicense)))
(define-public python-semantic-version
(package
(name "python-semantic-version")
(version "2.8.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "semantic_version" version))
(sha256
(base32
"0m4avx8zdkzc7qglv5zlr54g8yna5vl098drg5396ql7aph2vjyj"))))
(build-system python-build-system)
(home-page "https://github.com/rbarrois/python-semanticversion")
(synopsis "Semantic versioning module for Python")
(description
"The @code{semantic_version} class is a small library for handling
@uref{https://semver.org/, semantic versioning} (@dfn{SemVer}) in Python.
It can compare versions, generate a new version that represents a bump in one of
the version levels, and check whether any given string is a proper semantic
version identifier.")
(license license:bsd-3)))
(define-public python-serpent
(package
(name "python-serpent")
(version "1.28")
(source
(origin
(method url-fetch)
(uri (pypi-uri "serpent" version))
(sha256
(base32 "1arnckykpkvv2qrp49l1k7q5mr5pisswl0rvdx98x8wsl1n361pk"))))
(build-system python-build-system)
(native-inputs
(list python-attrs python-pytz))
(home-page "https://github.com/irmen/Serpent")
(synopsis "Serializer for literal Python expressions")
(description
"Serpent provides @code{ast.literal_eval()}-compatible object tree
serialization. It serializes an object tree into bytes (an utf-8 encoded
string) that can be decoded and then passed as-is to @code{ast.literal_eval()}
to rebuild the original object tree.
Because only safe literals are encoded, it is safe to send serpent data to
other machines, such as over the network.")
(license license:expat)))
(define-public python-setuptools-declarative-requirements
(package
(name "python-setuptools-declarative-requirements")
(version "1.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri
"setuptools-declarative-requirements"
version))
(sha256
(base32
"1l8zmcnp9h8sp8hsw7b81djaa1a9yig0y7i4phh5pihqz1gdn7yi"))))
(build-system python-build-system)
(native-inputs
(list python-pytest python-setuptools-scm))
(propagated-inputs
(list python-toml python-wheel))
(home-page
"https://github.com/s0undt3ch/setuptools-declarative-requirements")
(synopsis "File support for setuptools declarative setup.cfg")
(description
"This package provides file support for setuptools declarative
@code{setup.cfg}.")
(license license:asl2.0)))
;; The setuptools provided by Python 3.9 is too new for Tensorflow.
(define-public python-setuptools-for-tensorflow
(hidden-package
(package
(inherit python-setuptools)
(version "39.1.0")
(source (origin
(inherit (package-source python-setuptools))
(uri (pypi-uri "setuptools" version ".zip"))
(sha256
(base32
"1mzdhvfhnv4lggxa8rjl0dzqxvfx377gg5sqs57v89wrp09lwj65"))))
(arguments
`(#:tests? #f ; tests require vendored resources
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'compatibility-fixes
(lambda _
;; Python 3.9 no longer has HTMLParser
(substitute* "setuptools/py33compat.py"
(("html_parser.HTMLParser\\(\\).unescape")
"html.unescape"))
;; collections classes have moved in Python 3.10
(substitute* "pkg_resources/_vendor/pyparsing.py"
(("collections.MutableMapping")
"collections.abc.MutableMapping")
(("collections.Iterable")
"collections.abc.Iterable"))
;; This needs distutils.msvc9compiler
(delete-file "setuptools/tests/test_msvc.py")
;; See https://github.com/pypa/setuptools/issues/2558
(delete-file "setuptools/command/bdist_wininst.py")
(substitute* "setuptools/command/install_scripts.py"
(("bw_cmd =.*") "\n")
(("is_wininst =.*")
"is_wininst = False\n")))))))
(native-inputs
(list python-pytest python-mock python-six)))))
(define-public python-uniseg
(package
(name "python-uniseg")
(version "0.7.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "uniseg" version ".zip"))
(sha256
(base32
"05jsazvz6nbmh6l3v1rph5ydkqn1hzx1pyggdyvgp2qgmgrnmiz2"))))
(build-system python-build-system)
(arguments
'(#:tests? #f)) ; The test suite requires network access.
(native-inputs
(list unzip))
(home-page
"https://bitbucket.org/emptypage/uniseg-python")
(synopsis
"Python library to determine Unicode text segmentations")
(description
"Uniseg is a Python package used to determine Unicode text segmentations.
Supported segmentations include:
@enumerate
@item @dfn{Code point} (any value in the Unicode codespace)
@item @dfn{Grapheme cluster} (user-perceived character made of a single or
multiple Unicode code points, e.g. \"G\" + acute-accent)
@item Word break
@item Sentence break
@item Line break
@end enumerate")
(license license:expat)))
(define-public python-humanfriendly
(package
(name "python-humanfriendly")
(version "8.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "humanfriendly" version))
(sha256
(base32
"04ixg8b7p6xc8x8lffhi7wfl77xhszakhd0s6j0cf6a84j8yqlmz"))))
(build-system python-build-system)
(arguments
`(;; XXX: Tests depend on coloredlogs, which in turn depends on humanfriendly.
#:tests? #f))
(home-page "https://humanfriendly.readthedocs.io")
(synopsis "Human-friendly input and output in Python")
(description
"The functions and classes in @code{humanfriendly} can be used to make
text interfaces more user-friendly. It includes tools to parse and format
numbers, file sizes, and timespans, timers for long-running operations, menus
to allow the user to choose from a list of options, and terminal interaction
helpers.")
(license license:expat)))
(define-public python-textparser
(package
(name "python-textparser")
(version "0.23.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "textparser" version))
(sha256
(base32
"0w5lyhrsvzs5a9q1l3sjgxgljrvd3ybf796w93kc39wayzvd02gh"))))
(build-system python-build-system)
(home-page "https://github.com/eerimoq/textparser")
(synopsis "Fast text parser for Python")
(description "This library provides a text parser written in the Python
language. It aims to be fast.")
(license license:expat)))
(define-public python-aenum
(package
(name "python-aenum")
(version "3.1.12")
(source
(origin
(method url-fetch)
(uri (pypi-uri "aenum" version))
(sha256
(base32 "1w1ffkcxgnimi5w8802qk6w2qxz9k8hpvsg6yy2zi08ahs8iqlry"))
(modules '((guix build utils)))
(snippet
;; Delete the Python 2 specific files which won't compile
;; in Python 3.
'(for-each delete-file (find-files "." "_py2.py$")))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(replace 'check
(lambda _
;; We must run the test suite module directly, as it
;; fails to define the 'tempdir' variable in scope for
;; the tests otherwise
;; (see:https://bitbucket.org/stoneleaf/aenum/\
;; issues/32/running-tests-with-python-setuppy-test).
(invoke "python3" "aenum/test.py")
;; This one fails with "NameError: name
;; 'test_pickle_dump_load' is not defined" (see:
;; https://bitbucket.org/stoneleaf/aenum/issues/33
;; /error-running-the-test_v3py-test-suite).
;; (invoke "python3" "aenum/test_v3.py")
#t)))))
(home-page "https://bitbucket.org/stoneleaf/aenum")
(synopsis "Advanced enumerations, namedtuples and constants for Python")
(description "The aenum library includes an @code{Enum} base class, a
metaclass-based @code{NamedTuple} implementation and a @code{NamedConstant}
class.")
(license license:bsd-3)))
(define-public python-can
(package
(name "python-can")
(version "4.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "python-can" version))
(sha256
(base32
"1w5sdzxivpd3pw4pypwnjlksvfimdb93qnlddbrh5f13flhsgg8g"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
#~(list
;; TODO: Check if it could be packed:
;; https://github.com/projectgus/python-canalystii
;;
;; Disable tests which require specific CAN drivers we have no
;; package for in Guix.
"--ignore" "test/test_interface_canalystii.py"
;; These tests fail with "OSError: [Errno 19] No such device".
"-k" "not BasicTestUdpMulticastBusIPv")))
(propagated-inputs
(list python-msgpack python-typing-extensions python-wrapt))
(native-inputs
(list ;; python-canalystii ; Not packed yet
python-codecov
python-coverage
python-future
python-hypothesis
python-mock
python-parameterized
python-pyserial
python-pytest
python-pytest-cov
python-pytest-runner
python-pytest-timeout))
(home-page "https://github.com/hardbyte/python-can")
(synopsis "Controller Area Network (CAN) interface module for Python")
(description "This package defines the @code{can} module, which provides
controller area network (CAN) support for Python developers; providing common
abstractions to different hardware devices, and a suite of utilities for
sending and receiving messages on a CAN bus.")
(license license:lgpl3+)))
(define-public python-canmatrix
(package
(name "python-canmatrix")
(version "1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "canmatrix" version))
(sha256
(base32 "046dzmggfm6h0fvfvwrblvih0blhc70ma0pqxzry3cphc08jvsrg"))
;; The test suite uder ./test is a legacy test suite. The new test
;; suite is defined under src/canmatrix/tests.
(modules '((guix build utils)))
(snippet '(delete-file-recursively "test"))))
(build-system python-build-system)
(arguments
'(#:phases (modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest")))))))
(propagated-inputs (list python-attrs python-click python-future
python-six))
(native-inputs (list python-lxml python-pytest python-xlrd python-xlwt))
(home-page "https://github.com/ebroecker/canmatrix")
(synopsis "@acronym{CAN, Controller Area Network} matrices in Python")
(description
"This package implements a @acronym{CAN, Controller Area Network} matrix
object in Python which describes the CAN-communication and its needed objects
such as board units, frames, signals, and values. It also includes two
command-line tools (@command{canconvert} and @command{cancompare}) for
converting and comparing CAN databases.")
(license license:bsd-2)))
(define-public python-canopen
(package
(name "python-canopen")
(version "2.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "canopen" version))
(sha256
(base32 "1nb543wb37kj95v6bhh272lm5gkpi41q3pnsl1fxlyizm2gamj5w"))))
(build-system python-build-system)
(native-inputs (list python-packaging))
(propagated-inputs (list python-can))
(home-page "https://github.com/christiansandberg/canopen")
(synopsis "CANopen stack implementation")
(description
"This package provides a Python implementation of the
@uref{https://www.can-cia.org/canopen/,CANopen standard} for
@acronym{CANs, controller-area networks}. The aim of the project is to
support the most common parts of the CiA 301 standard in a simple
Pythonic interface. It is mainly targeted for testing and automation
tasks rather than a standard compliant master implementation.")
(license license:expat)))
(define-public python-caniusepython3
(package
(name "python-caniusepython3")
(version "7.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "caniusepython3" version))
(sha256
(base32
"0a755444ln38j8d7xb3yw0wzpd0mjrzfn6zqvsh06nw1vdaq4l28"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(add-after 'unpack 'relax-requirements
(lambda _
(substitute* "setup.py"
;; These are for compatibility with Python 2.
((".*'argparse', 'backports.functools_lru_cache',.*")
""))
(substitute* "dev_requirements.txt"
((".*pylint.*") "")) ;not actually required
#t))
(replace 'check
(lambda _
(invoke "py.test" "-k" "not NetworkTests"))))))
(propagated-inputs
(list python-distlib python-packaging python-requests))
(native-inputs
(list python-mock python-pytest))
(home-page "https://github.com/brettcannon/caniusepython3")
(synopsis "Check for Python 3-incompatible Python libraries")
(description "The @command{caniusepython3} command scans your project and
reports the Python 3-incompatible libraries it found. It can also be used as
a library.")
(license license:asl2.0)))
(define-public python-diskcache
(package
(name "python-diskcache")
(version "4.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "diskcache" version))
(sha256
(base32
"1q2wz5sj16zgyy1zpq516qgbnfwsavk1pl2qks0f4r62z5cmmvmw"))))
(build-system python-build-system)
(arguments
`(#:tests? #f)) ;test suite not included in the release
(home-page "https://www.grantjenks.com/docs/diskcache/")
(synopsis "Disk and file backed cache library")
(description "DiskCache is a disk and file backed persistent cache.")
(license license:asl2.0)))
(define-public python-optparse-pretty
(package
(name "python-optparse-pretty")
(version "0.1.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "optparse-pretty" version))
(sha256
(base32 "1920wbh2b7a8qn7zx2iiqbcdaax335l81a73x9pp8h11yzs2jdmh"))))
(build-system pyproject-build-system)
(arguments (list #:tests? #false)) ;There are none
(home-page "https://github.com/gvalkov/optparse-pretty")
(synopsis "Compact help formatter for optparse")
(description
"This module provides two help formatters for optparse. They provide
terser and more customizable option formatting in comparison to the default
help formatter.")
(license license:bsd-3)))
(define-public python-orjson
(package
(name "python-orjson")
(version "3.9.7")
(source (origin
(method url-fetch)
(uri (pypi-uri "orjson" version))
(sha256
(base32
"0hh1j7akxgx1nvsnwx1p4f4h4pkgr7v9aqr99l2pwbwfyyc93qw5"))))
(build-system cargo-build-system)
(arguments
(list
#:imported-modules `(,@%cargo-build-system-modules
,@%pyproject-build-system-modules)
#:modules '((guix build cargo-build-system)
((guix build pyproject-build-system) #:prefix py:)
(guix build utils))
#:phases
#~(modify-phases %standard-phases
(add-after 'build 'build-python-module
(assoc-ref py:%standard-phases 'build))
(add-after 'build-python-module 'install-python-module
(assoc-ref py:%standard-phases 'install)))
#:cargo-inputs
`(("rust-ahash" ,rust-ahash-0.8)
("rust-arrayvec" ,rust-arrayvec-0.7)
("rust-associative-cache" ,rust-associative-cache-1)
("rust-beef" ,rust-beef-0.5)
("rust-bytecount" ,rust-bytecount-0.6)
("rust-chrono" ,rust-chrono-0.4)
("rust-compact-str" ,rust-compact-str-0.7)
("rust-encoding-rs" ,rust-encoding-rs-0.8)
("rust-itoa" ,rust-itoa-1)
("rust-itoap" ,rust-itoap-1)
("rust-once-cell" ,rust-once-cell-1)
("rust-pyo3-ffi" ,rust-pyo3-ffi-0.19)
("rust-ryu" ,rust-ryu-1)
("rust-serde" ,rust-serde-1)
("rust-serde-json" ,rust-serde-json-1)
("rust-simdutf8" ,rust-simdutf8-0.1)
("rust-smallvec" ,rust-smallvec-1)
("rust-cc" ,rust-cc-1)
("rust-pyo3-build-config" ,rust-pyo3-build-config-0.19)
("rust-version-check" ,rust-version-check-0.9))
#:install-source? #false))
(inputs
(list maturin))
(native-inputs
(list python-wrapper))
(home-page "https://github.com/ijl/orjson")
(synopsis "Python JSON library supporting dataclasses, datetimes, and numpy")
(description "Orjson is a fast, correct JSON library for Python. It
benchmarks as the fastest Python library for JSON and is more correct than the
standard @code{json} library or other third-party libraries. It serializes
dataclass, datetime, numpy, and UUID instances natively.")
;; Either of these licenses
(license (list license:asl2.0 license:expat))))
(define-public python-argparse-addons
(package
(name "python-argparse-addons")
(version "0.7.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "argparse_addons" version))
(sha256
(base32 "1yx54dmnr3xggjcjk6bbdafvzp6cynrakl56wyz3jglmfvk0znpm"))))
(build-system python-build-system)
(home-page "https://github.com/eerimoq/argparse_addons")
(synopsis "Extensions for Python's @code{argparse} library")
(description "This Python library provides additional types and actions
for the standard @code{argparse} library.")
(license license:expat)))
(define-public python-bitstruct
(package
(name "python-bitstruct")
(version "8.14.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "bitstruct" version))
(sha256
(base32
"149c73yrqbph71bbyf925r2mbh2jdymqxc6d49lnylpiflf1j313"))))
(build-system python-build-system)
(home-page "https://github.com/eerimoq/bitstruct")
(synopsis "Python values to and C bit field structs converter")
(description "This module performs conversions between Python values and C
bit field structs represented as Python byte strings. It is intended to have
a similar interface as the @code{struct} module from Python, but working on
bits instead of primitive data types like @code{char}, @code{int}, etc.")
(license license:expat)))
(define-public python-cantools
(package
(name "python-cantools")
(version "37.0.7")
(source
(origin
;; We take the sources from the Git repository as the documentation is
;; not included with the PyPI archive.
(method git-fetch)
(uri (git-reference
(url "https://github.com/eerimoq/cantools")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"1qcf1fcwif7w70qmhxw2b8kqh420igbinq60p1chzf98xcb0ansx"))))
(build-system python-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-after 'build 'build-doc
(lambda _
;; See: https://github.com/eerimoq/cantools/issues/190.
(substitute* "README.rst"
(("https://github.com/eerimoq/cantools/raw/master\
/docs/monitor.png")
"monitor.png"))
(invoke "make" "-C" "docs" "man" "info")))
(add-after 'install 'install-doc
(lambda* (#:key outputs #:allow-other-keys)
(let* ((info (string-append #$output "/share/info"))
(man1 (string-append #$output "/share/man/man1")))
(install-file "docs/_build/texinfo/cantools.info" info)
(install-file "docs/_build/man/cantools.1" man1)))))))
(native-inputs (list python-sphinx texinfo))
(propagated-inputs
(list python-argparse-addons
python-bitstruct
python-can
python-crccheck
python-diskcache
python-matplotlib
python-parameterized
python-textparser))
(home-page "https://github.com/eerimoq/cantools")
(synopsis "Tools for the Controller Area Network (CAN) bus protocol")
(description "This package includes Controller Area Network (CAN) related
tools that can be used to:
@itemize
@item parse DBC, KCD, SYM, ARXML 4 and CDD files
@item encode and decode CAN messages
@item multiplex simple and extended signals
@item diagnose DID encoding and decoding
@item dump the CAN decoder output
@item test CAN nodes
@item generate C source code
@item monitor the CAN bus
@end itemize")
(license license:expat)))
(define-public python-capturer
(package
(name "python-capturer")
(version "2.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "capturer" version))
(sha256
(base32
"05d6ji4j8ipiq0br7bwam38qc6hd9l1djmfxlzrxx19ziyjl4089"))))
(build-system python-build-system)
(arguments
`(#:tests? #f))
(propagated-inputs
(list python-humanfriendly))
(home-page "https://capturer.readthedocs.io")
(synopsis "Capture stdout and stderr streams of the current process")
(description
"The capturer package makes it easy to capture the stdout and stderr
streams of the current process and subprocesses. Output can be relayed
to the terminal in real time but is also available to the Python program
for additional processing.")
(license license:expat)))
(define-public python-fastprogress
(package
(name "python-fastprogress")
(version "1.0.3")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/fastai/fastprogress")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"01h8f786wgmmd3fj98wk1n5id67nsp19gs8bbgims04aciwhvj21"))))
(build-system pyproject-build-system)
(arguments
(list #:tests? #f ;there are no tests
#:phases #~(modify-phases %standard-phases
;; XXX: Fails with: "In procedure utime: No such file
;; or directory".
(delete 'ensure-no-mtimes-pre-1980))))
(home-page "https://github.com/fastai/fastprogress")
(synopsis "Progress bar for Jupyter Notebook and console")
(description
"Fastprogress is a progress bar for Jupyter Notebook and console.")
(license license:asl2.0)))
(define-public python-case
(package
(name "python-case")
(version "1.5.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "case" version))
(sha256
(base32
"1cagg06vfph864s6l5jb0zqliwxh647bki8j6lf4a4qrv40jnhs8"))))
(build-system python-build-system)
(propagated-inputs
(list python-mock python-nose python-six))
(native-inputs
(list python-coverage))
(home-page "https://github.com/celery/case")
(synopsis "Unittest utilities and convenience methods")
(description
"The @code{case} package provides utilities on top of unittest, including
some helpful Python 2 compatibility convenience methods.")
(license license:bsd-3)))
(define-public python-verboselogs
(package
(name "python-verboselogs")
(version "1.7")
(source
(origin
(method url-fetch)
(uri (pypi-uri "verboselogs" version))
(sha256
(base32
"09z4d1jiasn7k1hs5af2ckmnrd0i1d1m04bhfjhv7z6svzfdwgg3"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
;; Do not run pylint plugin test, as astroid is an old
;; unsupported version.
(invoke "pytest" "-v" "-k" "not test_pylint_plugin"
"verboselogs/tests.py"))))))
(native-inputs
(list python-mock python-pytest))
(home-page "https://verboselogs.readthedocs.io")
(synopsis "Verbose logging level for Python's logging module")
(description
"The @code{verboselogs} package extends Python's @code{logging} module to
add the log levels NOTICE, SPAM, SUCCESS and VERBOSE.")
(license license:expat)))
(define-public python-coloredlogs
(package
(name "python-coloredlogs")
(version "10.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "coloredlogs" version))
(sha256
(base32
"0dkw6xp0r1dwgz4s2f58npx5nxfq51wf4l6qkm5ib27slgfs4sdq"))))
(build-system python-build-system)
(arguments
`(;Tests require some updated modules
#:tests? #f))
(propagated-inputs
(list python-capturer))
(home-page "https://coloredlogs.readthedocs.io")
(synopsis "Colored stream handler for Python's logging module")
(description
"The @code{coloredlogs} package enables colored terminal output for
Python's logging module. The @code{ColoredFormatter} class inherits from
@code{logging.Formatter} and uses ANSI escape sequences to render your logging
messages in color.")
(license license:expat)))
(define-public python-editorconfig
(package
(name "python-editorconfig")
(version "0.12.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "EditorConfig" version))
(sha256
(base32
"0v55z351p9qkyp3bbspwywwn28sbcknhirngjbj779n3z52z63hv"))))
(build-system python-build-system)
(home-page "https://editorconfig.org/")
(synopsis "EditorConfig bindings for python")
(description "The EditorConfig project consists of a file format for
defining coding styles and a collection of text editor plugins that enable
editors to read the file format and adhere to defined styles. EditorConfig
files are easily readable and they work nicely with version control systems.")
;; "fnmatch.py" and "ini.py" are licensed under psfl, the rest is bsd-2.
(license (list license:bsd-2 license:psfl))))
(define-public dosage
(package
(name "dosage")
(version "2.17")
(source
(origin
(method url-fetch)
(uri (pypi-uri "dosage" version))
(sha256
(base32
"0vmxgn9wd3j80hp4gr5iq06jrl4gryz5zgfdd2ah30d12sfcfig0"))))
(build-system python-build-system)
(propagated-inputs
(list python-cached-property
python-colorama
python-imagesize
python-importlib-metadata
python-lxml
python-requests
python-six))
(native-inputs
(list python-pytest-cov python-pytest-xdist python-responses
python-setuptools-scm))
(home-page "https://github.com/webcomics/dosage")
(synopsis "Comic strip downloader and archiver")
(description "Dosage is designed to keep a local copy of specific webcomics and other
picture-based content such as Picture of the Day sites. With the @command{dosage}
command-line script you can get the latest strip of a webcomic, catch-up to the last strip
downloaded, or download a strip for a particular date or index, if possible.")
(license license:expat)))
(define-public python-et-xmlfile
(package
(name "python-et-xmlfile")
(version "1.1")
(source
(origin
;; Use a checkout because the PyPI archive does not contain tests.
(method hg-fetch)
(uri (hg-reference
(url "https://foss.heptapod.net/openpyxl/et_xmlfile")
(changeset version)))
(file-name (string-append name "-" version "-checkout"))
(sha256
(base32 "09r8rjc5bhkqrm5c4n9jrlvad8vrvbyswl9g0wrc1qc7nzh9mpw7"))))
(build-system python-build-system)
(arguments
(list #:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv")))))))
(native-inputs
(list python-pytest python-lxml)) ;used for the tests
(home-page "https://bitbucket.org/openpyxl/et_xmlfile")
(synopsis "Low memory implementation of @code{lxml.xmlfile}")
(description "This Python library is based upon the @code{xmlfile} module
from @code{lxml}. It aims to provide a low memory, compatible implementation
of @code{xmlfile}.")
(license license:expat)))
(define-public python-omero-py
(package
(name "python-omero-py")
(version "5.13.1")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/ome/omero-py")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0n94v5dpmh873hjqd9k9ky85iab4xh37ibmi13rqpclv01ibvvxa"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
'(list "-m" "not broken" "-rf" "test" "-s"
;; TestImport tries to download Java things; TestSessions
;; and TestBuildQuery require networking.
"-k" "not TestImport and not TestSessions and not TestBuildQuery")
#:modules '((guix build pyproject-build-system)
(guix build utils)
(ice-9 match)
(srfi srfi-1)
(srfi srfi-26))
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'find-artifacts
(lambda* (#:key inputs #:allow-other-keys)
(let ((zip-file
(match inputs
(((labels . files) ...)
(find (cut string-suffix? "omero-blitz-5.5.5-python.zip" <>)
files)))))
(setenv "ZIP_FILE"
(or zip-file (error "failed to find artifact file"))))))
;; Some tests need this, such as TestTempFileManager
(add-after 'build 'set-HOME
(lambda _ (setenv "HOME" "/tmp")))
;; The sanity check mistakes omero_model_TypeAnnotationI.py for a
;; module to load.
(delete 'sanity-check)
;; The argument parser is picky and interprets the "-real" part as
;; the first argument.
(add-after 'wrap 'rename-executable
(lambda _
(with-directory-excursion (string-append #$output "/bin")
(rename-file ".omero-real" ".omero")
(substitute* "omero"
(("bin/.omero-real") "bin/.omero"))))))))
(propagated-inputs
(list python-appdirs
python-future
python-numpy
python-pillow
python-pyyaml
python-requests
python-tables
python-zeroc-ice-3.6))
(native-inputs
(list python-mox3
python-pytest
python-pytest-rerunfailures
python-pytest-xdist
unzip
(origin
(method url-fetch)
(uri "https://artifacts.openmicroscopy.org/artifactory/\
ome.releases/org/openmicroscopy/omero-blitz/5.5.5/omero-blitz-5.5.5-python.zip")
(sha256
(base32 "0wyja1zv19c1r3m31gsp555jzj3cg2v2pl00zlybpw3qd36yffwc")))))
(home-page "https://github.com/ome/omero-py")
(synopsis "Python bindings to the OMERO.blitz server")
(description "This package provides Python bindings to the OMERO.blitz
server.")
(license license:gpl2)))
(define-public python-openpyxl
(package
(name "python-openpyxl")
(version "3.0.10")
(source
(origin
;; We use the upstream repository, as the tests are not included in the
;; PyPI releases.
(method hg-fetch)
(uri (hg-reference
(url "https://foss.heptapod.net/openpyxl/openpyxl")
(changeset version)))
(file-name (string-append name "-" version "-checkout"))
(sha256
(base32 "0f8ym32vdn8wyziiy5bz8iiwvgj7dlccy86wkfcn5syqgivgqnv9"))))
(build-system pyproject-build-system)
(native-inputs (list python-lxml python-pillow python-pytest))
(propagated-inputs (list python-et-xmlfile python-jdcal))
(home-page "https://openpyxl.readthedocs.io")
(synopsis "Python library to read/write Excel 2010 XLSX/XLSM files")
(description
"This Python library allows reading and writing to the Excel XLSX, XLSM,
XLTX and XLTM file formats that are defined by the Office Open XML (OOXML)
standard.")
(license license:expat)))
(define-public python-eventlet
(package
(name "python-eventlet")
(version "0.33.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "eventlet" version))
(sha256
(base32
"1nngffz21afhfi266smf4s5mn5dfd0ykdnirfls9bwnzxbkh6a3j"))))
(build-system python-build-system)
(propagated-inputs
(list python-dnspython python-greenlet python-six))
(native-inputs
(list python-nose))
(arguments
'(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'avoid-OSError
(lambda _
;; If eventlet tries to load greendns, an OSError is thrown when
;; getprotobyname is called. Thankfully there is an environment
;; variable to disable the greendns import, so use it:
(setenv "EVENTLET_NO_GREENDNS" "yes")))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke
"nosetests"
"-v" "tests/"
"-I" "greendns_test.py"
"-I" "socket_test.py"
"-e" "test_018b_http_10_keepalive_framing"
;; The following two tests fail with Python 3.10. See
;; <https://github.com/eventlet/eventlet/issues/730>.
"-e" "test_patcher_existing_locks_locked"
;; And see <https://github.com/eventlet/eventlet/issues/739>.
"-e" "test_017_ssl_zeroreturnerror"
;; This test is failing on some architectures
"-e" "test_fork_after_monkey_patch")))))))
(home-page "https://eventlet.net")
(synopsis "Concurrent networking library for Python")
(description
"Eventlet is a concurrent networking library for Python that
allows you to change how you run your code, not how you write it.
It uses @code{epoll} or @code{libevent} for highly scalable non-blocking I/O.
Coroutines ensure that the developer uses a blocking style of programming
that is similar to threading, but provide the benefits of non-blocking I/O.
The event dispatch is implicit, which means you can easily use @code{Eventlet}
from the Python interpreter, or as a small part of a larger application.")
(license license:expat)))
(define-public python-sinfo
(package
(name "python-sinfo")
(version "0.3.4")
(source (origin
(method url-fetch)
(uri (pypi-uri "sinfo" version))
(sha256
(base32
"0kdsp883mx0lfyykv0p12bvs203kdm3skb8bw5wf2pc7kb393sl1"))))
(build-system python-build-system)
(propagated-inputs
(list python-stdlib-list))
(home-page "https://gitlab.com/joelostblom/session_info")
(synopsis "Output module version information loaded in a Python session")
(description "This package outputs version information for modules loaded
in the current session, Python, and the OS.")
(license license:bsd-3)))
(define-public python-six
(package/inherit python-six-bootstrap
(name "python-six")
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "pytest" "-v"))))))
(native-inputs
`(("python-pytest" ,python-pytest-bootstrap)))))
(define-public python2-six
(let ((base (package-with-python2 python-six)))
(package
(inherit base)
;; Reduce Python 2 closure by disabling tests and removing the native
;; inputs.
(arguments (substitute-keyword-arguments (package-arguments base)
((#:phases phases)
`(modify-phases ,phases
(delete 'check)))))
(native-inputs '()))))
(define-public python-schedule
(package
(name "python-schedule")
(version "0.4.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "schedule" version))
(sha256
(base32
"0vplyjcbfrq50sphlwya749z8p2pcyi2nycw3518i0qpd9a6189i"))
(snippet
#~(begin (use-modules (guix build utils))
(substitute* "schedule/__init__.py"
(("collections\\.Hashable")
"collections.abc.Hashable"))))))
(build-system python-build-system)
(native-inputs
(list python-pytest python-mock))
(home-page "https://github.com/dbader/schedule")
(synopsis "Schedule periodic function calls in Python")
(description
"Schedule is an in-process scheduler for periodic jobs that uses the
builder pattern for configuration. Schedule lets you run Python functions (or
any other callable) periodically at pre-determined intervals using a simple,
human-friendly syntax.")
(license license:expat)))
(define-public python-scour
(package
(name "python-scour")
(version "0.38.2")
(source
(origin
(method git-fetch)
(uri
(git-reference
(url "https://github.com/scour-project/scour")
(commit
(string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0mmfvx4wqp8gkpv0kbih89zfs9njvmd3v4dxfqii62xddpxq0f1k"))))
(propagated-inputs
(list python-six))
(build-system python-build-system)
(home-page "https://github.com/scour-project/scour")
(synopsis "Scour is an SVG optimizer/cleaner written in Python")
(description "The goal of Scour is to output a file that renders
identically at a fraction of the size by removing a lot of redundant
information created by most SVG editors. Optimization options are typically
lossless but can be tweaked for more aggressive cleaning.")
(license license:asl2.0)))
(define-public python-mechanize
(package
(name "python-mechanize")
(version "0.4.7")
(source
(origin
(method url-fetch)
(uri (pypi-uri "mechanize" version))
(sha256
(base32
"02b845y85ka5sl2cj93lll3v326d8bww07bq1q0y1643h7sshwqp"))))
(build-system python-build-system)
(propagated-inputs
(list python-html5lib))
(home-page "https://github.com/python-mechanize/mechanize")
(synopsis
"Stateful programmatic web browsing in Python")
(description
"Mechanize implements stateful programmatic web browsing in Python,
after Andy Lester’s Perl module WWW::Mechanize.")
(license license:bsd-3)))
(define-public python-mediapy
(package
(name "python-mediapy")
(version "1.2.0")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/google/mediapy")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "14hmwib0dmy9h1w7allwsp0cgrfdv8f2sm9qlvy65yxai68v6vnl"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
'(modify-phases %standard-phases
(add-after 'unpack 'fix-references
(lambda _
(substitute* "mediapy_test.py"
(("'/bin/bash")
(string-append "'" (which "bash")))))))))
(inputs (list ffmpeg-5))
(propagated-inputs (list python-absl-py
python-ipython
python-matplotlib
python-numpy
python-pillow))
(native-inputs
(list python-flit-core
python-pylint
python-pytest
python-pytest-xdist))
(home-page "https://github.com/google/mediapy")
(synopsis "Read/write/show images and videos in an IPython notebook")
(description "This Python library makes it easy to display images and
videos in a notebook.")
(license license:asl2.0)))
(define-public python-simpleaudio
(package
(name "python-simpleaudio")
(version "1.0.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "simpleaudio" version))
(sha256
(base32
"07glihg0fpca0gvbbvqs9q815w8xhflzdvg72yvlsm23j9j8h739"))))
(build-system python-build-system)
(arguments
`(#:tests? #f))
(inputs
(list alsa-lib))
(home-page
"https://github.com/hamiltron/py-simple-audio")
(synopsis "Simple, asynchronous audio playback for Python 3")
(description
"The @code{simplaudio} package provides cross-platform, dependency-free
audio playback capability for Python 3 on OSX, Windows, and Linux.")
(license license:expat))) ; MIT license
(define-public python-wavefile
(package
(name "python-wavefile")
(version "1.6.2")
(source (origin
(method url-fetch)
(uri (pypi-uri "wavefile" version))
(sha256
(base32
"04mdcxq7n1vnwb9y65j0cwpy91ik5rh9vki1f45xqnh4ygz91n75"))))
(build-system python-build-system)
(arguments
(list #:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'patch-libsndfile-path
(lambda* (#:key inputs #:allow-other-keys)
(substitute* "wavefile/libsndfile.py"
(("'libsndfile")
(string-append "'" (assoc-ref inputs "libsndfile")
"/lib/libsndfile"))))))))
(inputs
(list libsndfile portaudio))
(propagated-inputs (list python-numpy python-pyaudio))
(home-page "https://github.com/vokimon/python-wavefile")
(synopsis "Pythonic audio file reader and writer")
(description
"This package provides pythonic libsndfile wrapper to read and write audio
files.")
(license license:gpl3+)))
(define-public python-jsonalias
(package
(name "python-jsonalias")
(version "0.1.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "jsonalias" version))
(sha256
(base32
"0sd7c3vyvfhhpnan77ax4f0x1whjcb5iz7jhjky7kmcpaf9lvw34"))))
(build-system python-build-system)
(arguments (list #:tests? #f)) ; There are no tests.
(home-page "https://github.com/kevinheavey/jsonalias/")
(synopsis "JSON type alias for Python")
(description
"This package provides a microlibrary that defines a JSON type alias for
Python.")
(license license:expat)))
(define-public python-jsonargparse
(package
(name "python-jsonargparse")
(version "4.21.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "jsonargparse" version))
(sha256
(base32
"1k3b60x0zf86fh50y2jyby30gksqriyvvpfnf5mqq0qn7jih01y7"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
'(list "-k" (string-append "not test_env_prefix"
" and not test_basemodel"
" and not test_field_default_factory"
" and not test_field_description"
" and not test_get_param_relative_import_from_init"
;; Strangely, the arguments are interpreted
;; as arguments to pytest.
" and not test_pydantic_types"))))
(propagated-inputs
(list python-contextvars
python-dataclasses
python-docstring-parser
python-pyyaml
python-typeshed-client))
(native-inputs
(list python-attrs
python-coverage
python-pre-commit
python-pycodestyle
python-pydantic
python-pytest
python-pytest-subtests
python-responses
python-tox
python-types-requests))
(home-page "https://github.com/omni-us/jsonargparse/")
(synopsis "Implement minimal boilerplate CLIs derived from type hints")
(description
"This package lets you implement minimal boilerplate CLIs derived from
type hints and parse from command line, config files and environment
variables.")
(license license:expat)))
(define-public python-pymarshal
(package
(name "python-pymarshal")
(version "2.2.3")
(source (origin
(method url-fetch)
(uri (pypi-uri "pymarshal" version))
(sha256
(base32
"1lhb7yim60pvclbd440zd4n50xs1d2rvmnrhhvib3hyv0dxil5j3"))))
(build-system pyproject-build-system)
(arguments
;; Test fails with this error:
;; "CovReportWarning: Failed to generate report: No data to report."
(list #:tests? #f))
(native-inputs
(list python-pytest python-pytest-cov))
(propagated-inputs (list python-bson python-pyyaml))
(home-page "https://gitlab.com/d3v-t00lz/pymarshal")
(synopsis "Pythonic implementation of Golang struct (un)marshalling")
(description "PyMarshal replicates the feature of (un)marshalling structs
in Golang.")
(license license:bsd-2)))
(define-public python-simplejson
(package
(name "python-simplejson")
(version "3.17.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "simplejson" version))
(sha256
(base32
"19pqqn01y6qmhhv8q6dh4p1acav49kl923kklnns2qxz5a6h766g"))))
(build-system python-build-system)
(native-inputs
(list python-toml))
(home-page "https://simplejson.readthedocs.io/en/latest")
(synopsis
"Json library for Python")
(description
"JSON (JavaScript Object Notation) is a subset of JavaScript
syntax (ECMA-262 3rd edition) used as a lightweight data interchange
format.
Simplejson exposes an API familiar to users of the standard library marshal
and pickle modules. It is the externally maintained version of the json
library contained in Python 2.6, but maintains compatibility with Python 2.5
and (currently) has significant performance advantages, even without using
the optional C extension for speedups. Simplejson is also supported on
Python 3.3+.")
(license license:x11)))
(define-public python-simple-rlp
(package
(name "python-simple-rlp")
(version "0.1.3")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/SamuelHaidu/simple-rlp")
;; Upstream doesn't tag the git repo.
(commit "342ea269d84da1ddc4a7630cdebc90159261391c")))
(file-name (git-file-name name version))
(sha256
(base32
"1nv92sphpkyrncak4qgj50qmgkmj4ycl2szbnv9c7ihgl5df4div"))))
(build-system python-build-system)
(home-page "https://github.com/SamuelHaidu/simple-rlp")
(synopsis
"Python implementation of RLP (Recursive Length Prefix) encoding")
(description
"@code{simple-rlp} is a python implementation of RLP (Recursive Length \
Prefix) - Encode and decode data structures.")
(license license:expat)))
(define-public python-pyicu
(package
(name "python-pyicu")
(version "2.9")
(source
(origin
(method url-fetch)
(uri (pypi-uri "PyICU" version))
(sha256
(base32
"0y2qhh443vydi3y7kmhyb6kz3z6d7qq7ld0sg88mfqalcp7dca9w"))))
(build-system python-build-system)
(inputs
(list icu4c))
(native-inputs
(list python-pytest python-six))
(home-page "https://gitlab.pyicu.org/main/pyicu")
(synopsis "Python extension wrapping the ICU C++ API")
(description
"PyICU is a python extension wrapping the ICU C++ API.")
(license license:x11)))
(define-public python-dogtail
(package
(name "python-dogtail")
(version "0.9.11")
(source (origin
(method url-fetch)
(uri
(string-append
"https://gitlab.com/dogtail/dogtail/-/raw/released/"
"dogtail-" version ".tar.gz"))
(sha256
(base32
"0sr38z7b2n12bvfd4xw4b5dnnhkn5zl3h0ymmnnzavcihfqia6l0"))))
(build-system python-build-system)
(arguments
`(#:tests? #f ; TODO Launching dbus for the tests
; fails
#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(system "Xvfb :1 &")
(setenv "DISPLAY" ":1")
(invoke "dbus-run-session" "--" "nosetests" "-v" "tests/"))
#t)))))
(propagated-inputs
(list python-pygobject python-pycairo python-pyatspi))
(native-inputs
(list python-nose
gtk+
xorg-server-for-tests
dbus
gsettings-desktop-schemas
gobject-introspection))
(home-page "https://gitlab.com/dogtail/dogtail/")
(synopsis "GUI test tool and automation framework written in Python")
(description
"Dogtail is a GUI test tool and automation framework written in Python.
It uses Accessibility (a11y) technologies to communicate with desktop
applications. dogtail scripts are written in Python and executed like any
other Python program.")
(license license:gpl2+)))
(define-public python-doxyqml
(package
(name "python-doxyqml")
(version "0.5.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "doxyqml" version))
(sha256
(base32
"1f0jjqvamly4hn7f1palvq27z6yr694rfzyxrb6g0ysbbawxkvq9"))))
(build-system python-build-system)
(home-page "https://agateau.com/projects/doxyqml")
(synopsis "Doxygen input filter for QML files")
(description
"This package provides a Doxygen input filter for QML files.")
(license license:bsd-3)))
(define-public python-doxypypy
(package
(name "python-doxypypy")
(version "0.8.8.6")
(source (origin
(method url-fetch)
(uri (pypi-uri "doxypypy" version))
(sha256
(base32
"06z0vbh975g42z5szbfvn9i3bif3xwr5pncqd4fvjzjkbi2p2xb2"))))
(build-system python-build-system)
(arguments '(#:tests? #f)) ;no test suite
(home-page "https://github.com/Feneric/doxypypy")
(synopsis "Doxygen filter for Python")
(description
"This package provides a Doxygen filter for Python.")
(license license:gpl2+)))
(define-public python-empy
(package
(name "python-empy")
(version "3.3.3")
(source (origin
(method url-fetch)
(uri (string-append "http://www.alcyone.com/software/empy/empy-"
version ".tar.gz"))
(sha256
(base32
"1mxfy5mgp473ga1pgz2nvm8ds6z4g3hdky8523z6jzvcs9ny6hcq"))))
(build-system python-build-system)
(arguments
`(#:tests? #f)) ; python2 only
(home-page "http://www.alcyone.com/software/empy/")
(synopsis "Templating system for Python")
(description
"EmPy is a system for embedding Python expressions and statements in
template text; it takes an EmPy source file, processes it, and produces
output. This is accomplished via expansions, which are special signals to the
EmPy system and are set off by a special prefix (by default the at sign, @@).
EmPy can expand arbitrary Python expressions and statements in this way, as
well as a variety of special forms. Textual data not explicitly delimited in
this way is sent unaffected to the output, allowing Python to be used in
effect as a markup language. Also supported are callbacks via hooks,
recording and playback via diversions, and dynamic, chainable filters. The
system is highly configurable via command line options and embedded
commands.")
(license license:lgpl2.1+)))
(define-public python-palettable
(package
(name "python-palettable")
(version "3.3.3")
(source (origin
(method url-fetch)
(uri (pypi-uri "palettable" version))
(sha256
(base32
"1a4h0jpsr3wjciqg9a5kslxv65d3qqgmqgkpai4cl77wlpcxfk89"))))
(build-system pyproject-build-system)
(native-inputs (list python-pytest))
(home-page "https://jiffyclub.github.io/palettable/")
(synopsis "Color palettes for Python")
(description "Palettable (formerly brewer2mpl) is a library of color
palettes for Python. It’s written in pure Python with no dependencies, but it
can supply color maps for matplotlib. You can use Palettable to customize
matplotlib plots or supply colors for a web application.")
(license license:expat)))
(define-public python-parse-type
(package
(name "python-parse-type")
(version "0.6.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "parse_type" version))
(sha256
(base32
"07smqnzc9km7sbvxfyx4gdm9njrx58x8grdw6gs4gva81rk3rd10"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv" "-c" "/dev/null")))))))
(propagated-inputs (list python-six python-parse))
(native-inputs (list python-pytest))
(home-page "https://github.com/jenisys/parse_type")
(synopsis "Extended parse module")
(description "Parse_type extends the python parse module.")
(license license:bsd-3)))
(define-public python-parse
(package
(name "python-parse")
(version "1.18.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "parse" version))
(sha256
(base32
"19063x4xdjpaf7rfxai6jpgm2k4yvkq7wha8aa8cagbjsqr60rli"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _ (invoke "python" "test_parse.py"))))))
(home-page "https://github.com/r1chardj0n3s/parse")
(synopsis "Parse strings")
(description
"Parse strings using a specification based on the Python @code{format()}
syntax.")
(license license:x11)))
(define-public python-parsley
(package
(name "python-parsley")
(version "1.3")
(source (origin
;; The source distributed on PyPI is outdated.
(method git-fetch)
(uri (git-reference
(url "https://github.com/pyga/parsley")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"0550rw65ygqzbjc8a66hs355pzbx727kbn20dssdb6ls846gw2qs"))))
(build-system pyproject-build-system)
(arguments
(list
;; XXX: Check why these 3 tests fail.
#:test-flags #~(list "-k"
(string-append "not test_sending_empty_netstring"
" and not test_sending_one_netstring"
" and not test_sending_two_netstrings"))))
(native-inputs (list python-pytest python-twisted))
(home-page "https://launchpad.net/parsley")
(synopsis "Parsing and pattern matching Python library")
(description
"Parsley is a parsing library using PEG algorithm, so each expression in
the grammar rules works like a Python expression. In particular, alternatives
are evaluated in order, unlike table-driven parsers such as yacc, bison or PLY.
Parsley is an implementation of OMeta, an object-oriented pattern-matching
language.")
(license license:expat)))
(define-public python-polib
(package
(name "python-polib")
(version "1.1.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "polib" version))
(sha256
(base32
"0aikb8gcarhifn3sadrbbs5czagih9hjv250gsrgy9v1d49pvn7s"))))
(build-system python-build-system)
(home-page "https://bitbucket.org/izi/polib/wiki/Home")
(synopsis "Manipulate, create and modify gettext files")
(description "Polib can manipulate any gettext format (po, pot and mo)
files. It can be used to create po files from scratch or to modify
existing ones.")
(license license:expat)))
(define-public python-polling2
(package
(name "python-polling2")
(version "0.5.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "polling2" version))
(sha256
(base32 "0hp3238fv6k1qk43gv4jwnv1mwlkmx33akbj560b9nvsry1dmdwh"))))
(build-system python-build-system)
(arguments '(#:tests? #false)) ; no tests included
(native-inputs
(list python-mock python-pytest python-pytest-runner))
(home-page "https://github.com/ddmee/polling2")
(synopsis "Polling utility with many configurable options")
(description "Polling2 is a utility used to wait for a function to return
a certain expected condition.")
(license license:expat)))
(define-public python-pomegranate
(package
(name "python-pomegranate")
(version "0.14.8")
(source (origin
(method url-fetch)
(uri (pypi-uri "pomegranate" version))
(sha256
(base32
"0gb9srkbxzlkjyfizvxkw5y0bvnfcyiaxapz0hrdaba8j096b5i2"))
(modules '((guix build utils)))
;; Delete generated Cython C files.
(snippet
'(for-each delete-file (find-files "." "\\.c$")))))
(build-system python-build-system)
(arguments
(list
#:phases
'(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "python" "setup.py" "test")))))))
(propagated-inputs
(list python-joblib
python-networkx
python-numpy
python-pyyaml
python-scipy))
(native-inputs
(list python-cython
python-nose
python-pandas))
(home-page "https://pypi.python.org/pypi/pomegranate/")
(synopsis "Graphical models library for Python")
(description
"Pomegranate is a graphical models library for Python, implemented in
Cython for speed.")
(license license:expat)))
(define-public python-daft
(package
(name "python-daft")
(version "0.1.2")
(source (origin
(method url-fetch)
(uri (pypi-uri "daft" version))
(sha256
(base32
"1r8jsfavd624q2q61f863lk6has6mv5csswh39saafd5khwf0xry"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
'(list "-k"
(string-append
;; The following tests compare matplotlib output with
;; previously generated images. They fail due to minor
;; differences in where matplotlib places labels.
"not test_bca[png]"
" and not test_classic[png]"
" and not test_deconvolution[png]"
" and not test_exoplanets[png]"
" and not test_fixed[png]"
" and not test_gaia[png]"
" and not test_galex[png]"
" and not test_huey_p_newton[png]"
" and not test_logo[png]"
" and not test_no_circles[png]"
" and not test_no_gray[png]"
" and not test_recursive[png]"
" and not test_thick_lines[png]"
" and not test_weaklensing[png]"
" and not test_wordy[png]"))))
(propagated-inputs (list python-matplotlib python-numpy))
(native-inputs (list python-pytest))
(home-page "https://docs.daft-pgm.org/")
(synopsis "PGM rendering library")
(description "Daft is a Python package that uses matplotlib to
render pixel-perfect probabilistic graphical models for publication in
a journal or on the internet. With a short Python script and an
intuitive model-building syntax you can design directed (Bayesian
Networks, directed acyclic graphs) and undirected (Markov random fields)
models and save them in any formats that matplotlib supports (including
PDF, PNG, EPS and SVG).")
(license license:expat)))
(define-public python-portalocker
(package
(name "python-portalocker")
(version "2.7.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "portalocker" version))
(sha256
(base32
"0lawjm736vs86wlnxc3qqh37l11z0yx81xq3dmrw33m86kaq2bh3"))))
(build-system pyproject-build-system)
(native-inputs (list python-pytest
python-pytest-cov
python-pytest-mypy
python-pytest-timeout
python-redis))
(home-page "https://github.com/WoLpH/portalocker")
(synopsis "Python library for file locking")
(description "Portalocker is a library to provide an easy API to file
locking..")
(license license:bsd-3)))
(define-public python-poyo
(package
(name "python-poyo")
(version "0.5.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "poyo" version))
(sha256
(base32
"1pflivs6j22frz0v3dqxnvc8yb8fb52g11lqr88z0i8cg2m5csg2"))))
(build-system python-build-system)
(home-page "https://github.com/hackebrot/poyo")
(synopsis "Lightweight YAML Parser for Python")
(description
"This package provides a lightweight YAML Parser for Python. It supports
only a chosen subset of the YAML format that is required to parse cookiecutter
user configuration files. It does not have support for serializing into YAML
and is not compatible with JSON.")
(license license:expat)))
(define-public python-exceptiongroup
(package
(name "python-exceptiongroup")
(version "1.1.1")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/agronholm/exceptiongroup")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"0wcvzwgjs0xmggs6dh92jxdqi988gafzh10hrzvw10kasy0xakfj"))))
(build-system python-build-system)
(arguments
(list
#:tests? #f ;TODO: Circular dependency on pytest
#:phases
#~(modify-phases %standard-phases
;; XXX: PEP 517 manual build/install procedures copied from
;; python-isort.
(replace 'build
(lambda _
(setenv "SETUPTOOLS_SCM_PRETEND_VERSION" #$version)
;; ZIP does not support timestamps before 1980.
(setenv "SOURCE_DATE_EPOCH" "315532800")
(invoke "python" "-m" "build" "--wheel" "--no-isolation" ".")))
(replace 'install
(lambda* (#:key outputs #:allow-other-keys)
(let ((whl (car (find-files "dist" "\\.whl$"))))
(invoke "pip" "--no-cache-dir" "--no-input"
"install" "--no-deps" "--prefix" #$output whl))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv" "tests")))))))
(native-inputs (list python-flit-scm python-pypa-build))
(home-page "https://github.com/agronholm/exceptiongroup")
(synopsis "PEP 654 backport from Python 3.11")
(description "This is a backport of the @code{BaseExceptionGroup} and
@code{ExceptionGroup} classes from Python 3.11.")
(license license:expat)))
(define-public python-extension-helpers
(package
(name "python-extension-helpers")
(version "1.1.1")
(source
(origin
(method git-fetch) ; no tests in the PyPI tarball
(uri (git-reference
(url "https://github.com/astropy/extension-helpers")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1lkhypg21ydx03z03dppbf05zff40dyl0kn6nichzfdfpqnr5055"))))
(build-system pyproject-build-system)
(arguments
(list
;; It tries to install it via pip: E ModuleNotFoundError: No module named
;; 'helpers_test_package_fd9cc3a9_11fa_4a1a_b80e_c5b043949604'
#:test-flags #~(list "-k" "not test_only_pyproject[True]")
#:phases
#~(modify-phases %standard-phases
;; LookupError: setuptools-scm was unable to detect version for
;; /tmp/guix-build-python-extension-helpers-1.1.1.drv-0/source.
(add-before 'build 'set-version
(lambda _
(setenv "SETUPTOOLS_SCM_PRETEND_VERSION" #$version)))
(replace 'check
(lambda* (#:key tests? test-flags #:allow-other-keys)
(when tests?
(setenv "HOME" "/tmp")
(with-directory-excursion "/tmp"
(apply invoke "pytest" "-v" test-flags))))))))
(native-inputs
(list python-pytest
python-pytest-astropy
python-pytest-cov
python-setuptools-scm
python-tomli))
(home-page "https://extension-helpers.readthedocs.io")
(synopsis "Astropy ecosystem utilities for building and installing packages")
(description
"The extension-helpers package includes convenience helpers to assist with
building Python packages with compiled C/Cython extensions. It is developed by
the Astropy project but is intended to be general and usable by any Python
package.")
(license license:bsd-3)))
(define-public python-extras
(package
(name "python-extras")
(version "1.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "extras" version))
(sha256
(base32
"0khvm08rcwm62wc47j8niyl6h13f8w51c8669ifivjdr23g3cbhk"))))
(build-system python-build-system)
(arguments
;; FIXME: Circular dependency on testtools.
'(#:tests? #f))
(home-page "https://github.com/testing-cabal/extras")
(synopsis "Useful extensions to the Python standard library")
(description
"Extras is a set of extensions to the Python standard library.")
(license license:expat)))
(define-public python-milc
(package
(name "python-milc")
(version "1.6.8")
(source (origin
(method url-fetch)
(uri (pypi-uri "milc" version))
(sha256
(base32
"1pnwdg2653lc82qsv6c0kv9qcydh2f6w5mx5l4227zy1f6kr7b52"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-appdirs python-argcomplete python-colorama
python-halo python-spinners))
(home-page "https://github.com/clueboard/milc")
(synopsis "Python library for command line interface programs")
(description "MILC is a Python library for developing command line
interface programs. This library provides features to parse arguments,
automatic tab-completion, color support, logging to @code{std}, etc.")
(license license:expat)))
(define-public python-mimeparse
(package
(name "python-mimeparse")
(version "1.6.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "python-mimeparse" version))
(sha256
(base32
"0y2g6cl660bpz11srgqyvvm8gmywpgyx8g0xfvbiyr0af0yv1r3n"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "./mimeparse_test.py"))))))
(home-page
"https://github.com/dbtsai/python-mimeparse")
(synopsis "Python library for parsing MIME types")
(description
"Mimeparse provides basic functions for parsing MIME type names and
matching them against a list of media-ranges.")
(license license:expat)))
(define-public python-miniboa
(package
(name "python-miniboa")
(version "1.0.8")
(source
(origin
(method url-fetch)
(uri (pypi-uri "miniboa" version))
(sha256
(base32
"002c1aki9hsrwj5plrwdrf3sk8rn95fqylqyjx2arrjfpsih4dgs"))))
(build-system python-build-system)
(home-page "https://github.com/shmup/miniboa")
(synopsis "Simple, single-threaded Telnet server")
(description
"Miniboa is a simple, asynchronous, single-threaded, poll-based Telnet
server.")
(license license:asl2.0)))
(define-public python-mir-eval
(package
(name "python-mir-eval")
(version "0.7")
(source (origin
(method url-fetch)
(uri (pypi-uri "mir_eval" version))
(sha256
(base32
"0pp6xdflqhj2czhb2w3kk2c7mx4h2hj0n5rabiaafrbcfsjvmzp1"))))
(build-system python-build-system)
(propagated-inputs (list python-future python-numpy python-scipy
python-six))
(native-inputs (list python-matplotlib))
(home-page "https://github.com/craffel/mir_eval")
(synopsis "Common metrics for common audio/music processing tasks.")
(description "This is a Python library for computing common heuristic
accuracy scores for various music/audio information retrieval/signal
processing tasks.")
(license license:expat)))
(define-public python-mizani
(package
(name "python-mizani")
(version "0.9.2")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/has2k1/mizani")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"13aisfc98nvypb4mglpdphp2r627cjzpdriw4dhlx55f3b2m0dza"))))
(build-system pyproject-build-system)
(propagated-inputs
(list python-matplotlib python-numpy python-pandas python-scipy))
(native-inputs
(list python-setuptools python-setuptools-scm
python-pytest python-pytest-cov tzdata))
(home-page "https://github.com/has2k1/mizani")
(synopsis "Create data visualizations in Python")
(description
"Mizani is a Python package for creating data visualizations. It
provides functions and tools to help with the creation of visually appealing
and informative visualizations, including scales, transformations and color
palettes.")
(license license:bsd-3)))
(define-public python-pafy
(package
(name "python-pafy")
(version "0.5.3.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pafy" version))
(sha256
(base32
"1a7dxi95m1043rxx1r5x3ngb66nwlq6aqcasyqqjzmmmjps4zrim"))))
(build-system python-build-system)
(arguments
`(#:tests? #f)) ; Currently pafy can not find itself in the tests
(propagated-inputs
;; Youtube-dl is a python package which is imported in the file
;; "backend_youtube_dl.py", therefore it needs to be propagated.
(list youtube-dl))
(home-page "https://np1.github.io/pafy/")
(synopsis "Retrieve YouTube content and metadata")
(description
"@code{pafy} is a python library to retrieve YouTube content and metadata.")
(license license:lgpl3+)))
(define-public python-miniupnpc
(package
(name "python-miniupnpc")
(version "2.2.3")
(source
(origin
(method git-fetch)
(uri
(git-reference
(url "https://github.com/miniupnp/miniupnp")
(commit
(string-append
"miniupnpc_" (string-replace-substring version "." "_")))))
(file-name
(git-file-name name version))
(sha256
(base32 "03q1rlzvfzm15g1bfw2zqzavlsyaypnaf2k3cz6ha7k5rirkdy0l"))))
(build-system python-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'subdir
(lambda* (#:key inputs #:allow-other-keys)
(chdir "miniupnpc")
(setenv "CC" #$(cc-for-target))
(substitute* "Makefile"
(("/bin/sh") (search-input-file inputs "/bin/sh")))))
(add-before 'subdir 'remove-kernel-version
;; Avoid embedding the running kernel version for reproducible builds
(lambda _
(substitute*
"miniupnpc/updateminiupnpcstrings.sh"
(("^OS_VERSION=`uname -r`") "OS_VERSION=Guix")))))))
(inputs (list python)) ;we are building a Python extension
(synopsis "UPnP client for Python")
(description "Miniupnpc is a client library for Python programs to set up
port forwards using @acronym{UPnP, Universal Plug and Play}.")
(home-page "http://miniupnp.free.fr")
(license license:bsd-3)))
(define-public python-py
(package
(name "python-py")
(version "1.11.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "py" version))
(sha256
(base32
"06c7m7sfcn7587xd4s2bng8m6q1gsfd3j93afhplfjq74r0mrisi"))))
(build-system python-build-system)
(arguments
;; FIXME: "ImportError: 'test' module incorrectly imported from
;; '/gnu/store/...-python-pytest-mimimal-3.0.5/lib/python3.5/site-packages'.
;; Expected '/tmp/guix-build-python-py-1.4.31.drv-0/py-1.4.31/py'.
;; Is this module globally installed?"
'(#:tests? #f))
(native-inputs
(list python-setuptools-scm))
(home-page "https://github.com/pytest-dev/py")
(synopsis "Python library for parsing, I/O, instrospection, and logging")
(description
"Py is a Python library for file name parsing, .ini file parsing, I/O,
code introspection, and logging.")
(license license:expat)))
;; Recent versions of python-fixtures and python-testrepository need
;; python-pbr for packaging, which itself needs these two packages for
;; testing.
;; To fix this circular dependency, we use a build of python-pbr, based on the
;; same source, just without any test dependencies and with tests disabled.
;; python-pbr-minmal is then used to package python-fixtures and
;; python-testrepository.
;; Strictly speaking we currently could remove the test-requirements from the
;; normal python-pbr package (and save this package) since test are disabled
;; there anyway. But this may change in future.
(define-public python-pbr-minimal
(package
(name "python-pbr-minimal")
(version "5.5.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pbr" version))
(sha256
(base32
"1j8k5d4rdhy5bw5ai1vkjzln2albah94in3vvyvxa0n42fv81baz"))))
(build-system python-build-system)
(arguments
`(#:tests? #f))
(home-page "https://docs.openstack.org/pbr/latest/")
(synopsis "Minimal build of python-pbr used for bootstrapping")
(description
"Used only for bootstrapping python2-pbr, you should not need this.")
(license license:asl2.0)))
(define-public python-pbr
(package
(inherit python-pbr-minimal)
(name "python-pbr")
(arguments
`(#:tests? #f)) ;; Most tests seem to use the Internet.
(propagated-inputs
(list git)) ;; pbr actually uses the "git" binary.
(native-inputs
`(("python-fixtures" ,python-fixtures-bootstrap)
;; discover, coverage, hacking, subunit
("python-mock" ,python-mock)
("python-six" ,python-six)
("python-sphinx" ,python-sphinx)
("python-testrepository" ,python-testrepository-bootstrap)
("python-testresources" ,python-testresources-bootstrap)
("python-testscenarios" ,python-testscenarios-bootstrap)
("python-testtools" ,python-testtools-bootstrap)
("python-virtualenv" ,python-virtualenv)))
(synopsis "Enhance the default behavior of Python’s setuptools")
(description
"Python Build Reasonableness (PBR) is a library that injects some useful
and sensible default behaviors into your setuptools run. It will set
versions, process requirements files and generate AUTHORS and ChangeLog file
from git information.
")))
(define-public python-pyrsistent
(package
(name "python-pyrsistent")
(version "0.16.0")
(home-page "https://github.com/tobgu/pyrsistent")
(source (origin
(method url-fetch)
(uri (pypi-uri "pyrsistent" version))
(sha256
(base32
"1lrsjgblnapfimd0alsi1as5nz2lfqv97131l7d6anbjzq2rjri8"))))
(build-system python-build-system)
(arguments
'(#:phases (modify-phases %standard-phases
;; The package works fine with newer Pytest and Hypothesis, but
;; has pinned older versions to stay compatible with Python 2.
(add-before 'check 'loosen-pytest-requirement
(lambda _
(substitute* "setup.py"
(("pytest<5") "pytest")
(("hypothesis<5") "hypothesis"))
#t)))))
(native-inputs
(list python-hypothesis python-pytest python-pytest-runner))
(propagated-inputs
(list python-six))
(synopsis "Persistent data structures for Python")
(description
"Pyrsistent is a number of persistent collections (by some referred to as
functional data structures). Persistent in the sense that they are immutable.
All methods on a data structure that would normally mutate it instead return a
new copy of the structure containing the requested updates. The original
structure is left untouched.")
(license license:expat)))
(define-public python-exif-read
(package
(name "python-exif-read")
(version "3.0.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "ExifRead" version))
(sha256
(base32
"191c7sa0rca8wkspfq8nlfa6davh743mqkzrcayz5gcx2rja7i8a"))))
(build-system python-build-system)
(arguments `(#:tests? #f)) ; no tests
(home-page "https://github.com/ianare/exif-py")
(synopsis "Python library to extract EXIF data from image files")
(description
"ExifRead is a Python library to extract EXIF data from tiff and jpeg
files.")
(license license:bsd-3)))
(define-public python-pyld
(package
(name "python-pyld")
(version "2.0.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "PyLD" version))
(sha256
(base32 "1k7ars8n6kramkvadxgy0qfsi5g1hipyha4wqw8l75mw1l7ka7ii"))))
(build-system python-build-system)
(native-inputs (list python-lxml))
(propagated-inputs (list python-cachetools python-frozendict))
(home-page "https://github.com/digitalbazaar/pyld")
(synopsis "Python implementation of the JSON-LD specification")
(description "PyLD is an implementation of the JSON-LD specification.")
(license license:bsd-3)))
(define-public python-cli-helpers
(package
(name "python-cli-helpers")
(version "2.2.1")
(source
(origin
;; There's no source tarball on PyPI.
(method git-fetch)
(uri (git-reference
(url "https://github.com/dbcli/cli_helpers")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1hzavh9v9lkd1dn9f0nvg80f7v4banxvcrj10zy72przqz51k1sb"))))
(build-system python-build-system)
(native-inputs
(list python-pytest))
(propagated-inputs
(list python-wcwidth python-configobj python-tabulate))
(home-page "https://github.com/dbcli/cli_helpers")
(synopsis "Helpers for building command-line apps")
(description
"CLI Helpers is a Python package that makes it easy to perform common
tasks when building command-line apps. It's a helper library for command-line
interfaces.")
(license license:bsd-3)))
(define-public python-click
(package
(name "python-click")
(version "8.1.7")
(source
(origin
(method url-fetch)
(uri (pypi-uri "click" version))
(sha256
(base32
"1pm6khdv88h764scik67jki98xbyj367h591j8hpwy4y8nnm766a"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv")))))))
(native-inputs (list python-pytest))
(home-page "https://palletsprojects.com/p/click/")
(synopsis "Command line library for Python")
(description
"Click is a Python package for creating command line interfaces in a
composable way with as little code as necessary. Its name stands for
\"Command Line Interface Creation Kit\". It's highly configurable but comes
with sensible defaults out of the box.")
(license license:bsd-3)))
(define-public python-click-7
(package (inherit python-click)
(name "python-click")
(version "7.1.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "click" version))
(sha256
(base32 "06kbzd6sjfkqan3miwj9wqyddfxc2b6hi7p5s4dvqjb3gif2bdfj"))))
(arguments `())))
(define-public python-clickgen
(package
(name "python-clickgen")
(version "2.1.3")
(source (origin
(method url-fetch)
(uri (pypi-uri "clickgen" version))
(sha256
(base32
"010j9zz0gd2za5l4hibicypnfw721x0gxp3rr0329bc97vw5maha"))))
(build-system python-build-system)
(propagated-inputs
(list python-pillow python-toml python-numpy python-attrs))
(inputs (list libx11 libpng libxcursor))
(native-inputs (list python-wheel))
(home-page "https://github.com/ful1e5/clickgen")
(synopsis "The hassle-free cursor building toolbox")
(description
"Clickgen is an API for building X11 and Windows cursors from .png files.
clickgen is using @code{anicursorgen} and @code{xcursorgen} under the hood.")
(license license:expat)))
(define-public python-clickhouse-connect
(package
(name "python-clickhouse-connect")
(version "0.6.1")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/ClickHouse/clickhouse-connect")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1s0lk7xdq8f351cmpbp6jidqi5zdazrdba7w7fxph0w8sd74amry"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
;; All these tests require docker-compose
'(list "--ignore-glob=tests/integration_tests/*")
#:phases
'(modify-phases %standard-phases
(add-after 'unpack 'patch-pyproject
(lambda _
;; Our version of pytest is confused by this field.
(substitute* "pyproject.toml"
(("^env_files.*") ""))))
(add-before 'check 'build-extensions
(lambda _
;; Cython extensions have to be built before running the tests.
(invoke "python" "setup.py" "build_ext" "--inplace"))))))
(propagated-inputs
(list python-arrow
python-certifi
python-lz4
python-numpy
python-orjson
python-pandas
python-pytz
python-sqlalchemy
python-urllib3
python-zstandard))
(native-inputs
(list python-cython
python-pytest))
(home-page "https://github.com/ClickHouse/clickhouse-connect")
(synopsis
"ClickHouse database core driver for Python, Pandas, and Superset")
(description
"This package provides a high performance core database driver for
connecting ClickHouse to Python, Pandas, and Superset.")
(license license:asl2.0)))
(define-public python-cligj
(package
(name "python-cligj")
(version "0.7.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "cligj" version))
(sha256
(base32
"09vbkik6kyn6yrqzl2r74vaybjk8kjykvi975hy3fsrm4gb17g54"))))
(build-system python-build-system)
(propagated-inputs
(list python-click))
(native-inputs
(list python-pytest-cov))
(home-page "https://github.com/mapbox/cligj")
(synopsis "Click params for command line interfaces to GeoJSON")
(description
"cligj is for Python developers who create command line interfaces
for geospatial data. cligj allows you to quickly build consistent,
well-tested and interoperable CLIs for handling GeoJSON.")
(license license:bsd-3)))
(define-public python-cloup
(package
(name "python-cloup")
(version "2.1.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "cloup" version))
(sha256
(base32
"05c6cjpnf9s72gyn5dckxbmd8rf2kgdzfsl7pqzrnc1lcdl13zmv"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-click))
(native-inputs (list python-pytest))
(home-page "https://github.com/janLuke/cloup")
(synopsis "Extension library for python-click")
(description
"Cloup enriches Click with several features that make it more expressive
and configurable such as option groups, constraints, subcommand aliases,
subcommands sections and a themeable HelpFormatter.")
(license license:bsd-3)))
(define-public python-vcversioner
(package
(name "python-vcversioner")
(version "2.16.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "vcversioner" version))
(sha256
(base32
"16z10sm78jd7ca3jbkgc3q5i8a8q7y1h21q1li21yy3rlhbhrrns"))))
(build-system python-build-system)
(synopsis "Python library for version number discovery")
(description "Vcversioner is a Python library that inspects tagging
information in a variety of version control systems in order to discover
version numbers.")
(home-page "https://github.com/habnabit/vcversioner")
(license license:isc)))
(define-public python-jdcal
(package
(name "python-jdcal")
(version "1.4.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "jdcal" version))
(sha256
(base32
"1j6g19jf21qprjsr8h0r7nsbss366gy8j9izq8cz53gbjvh74a27"))))
(build-system python-build-system)
(arguments
(list #:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv")))))))
(native-inputs
(list python-pytest))
(home-page "https://github.com/phn/jdcal")
(synopsis "Functions to convert between Julian dates Gregorian dates")
(description "This Python library provides functions for converting
between Julian dates and Gregorian dates.")
(license license:bsd-2)))
(define-public python-jsondiff
(package
(name "python-jsondiff")
(version "1.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "jsondiff" version))
(sha256
(base32
"00v3689175aqzdscrxpffm712ylp8jvcpqdg51ca22ni6721p51l"))))
(build-system python-build-system)
(native-inputs
(list python-nose python-nose-random))
(home-page
"https://github.com/fzumstein/jsondiff")
(synopsis "Compare JSON and JSON-like structures in Python")
(description "@code{jsondiff} is a Python library which lets you
compare, diff, and patch JSON and JSON-like structures in Python.")
(license license:expat)))
(define-public python-ddlparse
(package
(name "python-ddlparse")
(version "1.10.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ddlparse" version))
(sha256
(base32 "1nh8m6rxslwk05daxshxmgk41qfp18yynydba49b13l4m8dnh634"))))
(build-system pyproject-build-system)
(native-inputs
(list python-codecov
python-coveralls
python-pytest
python-pytest-cov
python-tox))
(propagated-inputs (list python-pyparsing))
(home-page "https://github.com/shinichi-takii/ddlparse")
(synopsis "Parses and converts DDL to BigQuery JSON schema")
(description "This package provides @{ddlparse}, a Python library to parse
and convert DDL to BigQuery JSON schema.")
(license license:bsd-3)))
(define-public python-jsonschema
(package
(name "python-jsonschema")
;; XXX: Update to the latest version requires new build system - Hatch
;; https://hatch.pypa.io/
(version "4.5.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "jsonschema" version))
(sha256
(base32 "1z0x22691jva7lwfcfh377jdmlz68zhiawxzl53k631l34k8hvbw"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-before 'build 'pretend-version
;; The version string is usually derived via setuptools-scm, but
;; without the git metadata available, the version string is set to
;; '0.0.0'.
(lambda _
(setenv "SETUPTOOLS_SCM_PRETEND_VERSION" #$version)))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(setenv "JSON_SCHEMA_TEST_SUITE" "json")
(invoke "trial" "jsonschema")))))))
(native-inputs (list python-setuptools-scm python-twisted))
(propagated-inputs
(list python-attrs
python-importlib-metadata
python-pyrsistent
python-typing-extensions))
(home-page "https://github.com/Julian/jsonschema")
(synopsis "Implementation of JSON Schema for Python")
(description
"Jsonschema is an implementation of JSON Schema for Python.")
(license license:expat)))
(define-public python-jsonschema-3
(package
(inherit python-jsonschema)
(version "3.2.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "jsonschema" version))
(sha256
(base32
"0ykr61yiiizgvm3bzipa3l73rvj49wmrybbfwhvpgk3pscl5pa68"))))
(arguments
(substitute-keyword-arguments (package-arguments python-jsonschema)
((#:phases phases)
#~(modify-phases #$phases
(replace 'pretend-version
(lambda _
(setenv "SETUPTOOLS_SCM_PRETEND_VERSION" #$version)))))))))
(define-public python-schema
(package
(name "python-schema")
(version "0.6.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "schema" version))
(sha256
(base32
"1lw28j9w9vxyigg7vkfkvi6ic9lgjkdnfvnxdr7pklslqvzmk2vm"))))
(build-system python-build-system)
(native-inputs
(list python-pytest))
(home-page "https://github.com/keleshev/schema")
(synopsis "Simple data validation library")
(description
"@code{python-schema} is a library for validating Python data
structures, such as those obtained from config-files, forms, external
services or command-line parsing, converted from JSON/YAML (or
something else) to Python data-types.")
(license license:psfl)))
(define-public python-schema-0.5
(package (inherit python-schema)
(version "0.5.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "schema" version))
(sha256
(base32
"10zqvpaky51kgb8nd42bk7jwl8cn2zvayxjpdc1wwmpybj92x67s"))))))
(define-public python-kitchen
(package
(name "python-kitchen")
(version "1.2.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "kitchen" version))
(sha256
(base32
"1zakh6l0yjvwic9p0nkvmbidpnkygkxbigh2skmb5gccyrhbp7xg"))))
(build-system python-build-system)
(propagated-inputs
(list python-chardet))
(home-page "https://github.com/fedora-infra/kitchen")
(synopsis "Python API for snippets")
(description "@code{kitchen} module provides a python API for all sorts of
little useful snippets of code that everybody ends up writing for their projects
but never seem big enough to build an independent release. Use kitchen and stop
cutting and pasting that code over and over.")
(license (list license:lgpl2.1+
;; subprocess.py, test_subprocess.py,
;; kitchen/pycompat25/defaultdict.py:
license:psfl))))
(define-public python-roman
(package
(name "python-roman")
(version "3.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "roman" version))
(sha256
(base32
"0gyp2bmw47jgpm8j64gydzqq838bgxz5gh6cm57lxlr7p26sqiic"))))
(build-system python-build-system)
(home-page "https://github.com/zopefoundation/roman")
(synopsis "Integer to Roman numerals converter")
(description
"This package provides a small helper library to convert Arabic Numbers
to Roman Numerals.")
(license license:psfl)))
(define-public python-rollbar
(package
(name "python-rollbar")
(version "1.0.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "rollbar" version))
(sha256
(base32
"1bzkgp4r79d789q15vnjji2gcb34bnksx9l7q9pjkw12kzjbfiv3"))))
(build-system python-build-system)
(native-inputs (list python-pytest-runner python-unittest2))
(inputs (list python-requests python-six python-httpx python-blinker
python-webob))
(home-page "https://github.com/rollbar/pyrollbar")
(synopsis "Notifier for exceptions, errors, and log messages to Rollbar")
(description
"Python SDK for reporting exceptions, errors, and log messages
to @url{https://rollbar.com/, Rollbar}.
Capabilities include:
@itemize @bullet
@item Sending messages and exceptions with arbitrary context
@item Getting back aggregates
@item Debugging production issues
@end itemize")
(license license:expat)))
(define-public python-unidecode
(package
(name "python-unidecode")
(version "1.1.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "Unidecode" version))
(sha256
(base32
"1s6cp2lv4m0f00hjckjz8p6m7d3n3v16jvg353llf5ia1iqsnsib"))))
(build-system python-build-system)
(home-page "https://pypi.org/project/Unidecode/")
(synopsis "ASCII transliterations of Unicode text")
(description
"Unidecode provides ASCII transliterations of Unicode text. Unidecode is
useful when integrating with legacy code that doesn't support Unicode, or for
ease of entry of non-Roman names on a US keyboard, or when constructing ASCII
machine identifiers from human-readable Unicode strings that should still be
somewhat intelligible.")
(license license:gpl2+)))
(define-public python-text-unidecode
(package
(name "python-text-unidecode")
(version "1.3")
(source (origin
(method url-fetch)
(uri (pypi-uri "text-unidecode" version))
(sha256
(base32
"14xb99fdv52j21dsljgsbmbaqv10ps4b453p229r29sdn4xn1mms"))))
(build-system python-build-system)
(arguments
'(#:phases (modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "pytest" "-vv"))))))
(native-inputs
(list python-pytest))
(home-page "https://github.com/kmike/text-unidecode/")
(synopsis "Decode Unicode data")
(description
"@code{text-unidecode} is a basic Python port of the @code{Text::Unidecode}
Perl library. It can create ASCII representations of Unicode data. In general
users should prefer the @code{python-unidecode} package which offers better
memory usage and transliteration quality.")
;; The user can choose either license.
(license (list license:clarified-artistic license:gpl2+))))
(define-public python-pyjwt
(package
(name "python-pyjwt")
(version "2.6.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "PyJWT" version))
(sha256
(base32
"1z85kwr945rbzrn5wabrsmck5x8disa9wc7b3y5gci7w65z5qa39"))))
(build-system pyproject-build-system)
(native-inputs
(list python-coverage
python-cryptography
python-pytest
python-sphinx
python-sphinx-rtd-theme))
(home-page "https://github.com/progrium/pyjwt")
(synopsis "JSON Web Token implementation in Python")
(description
"PyJWT is a JSON Web Token implementation written in Python.")
(license license:expat)))
(define-public python-pymsgbox
(package
(name "python-pymsgbox")
(version "1.0.6")
(source
(origin
(method git-fetch)
(uri (git-reference
;; LICENSE.txt is not present on pypi
(url "https://github.com/asweigart/PyMsgBox")
(commit "55926b55f46caa969c5ddb87990ebea2737bd66f")))
(file-name (git-file-name name version))
(sha256
(base32
"0zy7rjfpwlrd8b64j7jk2lb8m2npc21rnpwakpfvwgl4nxdy80rg"))))
(arguments
;; Circular dependency to run tests:
;; Tests need pyautogui, which depends on pymsgbox.
'(#:tests? #f))
(build-system python-build-system)
(home-page "https://github.com/asweigart/PyMsgBox")
(synopsis "Python module for JavaScript-like message boxes")
(description
"PyMsgBox is a simple, cross-platform, pure Python module for
JavaScript-like message boxes. Types of dialog boxes include:
@enumerate
@item alert
@item confirm
@item prompt
@item password
@end enumerate
")
(license license:bsd-3)))
(define-public python-pympler
(package
(name "python-pympler")
(home-page "https://pythonhosted.org/Pympler/")
(version "1.0.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "Pympler" version))
(sha256
(base32
"1ynkqpv2akldmvkll5vh5zhwj433s1d59iv0f76lygyak4silgwr"))))
(build-system python-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'skip-broken-test
(lambda _
;; FIXME: This test fails for no good reason:
;; https://github.com/pympler/pympler/issues/153
(substitute* "test/muppy/test_tracker.py"
(("^([[:blank:]]+)def test_stracker_create_summary" all indent)
(string-append indent "@unittest.skipIf(True, \
'Fails on Guix too for unknown reasons')\n" all))))))))
(synopsis "Measure, monitor and analyze memory behavior")
(description
"Pympler is a development tool to measure, monitor and analyze
the memory behavior of Python objects in a running Python application.
By pympling a Python application, detailed insight in the size and the
lifetime of Python objects can be obtained. Undesirable or unexpected
runtime behavior like memory bloat and other @samp{pymples} can easily
be identified.
A web profiling frontend exposes process statistics, garbage
visualisation and class tracker statistics.")
(license license:asl2.0)))
(define-public python-itsdangerous
(package
(name "python-itsdangerous")
(version "2.0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "itsdangerous" version))
(sha256
(base32
"1w6gfb2zhbcmrfj6digwzw1z68w6zg1q87rm6la2m412zil4swly"))))
(build-system python-build-system)
(home-page "https://palletsprojects.com/p/itsdangerous/")
(synopsis "Python library for passing data to/from untrusted environments")
(description
"Itsdangerous provides various helpers to pass trusted data to untrusted
environments and back.")
(license license:bsd-3)))
(define-public python-pyyaml
(package
(name "python-pyyaml")
(version "6.0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "PyYAML" version))
(sha256
(base32
"0hsa7g6ddynifrwdgadqcx80khhblfy94slzpbr7birn2w5ldpxz"))))
(build-system python-build-system)
(inputs
(list libyaml python-cython))
(home-page "https://pyyaml.org")
(synopsis "YAML parser and emitter for Python")
(description
"PyYAML is a YAML parser and emitter for Python. PyYAML features a
complete YAML 1.1 parser, Unicode support, pickle support, capable extension
API, and sensible error messages. PyYAML supports standard YAML tags and
provides Python-specific tags that represent an arbitrary Python object.")
(license license:expat)))
(define-public python-pyyaml-5
(package
(inherit python-pyyaml)
(version "5.4.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "PyYAML" version))
(sha256
(base32
"0pm440pmpvgv5rbbnm8hk4qga5a292kvlm1bh3x2nwr8pb5p8xv0"))))))
(define-public python-vine
(package
(name "python-vine")
(version "5.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "vine" version))
(sha256
(base32 "1q31krwxdvwawdn1kfqmpplix31d4jhs0qng26908hawsf0yjqlb"))))
(build-system pyproject-build-system)
(native-inputs
(list python-pytest python-case))
(home-page "https://github.com/celery/vine")
(synopsis "Promises for Python")
(description
"@code{vine} provides a special implementation of promises in that it can
be used both for \"promise of a value\" and lazy evaluation. The biggest
upside for this is that everything in a promise can also be a promise,
e.g. filters, callbacks and errbacks can all be promises.")
(license license:bsd-3)))
(define-public python-virtualenv
(package
(name "python-virtualenv")
(version "20.3.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "virtualenv" version))
(sha256
(base32
"1nbhnpzswcf3lmzn5xabmfdd7ki8r2w2i37y6wml54di6qi1l48c"))))
(build-system python-build-system)
(native-inputs
(list python-mock python-pytest python-setuptools-scm))
(propagated-inputs
(list python-appdirs python-distlib python-filelock python-six))
(home-page "https://virtualenv.pypa.io/")
(synopsis "Virtual Python environment builder")
(description
"Virtualenv is a tool to create isolated Python environments.")
(license license:expat)))
(define-public python-crossenv
(package
(name "python-crossenv")
(version "1.3.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "crossenv" version))
(sha256
(base32
"07rv4650n19740ixmnsf4qbxyqlgi7f5m1cy8cq0gl01q3r6hps4"))))
(build-system python-build-system)
(arguments
(list #:tests? #f)) ; tests not distributed on pypi
(home-page "https://github.com/benfogle/crossenv")
(synopsis "Cross-compiling virtualenv for Python")
(description "This package is a tool for cross-compiling extension
modules. It creates a special virtual environment such that @command{pip} or
@file{setup.py} will cross compile packages for you, usually with no further
work on your part.")
(license license:expat)))
(define-public python-virtualenv-clone
(package
(name "python-virtualenv-clone")
(version "0.5.7")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/edwardgeorge/virtualenv-clone")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"0p0d1y3axvjfnxlgwjx2374gikc8bmc82g0m7yashihbikh7pcxa"))))
(build-system python-build-system)
(arguments
(list #:phases #~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(delete-file "tox.ini")
(invoke "pytest" "-vvv" "tests")))))))
(native-inputs (list python-pytest
python-tox
python-virtualenv
python-coverage
python-wheel
python-tomli
python-hypothesis))
(home-page "https://github.com/edwardgeorge/virtualenv-clone")
(synopsis "Clone a non-relocatable virtualenv cleanly")
(description
"Clone non-relocatable virtualenvs without breaking site-packages.")
(license license:expat)))
(define-public python-uc-micro-py
(package
(name "python-uc-micro-py")
(version "1.0.1")
(source (origin
(method git-fetch) ;for tests
(uri (git-reference
(url "https://github.com/tsutsu3/uc.micro-py")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"17f55gi55rg47nm88fn3f8851ph03dgykdp011lxr3j6hk18lyfv"))))
(build-system pyproject-build-system)
(native-inputs (list python-pytest))
(home-page "https://github.com/tsutsu3/uc.micro-py")
(synopsis "Unicode data files for linkify-it-py projects")
(description "This package contains a micro subset of Unicode data files
for linkify-it-py projects.")
(license license:expat)))
(define-public python-linkify-it-py
(package
(name "python-linkify-it-py")
(version "2.0.0")
(source (origin
(method git-fetch) ;for tests
(uri (git-reference
(url "https://github.com/tsutsu3/linkify-it-py")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0fg0a1lc8xbb62y9krxcp708ll58dxcwm8i7rrwpkd5sh2229f6x"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-uc-micro-py))
(native-inputs (list python-pytest))
(home-page "https://github.com/tsutsu3/linkify-it-py")
(synopsis "Links recognition library with full Unicode support")
(description "This is Python port of
@url{https://github.com/markdown-it/linkify-it, linkify-it}, which is a links
recognition library with full Unicode support. It has features like:
@itemize
@item Full unicode support, with @i{astral} characters
@item International domains support
@item Allows rules extension and custom normalizers.
@end itemize")
(license license:expat)))
(define-public python-makefun
(package
(name "python-makefun")
(version "1.15.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "makefun" version))
(sha256
(base32
"19a8dga8rnmjn5gy1cy1wdi28swbkdkypwbqikbxil6ynqcg3c20"))))
(build-system pyproject-build-system)
(native-inputs
(list python-pytest python-setuptools-scm))
(home-page "https://github.com/smarie/python-makefun")
(synopsis "Library to dynamically create python functions")
(description "@code{makefun} helps create functions dynamically with a
given signature. It was largely inspired by @code{python-decorator} and
@code{functools}.")
(license license:bsd-3)))
(define-public python-markdown-it-py
(package
(name "python-markdown-it-py")
(version "2.1.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "markdown-it-py" version))
(sha256
(base32
"1nh75i72584r70alhqc479gys04s5m5g3vq601yf2njbs7z5jzng"))))
(build-system pyproject-build-system)
(arguments (list #:tests? #f)) ;pypi source does not contains tests
(native-inputs (list python-flit))
(propagated-inputs
(list python-mdurl
python-typing-extensions))
(home-page "https://github.com/executablebooks/markdown-it-py")
(synopsis "Python port of markdown-it")
(description
"This is a Python port of @code{markdown-it}, and some of its associated
plugins. The driving design philosophy of the port has been to change as
little of the fundamental code structure (file names, function name, etc) as
possible.")
(license license:expat)))
(define-public python-markupsafe
(package
(name "python-markupsafe")
(version "2.1.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "MarkupSafe" version))
(sha256
(base32
"0jqxp5sfrc0byp6bk0gwdmildi4mck2gprp42afri3z4r5y1k4bz"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv")))))))
(native-inputs
(list python-pytest))
(home-page "https://github.com/mitsuhiko/markupsafe")
(synopsis "XML/HTML/XHTML markup safe string implementation for Python")
(description
"Markupsafe provides an XML/HTML/XHTML markup safe string implementation
for Python.")
(license license:bsd-3)))
(define-public python-jinja2
(package
(name "python-jinja2")
(version "3.1.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Jinja2" version))
(sha256
(base32 "0lp86yadzf8dph67f6g3yxmvnhrzzi863z58jmsrx2j059q1ld9i"))))
(build-system pyproject-build-system)
(native-inputs (list python-pytest))
(propagated-inputs (list python-markupsafe))
(home-page "https://jinja.palletsprojects.com/")
(synopsis "Python template engine")
(description
"Jinja2 is a small but fast and easy to use stand-alone template engine
written in pure Python.")
(license license:bsd-3)))
(define-public python-jinja2-time
(package
(name "python-jinja2-time")
(version "0.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "jinja2-time" version))
(sha256
(base32
"0h0dr7cfpjnjj8bgl2vk9063a53649pn37wnlkd8hxjy656slkni"))))
(build-system python-build-system)
(propagated-inputs
(list python-arrow python-jinja2))
(home-page
"https://github.com/hackebrot/jinja2-time")
(synopsis "Jinja2 Extension for Dates and Times")
(description
"This package provides an extension for the template engine Jinja2. It
adds a 'now' tag providing a convenient access to the arrow.now() API from
templates. A format string can be provided to control the output.")
(license license:expat)))
(define-public python-pypugjs
(package
(name "python-pypugjs")
(version "5.9.12")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/kakulukia/pypugjs")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0zj7a560h973cl7brfw1nmyhgm8rp8j80wnih0shvhmw4ql23lpa"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases #~(modify-phases %standard-phases
;; Our pyramid is outdated and pyramid-mako is not packaged.
(add-after 'unpack 'disable-pyramid
(lambda* (#:key inputs #:allow-other-keys)
(substitute* "setup.py"
(("'pyramid")
"#'pyramid"))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "python" "-m" "pytest" "-v"
"pypugjs/testsuite/")))))))
(native-inputs (list python-coverage
python-django
python-jinja2
python-flake8
python-flask
python-mako
python-nose
python-poetry-core
python-pytest
python-tornado-6
python-wheel))
(propagated-inputs (list python-charset-normalizer python-six))
(home-page "https://github.com/kakulukia/pypugjs")
(synopsis "Convert Pug source files into different template languages")
(description
"PyPugJS is a high-performance port of PugJS for Python, that converts
any @file{.pug} source into different template languages: Django, Jinja2,
Mako, and Tornado.")
(license license:expat))) ;; MIT
(define-public python-pysdl2
(package
(name "python-pysdl2")
(version "0.9.11")
(source (origin
(method url-fetch)
(uri (pypi-uri "PySDL2" version))
(sha256
(base32
"19id1qswgcj4v4j5kn49shq1xxx3slhjpm0102w87mczsdbi1rck"))))
(build-system python-build-system)
(arguments
(list #:tests? #f ;; Requires /dev/dri, OpenGL module, etc.
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'patch-paths
(lambda* (#:key inputs #:allow-other-keys)
(substitute* "sdl2/dll.py"
;; Disable pysdl2-dll. It can't be packaged on GNU Guix
;; as it duplicates an existing package (sdl2).
(("prepath = os\\.getenv\\('PYSDL2_DLL_PATH'\\)")
"prepath = \"system\"")
(("^import sdl2dll$") "")
(("postpath = os\\.getenv\\('PYSDL2_DLL_PATH'\\)")
"postpath = \"system\"")
(("DLL\\(.*, os\\.getenv\\(\"PYSDL2_DLL_PATH\"\\)\\)")
(string-append
"DLL(\"SDL2\", [\"SDL2\", \"SDL2-2.0\", \"SDL2-2.0.0\"], \""
(dirname (search-input-file inputs "/lib/libSDL2.so"))
"\")")))
(substitute* "sdl2/sdlimage.py"
(("os\\.getenv\\(\"PYSDL2_DLL_PATH\"\\)")
(string-append
"\""
(dirname (search-input-file inputs "/lib/libSDL2_image.so"))
"\"")))
(substitute* "sdl2/sdlgfx.py"
(("os\\.getenv\\(\"PYSDL2_DLL_PATH\"\\)")
(string-append
"\""
(dirname (search-input-file inputs "/lib/libSDL2_gfx.so"))
"\"")))
(substitute* "sdl2/sdlmixer.py"
(("os\\.getenv\\(\"PYSDL2_DLL_PATH\"\\)")
(string-append
"\""
(dirname (search-input-file inputs "/lib/libSDL2_mixer.so"))
"\"")))
(substitute* "sdl2/sdlttf.py"
(("os\\.getenv\\(\"PYSDL2_DLL_PATH\"\\)")
(string-append
"\""
(dirname (search-input-file inputs "/lib/libSDL2_ttf.so"))
"\""))))))))
(inputs
(list sdl2 sdl2-image sdl2-gfx sdl2-mixer sdl2-ttf))
(home-page "https://github.com/py-sdl/py-sdl2")
(synopsis "Python bindings around the SDL2 game development library")
(description "PySDL2 is a pure Python wrapper around the @code{SDL2},
@code{SDL2_mixer}, @code{SDL2_image}, @code{SDL2_ttf}, and @code{SDL2_gfx}
libraries. Instead of relying on C code, it uses the built-in ctypes module
to interface with SDL2, and provides simple Python classes and wrappers for
common SDL2 functionality.")
(license license:cc0)))
(define-public python-pystache
(package
(name "python-pystache")
(version "0.6.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "pystache" version))
(sha256
(base32
"03a73ppf5vxnsk6az5ackvc0hp6xqv2f4hi1s5c4nk4s2jr95gwk"))))
(build-system python-build-system)
(arguments
'(#:tests? #f)) ; FIXME: Python 3 tests are failing.
(home-page "http://defunkt.io/pystache/")
(synopsis "Python logic-less template engine")
(description
"Pystache is a Python implementation of the framework agnostic,
logic-free templating system Mustache.")
(license license:expat)))
(define-public python-pystitcher
(package
(name "python-pystitcher")
(version "1.0.4")
(source
(origin
(method git-fetch)
(uri
(git-reference
(url "https://github.com/captn3m0/pystitcher")
(commit
(string-append "v" version))))
(file-name
(git-file-name name version))
(sha256
(base32 "03yrzqhcsjdj5zprrk3bh5bbyqfy3vfhxra9974vmkir3m121394"))))
(build-system python-build-system)
(inputs
(list python-html5lib python-importlib-metadata python-markdown
python-pypdf3 python-validators))
(home-page "https://github.com/captn3m0/pystitcher")
(synopsis "Declaratively stitch together a PDF file from multiple sources")
(description
"This package stitches your PDF files together, generating customizable
bookmarks using a declarative input in the form of a markdown file.")
(license license:expat)))
(define-public python-joblib
(package
(name "python-joblib")
(version "1.3.2")
(source (origin
(method url-fetch)
(uri (pypi-uri "joblib" version))
(sha256
(base32
"1cbjjzsh9hzaqr2cqja95673p7j88b8bd02hjpkq8xz147k6by4j"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags ; disabled to avoid having to depend on ipython/jupyter
#~(list "-k" "not test_parallel_call_cached_function_defined_in_jupyter")))
(native-inputs (list python-pytest))
(propagated-inputs (list python-psutil))
(home-page "https://joblib.readthedocs.io/")
(synopsis "Using Python functions as pipeline jobs")
(description
"Joblib is a set of tools to provide lightweight pipelining in Python.
In particular, joblib offers: transparent disk-caching of the output values
and lazy re-evaluation (memoize pattern), easy simple parallel computing
logging and tracing of the execution.")
(license license:bsd-3)))
(define-public python-daemon
(package
(name "python-daemon")
(version "3.0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "python-daemon" version))
(sha256
(base32
"1rfsnij687hk97ppzs2q6mwmxgr632nh672ajd0gzsppf8ilamvc"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'check 'adjust-tests
(lambda _
;; FIXME: Determine why test fails
(substitute* "test/test_daemon.py"
(("test_detaches_process_context")
"skip_test_detaches_process_context"))
(substitute* "test/scaffold.py"
(("test_exception_instance")
"skip_test_exception_instance")
(("test_exception_types")
"skip_test_exception_types")))))))
(propagated-inputs
(list python-lockfile python-packaging python-setuptools))
(native-inputs
(list python-docutils
python-testscenarios
python-testtools))
(home-page "https://pagure.io/python-daemon/")
(synopsis "Python library for making a Unix daemon process")
(description "Python-daemon is a library that assists a Python program to
turn itself into a well-behaved Unix daemon process, as specified in PEP 3143.
This library provides a @code{DaemonContext} class that manages the following
important tasks for becoming a daemon process:
@enumerate
@item Detach the process into its own process group.
@item Set process environment appropriate for running inside a chroot.
@item Renounce suid and sgid privileges.
@item Close all open file descriptors.
@item Change the working directory, uid, gid, and umask.
@item Set appropriate signal handlers.
@item Open new file descriptors for stdin, stdout, and stderr.
@item Manage a specified PID lock file.
@item Register cleanup functions for at-exit processing.
@end enumerate")
;; Only setup.py is gpl3+, everything else is apache 2.0 licensed.
(license (list license:asl2.0 license:gpl3+))))
(define-public python-annotated-types
(package
(name "python-annotated-types")
(version "0.6.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "annotated_types" version))
(sha256
(base32 "0paaz0i4xqk335ji5w887i2bhgm2krnzr6by4sfgsgz50zl3jcsn"))))
(build-system pyproject-build-system)
(native-inputs
(list python-hatchling
python-pytest))
(propagated-inputs (list python-typing-extensions))
(home-page "https://github.com/annotated-types/annotated-types")
(synopsis "Reusable constraint types to use with typing.Annotated")
(description "This package provides metadata objects which can be used to
represent common constraints such as upper and lower bounds on scalar values and
collection sizes, a Predicate marker for runtime checks, and descriptions of how
we intend these metadata to be interpreted. In some cases, we also note
alternative representations which do not require this package.")
(license license:expat)))
(define-public python-anytree
(package
(name "python-anytree")
(version "2.8.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "anytree" version))
(sha256
(base32
"1aycpc387wqz7h9w2p53qxn43qsh3m6by6ak4kkc66x9aprr63rz"))))
(build-system python-build-system)
(propagated-inputs
(list python-six))
(native-inputs
(list ;; For tests.
graphviz ;for 'dot'
python-nose))
(home-page "https://github.com/c0fec0de/anytree")
(synopsis "Lightweight tree data library")
(description
"@code{anytree} is a simple, lightweight, and extensible tree data
structure for Python.")
(license license:asl2.0)))
(define-public autokey
(package
(name "autokey")
(version "0.96.0")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/autokey/autokey")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1v19196swihc12bcg0d9s07gfc3a44b9y7g6rqhb82qxm4p8jmbp"))
(modules '((guix build utils)))
(snippet
#~(begin
;; XXX: skip test depending on .git/
(delete-file "tests/test_common.py")))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
;; Use 'prefix' instead of '=' to allow the user to use additional
;; GI paths from their autokey scripts. GUIX_PYTHONPATH is already
;; wrapped with prefix in python-build-system's wrap.
(add-before 'wrap 'wrap-autokey
(lambda* (#:key inputs #:allow-other-keys)
(let ((gi-typelib-path (getenv "GI_TYPELIB_PATH"))
(path (map dirname
;; see lib/autokey/UI_common_functions.py
(list (search-input-file inputs "/bin/wmctrl")
(search-input-file inputs "/bin/zenity")
(search-input-file inputs "/bin/ipython3")
(search-input-file inputs "/bin/python3")))))
(for-each
(lambda (program)
(wrap-program program
`("PATH" ":" prefix ,path)
`("GI_TYPELIB_PATH" ":" prefix (,gi-typelib-path))))
(map (lambda (name)
(string-append #$output "/bin/" name))
'("autokey-gtk"
"autokey-shell"))))))
(add-before 'check 'setup-env-vars
(lambda _
;; tests/test_macro.py wants LANG set
(setenv "LANG" "")
;; required for tests/test_configmanager.py
(setenv "HOME" "/tmp"))))))
(native-inputs (list python-pytest python-pytest-cov python-pyhamcrest))
(inputs
(list bash-minimal ; for wrap-program
gtksourceview-3
libappindicator
libnotify
python-dbus
python-ipython
python-pygobject
python-pyinotify
python-pyqt+qscintilla
python-xlib
wmctrl
zenity))
(home-page "https://github.com/autokey/autokey")
(synopsis
"Keyboard and GUI automation utility")
(description
"AutoKey is a desktop automation utility for X11. It allows the automation of
virtually any task by responding to typed abbreviations and hotkeys. It
offers a full-featured GUI (GTK and QT versions) that makes it highly
accessible for novices, as well as a scripting interface offering the full
flexibility and power of the Python language.")
(license license:gpl3+)))
(define-public kalamine
(package
(name "kalamine")
(version "0.36")
(source
(origin
(method url-fetch)
(uri (pypi-uri "kalamine" version))
(sha256
(base32 "1xxncavq5a0dydhzpfjdxmqsddl77275d9k9giw1032bdyb9d5is"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-before 'check 'make-test-layouts
(lambda _
(apply invoke
(cons* "python" "-m" "kalamine.cli" "build"
(find-files "layouts" "\\.toml")))
(invoke "python" "-m" "kalamine.cli" "new" "test.toml"))))))
(propagated-inputs
(list python-click
python-livereload
python-lxml
python-progress
python-pyyaml
python-tomli))
;; TODO: Add python-pytest-ruff to native-inputs once it has been
;; packaged.
(native-inputs
(list python-hatchling python-mypy python-pytest))
(home-page "https://github.com/OneDeadKey/kalamine")
(synopsis "Keyboard layout maker")
(description
"Kalamine provides a CLI to create advanced keyboard layout from a
textual portable description. It also supports layout emulation via web
browser.")
(license license:expat)))
(define-public python-dm-tree
(package
(name "python-dm-tree")
(version "0.1.8")
(source (origin
(method url-fetch)
(uri (pypi-uri "dm-tree" version))
(sha256
(base32 "0c4l9gpaqd7j34qwnpjibv53j9sm0nyl0wcy8dvh76772jxspjhg"))))
(build-system pyproject-build-system)
;; We link the static abseil libraries here to avoid problems in
;; downstream libraries using potentially different variants of
;; abseil-cpp. This is also what's done in the upstream CMake build.
(inputs (list pybind11 static-abseil-cpp python))
(propagated-inputs (list python-wheel
python-absl-py
python-attrs
python-numpy
python-wrapt))
(arguments
(list #:tests? #f
#:phases
#~(modify-phases %standard-phases
(add-before 'build 'build-shared-lib
(lambda _
(let* ((pybind11 #$(this-package-input "pybind11"))
(python #$(this-package-input "python"))
(version (python-version python))
(abseil-cpp #$(this-package-input "abseil-cpp")))
;; Delete default cmake build.
(substitute* "setup.py"
(("ext_modules.*") "")
(("cmdclass.*") ""))
;; Actual build phase.
(mkdir-p "build/temp/tree/")
(invoke
"gcc" "-pthread" "-Wno-unused-result" "-Wsign-compare"
"-DNDEBUG" "-g" "-fwrapv" "-O3" "-Wall"
"-fno-semantic-interposition" "-fPIC"
"-I" (string-append pybind11
"/lib/python" version
"/site-packages/pybind11/include")
"-I" (string-append python "/include/python"
version)
"-I" (string-append abseil-cpp "/include")
"-c" "tree/tree.cc"
"-o" "build/temp/tree/tree.o"
"-fvisibility=hidden" "-g0")
(mkdir-p "build/lib/tree")
(invoke
"g++" "-pthread" "-shared"
(string-append "-Wl," "-rpath=" python "/lib")
"-fno-semantic-interposition"
"build/temp/tree/tree.o"
"-L" (string-append python "/lib")
(string-append abseil-cpp "/lib/libabsl_int128.a")
(string-append abseil-cpp "/lib/libabsl_raw_hash_set.a")
(string-append abseil-cpp "/lib/libabsl_raw_logging_internal.a")
(string-append abseil-cpp "/lib/libabsl_strings.a")
(string-append abseil-cpp "/lib/libabsl_strings_internal.a")
(string-append abseil-cpp "/lib/libabsl_throw_delegate.a")
"-o" "build/lib/tree/_tree.so")))))))
(home-page "https://github.com/deepmind/tree")
(synopsis "Work with nested data structures in Python")
(description "Tree is a python library for working with nested data
structures. In a way, @code{tree} generalizes the builtin @code{map} function
which only supports flat sequences, and allows you to apply a function to each
leaf preserving the overall structure.")
(license license:asl2.0)))
(define-public python-pyment
(package
(name "python-pyment")
(version "0.3.4")
(source
(origin
(method git-fetch)
(uri
(git-reference
(url "https://github.com/dadadel/pyment")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0gbx9wmqsxdx85v5sg79lv2zxmy16j5dwi8bip07i1nyvzc5gvn0"))))
(build-system python-build-system)
(native-inputs (list python-pytest))
(home-page "https://github.com/dadadel/pyment/")
(synopsis "Convert Python docstrings automatically")
(description "Pyment is a command line tool and library that can be
used to convert between several docstring styles.")
(license license:gpl3+)))
(define-public python-docstring-parser
(package
(name "python-docstring-parser")
(version "0.15")
(source (origin
(method url-fetch)
(uri (pypi-uri "docstring_parser" version))
(sha256
(base32
"10pnbg2q0ic1h6pwbyhhqd075fv67sq07k3gjncmi1mix29w1pa8"))))
(build-system pyproject-build-system)
(native-inputs (list python-poetry-core python-pytest))
(home-page "https://github.com/rr-/docstring_parser")
(synopsis "Parse Python docstrings in reST, Google and Numpydoc format")
(description "This package lets you parse Python docstrings in reST,
Google and Numpydoc format.")
(license license:expat)))
(define-public python-docutils
(package
(name "python-docutils")
(version "0.19")
(source (origin
(method url-fetch)
(uri (pypi-uri "docutils" version))
(sha256
(base32
"1rprvir116g5rz2bgzkzgyn6mv0z8582rz7bgxbpy2y3adkmm69k"))))
(build-system python-build-system)
(arguments
'(#:phases (modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(if tests?
(invoke "python" "test/alltests.py")
(format #t "test suite not run~%")))))))
(home-page "https://docutils.sourceforge.net/")
(synopsis "Python Documentation Utilities")
(description
"Docutils is a modular system for processing documentation into useful
formats, such as HTML, XML, and LaTeX. It uses @dfn{reStructuredText}, an
easy to use markup language, for input.
This package provides tools for converting @file{.rst} files to other formats
via commands such as @command{rst2man}, as well as supporting Python code.")
;; Most of the source code is public domain, but some source files are
;; licensed under the PFSL, BSD 2-clause, and GPLv3+ licenses.
(license (list license:public-domain license:psfl license:bsd-2 license:gpl3+))))
;; awscli refuses to be built with docutils < 0.16.
(define-public python-docutils-0.15
(package
(inherit python-docutils)
(version "0.15")
(source (origin
(method url-fetch)
(uri (pypi-uri "docutils" version))
(sha256
(base32
"0ja8q6mdj6xv62jjw3phv8j5nfqi5x8hnfy4pqfcjcgz4b34k8sl"))))
;; tests contain Python 2 syntax.
(arguments '(#:tests? #false))
(native-inputs
(list python-setuptools-57))))
(define-public python-docx
(package
(name "python-docx")
(version "1.1.2")
(source (origin
(method url-fetch)
(uri (pypi-uri "python_docx" version))
(sha256
(base32
"1z9ffsvksaaxr90ijzq4k3adzb6p5ipy2j3rrbfjl05rjlpg5w8c"))))
(build-system pyproject-build-system)
(native-inputs
(list behave
python-pyparsing
python-pytest
python-pytest-cov
python-pytest-xdist))
(propagated-inputs
(list python-lxml python-typing-extensions))
(home-page "https://github.com/python-openxml/python-docx/")
(synopsis "Python library to create and modify Microsoft Word documents")
(description "This Python library can be used to create and update
Microsoft Word (.docx) documents.")
(license license:expat)))
(define-public python-restructuredtext-lint
(package
(name "python-restructuredtext-lint")
(version "1.3.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "restructuredtext-lint" version))
(sha256
(base32
"026rdy5h82ng4vqxk8fnprii9d6qxf7hkygiv0a8afjvdlsxmcwp"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(delete 'check)
(add-after 'install 'check
(lambda* (#:key inputs outputs tests? #:allow-other-keys)
(when tests?
(add-installed-pythonpath inputs outputs)
(invoke "nosetests" "-v"))
#t)))))
(propagated-inputs
(list python-docutils))
(native-inputs
(list python-nose))
(home-page "https://github.com/twolfson/restructuredtext-lint")
(synopsis "reStructuredText linter")
(description "This package provides a linter for the reStructuredText
format.")
(license license:unlicense)))
(define-public python-click-repl
(package
(name "python-click-repl")
(version "0.2.0")
(source
(origin
(method git-fetch) ; no tests in PyPI release
(uri (git-reference
(url "https://github.com/click-contrib/click-repl")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "16ybsnwlj2jlqcfxflky8jz7i3nhrd3f6mvkpgs95618l8lx994i"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key inputs outputs tests? #:allow-other-keys)
(when tests?
(add-installed-pythonpath inputs outputs)
(invoke "python" "-m" "pytest")))))))
(native-inputs
(list python-pytest))
(propagated-inputs
(list python-click python-prompt-toolkit python-six))
(home-page "https://github.com/untitaker/click-repl")
(synopsis "REPL plugin for Click")
(description "This package provides a REPL plugin for Click.")
(license license:expat)))
(define-public python-doc8
(package
(name "python-doc8")
(version "0.8.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "doc8" version))
(sha256
(base32
"0hw5w8mpgsp51qg8nnq28p7y1jiksvz7a0axnn5bkgss3af9zy1d"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(delete 'check)
(add-after 'install 'check
(lambda* (#:key inputs outputs tests? #:allow-other-keys)
(when tests?
(add-installed-pythonpath inputs outputs)
(invoke "pytest" "-v"))
#t)))))
(propagated-inputs
(list python-chardet python-docutils python-restructuredtext-lint
python-six python-stevedore))
(native-inputs
(list python-testtools python-pytest))
(home-page "https://launchpad.net/doc8")
(synopsis
"Style checker for Sphinx (or other) RST documentation")
(description
"Doc8 is an opinionated style checker for reStructured Text and plain
text styles of documentation.")
(license license:asl2.0)))
(define-public python-pygdbmi
(package
(name "python-pygdbmi")
(version "0.11.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pygdbmi" version))
(sha256
(base32 "1c0z4snkjiyl1iq4m1k6liwg0b4pdv2as4bfyvcm0mpjzki6na3s"))))
(build-system pyproject-build-system)
(home-page "https://github.com/cs01/pygdbmi")
(synopsis "Parse gdb machine interface output with Python")
(description "This package provides a parse gdb machine interface output
with Python.")
(license license:expat)))
(define-public python-pygments
(package
(name "python-pygments")
(version "2.12.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Pygments" version))
(sha256
(base32
"1sr6iqh21xi6p8aba4wa9pqfhjbbpcvn9jcsx0ggy4lniw8idcay"))))
(build-system python-build-system)
(arguments
;; FIXME: Tests require sphinx, which depends on this.
'(#:tests? #f))
(home-page "https://pygments.org/")
(synopsis "Syntax highlighting")
(description
"Pygments is a syntax highlighting package written in Python.")
(license license:bsd-2)))
(define-public python-vdf
(package
(name "python-vdf")
(version "3.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "vdf" version))
(sha256
(base32
"1bz2gn04pl6rj2mawlzlirz1ygg4rdypq0pxbyg018873vs1jm7x"))))
(build-system pyproject-build-system)
(home-page "https://github.com/ValvePython/vdf")
(synopsis "Work with Valve's VDF text format")
(description "This package provides @code{python-vdf}, a library for
working with Valve's VDF text format.")
(license license:expat)))
(define-public python-pygments-github-lexers
(package
(name "python-pygments-github-lexers")
(version "0.0.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pygments-github-lexers" version))
(sha256
(base32
"0cz14clcc9z4pn79ll8hp3xzgsrfjscak5zfsvlgrz6ngkkmgjma"))))
(build-system python-build-system)
(propagated-inputs
(list python-pygments))
(home-page "https://github.com/liluo/pygments-github-lexers")
(synopsis "Pygments Github custom lexers")
(description "This package installs Github custom lexers to Pygments.")
(license license:bsd-3)))
(define-public python-pygtrie
(package
(name "python-pygtrie")
(version "2.5.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "pygtrie" version))
(sha256
(base32
"1qm4xdmzd4q5pc9h5gjdpr5m7lg06k8dvqnjn7d07d3fhani8d90"))))
(build-system pyproject-build-system)
(home-page "https://github.com/mina86/pygtrie")
(synopsis "Pure Python trie data structure implementation")
(description
"This package provides a pure Python trie data structure implementation.")
(license license:asl2.0)))
(define-public python-bump2version
(package
(name "python-bump2version")
(version "1.0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "bump2version" version))
(sha256
(base32 "1rinm4gv1fyh7xjv3v6r1p3zh5kl4ry2qifz5f7frx31mnzv4b3n"))))
(build-system python-build-system)
(arguments
;; XXX: Tests fail with "bumpversion: error: the following arguments are
;; required: --new-version".
`(#:tests? #false))
(home-page "https://github.com/c4urself/bump2version")
(synopsis "Version-bump your software with a single command!")
(description
"This package provides a small command line tool to simplify releasing
software by updating all version strings in your source code by the correct
increment. It also creates commits and tags.")
(license license:expat)))
(define-public python-bumpversion
(package
(name "python-bumpversion")
(version "0.5.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "bumpversion" version))
(sha256
(base32
"0zn7694yfipxg35ikkfh7kvgl2fissha3dnqad2c5bvsvmrwhi37"))))
(build-system python-build-system)
(home-page "https://github.com/peritus/bumpversion")
(synopsis "Tool to bump software version")
(description "This tool provides a command-line interface (CLI) to bump a
software version simply.")
(license license:expat)))
(define-public python-deprecated
(package
(name "python-deprecated")
(version "1.2.14")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/tantale/deprecated")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0knjsacv0r4gyz6ngjn3ih6352yz05r63ll73y2cg162bzcak48z"))))
(build-system pyproject-build-system)
(propagated-inputs
(list python-wrapt))
(native-inputs
(list python-bumpversion python-pytest))
(home-page "https://github.com/tantale/deprecated")
(synopsis "Python decorator to deprecate classes, functions or methods")
(description "The @code{deprecated} decorator provides a convenient way to deprecate
to deprecate classes, functions or methods.")
(license license:expat)))
(define-public python-pygithub
(package
(name "python-pygithub")
(version "1.55")
(source
;; We fetch from the Git repo because there are no tests in the PyPI
;; archive.
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/PyGithub/PyGithub")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "082bxffpy4h97dsay3l75cpgfjj10kywkvicnm6xscwvah285q9y"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest"))
#t)))))
(propagated-inputs
(list python-cryptography python-deprecated python-pyjwt
python-pynacl python-requests))
(native-inputs
(list python-httpretty python-pytest))
(home-page "https://pygithub.readthedocs.io/en/latest/")
(synopsis "Python library for the GitHub API")
(description "This library allows managing GitHub resources such as
repositories, user profiles, and organizations in your Python applications,
using version 3 of the GitHub application programming interface (API).")
(license license:lgpl3+)))
(define-public python-rellu
(package
(name "python-rellu")
(version "0.7")
(source
(origin
(method url-fetch)
(uri (pypi-uri "rellu" version))
(sha256
(base32
"1w0arpj1sm7vh29nrbnca4pnp8sx42l07r17inwqcjjf9bhng66x"))))
(build-system python-build-system)
(propagated-inputs
(list python-invoke python-pygithub))
(home-page "https://github.com/robotframework/rellu")
(synopsis "Utilities to create PyPI releases")
(description "This collection of utilities contains tooling and templates
to assist in creating releases on GitHub and publishing them on PyPI. It is
designed to be used by Robot Framework and tools and libraries in its
ecosystem, but can naturally be used also by other projects.")
(license license:asl2.0)))
(define-public python-robotframework
(package
(name "python-robotframework")
(version "5.0.1")
;; There are no tests in the PyPI archive.
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/robotframework/robotframework")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0jjr71npzrm5mv16pya3m2dqaqgf6sc45yca5kfmc5lfislig5b8"))
(patches (search-patches
"python-robotframework-atest.patch"
"python-robotframework-source-date-epoch.patch"))))
(build-system python-build-system)
(arguments
(list
#:modules '((guix build python-build-system)
(guix build utils)
(ice-9 ftw)
(ice-9 match)
(srfi srfi-26))
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'delete-problematic-tests
(lambda _
;; Tests such as 'Tilde and username in path' rely on HOME and
;; USER being set, on top of the user's /etc/passwd home
;; directory not being '/', as is the case in the Guix build
;; container.
(delete-file "atest/robot/standard_libraries/\
operating_system/path_expansion.robot")))
(add-before 'build 'build-and-install-doc
(lambda* (#:key outputs #:allow-other-keys)
(let ((doc (string-append (assoc-ref outputs "doc")
"/share/doc/robotframework")))
(invoke "invoke" "library-docs" "all")
(invoke "doc/userguide/ug2html.py" "dist") ;user guide
(mkdir-p doc)
(with-directory-excursion "dist"
(define user-guide-dir
(match (scandir "." (cut string-prefix?
"robotframework-userguide-" <>))
((dir) dir)
(_ (error "could not find the user guide directory"))))
(copy-recursively user-guide-dir doc)))))
(replace 'check
(lambda* (#:key native-inputs inputs tests?
#:allow-other-keys)
(when tests?
;; Some tests require timezone data. Otherwise, they
;; look up /etc/localtime, which doesn't exist, and
;; fail with:
;;
;; OverflowError: mktime argument out of range
(setenv "TZDIR"
(search-input-directory
(or native-inputs inputs) "share/zoneinfo"))
(setenv "TZ" "Europe/Paris")
(format #t "Running unit tests...~%")
(invoke "utest/run.py")
(format #t "Running acceptance tests...~%")
(invoke "xvfb-run" "atest/run.py")))))))
(native-inputs
(list python-docutils
python-jsonschema
python-invoke
python-lxml
python-pygments
python-pyyaml
python-rellu
`(,python "tk") ;used when building the HTML doc
python-xmlschema
scrot ;for taking screenshots
tzdata-for-tests
xvfb-run))
(outputs '("out" "doc"))
(home-page "https://robotframework.org")
(synopsis "Generic automation framework")
(description "Robot Framework is a generic automation framework for
acceptance testing, acceptance test driven development (ATDD), and robotic
process automation (RPA).")
(license license:asl2.0)))
(define-public python-robotframework-datadriver
(package
(name "python-robotframework-datadriver")
(version "1.6.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "robotframework-datadriver" version))
(sha256
(base32 "0mcyr3v98nvfnvffy096qp3jqslas7l8hh0j00lpi0mp12cd0qk9"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'check 'skip-problematic-tests
(lambda _
;; The test file 'tab-csv-file-name.tsv' contains special
;; characters for which there is no locale in the build
;; environment, causing one test to fail.
(delete-file-recursively "atest/TestCases/csv_reader_config")))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(with-directory-excursion "atest"
(invoke "sh" "run_atest.sh"))))))))
(native-inputs (list python-docutils
python-robotframework-stacktrace))
(propagated-inputs (list python-openpyxl
python-pandas
python-pygments
python-robotframework))
(home-page "https://github.com/Snooz82/robotframework-datadriver")
(synopsis "Data-driven test extension for Robot Framework")
(description "DataDriver is a data-driven extension for Robot Framework.
DataDriver uses the Listener Interface of Robot Framework to create new test
cases based on a data file that contains the test data. DataDriver supports
data files in the CSV, XLS or XLSX formats.")
(license license:asl2.0)))
(define-public python-robotframework-lint
;; There is no properly tagged release; the commit below seems to correspond
;; to the 0.9 stable release available from PyPI. The tests are not
;; included in the PyPI archive, so we fetch the sources from the upstream
;; Git repo.
(let ((commit "b0619ac58a8b1be125f9c98856a664594614570f")
(revision "0"))
(package
(name "python-robotframework-lint")
(version (git-version "1.1" ;version taken from 'rflint/version.py'
revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/boakley/robotframework-lint")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"180npmvzqync25b2scs878gv8q4y17dsinxyjcc10bw22msfap6b"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "python" "-m" "robot" "-A"
"tests/conf/default.args" "tests"))))))
(propagated-inputs
(list python-robotframework))
(home-page "https://github.com/boakley/robotframework-lint/")
(synopsis "Static analysis tool (linter) for Robot Framework")
(description "This package provides the @code{rflint} command-line
utility, a static analysis tool (linter) for Robot Framework source files.")
(license license:asl2.0))))
(define-public python-robotframework-pabot
(package
(name "python-robotframework-pabot")
(version "2.7.0")
(source
(origin
;; There are no tests in the PyPI archive.
(method git-fetch)
(uri (git-reference
(url "https://github.com/mkorpela/pabot")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"0246vvyaxax0nzlrffvp9vg6mh5jmvbbm87azignf0gakjidr7nn"))))
(build-system python-build-system)
(arguments
(list
#:phases #~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv" "tests")))))))
(propagated-inputs
(list python-robotframework python-robotframework-stacktrace))
(native-inputs
(list python-pytest))
(home-page "https://pabot.org")
(synopsis "Parallel test runner for Robot Framework")
(description "Pabot is a parallel executor for Robot Framework tests.")
(license license:asl2.0)))
(define-public python-sshtunnel
(package
(name "python-sshtunnel")
(version "0.4.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "sshtunnel" version))
(sha256
(base32
"1z7rdgpp9m36ysh9pfzrn3vyiaj05bkjvcjdhj8vz0fvfjkhxjz7"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests? (invoke "pytest" "-vv" "tests")))))))
(propagated-inputs (list python-paramiko))
(native-inputs (list openssh python-pytest python-mock))
(home-page "https://github.com/pahaz/sshtunnel")
(synopsis "Python SSH tunnels library")
(description "@code{sshtunnel} is a Python module for easily creating SSH
tunnels in the background, using Python.")
(license license:expat)))
(define-public python-robotframework-sshtunnellibrary
(package
(name "python-robotframework-sshtunnellibrary")
(version "1.0.0")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/C-Squad/robotframework-sshtunnellibrary")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1vkkmkb8iql13xpbyj4hvnnmfgzqlr8rffgryp2082cadb3w7xrd"))))
(build-system python-build-system)
(arguments
(list #:phases #~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "python" "-m" "unittest"
"discover" "-s" "test")))))))
(propagated-inputs (list python-robotframework python-sshtunnel))
(home-page "https://github.com/C-Squad/robotframework-sshtunnellibrary")
(synopsis "Alternative RobotFramework library for SSH tunnels")
(description "SSHTunnelLibrary is an alternative RobotFramework
library (to the more official one that comes from the
@code{robotframework-sshlibrary} package) to support SSH tunnels.")
(license license:asl2.0)))
(define-public python-robotframework-stacktrace
(package
(name "python-robotframework-stacktrace")
(version "0.4.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "robotframework-stacktrace" version))
(sha256
(base32 "19gnwr7da1zz9clhwsmvqfjf02d195i61lzpq4253dcsgrpb6v79"))))
(build-system python-build-system)
(arguments
;; The test suite fails (see:
;; https://github.com/MarketSquare/robotframework-stacktrace/issues/4).
`(#:tests? #f
#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(with-directory-excursion "tests"
(invoke "python" "-m" "robot" "."))))))))
(propagated-inputs (list python-robotframework))
(home-page "https://github.com/MarketSquare/robotframework-stacktrace")
(synopsis "Robot Framework listener to print a stack trace on error")
(description "StackTrace is a Robot Framework listener that prints a stack
trace directly to the terminal to ease debugging.")
(license license:asl2.0)))
(define-public python-robotframework-sshlibrary
(package
(name "python-robotframework-sshlibrary")
(version "3.8.0")
;; There are no tests in the PyPI archive.
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/robotframework/SSHLibrary")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1fn72hw7xacjjpl4dd6wynh2x63i9rk8iqhj3v640db21qpcnbkw"))
(patches (search-patches
"python-robotframework-sshlibrary-rf5-compat.patch"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'build 'build-and-install-doc
(lambda* (#:key outputs #:allow-other-keys)
(let ((doc (string-append
(assoc-ref outputs "doc")
"/share/doc/robotframework-sshlibrary")))
(invoke "chmod" "-R" "+w" "docs")
(invoke "invoke" "kw-docs" "project-docs")
(mkdir-p doc)
(for-each delete-file (find-files "docs" "\\.rst"))
(copy-recursively "docs" doc))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
;; Some tests require an SSH server; we remove them.
(delete-file "utest/test_client_api.py")
(delete-file "utest/test_scp.py")
(invoke "python" "utest/run.py")))))))
(propagated-inputs
(list python-robotframework python-paramiko python-scp))
(native-inputs
(list openssh
which
;; To generate the documentation
python-docutils
python-invoke
python-pygments
python-rellu))
(outputs '("out" "doc"))
(home-page "https://github.com/robotframework/SSHLibrary")
(synopsis "Robot Framework library for SSH and SFTP")
(description "SSHLibrary is a Robot Framework library providing support
for SSH and SFTP. It has the following main usages:
@itemize @bullet
@item Executing commands on the remote machine, either blocking or non-blocking.
@item Writing and reading in an interactive shell.
@item Transferring files and directories over SFTP.
@item Ensuring that files and directories exist on the remote machine.
@end itemize")
(license license:asl2.0)))
(define-public python-robotframework-pythonlibcore
(package
(name "python-robotframework-pythonlibcore")
(version "3.0.0")
(source
(origin
(method git-fetch) ;no tests in pypi archive
(uri (git-reference
(url "https://github.com/robotframework/PythonLibCore")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0v89v8va65l6inh0fb34qgxawx6p29pnrmw4n5941yzdi3804rc4"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "utest/run.py")))))))
(native-inputs
(list python-pytest python-pytest-cov python-pytest-mockito
python-robotframework))
(home-page "https://github.com/robotframework/PythonLibCore")
(synopsis "Robot Framework Python library tools")
(description "PythonLibCore provides tools for creating larger test
libraries for Robot Framework using Python. The Robot Framework hybrid and
dynamic library APIs give more flexibility for library than the static library
API, but they also set requirements for libraries which need to be implemented
in the library side. PythonLibCore eases the problem by providing a simpler
interface and by handling all the requirements towards the Robot Framework
library APIs.")
(license license:asl2.0)))
(define-public python-robotframework-seleniumlibrary
(package
(name "python-robotframework-seleniumlibrary")
(version "5.1.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "robotframework-seleniumlibrary" version))
(sha256
(base32 "1dihrbcid9i7daw2qy6h3xsvwaxzmyip820jw5z11n60qrl006pm"))))
(build-system python-build-system)
;; XXX: Tests require ungoogled-chromium, but the chromium module would
;; introduce a cycle if imported here.
(propagated-inputs
(list python-robotframework python-robotframework-pythonlibcore
python-selenium))
(home-page "https://github.com/robotframework/SeleniumLibrary")
(synopsis "Web testing library for Robot Framework")
(description "SeleniumLibrary is a web testing library for Robot Framework
that utilizes the Selenium tool internally.")
(license license:asl2.0)))
(define-public python-robotframework-seleniumscreenshots
(package
(name "python-robotframework-seleniumscreenshots")
(version "0.9.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "robotframework-seleniumscreenshots" version))
(sha256
(base32 "05qv323hvjmy62h33ryrjaa9k1hyvp8hq5qnj8j1x3ap2ci3q3s0"))))
(build-system python-build-system)
(arguments
;; XXX: The tests require a relatively complicated setup configured in
;; their CI with Nix (!).
`(#:tests? #f))
(propagated-inputs
(list python-robotframework python-robotframework-seleniumlibrary))
(home-page "https://github.com/MarketSquare/robotframework-seleniumscreenshots")
(synopsis "Robot Framework library for annotating and cropping screenshots")
(description "The SeleniumScreenshots library for Robot Framework provides
keywords for annotating and cropping screenshots taken with SeleniumLibrary.
It is useful for scripting automatically updated screenshots for documentation
or for visual regression testing purposes.")
(license license:bsd-3)))
(define-public python-rstr
(package
(name "python-rstr")
(version "2.2.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "rstr" version))
(sha256
(base32
"197dw8mbq0pjjz1l6h1ksi62vgn7x55d373ch74y06744qiq5sjx"))))
(build-system python-build-system)
(home-page "https://github.com/leapfrogonline/rstr")
(synopsis "Generate random strings in Python")
(description "This package provides a python module for generating
random strings of various types. It could be useful for fuzz testing,
generating dummy data, or other applications. It has no dependencies
outside the standard library.")
(license license:bsd-3)))
(define-public python-scp
(package
(name "python-scp")
(version "0.13.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "scp" version))
(sha256
(base32 "1m2v09m407p097cy3xy5rxicqfzrqjwf8v5rd4qhfqkk7lllimwb"))))
(build-system python-build-system)
(arguments
'(#:tests? #f)) ;tests require an SSH server
(propagated-inputs
(list python-paramiko))
(home-page "https://github.com/jbardin/scp.py")
(synopsis "SCP protocol module for Python and Paramiko")
(description "The scp module extends the Paramiko library to send and
receive files via the SCP1 protocol, as implemented by the OpenSSH
@command{scp} program.")
(license license:gpl2+)))
(define-public python-rst.linker
(package
(name "python-rst.linker")
(version "1.11")
(source
(origin
(method url-fetch)
(uri (pypi-uri "rst.linker" version))
(sha256
(base32 "0pqsfqqx8h0pq21k8l3k62kznrgaj2ala93c64s4d9rpbr4mgkd2"))))
(build-system python-build-system)
(propagated-inputs
(list python-dateutil python-six))
(native-inputs
(list python-setuptools-scm))
;; Test would require path.py, which would introduce a cyclic dependence.
(arguments `(#:tests? #f))
;; Note: As of version 1.7 the documentation is not worth building.
(home-page "https://github.com/jaraco/rst.linker")
(synopsis "Sphinx plugin to add links and timestamps")
(description "rst.linker automatically replaces text by a
reStructuredText external reference or timestamps. It's primary purpose is to
augment the changelog, but it can be used for other documents, too.")
(license license:expat)))
(define-public python-sshpubkeys
(package
(name "python-sshpubkeys")
(version "3.1.0")
(home-page "https://github.com/ojarva/python-sshpubkeys")
(source (origin
(method git-fetch)
(uri (git-reference
(url home-page)
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1h4gwmcfn84kkqh83km1vfz8sc5kr2g4gzgzmr8gz704jmqiv7nq"))))
(build-system python-build-system)
(propagated-inputs
(list python-cryptography python-ecdsa))
(synopsis "OpenSSH public key parser")
(description
"This package provides a library for parsing and validating OpenSSH
public key files.")
(license license:bsd-3)))
(define-public python-feedgenerator
(package
(name "python-feedgenerator")
(version "1.9")
(source
(origin
(method url-fetch)
(uri (pypi-uri "feedgenerator" version))
(sha256
(base32
"01mirwkm7xfx539hmvj7g9da1j51gw5lsx74dr0glizskjm5vq2s"))
(modules '((guix build utils)))
(snippet
'(begin
;; Remove pre-compiled .pyc files from source.
(for-each delete-file-recursively
(find-files "." "__pycache__" #:directories? #t))
(for-each delete-file (find-files "." "\\.pyc$"))
#t))))
(build-system python-build-system)
(propagated-inputs
(list python-pytz python-six))
(home-page "https://github.com/getpelican/feedgenerator")
(synopsis
"Standalone version of Django's Atom/RSS feed generator")
(description
"Feedgenerator-py3k is a standalone version of Django's feedgenerator,
which can produce feeds in RSS 2.0, RSS 0.91, and Atom formats.")
(license license:bsd-3)))
(define-public python-lsp-jsonrpc
(package
(name "python-lsp-jsonrpc")
(version "1.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "python-lsp-jsonrpc" version))
(sha256
(base32
"1gb0fsamxndhplx25v8m0b3k7aknzy454fpa0qsqsqnv6c3igv3v"))))
(build-system python-build-system)
(native-inputs
(list python-mock python-pytest))
(propagated-inputs
(list python-ujson))
(home-page "https://github.com/python-lsp/python-lsp-jsonrpc")
(synopsis "JSON RPC 2.0 server library")
(description
"This package provides a JSON RPC 2.0 server library for Python.")
(license license:expat)))
(define-public python-jsonrpc-server
(deprecated-package "python-jsonrpc-server" python-lsp-jsonrpc))
(define-public python-pydantic
(package
(name "python-pydantic")
(version "1.9.1")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/samuelcolvin/pydantic")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1406kgppqa7524mxllsipj7gb8fn7pwf51l11lqik59xjhsfv94f"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _ (invoke "pytest" "-vv"))))))
(native-inputs
(list python-pytest python-pytest-mock))
(propagated-inputs
(list python-typing-extensions))
(home-page "https://github.com/samuelcolvin/pydantic")
(synopsis "Python data validation and settings management")
(description
"Pydantic enforces type hints at runtime, and provides user friendly
errors when data is invalid.")
(license license:expat)))
(define-public python-pydantic-2
(package
(inherit python-pydantic)
(name "python-pydantic")
(version "2.5.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pydantic" version))
(sha256
(base32 "0yiz75zp93x6x2czm772cz5pzn00i703irncjwb99c1m4p35gvxk"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags #~(list "--ignore=tests/test_docs.py" ; no pytest_examples
;; These tests include hashes that keep changing depending on
;; package versions.
"--ignore=tests/benchmarks/test_north_star.py"
;; need python-email-validator >= 2.0.0
"-k not test_fastapi_startup_perf")
#:phases
#~(modify-phases %standard-phases
(add-before 'check 'pre-check
(lambda _
;; Remove the addopts from pyproject.toml, it breaks the 'check phase.
(substitute* "pyproject.toml"
(("'--benchmark") "#'--benchmark")))))))
(native-inputs
(list python-hatchling
python-hatch-fancy-pypi-readme
python-cloudpickle
python-dirty-equals
python-faker
python-pytest
python-pytest-benchmark
python-pytest-mock))
(propagated-inputs
(list python-annotated-types
python-pydantic-core
python-typing-extensions))))
(define-public python-pydantic-core
(package
(name "python-pydantic-core")
(version "2.14.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pydantic_core" version))
(sha256
(base32 "0j79pd6ixapsiwsigsxzmvbrpmdr7f7c4l9sl7xl6a1pjp9w3l0z"))))
(build-system cargo-build-system)
(arguments
(list
#:imported-modules `(,@%cargo-build-system-modules
,@%pyproject-build-system-modules)
#:modules '((guix build cargo-build-system)
((guix build pyproject-build-system) #:prefix py:)
(guix build utils))
#:phases
#~(modify-phases %standard-phases
(add-after 'build 'build-python-module
(assoc-ref py:%standard-phases 'build))
(add-after 'build-python-module 'install-python-module
(assoc-ref py:%standard-phases 'install)))
#:cargo-inputs
`(("rust-ahash" ,rust-ahash-0.8)
("rust-base64" ,rust-base64-0.21)
("rust-enum-dispatch" ,rust-enum-dispatch-0.3)
("rust-idna" ,rust-idna-0.4)
("rust-jiter" ,rust-jiter-0.0.4)
("rust-num-bigint" ,rust-num-bigint-0.4)
("rust-python3-dll-a" ,rust-python3-dll-a-0.2)
("rust-pyo3" ,rust-pyo3-0.20)
("rust-pyo3-build-config" ,rust-pyo3-build-config-0.20)
("rust-regex" ,rust-regex-1)
("rust-strum" ,rust-strum-0.25)
("rust-strum-macros" ,rust-strum-macros-0.25)
("rust-serde" ,rust-serde-1)
("rust-serde-json" ,rust-serde-json-1)
("rust-smallvec" ,rust-smallvec-1)
("rust-speedate" ,rust-speedate-0.13)
("rust-url" ,rust-url-2)
("rust-uuid" ,rust-uuid-1)
("rust-version-check" ,rust-version-check-0.9))
#:cargo-development-inputs
`(("rust-pyo3" ,rust-pyo3-0.20))
#:install-source? #false))
(native-inputs
(list maturin python-wrapper))
(propagated-inputs
(list python-typing-extensions))
(home-page "https://github.com/pydantic/pydantic-core")
(synopsis "Core validation logic for pydantic")
(description "This package provides the core functionality for pydantic
validation and serialization.")
(license license:expat)))
(define-public python-pydantic-cli
(package
(name "python-pydantic-cli")
(version "4.3.0")
(source
(origin
(method git-fetch) ;for tests
(uri (git-reference
(url "https://github.com/mpkocher/pydantic-cli")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1v4dx6n60rbsan5zpw2rgdih7lb3h0xclagn1p6zfwl0r9l9cvym"))))
(build-system python-build-system)
(propagated-inputs
(list python-pydantic))
(native-inputs
(list python-black
python-mypy
python-pytest))
(home-page "https://github.com/mpkocher/pydantic-cli")
(synopsis "Turn Pydantic defined data models into CLI tools")
(description
"@code{python-pydantic} enables specifying @acronym{CLI, Command Line
Interfaces} via data models provided in the JSON format.")
(license license:expat)))
(define-public python-pydantic-settings
(package
(name "python-pydantic-settings")
(version "2.2.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pydantic_settings" version))
(sha256
(base32 "1vf58f398ngk6wpf0jn51ghw65mjs3m03yn06h25jlsmx6jzdf80"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
#~(list "-k" (string-append
;; Disable tests requiring python-ruff.
"not test_docs_examples[docs/index.md:24-83]"
" and not test_docs_examples[docs/index.md:113-137]"
" and not test_docs_examples[docs/index.md:148-156]"
" and not test_docs_examples[docs/index.md:173-183]"
" and not test_docs_examples[docs/index.md:193-201]"
" and not test_docs_examples[docs/index.md:212-243]"
" and not test_docs_examples[docs/index.md:286-317]"
" and not test_docs_examples[docs/index.md:331-372]"
" and not test_docs_examples[docs/index.md:430-439]"
" and not test_docs_examples[docs/index.md:453-459]"
" and not test_docs_examples[docs/index.md:514-522]"
" and not test_docs_examples[docs/index.md:547-549]"
" and not test_docs_examples[docs/index.md:553-585]"
" and not test_docs_examples[docs/index.md:620-645]"
" and not test_docs_examples[docs/index.md:654-732]"
" and not test_docs_examples[docs/index.md:738-772]"))
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'relax-requirements
(lambda _
(substitute* "pyproject.toml"
;; hatchling.build failed on this line with error:
;; ValueError: Unknown classifier in field
;; `project.classifiers`: Framework :: Pydantic :: 2
(("'Framework :: Pydantic :: 2',") "")
;; python-dotenv>=0.21.0
((">=0.21.0") ">=0.20.0"))))
(add-before 'check 'set-home
(lambda _
;; FileNotFoundError: [Errno 2] No such file or directory:
;; '/homeless-shelter/
(setenv "HOME" "/tmp"))))))
(propagated-inputs
(list python-dotenv
python-pydantic-2
python-pyaml
python-tomli))
(native-inputs
(list python-hatchling
python-pytest
python-pytest-examples
python-pytest-mock))
(home-page "https://docs.pydantic.dev/latest/usage/pydantic_settings/")
(synopsis "Settings management using Pydantic")
(description
"Pydantic Settings provides optional Pydantic features for loading a
settings or config class from environment variables or secrets files.")
(license license:expat)))
(define-public python-pydoc-markdown
(package
(name "python-pydoc-markdown")
(version "4.8.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pydoc_markdown" version))
(sha256
(base32 "02vzlrd18r8wi0b64vq2gnbhaadysg9rnbylf9sf2v9q65z94v7v"))))
(build-system pyproject-build-system)
(arguments
(list
#:tests? #false ;there are none
#:phases
'(modify-phases %standard-phases
;; This is probably not a good idea, but it wants a rather old
;; version of docstring-parser.
(add-after 'unpack 'relax-requirements
(lambda _
(substitute* "pyproject.toml"
(("docstring-parser = .*")
"docstring-parser = \"^0\"\n")))))))
(propagated-inputs (list python-click
python-databind-core
python-databind-json
python-docspec
python-docspec-python
python-docstring-parser
python-jinja2
python-nr-util
python-pyyaml
python-requests
python-tomli
python-tomli-w
python-watchdog
python-yapf))
(native-inputs (list python-poetry-core))
(home-page "https://pypi.org/project/pydoc-markdown/")
(synopsis "Create Python API documentation in Markdown format")
(description "Pydoc-Markdown is a tool to create Python API documentation
in Markdown format. Instead of executing your Python code like so many other
documentation tools, it parses it using docspec instead.")
(license license:expat)))
(define-public python-pydocstyle
(package
(name "python-pydocstyle")
(version "3.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pydocstyle" version))
(sha256
(base32
"1m1xv9clkg9lgzyza6dnj359z04vh5g0h49nhzghv7lg81gchhap"))))
(build-system python-build-system)
(propagated-inputs
(list python-six python-snowballstemmer))
(home-page
"https://github.com/PyCQA/pydocstyle/")
(synopsis "Python docstring style checker")
(description
"This package provides a style checker for the Python Language
Server (PLS).")
(license license:expat)))
(define-public python-lsp-server
(package
(name "python-lsp-server")
(version "1.3.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "python-lsp-server" version))
(sha256
(base32
"0h6wxzmm6qjfwkkn3mnzn1fpmcp23fpbk74bi8p540q1nzccqj0v"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'check 'set-HOME
(lambda _ (setenv "HOME" "/tmp")))
(replace 'check
(lambda _
;; Disable failing test.
(invoke "python" "-m" "pytest" "-k"
"not test_pyqt_completion"))))))
(propagated-inputs
(list python-autopep8
python-pydocstyle
python-flake8
python-future
python-jedi
python-lsp-jsonrpc
python-pluggy
python-pycodestyle
python-pyflakes
python-rope
python-ujson
python-yapf))
(native-inputs
(list python-coverage
python-flaky
python-matplotlib
python-mock
python-numpy
python-pandas
python-pylint
python-pytest
python-pytest-cov
python-versioneer))
(home-page "https://github.com/python-lsp/python-lsp-server")
(synopsis "Python implementation of the Language Server Protocol")
(description
"The Python Language Server @command{pylsp} is an implementation of the
Python 3 language specification for the Language Server Protocol (LSP).
This tool is used in text editing environments to provide a complete
and integrated feature-set for programming Python effectively.")
(license license:expat)))
(define-public python-language-server
(deprecated-package "python-language-server" python-lsp-server))
(define-public python-black
(package
(name "python-black")
(version "22.3.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "black" version))
(sha256
(base32
"0yfahlqc7dsdp1js0cbv706apldnfnlbal9b53cww8n0hs40n0im"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'patch-source-shebangs 'use-absolute-file-names
(lambda* (#:key native-inputs inputs #:allow-other-keys)
(let* ((inpts (or native-inputs inputs))
(python3 (search-input-file inpts "/bin/python3")))
(substitute* (find-files "tests" "\\.py$")
(("#!/usr/bin/env python3(\\.[0-9]+)?" _ minor-version)
(string-append "#!" python3 (if (string? minor-version)
minor-version
"")))))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests? (invoke "pytest" "-vv")))))))
(propagated-inputs
(list python-click
python-attrs
python-appdirs
python-pathspec
python-mypy-extensions
python-platformdirs
python-regex
python-tomli
python-typed-ast
python-typing-extensions))
(native-inputs
(list python-pytest python-pytest-aiohttp python-setuptools-scm))
(home-page "https://github.com/psf/black")
(synopsis "The uncompromising code formatter")
(description "Black is the uncompromising Python code formatter.")
(license license:expat)))
(define-public python-black-macchiato
(package
(name "python-black-macchiato")
(version "1.3.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "black-macchiato" version))
(sha256
(base32
"1drp5p697ni1xn5y2lbjpalgpkzy2i4cyxjj5pk4dxr0vk97dd7i"))))
(build-system python-build-system)
(propagated-inputs
(list python-black))
(home-page "https://github.com/wbolster/black-macchiato")
(synopsis "Partial @code{python-black} formatting")
(description
"This package is built on top the @{python-black} code formatter to
enable formatting of partial files.")
(license license:bsd-3)))
(define-public python-blinker
(package
(name "python-blinker")
(version "1.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "blinker" version))
(sha256
(base32
"1dpq0vb01p36jjwbhhd08ylvrnyvcc82yxx3mwjx6awrycjyw6j7"))))
(build-system python-build-system)
(home-page "https://pythonhosted.org/blinker/")
(synopsis "Fast, simple object-to-object and broadcast signaling")
(description
"Blinker provides a fast dispatching system that allows any number of
interested parties to subscribe to events, or \"signals\".")
(license license:expat)))
(define-public pelican
(package
(name "pelican")
(version "4.7.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pelican" version))
(sha256
(base32 "0m1kndc98hhnlq0yl05f4lzccw555pkxnrajj6lks18yh491kw8w"))))
(build-system python-build-system)
(inputs
(list python-blinker
python-dateutil
;; Ignoring `guix lint` warning as python-docutils is used to support
;; reStructuredText processing at runtime.
python-docutils
python-feedgenerator
python-jinja2
python-markdown
python-pygments
python-pytz
python-rich
python-unidecode))
(home-page "https://blog.getpelican.com/")
(arguments
`(;; XXX Requires a lot more packages to do unit tests :P
#:tests? #f))
(synopsis "Python-based static site publishing system")
(description
"Pelican is a tool to generate a static blog from reStructuredText,
Markdown input files, and more. Pelican uses Jinja2 for templating
and is very extensible.")
(license license:agpl3+)))
(define-public mallard-ducktype
(package
(name "mallard-ducktype")
(version "1.0.2")
(source
(origin
(method git-fetch)
;; git-reference because tests are not included in pypi source tarball
;; https://issues.guix.gnu.org/issue/36755#2
(uri (git-reference
(url "https://github.com/projectmallard/mallard-ducktype")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"1jk9bfz7g04ip78s03b0xak6d54rj4h9zpgadkziy1ji216g6y4c"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(with-directory-excursion "tests"
(invoke "sh" "runtests")))))))
(home-page "http://projectmallard.org")
(synopsis "Convert Ducktype to Mallard documentation markup")
(description
"Ducktype is a lightweight syntax that can represent all the semantics
of the Mallard XML documentation system. Ducktype files can be converted to
Mallard using the @command{ducktype} tool. The yelp-tools package
provides additional functionality on the produced Mallard documents.")
(license license:expat)))
(define-public python-cython
(package
(name "python-cython")
(version "0.29.32")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Cython" version))
(sha256
(base32 "1xqsihpqnfal29nb5kmw8z71nd4jbsnbz7p3lkr094xpb13wycw7"))))
(build-system python-build-system)
;; we need the full python package and not just the python-wrapper
;; because we need libpython3.3m.so
(inputs
(list python))
(native-inputs
;; Needed for some tests that link against it.
(list libxcrypt))
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'check 'set-HOME
;; some tests require access to "$HOME/.cython"
(lambda _ (setenv "HOME" "/tmp")))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
;; Disable compiler optimizations to greatly reduce the running
;; time of the test suite.
(setenv "CFLAGS" "-O0")
(when tests?
(invoke "python" "runtests.py" "-vv"
"-j" (number->string (parallel-job-count))
;; XXX: On 32-bit architectures, running the parallel tests
;; fails on many-core systems, see
;; <https://github.com/cython/cython/issues/2807>.
,@(if (not (target-64bit?))
'("-x" "run.parallel")
'())
,@(if (system-hurd?)
'("-x" "test_class_ref"
"-x" "test_compiler_directives"
"-x" "test_lang_version")
'())
;; This test fails when running on 24 cores.
"-x" "cpp_stl_conversion")))))))
(home-page "https://cython.org/")
(synopsis "C extensions for Python")
(description "Cython is an optimising static compiler for both the Python
programming language and the extended Cython programming language. It makes
writing C extensions for Python as easy as Python itself.")
(license license:asl2.0)))
;; Needed for scipy
(define-public python-cython-0.29.35
(package
(inherit python-cython)
(name "python-cython")
(version "0.29.35")
(source (origin
(method url-fetch)
(uri (pypi-uri "Cython" version))
(sha256
(base32
"09y5r22nyswqpwc02agla1bnzh2jx2db25pnq9pc5cq8pyh1yf3f"))))
(properties '())))
(define-public python-cython-3
(package
(inherit python-cython)
;; Cython 3 is not officially released yet, so distinguish the name
;; for now.
(name "python-cython-next")
(version "3.0.8")
(source (origin
(method url-fetch)
(uri (pypi-uri "Cython" version))
(sha256
(base32
"1rlxscrn4bgdlbhjjikknbz5s2hyvn2rjfparry5wxnmiwyl4cw3"))))
(properties '())))
;; NOTE: when upgrading numpy please make sure that python-numba,
;; python-pandas and python-scipy still build, as these three packages are
;; often used together.
(define-public python-numpy
(package
(name "python-numpy")
(version "1.23.2")
(source
(origin
(method url-fetch)
(uri (string-append
"https://github.com/numpy/numpy/releases/download/v"
version "/numpy-" version ".tar.gz"))
(sha256
(base32
"00bx3idjwhmzkdawg2dx1bp0316ig37jfx0dm82bvyv1hbj013dp"))))
(build-system python-build-system)
(arguments
(list
#:modules '((guix build utils)
(guix build python-build-system)
(ice-9 format))
#:phases
#~(modify-phases %standard-phases
(add-before 'build 'parallelize-build
(lambda _
(setenv "NPY_NUM_BUILD_JOBS"
(number->string (parallel-job-count)))))
(add-before 'build 'configure-blas
(lambda* (#:key inputs #:allow-other-keys)
(call-with-output-file "site.cfg"
(lambda (port)
(format port
"\
[openblas]
libraries = openblas
library_dirs = ~a/lib
include_dirs = ~:*~a/include~%"
(dirname (dirname
(search-input-file
inputs "include/openblas_config.h"))))))))
(add-before 'build 'fix-executable-paths
(lambda* (#:key inputs #:allow-other-keys)
;; Make /gnu/store/...-bash-.../bin/sh the default shell,
;; instead of /bin/sh.
(substitute* "numpy/distutils/exec_command.py"
(("'/bin/sh'")
(format #f "~s" (search-input-file inputs "bin/bash"))))
;; Don't try to call '/bin/true' specifically.
(substitute* "numpy/core/tests/test_cpu_features.py"
(("/bin/true") (search-input-file inputs "bin/true")))))
(replace 'check
(lambda* (#:key tests? outputs inputs #:allow-other-keys)
(when tests?
(invoke "./runtests.py" "-vv" "--no-build" "--mode=fast"
"-j" (number->string (parallel-job-count))
;; Contrary to scipy, the runtests.py script of numpy
;; does *not* automatically provide -n when -j is used
;; (see: https://github.com/numpy/numpy/issues/21359).
"--" "-n" (number->string (parallel-job-count))
"-k" (string-append
;; These tests may fail on 32-bit systems (see:
;; https://github.com/numpy/numpy/issues/18387).
"not test_float_remainder_overflow "
"and not test_pareto "
;; The 'test_rint_big_int' test fails on older
;; x86_64 CPUs such as the Core 2 Duo (see:
;; https://github.com/numpy/numpy/issues/22170).
"and not test_rint_big_int "
;; The huge_array test is too large for 32-bit (see:
;; https://bugs.gentoo.org/843599 and
;; https://bugs.gentoo.org/846548).
;; TestKind.test_all is a Fortran type failure
;; that may be toolchain or environment related.
#$@(if (or (target-x86?) (target-arm32?))
`(" and not test_identityless_reduction_huge_array"
" and not (TestKind and test_all)")
'())
;; This test fails when building from aarch64-linux.
#$@(if (target-arm32?)
`(" and not test_features")
'())
;; These tests seem to fail on machines without
;; an FPU is still under investigation upstream.
;; https://github.com/numpy/numpy/issues/20635
#$@(if (target-riscv64?)
`(" and not test_float"
" and not test_fpclass")
'())))))))))
(native-inputs
(list python-cython
python-hypothesis
python-pytest
python-pytest-xdist
python-typing-extensions
gfortran))
(inputs (list bash openblas))
(home-page "https://numpy.org")
(synopsis "Fundamental package for scientific computing with Python")
(description "NumPy is the fundamental package for scientific computing
with Python. It contains among other things: a powerful N-dimensional array
object, sophisticated (broadcasting) functions, tools for integrating C/C++
and Fortran code, useful linear algebra, Fourier transform, and random number
capabilities.")
(properties
'((upstream-name . "numpy")))
(license license:bsd-3)))
(define-public python-numpy-documentation
(package
(inherit python-numpy)
(name "python-numpy-documentation")
(arguments
(list
#:tests? #f ;we're only generating the documentation
#:phases
#~(modify-phases %standard-phases
(add-before 'build 'add-gnu-freefont-to-texmf
(lambda _
;; XXX: The Sphinx-generated tex output specifies the GNU
;; FreeFont font to be searched via its extension, which uses
;; kpathsea instead of fontconfig and fail (see:
;; https://github.com/sphinx-doc/sphinx/issues/10347). Create a
;; symlink to GNU FreeFont and add it to the TEXMF tree via
;; GUIX_TEXMF.
(mkdir-p "texmf-dist/fonts/opentype/public")
(symlink (string-append
#$(this-package-native-input "font-gnu-freefont")
"/share/fonts/opentype")
(string-append
(getcwd) "/"
"texmf-dist/fonts/opentype/public/gnu-freefont"))
(setenv "GUIX_TEXMF" (string-append (getenv "GUIX_TEXMF") ":"
(getcwd) "/texmf-dist"))))
(delete 'build)
(replace 'install
(lambda _
(let* ((data (string-append #$output "/share"))
(doc (string-append data "/doc/numpy"))
(html (string-append doc "/html"))
(info (string-append data "/info"))
(sphinxopts (string-append
"SPHINXOPTS=-j"
(number->string (parallel-job-count)))))
(with-directory-excursion "doc"
;; Do not treat warnings as errors.
(substitute* "Makefile"
((" -WT ") " -T "))
(setenv "HOME" "/tmp")
;; Build the PDF documentation.
(invoke "make" "latex-build" sphinxopts)
(invoke "make" "-C" "build/latex" "all-pdf" sphinxopts)
;; Build the HTML documentation
(invoke "make" "html" sphinxopts)
;; Build the Info documentation. The issues worked around
;; below can be tracked at
;; https://github.com/numpy/numpy/issues/12278.
(substitute* "source/conf.py"
;; The root document should be "index", not "contents".
(("\"contents\"") "'index'")
;; Disable Sphinx extensions that produce broken Texinfo.
((".*'numpydoc'.*") "")
((".*'sphinx.ext.autosummary'.*") ""))
(invoke "make" "info" sphinxopts)
;; Install the HTML documentation.
(mkdir-p html)
(copy-recursively "build/html" html)
;; Install the PDF reference and user manuals.
(install-file "build/latex/numpy-ref.pdf" doc)
(install-file "build/latex/numpy-user.pdf" doc)
;; Install the info manual.
(install-file "build/texinfo/numpy.info" info)
(symlink (string-append html "/_images")
(string-append info "/numpy-figures")))))))))
(native-inputs
(list font-gnu-freefont
perl
python-breathe
python-ipython
python-matplotlib
python-numpy
python-numpydoc
python-pandas
python-pydata-sphinx-theme
python-scipy ;used by matplotlib
python-sphinx-4
python-sphinx-panels
texinfo
(texlive-updmap.cfg
(list texlive-cbfonts
texlive-cm-super
texlive-expdlist
texlive-greek-fontenc
texlive-latexmk
texlive-polyglossia
texlive-xetex
texlive-xindy))))
(inputs '())
(propagated-inputs '())
(synopsis "Documentation for the @code{python-numpy} package")
(description "This package provides the complete NumPy documentation in
the Texinfo, HTML, and PDF formats.")))
(define-public python-npx
(package
(name "python-npx")
(version "0.1.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "npx" version))
(sha256
(base32
"1m0v2p5mh3aqrypl4ipgzvr5nhx7bk5vv9ah2xr9l1xgj6nnmqnc"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-numpy))
(native-inputs (list python-flit-core python-networkx python-pytest))
(home-page "https://github.com/nschloe/npx")
(synopsis "Extensions for NumPy")
(description "NumPy is a large library used everywhere in scientific
computing. That's why breaking backwards-compatibility comes at a
significant cost and is almost always avoided, even if the API of some
methods is arguably lacking. This package provides drop-in wrappers
\"fixing\" those.")
(license license:bsd-3)))
(define-public python-munch
(package
(name "python-munch")
(version "2.5.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "munch" version))
(sha256
(base32
"1lnvlic9g68hcmgdnv5bzp0nx2bf1kjclj54gx0s7nyl4ipmywrd"))))
(build-system python-build-system)
(native-inputs (list python-pbr python-pytest))
(propagated-inputs (list python-six))
(home-page "https://github.com/Infinidat/munch")
(synopsis "Dot-accessible dictionary")
(description "Munch is a dot-accessible dictionary similar to JavaScript
objects.")
(license license:expat)))
(define-public python-colormath
(package
(name "python-colormath")
(version "3.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "colormath" version))
(sha256
(base32
"05qjycgxp3p2f9n6lmic68sxmsyvgnnlyl4z9w7dl9s56jphaiix"))))
(build-system python-build-system)
(propagated-inputs
(list python-networkx python-numpy))
(home-page "https://github.com/gtaylor/python-colormath")
(synopsis "Color math and conversion library")
(description
"This is a Python library for color math and conversions.")
(license license:bsd-3)))
(define-public python-sparse
(package
(name "python-sparse")
(version "0.14.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "sparse" version))
(sha256
(base32
"1600xad37mff46xg80cy6bi3l2n6jm69j7sl19rzdmkcgyijfn2z"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "python" "-m" "pytest" "-v")))))))
(propagated-inputs
(list python-numba python-numpy python-scipy))
(native-inputs
(list python-dask python-importlib-metadata python-pytest
python-pytest-black python-pytest-cov))
(home-page "https://github.com/pydata/sparse/")
(synopsis "Library for multi-dimensional sparse arrays")
(description
"This package implements sparse arrays of arbitrary dimension on top of
@code{numpy} and @code{scipy.sparse}. Sparse array is a matrix in which most
of the elements are zero. @code{python-sparse} generalizes the
@code{scipy.sparse.coo_matrix} and @code{scipy.sparse.dok_matrix} layouts, but
extends beyond just rows and columns to an arbitrary number of dimensions.
Additionally, this project maintains compatibility with the
@code{numpy.ndarray} interface rather than the @code{numpy.matrix} interface
used in @code{scipy.sparse}. These differences make this project useful in
certain situations where @code{scipy.sparse} matrices are not well suited, but
it should not be considered a full replacement. It lacks layouts that are not
easily generalized like @dfn{compressed sparse row/column}(CSR/CSC) and
depends on @code{scipy.sparse} for some computations.")
(license license:bsd-3)))
(define-public python-multiscale-spatial-image
(package
(name "python-multiscale-spatial-image")
(version "1.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "multiscale_spatial_image" version))
(sha256
(base32 "01kcagjy797hbz5an9cp8wcl5krgp21yb7ibfimvpidb3jp5lfhb"))))
(build-system pyproject-build-system)
;; All interesting tests require file downloads over IPFS.
(arguments (list #:tests? #false))
(propagated-inputs
(list `(,insight-toolkit "python")
python-dask
python-dask-image
python-numpy
python-spatial-image
python-xarray
python-xarray-datatree))
(native-inputs
(list python-fsspec
python-hatchling
python-ipfsspec
python-jsonschema
python-nbmake
python-pooch
python-pytest
python-pytest-mypy
python-urllib3
python-zarr))
(home-page "https://github.com/spatial-image/multiscale-spatial-image")
(synopsis "Multi-dimensional spatial image data structure")
(description
"This package lets you generate a multiscale, chunked, multi-dimensional
spatial image data structure that can serialized to OME-NGFF. Each scale is a
scientific Python Xarray spatial-image Dataset, organized into nodes of an
Xarray Datatree.")
(license license:asl2.0)))
(define-public python-spectra
(package
(name "python-spectra")
(version "0.0.11")
(source
(origin
(method url-fetch)
(uri (pypi-uri "spectra" version))
(sha256
(base32
"1f322x914bhkg6r5gv1vmnir3iy0k5kih0fd2gp3rdkw32jn5cwf"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _ (invoke "nosetests" "-v"))))))
(propagated-inputs
(list python-colormath))
(native-inputs
(list python-nose))
(home-page "https://github.com/jsvine/spectra")
(synopsis "Color scales and color conversion")
(description
"This package provides a Python library intended to make color math,
color scales, and color space conversion easy. It has support for:
@enumerate
@item Color scales
@item Color ranges
@item Color blending
@item Brightening/darkening colors
@item Saturating/desaturating colors
@item Conversion to/from multiple color spaces.
@end enumerate\n")
(license license:expat)))
(define-public python-pyspnego
(package
(name "python-pyspnego")
(version "0.8.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "pyspnego" version))
(sha256
(base32
"1ps34laa0kvvp33az173hp5l0hnk8cr0bfqmlgw64ry5cv09qjg0"))))
(build-system pyproject-build-system)
(native-inputs
(list python-pytest python-pytest-mock))
(propagated-inputs
(list python-cryptography python-gssapi python-krb5 python-ruamel.yaml))
(home-page "https://github.com/jborean93/pyspnego")
(synopsis "Python SPNEGO library")
(description "The @code{pyspnego} Python library handles Negotiate, NTLM,
Kerberos (SPNEGO) and CredSSP authentication. It also includes a packet
parser that can be used to decode raw NTLM/SPNEGO/Kerberos tokens into a human
readable format.")
(license license:expat)))
(define-public python-pygit2
(package
(name "python-pygit2")
(version "1.11.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pygit2" version))
(sha256
(base32 "1v34xdvh6i5cn5srwicvp0i2kvv8fzsv0v9p72ng081nsczmhgvr"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-cffi libgit2))
(native-inputs (list python-pytest))
(home-page "https://github.com/libgit2/pygit2")
(synopsis "Python bindings for libgit2")
(description "Pygit2 is a set of Python bindings to the libgit2 shared library.")
;; GPL2.0 only, with linking exception.
(license license:gpl2)))
(define-public python-patiencediff
(package
(name "python-patiencediff")
(version "0.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "patiencediff" version))
(sha256
(base32
"0yjk50lsd4gnllxls925xbcdxwvmda37w2a1shk0p1nvl3fcha6q"))))
(build-system python-build-system)
(home-page "https://www.breezy-vcs.org/")
(synopsis "Python implementation of the patiencediff algorithm")
(description
"This package contains a Python implementation of the @code{patiencediff}
algorithm. Patiencediff provides a good balance of performance, nice output for
humans, and implementation simplicity.")
(license license:gpl2)))
(define-public python-wmctrl
(package
(name "python-wmctrl")
(version "0.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "wmctrl" version))
(sha256
(base32
"1q0l1sqnj5wma87k3dsgmsyph464syjc6fl8qcpa41nan1rgzjv6"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(add-after 'unpack 'patch-paths
(lambda* (#:key inputs #:allow-other-keys)
(let ((wmctrl (assoc-ref inputs "wmctrl")))
(substitute* "wmctrl.py"
(("'wmctrl")
(string-append "'" wmctrl "/bin/wmctrl")))))))))
(inputs (list wmctrl))
(propagated-inputs (list python-attrs))
(home-page "https://github.com/antocuni/wmctrl")
(synopsis "Tool to programmatically control Xorg windows")
(description "This package provides a library for programmatically
controlling Xorg windows using Python. The library relies on the
@command{wmctrl} to do so.")
(license license:expat)))
(define-public python-fancycompleter
(package
(name "python-fancycompleter")
(version "0.9.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "fancycompleter" version))
(sha256
(base32 "0wkj4h01pxa8prv59zl09a0i3w26k835bfpjgvyvsai4mswgxq09"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(add-after 'unpack 'fix-setup.py
(lambda _
(substitute* "setup.py"
((".*setupmeta.*")
"")
(("versioning=.*")
(string-append "version='" ,version "',"))
((".*pyrepl.*") ;broken on Python 3
"")))))))
(home-page "https://github.com/pdbpp/fancycompleter")
(synopsis "TAB completion library for Python")
(description "@code{fancycompleter} is a module that adds TAB completion
to the interactive prompt. It is an extension of the @code{rlcompleter}
module from the standard Python library.")
(license license:bsd-3)))
(define-public python-ipdb
(package
(name "python-ipdb")
(version "0.13.9")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ipdb" version))
(sha256
(base32 "1ibql99agjf2gj7y0svzd5m0h81hailf4p3sj3yl9i1i8ykdj6wm"))))
(build-system python-build-system)
(arguments
(list #:phases #~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "python" "-m" "unittest" "discover")))))))
(propagated-inputs (list python-ipython python-toml python-decorator))
(home-page "https://github.com/gotcha/ipdb")
(synopsis "IPython-enhanced Python debugger (pdb)")
(description "@code{ipdb} exports functions to access the IPython
debugger, which features tab completion, syntax highlighting, better
tracebacks and better introspection than Python's standard @command{pdb}
debugger, with which it shares the same interface.")
(license license:bsd-3)))
(define-public python-ipfsspec
(package
(name "python-ipfsspec")
(version "0.4.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ipfsspec" version))
(sha256
(base32 "1y4ad9schc76j2lynm7vpwi4q4jzi9vv843zfpisbp8zqgm0rr7l"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
'(list "-m not local_gw"
;; Require local gateway
"--ignore=test/test_gateway.py"
;; Require internet
"--ignore=test/test_async.py"
"--ignore=test/test_ipfs.py")))
(propagated-inputs (list python-aiohttp python-fsspec python-requests))
(native-inputs (list python-pytest python-pytest-asyncio))
(home-page "https://github.com/fsspec/ipfsspec")
(synopsis "Read-only implementation of fsspec for IPFS")
(description "This package provides a read-only implementation of
@code{fsspec} for IPFS.")
(license license:expat)))
(define-public python-pdftotext
(package
(name "python-pdftotext")
(version "2.1.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pdftotext" version))
(sha256
(base32 "1555wbgr5spj8xflrs4mwsrdmba2f9s72nk50xzqk9ghxaxdvy6a"))))
(build-system python-build-system)
(inputs
(list poppler))
(home-page "https://github.com/jalan/pdftotext")
(synopsis "Simple PDF text extraction")
(description "Pdftotext is a Python library of PDF text extraction.")
(license license:expat)))
(define-public python-pluginbase
(package
(name "python-pluginbase")
(version "1.0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pluginbase" version))
(sha256
(base32
"11z2vvbp13828y0x3w39f29p9r9xcix7h7c4fff2w8yfiylk6v7z"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "make" "test")))))))
(native-inputs (list python-pytest))
(home-page "https://github.com/mitsuhiko/pluginbase")
(synopsis "Simple but flexible plugin system for Python")
(description "PluginBase is a library useful in the development of
flexible plugin systems in Python.")
(license license:bsd-3)))
(define-public python-node-semver
(package
(name "python-node-semver")
(version "0.8.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "node-semver" version))
(sha256
(base32
"000ypfns5x72b41w5f9pk6k3jnr35scliqfbvmilyvv0178005i8"))))
(build-system python-build-system)
(native-inputs
(list python-pytest))
(home-page "https://github.com/podhmo/python-node-semver")
(synopsis "Python port of node-semver")
(description "This module provides a Python version of node-semver, a
semantic version parser for Node.js.")
(license license:expat)))
(define-public python-norns
(package
(name "python-norns")
(version "0.1.6")
(source (origin
(method url-fetch)
(uri (pypi-uri "norns" version))
(sha256
(base32
"1r1lcq59v6l75wkbp7mypanr69a6fv6m58v6dw3v6b4vwz5nqg0z"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-appdirs python-nose python-pyyaml))
(home-page "https://github.com/simonvh/norns")
(synopsis "Simple YAML-based config module")
(description "This package provides a simple YAML-based config module.")
(license license:expat)))
(define-public python-patch-ng
(package
(name "python-patch-ng")
(version "1.17.4")
(source
(origin
(method git-fetch) ;no tests in PyPI archive
(uri (git-reference
(url "https://github.com/conan-io/python-patch-ng")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"0qxn4ss2s54qy87xrpcybz26kp2fwlaq41x4k9jcmp6d7p0w569m"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "tests/run_tests.py" "-v")))))))
(home-page "https://github.com/conan-io/python-patch-ng")
(synopsis "Python library to parse and apply unified diffs")
(description "Patch NG (New Generation) is a command and Python library to
parse and apply unified diffs. It has features such as:
@itemize
@item automatic correction of common patch formatting corruption
@item patch format detection (SVN, Hg, Git)
@item nice diffstat histogram.
@end itemize")
(license license:expat)))
(define-public python-numpydoc
(package
(name "python-numpydoc")
(version "1.5.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "numpydoc" version))
(sha256
(base32
"0k2z3g4s3w39h1nd293542hl9qv55j29gcr3bkia0rr3ldsppnxh"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-v" "numpydoc/tests"
;; TODO: unclear why these fail.
"-k" "not test_MyClass and not test_my_function")))))))
(propagated-inputs (list python-jinja2 python-sphinx))
(native-inputs (list python-matplotlib python-pytest python-pytest-cov))
(home-page "https://pypi.org/project/numpydoc/")
(synopsis "Numpy's Sphinx extensions")
(description "Sphinx extension to support docstrings in Numpy format.")
(license license:bsd-2)))
(define-public python-numexpr
(package
(name "python-numexpr")
(version "2.8.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "numexpr" version))
(sha256
(base32
"0iv1h1lvry5vmzqyvwxfbckyhzm1vbb1bmhmj4dnj64d84vjahym"))))
(build-system python-build-system)
(arguments `(#:tests? #f)) ; no tests included
(propagated-inputs
(list python-numpy))
(home-page "https://github.com/pydata/numexpr")
(synopsis "Fast numerical expression evaluator for NumPy")
(description
"Numexpr is a fast numerical expression evaluator for NumPy. With it,
expressions that operate on arrays are accelerated and use less memory than
doing the same calculation in Python. In addition, its multi-threaded
capabilities can make use of all your cores, which may accelerate
computations, most specially if they are not memory-bounded (e.g. those using
transcendental functions).")
(license license:expat)))
(define-public python-cycler
(package
(name "python-cycler")
(version "0.10.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "cycler" version))
(sha256
(base32
"1n69n23fak1gjxlrbhqisi2b9pv3ckrfj98llx3p53953082syyd"))))
(build-system python-build-system)
(arguments
;; XXX: The current version requires 'coveralls' which we don't have.
;; Enable this for the next release which uses 'python-pytest'.
'(#:tests? #f))
(propagated-inputs
(list python-six))
(home-page "https://matplotlib.org/cycler/")
(synopsis "Composable keyword argument iterator")
(description
"When using @code{matplotlib} and plotting more than one line, it is
common to want to be able to want to be able to cycle over one or more artist
styles; but the plotting logic can quickly become involved.
To address this and enable easy cycling over arbitrary @code{kwargs}, the
@code{Cycler} class was developed.")
(license license:bsd-3)))
(define-public python-colorspacious
(package
(name "python-colorspacious")
(version "1.1.2")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/njsmith/colorspacious")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0x7nkphr6g5ql5fvgss8l56rgiyjgh6fm8zzs73i94ci9wzlm63w"))))
(build-system python-build-system)
(propagated-inputs
(list python-numpy))
(native-inputs
(list python-nose))
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "nosetests" "--all-modules" "-v" "colorspacious"))))))
(home-page "https://github.com/njsmith/colorspacious")
(synopsis "Python library for colorspace conversions")
(description "@code{colorspacious} is a Python library that lets you
convert between colorspaces like sRGB, XYZ, CIEL*a*b*, CIECAM02, CAM02-UCS, etc.")
(license license:expat)))
(define-public python-proto-matcher
(package
(name "python-proto-matcher")
(version "0.0.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "proto_matcher" version))
(sha256
(base32 "1644x0hrl398ji3281n44ymfgc3cspzfagjckhqjn4nja5nlikxg"))))
(build-system python-build-system)
(arguments
`(#:tests? #f)) ;no test suite
(propagated-inputs
(list python-protobuf python-pyhamcrest))
(home-page "https://github.com/dayfine/proto-matcher")
(synopsis "PyHamcrest test matchers for protocol buffers")
(description "This package provides the following PyHamcrest test
matchers, that enable matching a protocol buffer message:
@table @code
@item equals_proto
Test the argument equals the given protobuf message.
@item approximately
Test the argument equals the given protobuf message, while comparing any float
field using approximation.
@item ignoring_field_paths
Test the argument equals the given protobuf message, while ignoring those
fields specified in the field paths.
@item ignoring_repeated_field_ordering
Test the argument equals the given protobuf message, ignoring the ordering of
any repeated field.
@item partially
Test the argument partially equals the given protobuf message, i.e. if a field
is in the argument but not in the expected message, it's ignored in the
comparison.
@end table")
(license license:asl2.0)))
(define-public python-matplotlib
(package
(name "python-matplotlib")
(version "3.8.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "matplotlib" version))
(sha256
(base32 "18amhxyxa6yzy1nwky4ggdgvvxnbl3qz2lki05vfx0dqf6w7ia81"))
(patches (search-patches "python-matplotlib-fix-legend-loc-best-test.patch"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
'(list "-m" "not network"
"-k"
(string-append
;; This one fails with a small difference in the upper left.
"not test_figure_legend_outside"
;; The 'test_lazy_auto_backend_selection' fails
;; because it would require an X server; skip it.
" and not test_lazy_auto_backend_selection"))
#:phases
#~(modify-phases %standard-phases
(add-before 'build 'pretend-version
;; The version string is usually derived via setuptools-scm, but
;; without the git metadata available, the version string is set to
;; '0.0.0'.
(lambda _
(setenv "SETUPTOOLS_SCM_PRETEND_VERSION" #$version)))
(add-after 'unpack 'fix-and-disable-failing-tests
;; XXX: Disable all image comparison tests because we're using a
;; newer version of FreeType than matplotlib expects. This leads
;; to minor differences throughout the tests.
(lambda _
(substitute* (append (find-files "lib/matplotlib/tests/"
"test_.*\\.py$")
(find-files "lib/mpl_toolkits/tests"
"test_.*\\.py$"))
(("^from matplotlib" match)
(string-append "import pytest\n" match))
(("( *)@([^_]+_)*(image_comparison|check_figures_equal)" match
indent)
(string-append indent "@pytest.mark.skip(\
reason=\"unknown minor image differences\")\n" match)))
(substitute* "lib/matplotlib/tests/test_animation.py"
(("/bin/sh") (which "sh")))
(for-each delete-file
;; test_normal_axes, test_get_tightbbox_polar
'("lib/matplotlib/tests/test_axes.py"
"lib/matplotlib/tests/test_polar.py"
;; We don't use the webagg backend and this test
;; forces it.
"lib/matplotlib/tests/test_backend_webagg.py"
;; test_outward_ticks
"lib/matplotlib/tests/test_tightlayout.py"
;; test_hidden_axes fails with minor extent
;; differences, possibly due to the use of a
;; different version of FreeType.
"lib/matplotlib/tests/test_constrainedlayout.py"
;; Fontconfig returns no fonts.
"lib/matplotlib/tests/test_font_manager.py"
;; The images comparison test fails
;; non-deterministically when run in parallel (see:
;; https://github.com/matplotlib/matplotlib/issues/22992).
"lib/matplotlib/tests/test_compare_images.py"))))
(add-before 'build 'configure-environment
(lambda* (#:key inputs #:allow-other-keys)
;; Fix rounding errors when using the x87 FPU.
(when (string-prefix? "i686" #$(%current-system))
(setenv "CFLAGS" "-ffloat-store"))
(call-with-output-file "mplsetup.cfg"
(lambda (port)
(format port "\
[libs]
system_freetype = true
system_qhull = true
[rc_options]
backend=Agg
[directories]
basedirlist = ~a,~a
[packages]
tests = True~%" #$(this-package-input "tcl") #$(this-package-input "tk"))))))
(replace 'check
(lambda* (#:key tests? test-flags #:allow-other-keys)
(when tests?
;; Step out of the source directory to avoid interference.
(with-directory-excursion "/tmp"
;; Run the installed tests, which is what we want since not
;; everything gets built in the source directory.
(apply invoke "pytest"
"-n" (number->string (parallel-job-count))
"--pyargs" "matplotlib"
test-flags))))))))
(propagated-inputs
(list python-contourpy
python-cycler
python-dateutil
python-fonttools-minimal
python-importlib-resources
python-kiwisolver
python-numpy
python-packaging
python-pillow
python-pyparsing
`(,python "tk")))
(inputs
(list cairo
freetype
glib
libpng
qhull
tcl
tk))
(native-inputs
(list pkg-config
pybind11
python-pytest
python-pytest-timeout
python-pytest-xdist
python-setuptools-scm
python-setuptools-scm-git-archive))
(home-page "https://matplotlib.org/")
(synopsis "2D plotting library for Python")
(description
"Matplotlib is a Python 2D plotting library which produces publication
quality figures in a variety of hardcopy formats and interactive environments
across platforms. Matplotlib can be used in Python scripts, the python and
ipython shell, web application servers, and six graphical user interface
toolkits.")
(license license:psfl)))
(define-public python-matplotlib-documentation
(package
(inherit python-matplotlib)
(name "python-matplotlib-documentation")
(arguments
(list
#:tests? #f ;we're only generating documentation
#:phases
#~(modify-phases %standard-phases
(replace 'build
(lambda _
(setenv "HOME" "/tmp")
(chdir "doc")
(substitute* "conf.py"
;; The sphinx_panels extension causes a "TypeError: first
;; argument must be callable" to be raised when generating the
;; info target; remove it (see:
;; https://github.com/executablebooks/sphinx-panels/issues/74).
((".*'sphinx_panels',.*") ""))
(invoke "make" "html" "info"
;; Don't abort on warnings; build in parallel.
(format #f "SPHINXOPTS=-j~a" (parallel-job-count)))))
(replace 'install
(lambda _
(let* ((data (string-append #$output "/share"))
(doc (string-append data "/doc/matplotlib"))
(info (string-append data "/info"))
(html (string-append doc "/html")))
(mkdir-p html)
(copy-recursively "build/html" html)
(install-file "build/texinfo/matplotlib.info" info)
;; The "matplotlib-figures" directory contains are a subset of
;; the images produced for the html target; simply create a
;; symlink to it, saving about 11 MiB.
(symlink (string-append html "/_images")
(string-append info "/matplotlib-figures"))))))))
(native-inputs
(list graphviz
inkscape/stable
python-colorspacious
python-ipython
python-ipywidgets
python-mpl-sphinx-theme
python-numpydoc
python-scipy
python-sphinx
python-sphinx-copybutton
python-sphinx-gallery
python-sphinxcontrib-svg2pdfconverter
texinfo
texlive-amsfonts
texlive-amsmath
texlive-babel
texlive-etoolbox
texlive-expdlist
texlive-fontspec
texlive-times
texlive-type1cm
texlive-underscore
texlive-unicode-math))
(synopsis "Documentation for the @code{python-matplotlib} package")))
(define-public python-matplotlib-inline
(package
(name "python-matplotlib-inline")
(version "0.1.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "matplotlib-inline" version))
(sha256
(base32 "1vilzwj3xp00mxprmmn1hlafm3p23vn56s46kx3ra4qd5signjx0"))))
(build-system python-build-system)
(propagated-inputs
(list python-matplotlib python-traitlets))
(arguments
;; Tests disabled because of a circular dependency with ipython.
`(#:tests? #f))
(home-page "https://github.com/ipython/matplotlib-inline")
(synopsis "Inline Matplotlib backend for Jupyter")
(description
"This package provides a Matplotlib inline back-end for IPython and
Jupyter.")
(license license:bsd-3)))
(define-public python-matplotlib-venn
(package
(name "python-matplotlib-venn")
(version "0.11.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "matplotlib-venn" version ".zip"))
(sha256
(base32
"13w3i1wih0mij08hrgppzg0g9z50y54rc28l6gdi1r5w45l7l0dy"))))
(build-system python-build-system)
(arguments '(#:tests? #f)) ; tests are not included
(propagated-inputs
(list python-matplotlib python-numpy python-scipy))
(native-inputs
(list unzip))
(home-page "https://github.com/konstantint/matplotlib-venn")
(synopsis "Plot area-proportional Venn diagrams")
(description
"This package provides tools for plotting area-proportional two- and
three-way Venn diagrams in @code{matplotlib}.")
(license license:expat)))
(define-public python-matplotx
(package
(name "python-matplotx")
(version "0.3.10")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/nschloe/matplotx")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1j301mr7ai2jmbm5mkva0jd99fzxhyq585pqzqfmrf5pil8j4q8i"))))
(build-system pyproject-build-system)
(propagated-inputs
(list python-matplotlib
python-numpy
;; optional dependencies
python-networkx
python-pypng
python-scipy))
(native-inputs (list python-imageio
python-meshzoo
python-pytest
python-scikit-fem))
(arguments
(list
#:test-flags
;; This test fails with ValueError: not enough values to unpack.
#~(list "--deselect" "tests/test_spy.py::test_cli"
;; XXX: unknown failure
"--deselect" "tests/test_spy.py::test_png")))
(home-page "https://github.com/nschloe/matplotx")
(synopsis "Minimal matplotlib styles")
(description
"This package includes some extensions for Matplotlib to create
clean plots with a minimalistic style.")
(license license:expat)))
(define-public python-cplot
(package
(name "python-cplot")
(version "0.9.3")
(source
(origin
(method git-fetch) ;for tests
(uri (git-reference
(url "https://github.com/nschloe/cplot")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0zk7hpq358sbympmkms7w2wjs7nw8mdfvkvdasblg2nhqayv42qz"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-matplotlib
python-matplotx
python-npx
python-numpy))
(native-inputs (list python-pytest))
(home-page "https://github.com/nschloe/cplot")
(synopsis "Plot complex-valued functions")
(description "@code{cplot} is a Python library for plotting
complex-valued functions.")
(license license:gpl3+)))
(define-public python-cppheaderparser
(package
(name "python-cppheaderparser")
(version "2.7.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "CppHeaderParser" version))
(sha256
(base32 "0hncwd9y5ayk8wa6bqhp551mcamcvh84h89ba3labc4mdm0k0arq"))))
(build-system pyproject-build-system)
(arguments
(list
#:tests? #f)) ; no tests
(propagated-inputs (list python-ply))
(home-page "http://senexcanis.com/open-source/cppheaderparser/")
(synopsis
"Parse C++ header files and generate a data structure representing the class")
(description
"CppHeaderParser is a pure python module that will parse C++ header files
and generate a data structure representing the class.")
(license license:bsd-3)))
(define-public python-cppy
(package
(name "python-cppy")
(version "1.2.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "cppy" version))
(sha256
(base32 "06zysv86j7wqb1rl88ab4clbjf7iahhv9gfyqlasr18hggqkpd43"))))
(build-system pyproject-build-system)
(home-page "https://github.com/nucleic/cppy")
(synopsis "C++ header library for Python extension modules")
(description "This package is a small C++ header library which makes it
easier to write Python extension modules. The primary feature is a
@code{PyObject} smart pointer which automatically handles reference counting
and provides convenience methods for performing common object operations.")
(license license:bsd-3)))
(define-public python-perfplot
(package
(name "python-perfplot")
(version "0.10.2")
(source (origin
(method url-fetch)
(uri (pypi-uri "perfplot" version))
(sha256
(base32
"0hbyv17f9ra6l6albcrqx4rylmfv2m6z4qsnhb4bar256dralvfp"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-matplotlib
python-matplotx
python-numpy
python-rich))
(native-inputs (list python-flit-core
python-pytest))
(home-page "https://github.com/nschloe/perfplot")
(synopsis "Performance plots for Python code snippets")
(description "@code{perfplot} extends Python's timeit by testing
snippets with input parameters (e.g., the size of an array) and plotting
the results.")
(license license:gpl3+)))
(define-public python-pysnptools
(package
(name "python-pysnptools")
(version "0.4.11")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pysnptools" version))
(sha256
(base32
"0gxr0bjix307wvk0qh7vkafbxbzfpdmq0wlswpxyyaymy0fwcypv"))))
(build-system python-build-system)
(arguments
`(#:tests? #f ; no test data are included
#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key inputs outputs tests? #:allow-other-keys)
(if tests?
(begin
(add-installed-pythonpath inputs outputs)
(invoke "python3" "pysnptools/test.py"))
#t))))))
(propagated-inputs
(list python-dill
python-h5py
python-numpy
python-pandas
python-psutil
python-scipy))
(native-inputs
(list python-cython))
(home-page "http://microsoftgenomics.github.io/PySnpTools/")
(synopsis "Library for reading and manipulating genetic data")
(description
"PySnpTools is a library for reading and manipulating genetic data. It
can, for example, efficiently read whole PLINK *.bed/bim/fam files or parts of
those files. It can also efficiently manipulate ranges of integers using set
operators such as union, intersection, and difference.")
(license license:asl2.0)))
(define-public python-pykdtree
(package
(name "python-pykdtree")
(version "1.3.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pykdtree" version))
(sha256
(base32 "0p8n2ljdacfixkiw092974dmhy4s1c0h032ii1z9kwi9h5h5rgmy"))))
(build-system python-build-system)
(native-inputs
(list python-nose))
(propagated-inputs
(list python-numpy))
(home-page "https://github.com/storpipfugl/pykdtree")
(synopsis "Fast kd-tree implementation with OpenMP-enabled queries")
(description
"@code{pykdtree} is a kd-tree implementation for fast nearest neighbour
search in Python.")
(license license:lgpl3+)))
(define-public python-wurlitzer
(package
(name "python-wurlitzer")
(version "2.0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "wurlitzer" version))
(sha256
(base32 "0hvmbc41kdwrjns8z1s4a59a4azdvzb8q3vs7nn1li4qm4l0g3yh"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "pytest" "-vv" "test.py"))))))
(native-inputs
(list python-mock python-pytest))
(home-page "https://github.com/minrk/wurlitzer")
(synopsis "Capture C-level output in context managers")
(description
"This library helps to redirect @code{sys.stdout} to a stream or a file
while executing some piece of code, including C code running within a Python
process.")
(license license:expat)))
(define-public python-socksipy-branch
(package
(name "python-socksipy-branch")
(version "1.01")
(source
(origin
(method url-fetch)
(uri (pypi-uri "SocksiPy-branch" version))
(sha256
(base32
"01l41v4g7fy9fzvinmjxy6zcbhgqaif8dhdqm4w90fwcw9h51a8p"))))
(build-system python-build-system)
(arguments
`(#:tests? #f)) ; There are no tests
(home-page "https://code.google.com/archive/p/socksipy-branch/")
(synopsis "Python SOCKS module")
(description
"SocksiPy - A Python SOCKS client module. It provides a
socket-like interface that supports connections to any TCP
service through the use of a SOCKS4, SOCKS5 or HTTP proxy.
The original version was developed by Dan Haim, this is a
branch created by Mario Vilas to address some open issues,
as the original project seems to have been abandoned circa 2007.")
(license license:bsd-3)))
(define-public python-socksipychain
(package
(name "python-socksipychain")
(version "2.1.2")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/pagekite/PySocksipyChain")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"02pp994qmiivkdx4y6az5q80l6rzy8g6d2ipvp7kns7lsxvmc2y7"))))
(build-system python-build-system)
(arguments
`(#:tests? #f)) ; Tests try to access the network.
(propagated-inputs
(list python-six))
(home-page "http://pagekite.net/wiki/Floss/PySocksipyChain/")
(synopsis "Python SOCKS module with chained proxies support")
(description
"SocksiPyChain is a modified version of the SocksiPy SOCKS module, which
adds support for arbitrary chaining of proxy servers and various modes of
TLS/SSL encryption. It was developed for use in PageKite, and also includes
a simple netcat replacement with chaining support.")
(license license:bsd-3)))
(define-public python-pycodestyle
(package
(name "python-pycodestyle")
(version "2.8.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pycodestyle" version))
(sha256
(base32
"0zxyrg8029lzjhima6l5nk6y0z6lm5wfp9qchz3s33j3xx3mipgd"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv")))))))
(native-inputs
(list python-pytest))
(home-page "https://pycodestyle.readthedocs.io/")
(synopsis "Python style guide checker")
(description "@code{pycodestyle} (formerly pep8) is a tool to check
Python code against some of the style conventions in
@url{http://www.python.org/dev/peps/pep-0008/,PEP 8}.")
(license license:expat)))
(define-public python-pyct
(package
(name "python-pyct")
(version "0.5.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pyct" version))
(sha256
(base32 "1856dbrcpc0nxxhlfh3dqzz7xxn5sdi600q45hsprqyqrg2lm7yx"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
;; These tests want to download example data from the internet.
'(list "-k" (string-append
"not test_examples_with_use_test_data"
" and not test_examples_using_test_data_and_force_with_prexisting_content_in_target"
" and not test_fetch_data_using_test_data_with_no_file_in_data_copies_from_stubs"
" and not test_fetch_data_using_test_data_and_force_with_file_in_data_over_writes"))))
(propagated-inputs (list python-param python-pyyaml))
(native-inputs (list python-flake8 python-pytest))
(home-page "https://github.com/holoviz-dev/pyct")
(synopsis "Common packaging tasks")
(description
"This Python package provides utilities to run common packaging tasks,
e.g. copy examples, fetch data, etc.")
(license license:bsd-3)))
(define-public python-multidict
(package
(name "python-multidict")
(version "5.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "multidict" version))
(sha256
(base32
"1kjrxav572j45xvr1iy60zb2g8zqvrinzdkl4ax36js4vczckl8d"))))
(build-system python-build-system)
(arguments
'(#:phases (modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(if tests?
(invoke "pytest" "-vv")
(format #t "test suite not run~%")))))))
(native-inputs
(list python-pytest python-pytest-cov))
(home-page "https://github.com/aio-libs/multidict/")
(synopsis "Multidict implementation")
(description "Multidict is dict-like collection of key-value pairs
where key might be occurred more than once in the container.")
(license license:asl2.0)))
(define-public python-orderedmultidict
(package
(name "python-orderedmultidict")
(version "1.0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "orderedmultidict" version))
(sha256
(base32
"1bc2v0yflsxjyyjx4q9wqx0j3bvzcw9z87d5pz4iqac7bsxhn1q4"))))
(build-system python-build-system)
(propagated-inputs
(list python-six))
(native-inputs
(list python-flake8 python-pycodestyle))
(home-page "https://github.com/gruns/orderedmultidict")
(synopsis "Python Ordered Multivalue Dictionary - omdict")
(description "This package contains a library for ordered multivalue
dictionaries. A multivalue dictionary is a dictionary that can store
multiple values for the same key. An ordered multivalue dictionary is a
multivalue dictionary that retains the order of insertions and deletions.")
(license license:unlicense)))
(define-public python-autocommand
(package
(name "python-autocommand")
(version "2.2.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "autocommand" version))
(sha256
(base32 "03qp9xx4dq81ljhf56r21gp5j0lpqs1vaw99g0d84i97s3lj1m7y"))))
(build-system python-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
;; This test fails with an invalid syntax error on 'task1 =
;; asyncio.async(coro_1())' (see:
;; https://github.com/Lucretiel/autocommand/issues/20).
(delete-file "test/test_autoasync.py")
(invoke "pytest" "-vv")))))))
(native-inputs (list python-pytest python-pytest-asyncio))
(home-page "https://github.com/Lucretiel/autocommand")
(synopsis "Python library to build a command-line from a function")
(description "@code{autocommand} is library to automatically generate and
run simple @code{argparse} parsers from function signatures.")
(license license:lgpl3+)))
(define-public python-autopage
(package
(name "python-autopage")
(version "0.5.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "autopage" version))
(sha256
(base32
"169ixll1ncm2a2pcc86665ikjv2lrzs10p6c1w4yj55p3gk3xgh1"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-before 'check 'disable-e2e-tests
(lambda _
;; These tests rely on KeyboardInterrupts which do not
;; work in the build container.
(delete-file "autopage/tests/test_end_to_end.py"))))))
(native-inputs
(list python-pypa-build
python-setuptools
python-wheel
;; For tests.
python-fixtures
python-pytest
python-testtools))
(home-page "https://github.com/zaneb/autopage")
(synopsis "Automatic paging for console output")
(description
"Autopage is a Python library to automatically display terminal output
from a program in a @dfn{pager} such as @command{less}.")
(license license:asl2.0)))
(define-public python-autopep8
(package
(name "python-autopep8")
(version "1.5.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "autopep8" version))
(sha256
(base32
"1w6vh627vrmgfbvrdcxrc3k4gxcldrb2lpgxv9irkdds851qrzb0"))))
(build-system python-build-system)
(propagated-inputs
(list python-pycodestyle python-toml))
(home-page "https://github.com/hhatto/autopep8")
(synopsis "Format Python code according to the PEP 8 style guide")
(description
"@code{autopep8} automatically formats Python code to conform to
the PEP 8 style guide. It uses the pycodestyle utility to determine
what parts of the code needs to be formatted. @code{autopep8} is
capable of fixing most of the formatting issues that can be reported
by pycodestyle.")
(license (license:non-copyleft
"https://github.com/hhatto/autopep8/blob/master/LICENSE"))))
(define-public python-dirty-equals
(package
(name "python-dirty-equals")
(version "0.7.0")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/samuelcolvin/dirty-equals")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1hw044d6q0ij8hrrbp6wbdb49xbyjd22viansy817hpmd0yf85ja"))))
(build-system pyproject-build-system)
(arguments
;; This test requires pytest-examples, which in turn requires
;; python-ruff, which is difficult to package because it is
;; written in Rust (TODO: Enable when Ruff is in Guix!).
(list #:test-flags #~'("--ignore" "tests/test_docs.py")))
(native-inputs
(list python-hatchling
python-pydantic
python-pytest))
(propagated-inputs (list python-pytz))
(home-page "https://dirty-equals.helpmanual.io/")
(synopsis "Do dirty (but useful) things with equals")
(description
"@code{dirty-equals} is a Python library that (mis)uses the
@code{__eq__} method to make code (generally unit tests) more declarative
and therefore easier to read and write.")
(license license:expat)))
(define-public python-distlib
(package
(name "python-distlib")
(version "0.3.7")
(source
(origin
(method url-fetch)
(uri (pypi-uri "distlib" version))
(sha256
(base32
"1a27f5p93j9i1l3324qgahs3g8ai91fmx783jpyyla506i5ybbwx"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-before 'build 'no-/bin/sh
(lambda* (#:key inputs #:allow-other-keys)
(let ((/bin/sh (search-input-file inputs "bin/sh")))
(substitute* '("distlib/scripts.py" "tests/test_scripts.py")
(("/bin/sh") /bin/sh)))))
(add-before 'check 'prepare-test-environment
(lambda _
(setenv "HOME" "/tmp")
;; NOTE: Any value works, the variable just has to be present.
(setenv "SKIP_ONLINE" "1"))))))
(native-inputs
(list python-pytest))
(inputs
(list bash-minimal))
(home-page "https://github.com/pypa/distlib")
(synopsis "Distribution utilities")
(description "Distlib is a library which implements low-level functions that
relate to packaging and distribution of Python software. It is intended to be
used as the basis for third-party packaging tools.")
(license license:psfl)))
(define-public python-distutils-extra
(package
(name "python-distutils-extra")
(version "2.38")
(source
(origin
(method url-fetch)
(uri (string-append "https://launchpad.net/python-distutils-extra/trunk/"
version "/+download/python-distutils-extra-"
version ".tar.gz"))
(sha256
(base32
"0lx15kcbby9zisx33p2h5hgakgwh2bvh0ibag8z0px4j6ifhs41x"))))
(build-system python-build-system)
(home-page "https://launchpad.net/python-distutils-extra/")
(synopsis "Enhancements to Python's distutils")
(description
"The python-distutils-extra module enables you to easily integrate
gettext support, themed icons, and scrollkeeper-based documentation into
Python's distutils.")
(license license:gpl2)))
(define-public python-olefile
(package
(name "python-olefile")
(version "0.46")
(source
(origin
(method url-fetch)
(uri (string-append "https://github.com/decalage2/olefile/releases/"
"download/v" version "/olefile-" version ".tar.gz"))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"1kjxh4gr651hpqkjfv89cfzr40hyvf3vjlda7mifiail83j7j07m"))))
(build-system python-build-system)
(home-page "https://www.decalage.info/python/olefileio")
(synopsis "Read and write Microsoft OLE2 files")
(description
"@code{olefile} can parse, read and write Microsoft OLE2 files (Structured
Storage or Compound Document, Microsoft Office). It is an improved version of
the OleFileIO module from PIL, the Python Image Library.")
(license license:bsd-3)))
(define-public python-property-cached
(package
(name "python-property-cached")
(version "1.6.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "property-cached" version ".zip"))
(sha256
(base32 "0wxv5sdx1p7ils36j6j6hfscz8v2vzbq212i8y8r0lrnxpqlx71y"))))
(build-system pyproject-build-system)
(arguments
(list
;; AssertionError.
#:test-flags #~(list "-k" "not test_threads_ttl_expiry")))
(native-inputs (list python-freezegun python-pytest unzip))
(home-page "https://github.com/althonos/property-cached/")
(synopsis "Decorator for caching properties in classes")
(description "This package provides a decorator for caching properties in
classes. It is forked from @code{cached-property}.")
(license license:bsd-3)))
(define-public python-pypdf3
(package
(name "python-pypdf3")
(version "1.0.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "PyPDF3" version))
(sha256
(base32 "018hlq9q2qa96vw4j7ppq352znykldwy98h2w9qcpkvpi93sjqhc"))))
(build-system python-build-system)
(propagated-inputs
(list python-tqdm))
(home-page "https://github.com/sfneal/PyPDF3")
(synopsis "Utility to read and write PDFs with Python")
(description "PyPDF3 is a pure-python PDF library capable of splitting,
merging together, cropping, and transforming the pages of PDF files. It can
also add custom data, viewing options, and passwords to PDF files. It can
retrieve text and metadata from PDFs as well as merge entire files together.")
(license license:bsd-3)))
(define-public python-pdf2image
(package
(name "python-pdf2image")
(version "1.17.0")
;; No tests in the PyPI tarball.
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/Belval/pdf2image")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0xd8q939zqa8flfcdhbgyadiwqb8sgnd42cbr6n1l2jl9fnix45v"))))
(build-system pyproject-build-system)
(arguments
;; The following excluded tests assume hardcoded binary paths to
;; /usr/bin/pdftoppm and /usr/bin/pdftocairo.
'(#:test-flags '("--exclude=^test_use_poppler_path$"
"--exclude=^test_use_poppler_path_with_trailing_slash$")))
(propagated-inputs (list python-pillow))
(inputs (list poppler))
(native-inputs (list python-nose which))
(home-page "https://github.com/Belval/pdf2image")
(synopsis
"Python wrapper around @command{pdftoppm} and @command{pdftocairo}")
(description
"This package provides a Python API wrapping the @command{pdftoppm} and
@command{pdftocairo} command line tools. It can convert @file{PDF} files to a
Python list with elements of type @code{PIL.Image} (from the
@code{python-pillow} library).")
(license license:expat)))
(define-public python-pikepdf
(package
(name "python-pikepdf")
(version "7.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pikepdf" version))
(sha256
(base32 "1vp3q85l2w7wpc8kqs26ijg3ivvvgj50z7g14p3pc0zdz8vbi0md"))))
(build-system python-build-system)
(arguments
`(#:tests? #false)) ;require python-xmp-toolkit
(native-inputs
(list pybind11
python-attrs
python-coverage
python-hypothesis
python-setuptools-scm
python-psutil
python-pytest
python-pytest-cov
python-pytest-timeout
python-pytest-xdist
python-dateutil
;; python-xmp-toolkit
python-tomli))
(inputs
(list qpdf))
(propagated-inputs
(list python-deprecation python-lxml python-packaging python-pillow))
(home-page "https://github.com/pikepdf/pikepdf")
(synopsis "Read and write PDFs with Python")
(description
"pikepdf is a Python library for reading and writing PDF files.")
(license license:mpl2.0)))
(define-public python-pillow
(package
(name "python-pillow")
(version "9.2.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "Pillow" version))
(sha256
(base32
"011wgm1mssjchpva9wsi2a07im9czyjvik137xlp5f0g7vykdrkm"))
(modules '((guix build utils)))
(snippet '(begin
(delete-file-recursively "src/thirdparty")))
(patches
(search-patches "python-pillow-CVE-2022-45199.patch"
;; Included in 10.1.0.
"python-pillow-use-zlib-1.3.patch"))))
(build-system python-build-system)
(native-inputs (list python-pytest))
(inputs (list freetype
lcms
libjpeg-turbo
libtiff
libwebp
openjpeg
zlib))
(propagated-inputs (list python-olefile))
(arguments
`(#:phases (modify-phases %standard-phases
(add-after 'unpack 'patch-ldconfig
(lambda _
(substitute* "setup.py"
(("\\['/sbin/ldconfig', '-p'\\]") "['true']"))))
(replace 'check
(lambda* (#:key outputs inputs tests? #:allow-other-keys)
(when tests?
(setenv "HOME"
(getcwd))
(add-installed-pythonpath inputs outputs)
(invoke "python" "selftest.py" "--installed")
(invoke "python" "-m" "pytest" "-vv")))))))
(home-page "https://python-pillow.org")
(synopsis "Fork of the Python Imaging Library")
(description
"The Python Imaging Library adds image processing capabilities to your
Python interpreter. This library provides extensive file format support, an
efficient internal representation, and fairly powerful image processing
capabilities. The core image library is designed for fast access to data
stored in a few basic pixel formats. It should provide a solid foundation for
a general image processing tool.")
(properties `((cpe-name . "pillow")))
(license (license:x11-style
"http://www.pythonware.com/products/pil/license.htm"
"The PIL Software License"))))
(define-public python-pillow-2.9
(package
(inherit python-pillow)
(version "2.9.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Pillow" version))
(sha256
(base32
"0ada7lf3lmbdsqm3b7ja920p1pllyfhmqndr85ikpj77fmz9s5qg"))))
(arguments
(substitute-keyword-arguments (package-arguments python-pillow)
((#:tests? _ #f) #f)))
(properties '((hidden? #t)))))
(define-public python-pillow-simd
(package
(inherit python-pillow)
(name "python-pillow-simd")
(version "9.2.0")
;; The PyPI tarball does not include test files.
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/uploadcare/pillow-simd")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "13wwq7slw2q9djh7n39qdmlrzd9k3x7hdr36wk8qbgp3b6bcgvj6"))))
(inputs
(modify-inputs (package-inputs python-pillow)
(prepend libraqm libimagequant)))
(home-page "https://github.com/uploadcare/pillow-simd")
(synopsis "Fork of the Python Imaging Library (Pillow)")
(description "This package is a fork of Pillow which adds support for SIMD
parallelism.")))
(define-public python-pixelmatch
(package
(name "python-pixelmatch")
(version "0.3.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pixelmatch" version))
(sha256
(base32 "16b0cz136dcmj4dbr505igpql8dmqmr9vni5nbaa5kygjfjkdynh"))))
(build-system python-build-system)
(native-inputs (list python-pillow))
(home-page "https://github.com/whtsky/pixelmatch-py")
(synopsis "A pixel-level image comparison library")
(description "This package provides a pixel-level image comparison library
for Python, originally created to compare screenshots in tests. Its features
include accurate anti-aliased pixels detection and perceptual color difference
metrics.")
(license license:isc)))
(define-public python-imagecodecs
(package
(name "python-imagecodecs")
(version "2021.3.31")
(source
(origin
(method url-fetch)
(uri (pypi-uri "imagecodecs" version))
(sha256
(base32
"0q7pslb6wd56vbcq2mdxwsiha32mxjr7mgqqfbq5w42q601p9pi0"))
(modules '((guix build utils)))
(snippet
'(begin
;; Unbundle 3rd party modules.
(delete-file-recursively "3rdparty")
;; Delete pre-generated Cython files.
(for-each delete-file (find-files "imagecodecs" "_.*\\.c$"))
#t))))
(build-system python-build-system)
(arguments
`(#:tests? #f ; Tests are disabled, because dependencies are missing.
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'create-configuration
(lambda* (#:key inputs #:allow-other-keys)
;; By default everything is enabled. We can selectively disable
;; extensions (and thus dependencies) by deleting them from the
;; EXTENSIONS dictionary. This is upstream’s preferred way.
(call-with-output-file "imagecodecs_distributor_setup.py"
(lambda (port)
(format port "\
def customize_build(EXTENSIONS, OPTIONS):
del EXTENSIONS['aec']
del EXTENSIONS['avif']
del EXTENSIONS['bitshuffle']
del EXTENSIONS['deflate']
del EXTENSIONS['jpeg2k']
del EXTENSIONS['jpeg12']
del EXTENSIONS['jpegls']
del EXTENSIONS['jpegxl']
del EXTENSIONS['jpegxr']
del EXTENSIONS['lerc']
del EXTENSIONS['ljpeg']
del EXTENSIONS['lzf']
del EXTENSIONS['zfp']
del EXTENSIONS['zopfli']
OPTIONS['cythonize']
")))))
;; XXX: The installed scripts import packages that depend on
;; this package; disable import check to avoid the cycle.
(delete 'sanity-check))))
(inputs
(list c-blosc
giflib
brotli
libjpeg-turbo
libpng
libtiff
libwebp
lz4
snappy
xz
zlib
`(,zstd "lib")))
(propagated-inputs
;; For the Python library.
(list python-numpy))
(native-inputs
;; For building.
(list python-cython
;; For testing. Incomplete.
;("python-numcodecs" ,python-numcodecs)
;("python-zarr" ,python-zarr)
;("python-pytest" ,python-pytest)
))
(home-page "https://www.lfd.uci.edu/~gohlke/")
(synopsis
"Image transformation, compression, and decompression codecs")
(description
"Imagecodecs is a Python library that provides block-oriented, in-memory
buffer transformation, compression, and decompression functions for use in the
tifffile, czifile, and other scientific image input/output modules.")
(license license:bsd-3)))
(define-public python-property-manager
(package
(name "python-property-manager")
(version "3.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "property-manager" version))
(sha256
(base32 "0m3w4spr8f39xnm65naw29ncal4r453kn7ndqb63rwbsmslnvrwk"))))
(build-system python-build-system)
(native-inputs
(list python-pytest-cov))
(propagated-inputs
(list python-verboselogs
python-humanfriendly
python-coloredlogs))
(home-page "https://github.com/xolox/python-property-manager")
(synopsis "Useful property variants for Python programming")
(description "The @code{property-manager} package defines several custom
property variants for Python programming including required properties,
writable properties, cached properties, etc.")
(license license:expat))) ; MIT license
(define-public python-executing
(package
(name "python-executing")
(version "0.8.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "executing" version))
(sha256
(base32 "08q0xh9fd8k41sqpp23q6fb9bf7yj4y2q6sv30pj36vvk8pg8fy2"))))
(build-system python-build-system)
(arguments
`(#:tests? #f)) ; TODO: tests require python-asttokens
(native-inputs
(list python-setuptools-scm python-toml))
(home-page "https://github.com/alexmojaki/executing")
(synopsis "Get information about what a Python frame is currently doing")
(description "This package lets you get information about what a frame is
currently doing, particularly the AST node being executed.")
(license license:expat)))
(define-public python-executor
(package
(name "python-executor")
(version "23.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "executor" version))
(sha256
(base32 "0g83yr54j0vcwhy6h7n0jsd7q0q630kwa6v9kqzlzrm9xj6c3ip1"))))
(build-system python-build-system)
(arguments
`(#:tests? #f)) ; TODO: tests require root/sudo
(propagated-inputs
(list python-six
python-property-manager
python-fasteners
python-virtualenv))
(home-page "https://github.com/xolox/python-executor")
(synopsis "Programmer friendly subprocess wrapper")
(description "The @code{executor} package is a simple wrapper for Python’s
subprocess module that makes it very easy to handle subprocesses on UNIX
systems with proper escaping of arguments and error checking currently doing,
particularly the AST node being executed.")
(license license:expat))) ; MIT license
(define-public python-roifile
(package
(name "python-roifile")
(version "2020.11.28")
(source
(origin
(method url-fetch)
(uri (pypi-uri "roifile" version))
(sha256
(base32
"04argnc7qccybkrj9ww18bf81ghsghhh93hnqy3p111rcdlyn66p"))))
(build-system python-build-system)
(arguments `(#:tests? #f)) ; there are none
(propagated-inputs
(list python-numpy))
(home-page "https://www.lfd.uci.edu/~gohlke/")
(synopsis "Read and write ImageJ ROI format")
(description "Roifile is a Python library to read, write, create, and plot
ImageJ ROIs, an undocumented and ImageJ application specific format to store
regions of interest, geometric shapes, paths, text, etc for image overlays.")
(license license:bsd-3)))
(define-public python-tifffile
(package
(name "python-tifffile")
(version "2023.12.9")
(source
(origin
(method url-fetch)
(uri (pypi-uri "tifffile" version))
(sha256
(base32
"1f6d8qdlq0zlksfdhp1mhj9icpwhw4cz47r4i80m6r0a328xmlcx"))))
(build-system python-build-system)
;; Tests require lfdfiles, which depends on tifffile
(arguments `(#:tests? #f))
(propagated-inputs
(list python-numpy))
(native-inputs
(list python-pytest))
(home-page "https://www.lfd.uci.edu/~gohlke/")
(synopsis "Read and write TIFF(r) files")
(description "This package lets you read image and metadata from many
bio-scientific formats such as plain TIFF, BigTIFF, OME-TIFF, STK, LSM, SGI,
NIH, ImageJ, MicroManager, MD GEL, and FluoView files. It also lets you write
numpy arrays to TIFF, BigTIFF, and ImageJ hyperstack compatible files.")
(license license:bsd-3)))
(define-public python-lfdfiles
(package
(name "python-lfdfiles")
(version "2021.2.22")
(source
(origin
(method url-fetch)
(uri (pypi-uri "lfdfiles" version))
(sha256
(base32
"12fxm4v805dgjrih7x6jnl1wd7y7jw1rkhjs3d4am8s6qk1cbar2"))
(modules '((guix build utils)))
(snippet
'(begin
;; Delete pre-generated Cython files.
(for-each delete-file (find-files "lfdfiles" "_.*\\.c$"))
#t))))
(build-system python-build-system)
(arguments
`(#:tests? #f)) ; No tests exist, despite a test dependency on pytest.
(propagated-inputs
(list python-click python-numpy python-tifffile))
(native-inputs (list python-cython))
(home-page "https://www.lfd.uci.edu/~gohlke/")
(synopsis "Work with LFD data files")
(description
"Lfdfiles is a Python library and console script for reading, writing,
converting, and viewing many of the proprietary file formats used to store
experimental data and metadata at the Laboratory for Fluorescence Dynamics.")
(license license:bsd-3)))
(define-public python-av
(package
(name "python-av")
(version "10.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "av" version))
(sha256
(base32 "01byqsjclkg65mhr6b4i2r2n4y7af9kdd2c35lxny27121b3vzca"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
#~(list
;; Tests require outbound access to download data samples from
;; http://fate.ffmpeg.org/fate-suite:
;;
;; E urllib.error.URLError: <urlopen error [Errno -3]
;; Temporary failure in name resolution>
;;
"--ignore=tests/test_doctests.py"
"--ignore=tests/test_timeout.py"
"-k"
(string-append
"not test_data"
" and not test_container_probing"
" and not test_stream_probing"
" and not test_transcode"
" and not test_codec_tag"
" and not test_parse"
" and not test_decode_audio_sample_count"
" and not test_decoded_motion_vectors"
" and not test_decoded_motion_vectors_no_flag"
" and not test_decoded_time_base"
" and not test_decoded_video_frame_count"
" and not test_encoding_aac"
" and not test_encoding_dnxhd"
" and not test_encoding_dvvideo"
" and not test_encoding_h264"
" and not test_encoding_mjpeg"
" and not test_encoding_mp2"
" and not test_encoding_mpeg1video"
" and not test_encoding_mpeg4"
" and not test_encoding_pcm_s24le"
" and not test_encoding_png"
" and not test_encoding_tiff"
" and not test_encoding_xvid"
" and not test_reading_from_buffer"
" and not test_reading_from_buffer_no_seek"
" and not test_reading_from_file"
" and not test_reading_from_pipe_readonly"
" and not test_reading_from_write_readonly"
" and not test_writing_to_custom_io_dash"
" and not test_writing_to_custom_io_image2"
" and not test_decode_half"
" and not test_seek_end"
" and not test_seek_float"
" and not test_seek_int64"
" and not test_seek_middle"
" and not test_seek_start"
" and not test_stream_seek"
" and not test_selection"
" and not test_stream_tuples"
" and not test_movtext"
" and not test_vobsub"
" and not test_roundtrip"
" and not test_stream_probing"))
#:phases
#~(modify-phases %standard-phases
(add-before 'check 'build-extensions
(lambda _
(invoke "python" "setup.py" "build_ext" "--inplace"))))))
(native-inputs
(list pkg-config
python-cython
python-editorconfig
python-numpy
python-pillow
python-pytest))
(inputs
;; XXX: Build is failing with FFmpeg 6.0, unresolved upstream.
;; See https://github.com/PyAV-Org/PyAV/issues/1106
(list ffmpeg-5))
(home-page "https://github.com/PyAV-Org/PyAV")
(synopsis "Pythonic bindings for FFmpeg's libraries")
(description
"PyAV is a Python library that allows for direct and precise manipulation
of media through containers, streams, packets, codecs, and frames. It provides
access to the powerful FFmpeg libraries while managing the complex details as
much as possible.
PyAV also facilitates data transformation and integration with
other packages such as Numpy and Pillow. However, working with media is a
challenging task and PyAV cannot abstract it away or make all the best decisions
for you. If you can accomplish your tasks with the ffmpeg command, PyAV may not
be necessary. Nonetheless, PyAV is an essential tool when working with media
that requires its specific capabilities.")
(license license:bsd-3)))
(define-public python-ffmpeg-python
;; The latest release (0.2.0) is old and its test suite crashs on Python 3.10.
(let ((commit "df129c7ba30aaa9ffffb81a48f53aa7253b0b4e6") (revision "0"))
(package
(name "python-ffmpeg-python")
(version (git-version "0.2.0" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/kkroening/ffmpeg-python.git")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"1zj4ac37n4igfj21zy405mdlvbpv6jyb12wfpszf8zkhhj2qby4c"))))
(build-system python-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'hardcode-ffmpeg
(lambda* (#:key inputs #:allow-other-keys)
(define ffmpeg (search-input-file inputs "bin/ffmpeg"))
(substitute* "ffmpeg/_run.py"
(("cmd='ffmpeg'")
(string-append "cmd='" ffmpeg "'")))
(substitute* "ffmpeg/tests/test_ffmpeg.py"
(("out_file.compile\\(\\) == \\['ffmpeg'")
(string-append "out_file.compile() == ['" ffmpeg "'")))))
;; Some tests fail with ffmpeg 5+
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv"
"-k" "not test_pipe and not test__probe")))))))
(inputs (list ffmpeg))
(propagated-inputs (list python-future))
(native-inputs (list python-future python-numpy python-pytest
python-pytest-mock python-pytest-runner))
(home-page "https://github.com/kkroening/ffmpeg-python")
(synopsis "Python bindings for FFmpeg with complex filtering support")
(description
"ffmpeg-python allows you to write FFmpeg filtergraphs in familiar
Python terms, taking care of running ffmpeg with the correct command-line
arguments. It handles arbitrarily large (directed-acyclic) signal graphs.")
(license license:asl2.0))))
(define-public python-imageio-ffmpeg
(package
(name "python-imageio-ffmpeg")
(version "0.4.8")
(source (origin
(method url-fetch)
(uri (pypi-uri "imageio-ffmpeg" version))
(sha256
(base32
"1a8as5c42s8yl79gc2nhj6vvkwr81p5ibxp5m1zhn1zy22nhbapx"))))
(arguments
(list #:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'hardcode-ffmpeg
(lambda* (#:key inputs #:allow-other-keys)
(substitute* "imageio_ffmpeg/_utils.py"
(("os\\.getenv\\(\"IMAGEIO_FFMPEG_EXE\".*\\)" all)
(string-append "(" all " or \""
(search-input-file inputs "bin/ffmpeg")
"\")"))))))))
(inputs (list ffmpeg-4))
(build-system python-build-system)
(home-page "https://github.com/imageio/imageio-ffmpeg")
(synopsis "FFMPEG wrapper for Python")
(description "This package provides an FFMPEG wrapper for working with video
files. It implements generator functions for reading and writing data to and
from FFMPEG, reliably terminating the process when done.")
(license license:bsd-2)))
(define-public python-imageio
(package
(name "python-imageio")
(version "2.33.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "imageio" version))
(sha256
(base32
"1kn1gj9vc1mkirs39x3nkw2d56paiagi24kkxksrig9pn502swkq"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags #~(list "-m" "not needs_internet")
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'fix-source
(lambda* (#:key inputs #:allow-other-keys)
(substitute* "imageio/plugins/_freeimage.py"
(("os\\.getenv\\(\"IMAGEIO_FREEIMAGE_LIB\".*\\)" all)
(string-append
"(" all " or \""
(search-input-file inputs "lib/libfreeimage.so")
"\")")))
(substitute* "imageio/core/util.py"
(("\"/var/tmp\"")
"os.getenv(\"TMPDIR\", \"/tmp\")"))))
(add-after 'unpack 'fix-failing-tests
(lambda _
(substitute* "tests/test_core.py"
(("(core\\.load_lib)\\((\\[gllib\\], \\[\\])\\)"
all fun args)
(string-append "raises(ValueError, " fun ", " args ")")))
(delete-file "tests/test_freeimage.py"))))))
(inputs (list freeimage))
(propagated-inputs
(list python-imageio-ffmpeg python-numpy python-pillow python-tifffile))
(native-inputs
(list python-black python-flake8 python-fsspec python-pytest
python-pytest-cov))
(home-page "https://imageio.github.io/")
(synopsis "Library for reading and writing a wide range of image data")
(description
"Imageio is a Python library that provides an easy interface to read and
write a wide range of image data, including animated images, video, volumetric
data, and scientific formats.")
(license license:bsd-2)))
(define-public python-pyvips
(package
(name "python-pyvips")
(version "2.2.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pyvips" version))
(sha256
(base32 "1dfbwwvnnsk4g2kj1pw654z9jq3mb72l1m8ma29858jpn12vn7dm"))))
(build-system python-build-system)
(arguments
(list #:phases
#~(modify-phases %standard-phases
;; Maybe switch to API mode (i.e., build the C extension)?
;; It is advertised as faster to start up and run.
;; However, even with ‘pkg-config’ and ‘python-pkgconfig’ in
;; ‘native-inputs’, the API mode build fails with:
;;
;; Falling back to ABI mode. Details: unable to find pkg-config package "vips"
;;
;; The build doesn't actually fail without the below
;; substitution, it's just slower because ‘setup.py’ tries
;; (unsuccessfully) to download the Python ‘pkgconfig’ module.
(add-after 'unpack 'fix-build
(lambda _
(substitute* "setup.py"
(("^( +setup_)API\\(\\)\n" _ prefix)
(string-append prefix "ABI()\n")))))
(add-after 'unpack 'fix-paths
(lambda _
(substitute* "pyvips/__init__.py"
(("^( +_vips_libname) = '(libvips.so.42)'"
_ var libname)
(format #f "~a = '~a/lib/~a'"
var #$(this-package-input "vips") libname))
(("^( +_gobject_libname) = '(libgobject-2.0.so.0)'"
_ var libname)
(format #f "~a = '~a/lib/~a'"
var #$(this-package-input "glib") libname)))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "python" "setup.py" "test")))))))
(native-inputs
(list python-pyperf
python-pytest
python-pytest-flake8
python-pytest-runner))
(inputs
(list glib vips))
(propagated-inputs
(list python-cffi))
(home-page "https://github.com/libvips/pyvips")
(synopsis "Python bindings for VIPS")
(description "The @code{pyvips} package provides Python bindings for VIPS,
a multithreaded image-processing system with low memory needs.")
(license license:expat)))
(define-public python-pycparser
(package
(name "python-pycparser")
(version "2.21")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pycparser" version))
(sha256
(base32
"01kjlyn5w2nn2saj8w1rhq7v26328pd91xwgqn32z1zp2bngsi76"))))
(outputs '("out" "doc"))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "python" "-m" "unittest" "discover")))
(add-after 'install 'install-doc
(lambda* (#:key outputs #:allow-other-keys)
(let* ((data (string-append (assoc-ref outputs "doc") "/share"))
(doc (string-append data "/doc/" ,name "-" ,version))
(examples (string-append doc "/examples")))
(mkdir-p examples)
(for-each (lambda (file)
(copy-file (string-append "." file)
(string-append doc file)))
'("/README.rst" "/CHANGES" "/LICENSE"))
(copy-recursively "examples" examples)))))))
(home-page "https://github.com/eliben/pycparser")
(synopsis "C parser in Python")
(description
"Pycparser is a complete parser of the C language, written in pure Python
using the PLY parsing library. It parses C code into an AST and can serve as
a front-end for C compilers or analysis tools.")
(license license:bsd-3)))
(define-public python2-pycparser
(package-with-python2 python-pycparser))
(define-public python-xlsxwriter
(package
(name "python-xlsxwriter")
(version "3.0.3")
(source
(origin
;; There are no tests in the PyPI tarball.
(method git-fetch)
(uri (git-reference
(url "https://github.com/jmcnamara/XlsxWriter")
(commit (string-append "RELEASE_" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1lr7mmik6r4zns069i4zfx1cnwhz6snmlh2zsiry0cwx8cv33wpm"))))
(build-system python-build-system)
(home-page "https://github.com/jmcnamara/XlsxWriter")
(synopsis "Python module for creating Excel XLSX files")
(description
"XlsxWriter is a Python module that can be used to write text, numbers,
formulas and hyperlinks to multiple worksheets in an Excel 2007+ XLSX file.")
(license license:bsd-2)))
(define-public python-pywavelets
(package
(name "python-pywavelets")
(version "1.2.0")
(home-page "https://github.com/PyWavelets/pywt")
(source (origin
(method url-fetch)
(uri (pypi-uri "PyWavelets" version))
(sha256
(base32
"13csbr6ls9q9ww53z2xwwsj0hpsz88rj2iwp623h0kmv8yq6kgbc"))
(snippet
#~(begin
(use-modules ((guix build utils)))
(for-each delete-file
(list
"pywt/_extensions/_cwt.c"
"pywt/_extensions/_dwt.c"
"pywt/_extensions/_pywt.c"
"pywt/_extensions/_pywt.h"
"pywt/_extensions/_swt.c"))))))
(build-system python-build-system)
(arguments
'(#:modules ((ice-9 ftw)
(srfi srfi-1)
(srfi srfi-26)
(guix build utils)
(guix build python-build-system))
#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(let ((cwd (getcwd))
(libdir (find (cut string-prefix? "lib." <>)
(scandir "build"))))
(with-directory-excursion (string-append cwd "/build/" libdir)
(invoke "pytest" "-vv"))))))))
(native-inputs
(list python-cython
python-matplotlib ;for tests
python-pytest))
(propagated-inputs
(list python-numpy))
(synopsis "Wavelet transforms in Python")
(description
"PyWavelets is a library for wavelet transforms in Python. Wavelets are
mathematical basis functions that are localized in both time and frequency.
Wavelet transforms are time-frequency transforms employing wavelets. They are
similar to Fourier transforms, the difference being that Fourier transforms are
localized only in frequency instead of in time and frequency.")
(license license:expat)))
(define-public python-pywal
(package
(name "python-pywal")
(version "3.3.0")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/dylanaraps/pywal")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "039m7dch479hlwddynacdrr0klz6a5bdly5swqbs94hfimficiyf"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'check 'fix-home-directory
(lambda _
;; Tests fail with "Permission denied: '/homeless-shelter'".
(setenv "HOME" "/tmp")
#t)))))
(inputs
(list imagemagick))
(home-page "https://github.com/dylanaraps/pywal")
(synopsis "Color palette generator and applicator")
(description
"Pywal is a tool that generates a color palette from the dominant colors
in an image. It then applies the colors system-wide and on-the-fly in all of
your favourite programs.")
(license license:expat)))
(define-public python-click-didyoumean
(package
(name "python-click-didyoumean")
(version "0.3.1")
(source
(origin
(method git-fetch) ;no tests in PyPI archive
(uri (git-reference
(url "https://github.com/click-contrib/click-didyoumean")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1byfqs3m87zfpvssm1al9dvq94gjd0iddpwrzk6205n18wjsphqb"))))
(build-system pyproject-build-system)
(native-inputs
(list python-poetry-core python-pytest))
(propagated-inputs
(list python-click))
(home-page "https://github.com/timofurrer/click-didyoumean")
(synopsis "Git-like did-you-mean feature in Click")
(description
"This plugin enables git-like did-you-mean feature in Click.")
(license license:expat)))
(define-public python-pywinrm
(package
(name "python-pywinrm")
(version "0.4.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pywinrm" version))
(sha256
(base32
"10gabhhg3rgacd5ahmi2r128z99fzbrbx6mz1nnq0dxmhmn5rpjf"))))
(build-system python-build-system)
(propagated-inputs
(list python-six python-requests_ntlm python-xmltodict
python-kerberos))
(native-inputs
(list python-mock python-pytest))
(home-page "https://github.com/diyan/pywinrm/")
(synopsis
"Python library for Windows Remote Management (WinRM)")
(description
"pywinrm is a Python client for the Windows Remote Management (WinRM)
service. It allows you to invoke commands on target Windows machines from
any machine that can run Python.")
(license license:expat)))
(define-public python-manimpango
(package
(name "python-manimpango")
(version "0.5.0")
(source
(origin
(method git-fetch) ; no tests data in PyPi package
(uri (git-reference
(url "https://github.com/ManimCommunity/ManimPango")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "00mrvswk8yly0m13jq0f432pr19sy3j6w37lrv78ah1j6jz9n50h"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-before 'check 'build-extensions
(lambda _
(invoke "python" "setup.py" "build_ext" "--inplace"))))))
(native-inputs
(list pkg-config
python-cython
python-pytest
python-pytest-cov))
(inputs
(list pango))
(home-page "https://manimpango.manim.community/")
(synopsis "Bindings for Pango for using with Manim")
(description
"Python bindings for ManimPango which is a C binding for Pango,
using Cython.
ManimPango is internally used in Manim to render (non-LaTeX) text.")
(license license:expat)))
(define-public python-xcffib
(package
(name "python-xcffib")
(version "0.11.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "xcffib" version))
(sha256
(base32
"0nkglsm9nbhv238iagmmsjcz6lf1yfdvp5kmspphdj385vz9r50j"))))
(build-system python-build-system)
(inputs
(list libxcb))
(propagated-inputs
(list python-cffi ; used at run time
python-six))
(arguments
`(;; FIXME: Tests need more work. See ".travis.yml" in the repository.
#:tests? #f
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'fix-libxcb-path
(lambda* (#:key inputs #:allow-other-keys)
(let ((libxcb (assoc-ref inputs "libxcb")))
(substitute* '("xcffib/__init__.py")
(("soname = ctypes.util.find_library.*xcb.*")
(string-append "soname = \"" libxcb "/lib/libxcb.so\"\n")))
#t)))
(add-after 'install 'install-doc
(lambda* (#:key outputs #:allow-other-keys)
(let ((doc (string-append (assoc-ref outputs "out") "/share"
"/doc/" ,name "-" ,version)))
(mkdir-p doc)
(copy-file "README.md"
(string-append doc "/README.md"))
#t))))))
(home-page "https://github.com/tych0/xcffib")
(synopsis "XCB Python bindings")
(description
"Xcffib is a replacement for xpyb, an XCB Python bindings. It adds
support for Python 3 and PyPy. It is based on cffi.")
(license license:expat)))
(define-public python-cairocffi
(package
(name "python-cairocffi")
(version "1.6.1")
(source
(origin
;; The PyPI archive does not include the documentation, so use Git.
(method git-fetch)
(uri (git-reference
(url "https://github.com/Kozea/cairocffi")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"161z2bsp0ai4311mz9n0h6vmz80690jbijxx2gqkknygwm2ynjgd"))))
(build-system pyproject-build-system)
(outputs '("out" "doc"))
(inputs
(list glib gtk+ gdk-pixbuf cairo))
(native-inputs
(list python-flit-core
python-numpy
python-pikepdf
python-pytest
python-pytest-cov
python-pytest-runner
python-sphinx
python-sphinx-rtd-theme))
(propagated-inputs
(list python-xcffib)) ; used at run time
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch-paths
(lambda* (#:key inputs #:allow-other-keys)
(substitute* "cairocffi/__init__.py"
;; Hack the dynamic library loading mechanism.
(("find_library\\(library_name\\)")
"\"found\"")
(("filenames = \\(library_filename,\\) \\+ filenames")
"pass")
(("libcairo.so.2")
(search-input-file inputs "/lib/libcairo.so.2")))
(substitute* "cairocffi/pixbuf.py"
(("libgdk_pixbuf-2.0.so.0")
(search-input-file inputs "/lib/libgdk_pixbuf-2.0.so.0"))
(("libgobject-2.0.so.0")
(search-input-file inputs "/lib/libgobject-2.0.so.0"))
(("libglib-2.0.so.0")
(search-input-file inputs "/lib/libglib-2.0.so.0"))
(("libgdk-3.so.0")
(search-input-file inputs "/lib/libgdk-3.so.0")))))
(add-after 'install 'install-doc
(lambda* (#:key inputs outputs #:allow-other-keys)
(let* ((data (string-append (assoc-ref outputs "doc") "/share"))
(doc (string-append data "/doc/" ,name "-" ,version))
(html (string-append doc "/html")))
(setenv "LD_LIBRARY_PATH"
(string-append (assoc-ref inputs "cairo") "/lib" ":"
(assoc-ref inputs "gdk-pixbuf") "/lib"))
(setenv "LANG" "en_US.UTF-8")
(mkdir-p html)
(for-each (lambda (file)
(copy-file (string-append "." file)
(string-append doc file)))
'("/README.rst" "/NEWS.rst"))
(system* "python" "setup.py" "build_sphinx")
(copy-recursively "docs/_build/html" html)
#t))))))
(home-page "https://github.com/Kozea/cairocffi")
(synopsis "Python bindings and object-oriented API for Cairo")
(description
"Cairocffi is a CFFI-based drop-in replacement for Pycairo, a set of
Python bindings and object-oriented API for cairo. Cairo is a 2D vector
graphics library with support for multiple backends including image buffers,
PNG, PostScript, PDF, and SVG file output.")
(license license:bsd-3)))
(define-public python-decorator
(package
(name "python-decorator")
(version "5.0.9")
(source
(origin
(method url-fetch)
(uri (pypi-uri "decorator" version))
(sha256
(base32 "1mcy64hllgm938v8k1x2a4g0q9swsnrfnsvhz59kr28a6ajgpv3j"))))
(build-system python-build-system)
(home-page "https://pypi.org/project/decorator/")
(synopsis "Python module to simplify usage of decorators")
(description
"The aim of the decorator module is to simplify the usage of decorators
for the average programmer, and to popularize decorators usage giving examples
of useful decorators, such as memoize, tracing, redirecting_stdout, locked,
etc. The core of this module is a decorator factory.")
(license license:expat)))
(define-public python-drmaa
(package
(name "python-drmaa")
(version "0.7.7")
(source
(origin
(method url-fetch)
(uri (pypi-uri "drmaa" version))
(sha256
(base32 "0xzqriqyvk5b8hszbavsyxd29wm3sxirm8zvvdm73rs2iq7w4hkx"))))
(build-system python-build-system)
;; The test suite requires libdrmaa which is provided by the cluster
;; environment. At runtime the environment variable DRMAA_LIBRARY_PATH
;; should be set to the path of the libdrmaa library.
(arguments
'(#:tests? #f
#:phases (modify-phases %standard-phases
;; Loading the library fails because DRMAA_LIBRARY_PATH
;; is not configured.
(delete 'sanity-check))))
(home-page "https://pypi.org/project/drmaa/")
(synopsis "Python bindings for the DRMAA library")
(description
"A Python package for Distributed Resource Management (DRM) job
submission and control. This package is an implementation of the DRMAA 1.0
Python language binding specification.")
(license license:bsd-3)))
(define-public python-grako
(package
(name "python-grako")
(version "3.99.9")
(source
(origin
(method url-fetch)
(uri (pypi-uri "grako" version ".zip"))
(sha256
(base32 "0r63i68wcnv63rfjkasq1ah81frz61a6mzbcnaxhrkdpx84p7hzw"))
(snippet
#~(begin (use-modules (guix build utils))
(substitute* "grako/grammars.py"
(("from collections import defaultdict, Mapping")
(string-append "from collections import defaultdict\n"
"from collections.abc import Mapping")))
(substitute* '("grako/util.py"
"grako/walkers.py")
(("collections\\.Mapping") "collections.abc.Mapping"))))))
(build-system python-build-system)
(arguments '(#:tests? #f)) ; Test file 'grako.ebnf' is missing from archive.
(native-inputs
(list unzip python-pytest python-pytest-runner))
(home-page "https://bitbucket.org/neogeny/grako")
(synopsis "EBNF parser generator")
(description
"Grako takes a grammar in a variation of EBNF as input, and outputs a
memoizing PEG/Packrat parser in Python.")
(license license:bsd-3)))
(define-public python-grandalf
(package
(name "python-grandalf")
(version "0.7")
(source
(origin
;; There's no source tarball on PyPI.
(method git-fetch)
(uri (git-reference
(url "https://github.com/bdcht/grandalf")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"03p8w8ljpb87qbyldm3s6b7qi30hfcn43h33iwlgqcf31fjsyr4g"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "python" "setup.py" "pytest"))))))
(native-inputs
(list python-pytest python-pytest-runner))
(propagated-inputs
(list python-numpy python-ply))
(home-page "https://github.com/bdcht/grandalf")
(synopsis "Graph and drawing algorithms framework")
(description
"Grandalf is a Python package made for experimentations with graphs
drawing algorithms. It is written in pure Python, and currently implements
two layouts: the Sugiyama hierarchical layout and the force-driven or energy
minimization approach. While not as fast or featured as graphviz or other
libraries like OGDF (C++), it provides a way to walk and draw graphs no larger
than thousands of nodes, while keeping the source code simple enough to tweak
and hack any part of it for experimental purpose. With a total of about 1500
lines of Python, the code involved in drawing the Sugiyama (dot) layout fits
in less than 600 lines. The energy minimization approach is comprised of only
250 lines!
Grandalf does only 2 not-so-simple things:
@itemize
@item computing the nodes (x,y) coordinates (based on provided nodes
dimensions, and a chosen layout)
@item routing the edges with lines or nurbs
@end itemize
It doesn’t depend on any GTK/Qt/whatever graphics toolkit. This means that it
will help you find where to draw things like nodes and edges, but it’s up to
you to actually draw things with your favorite toolkit.")
;; The user can choose either license.
(license (list license:gpl2 license:epl1.0))))
(define-public python-gridmap
(package
(name "python-gridmap")
(version "0.14.0")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/pygridtools/gridmap")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0v0sgpg6pz8h61f9aqjf5xk0ipr512bbz8dxzjjylksj135qr19l"))))
(build-system python-build-system)
(arguments
'(#:tests? #f ;FIXME: Requires python-cherrypy.
#:phases (modify-phases %standard-phases
;; Importing the web server module requires cherrypy, too.
(delete 'sanity-check))))
(propagated-inputs
(list python-psutil python-drmaa python-pyzmq))
(home-page "https://github.com/pygridtools/gridmap")
(synopsis "Create jobs on a cluster directly from Python")
(description
"Gridmap is a Python package to allow you to easily create jobs on the
cluster directly from Python. You can directly map Python functions onto the
cluster without needing to write any wrapper code yourself.")
(license license:gpl3+)))
(define-public python-honcho
(package
(name "python-honcho")
(version "1.1.0")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/nickstenning/honcho")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1y0r8dw4pqcq7r4n58ixjdg1iy60lp0gxsd7d2jmhals16ij71rj"))))
(build-system python-build-system)
(native-inputs
(list python-pytest python-mock python-tox which)) ;for tests
(propagated-inputs
(list python-jinja2))
(arguments
`(#:phases
(modify-phases %standard-phases
(delete 'check)
(add-after 'install 'check
(lambda* (#:key outputs inputs #:allow-other-keys)
;; fix honcho path in testsuite
(substitute* "tests/conftest.py"
(("'honcho'") (string-append "'" (assoc-ref outputs "out")
"/bin/honcho" "'")))
;; It's easier to run tests after install.
;; Make installed package available for running the tests
(add-installed-pythonpath inputs outputs)
;; Skip failing test_export
(invoke "py.test" "-v" "-k" "not test_export"))))))
(home-page "https://github.com/nickstenning/honcho")
(synopsis "Manage Procfile-based applications")
(description
"A Procfile is a file which describes how to run an application
consisting of several processes. honcho starts all listed processes.
The output of all running processes is collected by honcho and
displayed.")
(license license:expat)))
(define-public python-pebble
(package
(name "python-pebble")
(version "4.6.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Pebble" version))
(sha256
(base32 "16siqc3brbk7dp4d9sg48bjl6a8wyy24aib3il1hf4y2624draxh"))))
(build-system python-build-system)
(native-inputs
(list python-pytest))
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _ (invoke "python" "-m" "pytest" "-sv"))))))
(home-page "https://github.com/noxdafox/pebble")
(synopsis "Threading and multiprocessing for Python")
(description
"Pebble aims to help manage threads and processes in an easier way. It
wraps Python's standard library threading and multiprocessing objects.")
(license license:lgpl3+)))
(define-public python-pexpect
(package
(name "python-pexpect")
(version "4.8.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pexpect" version))
(sha256
(base32 "032cg337h8awydgypz6f4wx848lw8dyrj4zy988x0lyib4ws8rgw"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'check 'prepare-tests
(lambda _
(substitute* (find-files "tests")
(("/bin/ls") (which "ls"))
(("/bin/echo") (which "echo"))
(("/bin/which") (which "which"))
;; Many tests try to use the /bin directory which
;; is not present in the build environment.
;; Use one that's non-empty and unlikely to change.
(("/bin'") "/dev'")
;; Disable failing test. See upstream bug report
;; https://github.com/pexpect/pexpect/issues/568
(("def test_bash") "def _test_bash"))
;; XXX: Socket connection test gets "Connection reset by peer".
;; Why does it not work? Delete for now.
(delete-file "tests/test_socket.py")
#t))
(replace 'check (lambda _ (invoke "nosetests" "-v"))))))
(native-inputs
`(("python-nose" ,python-nose)
("python-pytest" ,python-pytest)
("man-db" ,man-db)
("which" ,which)
("bash-full" ,bash))) ;full Bash for 'test_replwrap.py'
(propagated-inputs
(list python-ptyprocess))
(home-page "https://pexpect.readthedocs.org/")
(synopsis "Controlling interactive console applications")
(description
"Pexpect is a pure Python module for spawning child applications;
controlling them; and responding to expected patterns in their output.
Pexpect works like Don Libes’ Expect. Pexpect allows your script to spawn a
child application and control it as if a human were typing commands.")
(license license:isc)))
(define-public python-sexpdata
(package
(name "python-sexpdata")
(version "0.0.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "sexpdata" version))
(sha256
(base32
"1q4lsjyzzqrdv64l0pv4ij9nd8gqhvxqcrpxc2xpxs652sk2gj0s"))))
(build-system python-build-system)
(home-page "https://github.com/jd-boyd/sexpdata")
(synopsis "S-expression parser for Python")
(description
"Sexpdata is an S-expression parser/serializer. It has load and dump
functions like pickle, json or PyYAML module.")
(license license:bsd-3)))
(define-public python-pathlib2
(package
(name "python-pathlib2")
(version "2.3.7.post1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pathlib2" version))
(sha256
(base32
"0hf62d0lsf37vnr5fxqp5rfn85njgsr45j4rw71w10wbi6nyvq4z"))))
(build-system python-build-system)
(propagated-inputs
(list python-scandir python-six))
(home-page "https://pypi.org/project/pathlib2/")
(synopsis "Object-oriented file system paths")
(description "The goal of pathlib2 is to provide a backport of the
standard @code{pathlib} module which tracks the standard library module, so
all the newest features of the standard @code{pathlib} can be used also on
older Python versions.")
(license license:expat)))
(define-public python-pathy
(package
(name "python-pathy")
(version "0.10.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "pathy" version))
(sha256
(base32
"12v196q3rai33cfzrmb9pqfqv7ailngssjdrzdf8gzym9hdygmjc"))))
(build-system pyproject-build-system)
(propagated-inputs
(list python-dataclasses python-smart-open python-typer))
(native-inputs (list python-mock python-pytest))
(home-page "https://github.com/justindujardin/pathy")
(synopsis "Path interface for local and cloud bucket storage")
(description "Pathy is a python package (with type annotations) for
working with Cloud Bucket storage providers using a @code{pathlib} interface.
It provides @code{pathlib.Path} subclasses for local and cloud bucket
storage.")
(license license:asl2.0)))
(define-public python-importlib-resources
(package
(name "python-importlib-resources")
(version "5.12.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "importlib_resources" version))
(sha256
(base32
"1xi2ggdfdj1bg7w728lvy6j3rjqhklalaanzmscpj7awpy4jbs2b"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
'(modify-phases %standard-phases
;; The build system insists on ignoring the existing environment and
;; running "pip install".
(add-after 'unpack 'do-not-use-pip-install
(lambda _
(substitute* "pyproject.toml"
(("^build-backend.*") "\
build-backend = \"backend\"
backend_path = [\"_custom_build\"]\n")
(("requires = .*") "requires = []\n"))
(mkdir-p "_custom_build")
(with-output-to-file "_custom_build/backend.py"
(lambda _
(display "\
from setuptools import build_meta as _orig
from setuptools.build_meta import *
def get_requires_for_build_wheel(config_settings=None):
return []
def get_requires_for_build_sdist(config_settings=None):
return []
")))
(setenv "PYTHONPATH"
(string-append (getcwd) "/_custom_build")))))))
(native-inputs
(list python-flake8
python-pytest
python-pytest-black
python-pytest-checkdocs
python-pytest-cov
python-pytest-enabler
python-pytest-flake8
python-pytest-mypy
python-setuptools-57
python-setuptools-scm))
(propagated-inputs
(list python-zipp))
(home-page "https://importlib-resources.readthedocs.io/")
(synopsis "Read resources from Python packages")
(description
"@code{importlib_resources} is a backport of Python 3's standard library
@code{importlib.resources} module for Python 2.7, and Python 3.")
(license license:asl2.0)))
(define-public python-importlib-metadata
(package
(name "python-importlib-metadata")
(version "5.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "importlib_metadata" version))
(sha256
(base32
"1kf7qclcz820xl5wwjpzcwpfy6shj7ymwh4xzxvpl2xs5gb4hka0"))))
(build-system python-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
;; XXX: PEP 517 manual build/install procedures copied from
;; python-isort.
(replace 'build
(lambda _
;; ZIP does not support timestamps before 1980.
(setenv "SOURCE_DATE_EPOCH" "315532800")
(invoke "python" "-m" "build" "--wheel" "--no-isolation" ".")))
(replace 'install
(lambda* (#:key outputs #:allow-other-keys)
(let ((whl (car (find-files "dist" "\\.whl$"))))
(invoke "pip" "--no-cache-dir" "--no-input"
"install" "--no-deps" "--prefix" #$output whl))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv" "tests")))))))
(propagated-inputs (list python-zipp))
(native-inputs
(list python-pypa-build
python-pyfakefs
python-pytest
python-setuptools-scm))
(home-page "https://importlib-metadata.readthedocs.io/")
(synopsis "Read metadata from Python packages")
(description
"@code{importlib_metadata} is a library which provides an API for
accessing an installed Python package's metadata, such as its entry points or
its top-level name. This functionality intends to replace most uses of
@code{pkg_resources} entry point API and metadata API. Along with
@code{importlib.resources} in Python 3.7 and newer, this can eliminate the
need to use the older and less efficient @code{pkg_resources} package.")
(license license:asl2.0)))
(define-public python-importmagic
(package
(name "python-importmagic")
(version "0.1.7")
(source
(origin
(method url-fetch)
(uri (pypi-uri "importmagic" version))
(sha256
(base32
"1n7qxa1snj06aw45mcfz7bxc46zp7fxj687140g2k6jcnyjmfxrz"))))
(build-system python-build-system)
(arguments
(list #:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-v")))))))
(native-inputs
(list python-pytest))
(home-page "https://github.com/alecthomas/importmagic")
(synopsis "Library for adding, removing and managing Python imports")
(description
"Importmagic is a Python library for automatically managing imports by
finding unresolved symbols in Python code and their corresponding imports.")
(license license:bsd-3)))
(define-public python-inotify-simple
(package
(name "python-inotify-simple")
(version "1.3.5")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/chrisjbillington/inotify_simple")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "1dv9svrcz31acyq9smjlnw75xv3x5wpn5h6s8j8h0vrqyl3d7l05"))))
(build-system python-build-system)
(home-page
"https://github.com/chrisjbillington/inotify_simple")
(synopsis "Simple wrapper around inotify library")
(description
"@code{inotify-simple} is a simple wrapper around inotify library.")
(license license:bsd-3)))
(define-public python-interface-meta
(package
(name "python-interface-meta")
(version "1.3.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "interface_meta" version))
(sha256
(base32 "18brkmz2ssjikkrkb23cwccp683yi6y1alfdbmjvjgxpppw96i4a"))))
(build-system pyproject-build-system)
(native-inputs (list python-poetry-core python-pytest))
(home-page "https://github.com/matthewwardrop/interface_meta")
(synopsis
"API for enforced method signatures and consistent documentation")
(description
"This package provides a convenient way to expose an extensible API with
enforced method signatures and consistent documentation.")
(license license:expat)))
(define-public python-jaraco-classes
(package
(name "python-jaraco-classes")
(version "3.2.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "jaraco.classes" version))
(sha256
(base32 "0d6g7qvfv1jlzbzh6asprqdblqd59grvlvr3nwbdqdqrmwlbfm7d"))))
(build-system python-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
;; Do not test the myproject.toml build as it tries to pull
;; dependencies from the Internet.
(invoke "pytest" "-vv" "-k" "not project")))))))
(native-inputs
(list python-pytest
python-pytest-black
python-pytest-checkdocs
python-pytest-cov
python-pytest-enabler-bootstrap ;OK since not propagated
python-pytest-flake8
python-pytest-mypy
python-setuptools-scm
python-wheel))
(propagated-inputs (list python-more-itertools))
(home-page "https://github.com/jaraco/jaraco.classes")
(synopsis "Utility functions for Python class constructs")
(description "This Python library contains utility functions for Python
class constructs.")
(license license:expat)))
(define-public python-jaraco-collections
(package
(name "python-jaraco-collections")
(version "5.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "jaraco.collections" version))
(sha256
(base32 "0s7y3jr7c173k38pck1b17kxnvx2fl0qh9m9gdf64pr9kz8fi00n"))))
(build-system pyproject-build-system)
;; Do not test pyproject.toml with python-pytest-checkdocs as it tries to
;; download dependencies.
(arguments
'(#:test-flags '("-k" "not project")))
(propagated-inputs (list python-jaraco-text))
;; TODO: Add python-pytest-ruff to native-inputs once it has been
;; packaged.
(native-inputs (list python-pytest
python-pytest-black
python-pytest-checkdocs
python-pytest-cov
python-pytest-enabler
python-pytest-mypy))
(home-page "https://github.com/jaraco/jaraco.collections")
(synopsis "Provides various collection objects")
(description
"This package provides models and classes to supplement the
standard library @code{collections} module. Examples include
@itemize
@item
RangeMap: A mapping that accepts a range of values for keys.
@item
Projection: A subset over an existing mapping.
@item
KeyTransformingDict: Generalized mapping with keys transformed by a function.
@item
FoldedCaseKeyedDict: A dict whose string keys are case-insensitive.
@item
BijectiveMap: A map where keys map to values and values back to their keys.
@item
ItemsAsAttributes: A mapping mix-in exposing items as attributes.
@item
IdentityOverrideMap: A map whose keys map by default to themselves unless overridden.
@item
FrozenDict: A hashable, immutable map.
@item
Enumeration: An object whose keys are enumerated.
@item
Everything: A container that contains all things.
@item
Least, Greatest: Objects that are always less than or greater than any other.
@item
pop_all: Return all items from the mutable sequence and remove them from that sequence.
@item
DictStack: A stack of dicts, great for sharing scopes.
@item
WeightedLookup: A specialized RangeMap for selecting an item by weights.
@end itemize")
(license license:expat)))
;;; Variant used to break a cycle with python-pytest-enabler.
(define-public python-jaraco-context-bootstrap
(hidden-package
(package
(name "python-jaraco-context-bootstrap")
(version "4.1.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "jaraco.context" version))
(sha256
(base32 "0hbjm1rpxf4pzmbdp9rh3ali4zqnlcr8m97bhh1nizxvzcpxim7h"))))
(build-system python-build-system)
(arguments (list #:tests? #f))
(native-inputs (list python-setuptools-scm))
(home-page "https://github.com/jaraco/jaraco.context")
(synopsis "Context managers Python library")
(description "This Python library provides context managers-related
procedures.")
(license license:expat))))
(define-public python-jaraco-context
(package/inherit python-jaraco-context-bootstrap
(name "python-jaraco-context")
(arguments
(substitute-keyword-arguments
(package-arguments python-jaraco-context-bootstrap)
((#:tests? _ #f)
(not (%current-target-system)))
((#:phases phases #~%standard-phases)
#~(modify-phases #$phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
;; Do not test the myproject.toml build as it tries to pull
;; dependencies from the Internet.
(invoke "pytest" "-vv" "-k" "not project"))))))))
(native-inputs
(modify-inputs
(package-native-inputs python-jaraco-context-bootstrap)
(append python-pytest
python-pytest-black
python-pytest-checkdocs
python-pytest-cov
python-pytest-enabler-bootstrap ;OK since not propagated
python-pytest-flake8
python-pytest-mypy)))
(properties (alist-delete 'hidden? (package-properties
python-jaraco-context-bootstrap)))))
;;; Variant used to break a cycle with python-pytest-enabler.
(define-public python-jaraco-functools-bootstrap
(hidden-package
(package
(name "python-jaraco-functools-bootstrap")
(version "3.5.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "jaraco.functools" version))
(sha256
(base32 "186xqzs3bqhjwajnprxy3sc3h0w5vdld8spc1dxjnn9720yykq1i"))))
(build-system python-build-system)
(arguments (list #:tests? #f))
(native-inputs (list python-setuptools-scm))
(propagated-inputs (list python-more-itertools))
(home-page "https://github.com/jaraco/jaraco.functools")
(synopsis "Python library extending Python's @code{functools}")
(description "This library extends the standard @code{functools} Python
module with a few extra procedures.")
(license license:expat))))
(define-public python-jaraco-functools
(package/inherit python-jaraco-functools-bootstrap
(name "python-jaraco-functools")
(arguments
(substitute-keyword-arguments
(package-arguments python-jaraco-functools-bootstrap)
((#:tests? _ #f)
(not (%current-target-system)))
((#:phases phases #~%standard-phases)
#~(modify-phases #$phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
;; Do not test the myproject.toml build as it tries to pull
;; dependencies from the Internet. Do not run a test that
;; tries to emulate a broken proprietary CI set-up, fails
;; to do so correctly, and then throws an error about it.
(invoke "pytest" "-vv" "-k"
"not project and not test_function_throttled"))))))))
(native-inputs
(modify-inputs
(package-native-inputs python-jaraco-functools-bootstrap)
(append python-jaraco-classes
python-pytest
python-pytest-black
python-pytest-checkdocs
python-pytest-cov
python-pytest-enabler-bootstrap ;OK since not propagated
python-pytest-flake8
python-pytest-mypy)))
(properties (alist-delete 'hidden? (package-properties
python-jaraco-functools-bootstrap)))))
(define-public python-jaraco-packaging
(package
(name "python-jaraco-packaging")
(version "6.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "jaraco.packaging" version))
(sha256
(base32
"0zimrnkh33b9g8ffw11mjh6kvs54cy5gcjw1h5cl1r7dc833dmkm"))))
(build-system python-build-system)
(propagated-inputs
(list python-pytest
python-pytest-checkdocs
python-pytest-flake8
python-rst.linker
python-setuptools
python-setuptools-scm
python-six
python-sphinx))
(home-page "https://github.com/jaraco/jaraco.packaging")
(synopsis "Tools to supplement packaging Python releases")
(description
"This package provides various tools to supplement packaging Python
releases.")
(license license:expat)))
(define-public python-jaraco-test
(package
(name "python-jaraco-test")
(version "5.3.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "jaraco.test" version))
(sha256
(base32
"0h0x8qmvfkfqvwdx2m7kwhn53sg26k8gkaas7s1730ak772zqrvz"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases #~(modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "pytest" "-vv" "-k" "http"))))))
(propagated-inputs (list python-jaraco-context python-jaraco-functools))
(native-inputs (list python-flake8
python-pytest
python-pytest-black
python-pytest-checkdocs
python-pytest-cov
python-pytest-enabler
python-pytest-flake8
python-pytest-mypy))
(home-page "https://github.com/jaraco/jaraco.test")
(synopsis "Testing support by jaraco")
(description "This package provides testing support by jaraco.")
(license license:expat)))
(define-public python-jaraco-text
(package
(name "python-jaraco-text")
(version "3.12.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "jaraco.text" version))
(sha256
(base32 "0b2rmx0sa61f75lkkr4nfaj3mkgmn3x9c1akpwarfbmksk42b7iq"))))
(build-system pyproject-build-system)
;; Do not test pyproject.toml with python-pytest-checkdocs as it tries to
;; download dependencies.
(arguments
'(#:test-flags '("-k" "not project")))
(propagated-inputs (list python-autocommand python-inflect
python-jaraco-context python-jaraco-functools
python-more-itertools))
;; TODO: Add python-pytest-ruff to native-inputs once it has been
;; packaged.
(native-inputs (list python-pytest
python-pytest-black
python-pytest-checkdocs
python-pytest-cov
python-pytest-enabler
python-pytest-mypy))
(home-page "https://github.com/jaraco/jaraco.text")
(synopsis "Provides various routines for text manipulation")
(description
"This package provides handy routines for dealing with text,
such as wrapping, substitution, trimming, stripping, prefix and suffix
removal, line continuation, indentation, comment processing, identifier
processing, values parsing, case insensitive comparison, and more.")
(license license:expat)))
(define-public python-pypytools
(package
(name "python-pypytools")
(version "0.6.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pypytools" version))
(sha256
(base32 "0ag5xyzagprji0m2pkqsfy8539s003mn41pl6plbmh6iwi9w0h51"))))
(build-system python-build-system)
(arguments (list #:tests? #f)) ; no tests
(propagated-inputs (list python-py))
(home-page "https://github.com/antocuni/pypytools/")
(synopsis
"Tools to use PyPy-specific features, with CPython fallbacks")
(description
"This package provides a collection of useful tools to use PyPy-specific
features, with CPython fallbacks.")
(license license:x11)))
(define-public python-simplegeneric
(package
(name "python-simplegeneric")
(version "0.8.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "simplegeneric" version ".zip"))
(sha256
(base32 "0wwi1c6md4vkbcsfsf8dklf3vr4mcdj4mpxkanwgb6jb1432x5yw"))))
(build-system python-build-system)
(native-inputs
(list unzip))
(home-page "https://cheeseshop.python.org/pypi/simplegeneric")
(synopsis "Python module for simple generic functions")
(description
"The simplegeneric module lets you define simple single-dispatch generic
functions, akin to Python’s built-in generic functions like @code{len()},
@code{iter()} and so on. However, instead of using specially-named methods,
these generic functions use simple lookup tables, akin to those used by
e.g. @code{pickle.dump()} and other generic functions found in the Python
standard library.")
(license license:zpl2.1)))
(define-public python-ipython-genutils
;; TODO: This package is retired, check if can be removed, see description.
(package
(name "python-ipython-genutils")
(version "0.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ipython_genutils" version))
(sha256
(base32 "19l2pp1c64ansr89l3cqh19jdi2ixhssdzx0vz4n6r52a6i281is"))))
(build-system python-build-system)
(arguments `(#:tests? #f)) ; no tests
(home-page "https://ipython.org")
(synopsis "Vestigial utilities from IPython")
(description
"This package provides retired utilities from IPython. No packages
outside IPython/Jupyter should depend on it.
This package shouldn't exist. It contains some common utilities shared by
Jupyter and IPython projects during The Big Split. As soon as possible, those
packages will remove their dependency on this, and this package will go
away.")
(license license:bsd-3)))
;;; Variant used to break a cycle with python-ipykernel.
(define-public python-ipyparallel-bootstrap
(hidden-package
(package
(name "python-ipyparallel-bootstrap")
(version "8.2.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ipyparallel" version))
(sha256
(base32
"0wiwfd7870zbmczzn96jqxxjf2zcbcaxnsl1ddn8hspwa8y4frzj"))))
(build-system python-build-system)
(arguments
(list
#:tests? #f
#:phases #~(modify-phases %standard-phases
;; The python-ipykernel is normally propagated but is
;; removed from this package to break the cycle.
(delete 'sanity-check))))
(propagated-inputs
(list python-dateutil
python-decorator
python-entrypoints
python-ipython
;; python-ipykernel is omitted here to break a cycle.
python-jupyter-client-bootstrap
python-psutil
python-pyzmq
python-tornado-6
python-tqdm
python-traitlets))
(home-page "https://ipython.org/")
(synopsis "Interactive Parallel Computing with IPython")
(description
"@code{ipyparallel} is a Python package and collection of CLI scripts for
controlling clusters for Jupyter. @code{ipyparallel} contains the following
CLI scripts:
@enumerate
@item ipcluster - start/stop a cluster
@item ipcontroller - start a scheduler
@item ipengine - start an engine
@end enumerate")
(license license:bsd-3))))
(define-public python-ipyparallel
(package
(inherit python-ipyparallel-bootstrap)
(name "python-ipyparallel")
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "pytest" "-vv"))))))
(native-inputs
(list python-ipython
python-pytest
python-pytest-asyncio
python-pytest-cov
python-pytest-tornado
python-testpath))
(propagated-inputs
(modify-inputs (package-propagated-inputs python-ipyparallel-bootstrap)
(replace "python-jupyter-client-bootstrap" python-jupyter-client)
(append python-ipykernel)))
(properties (alist-delete 'hidden? (package-properties
python-ipyparallel-bootstrap)))))
(define-public python-ipython-cluster-helper
(package
(name "python-ipython-cluster-helper")
(version "0.6.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ipython-cluster-helper" version))
(sha256
(base32
"1l6mlwxlkxpbvawfwk6qffich7ahg9hq2bxfissgz6144p3k4arj"))
(modules '((guix build utils)))
(snippet
'(begin (substitute* "requirements.txt"
(("ipython.*") "ipython\n"))
#t))))
(build-system python-build-system)
(arguments
`(#:tests? #f ; Test suite can't find IPython.
#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key inputs outputs tests? #:allow-other-keys)
(if tests?
(begin
(setenv "HOME" (getcwd))
(add-installed-pythonpath inputs outputs)
(invoke "python" "example/example.py" "--local"))
#t))))))
(propagated-inputs
(list python-ipyparallel
python-ipython
python-netifaces
python-pyzmq
python-setuptools
python-six))
(home-page "https://github.com/roryk/ipython-cluster-helper")
(synopsis
"Simplify IPython cluster start up and use for multiple schedulers")
(description
"@code{ipython-cluster-helper} creates a throwaway parallel IPython
profile, launches a cluster and returns a view. On program exit it shuts the
cluster down and deletes the throwaway profile.")
(license license:expat)))
(define-public python-ipython-sql
(package
(name "python-ipython-sql")
(version "0.4.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ipython-sql" version))
(sha256
(base32 "1r6rz8jgrqzhkf2flwjw75d96g8l7kykmx5wli3q1988w96391ip"))))
(build-system python-build-system)
(arguments
(list #:tests? #f ;must run under IPython
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'permit-newer-prettytable
;; See https://github.com/catherinedevlin/ipython-sql/issues/202
(lambda _
(substitute* "setup.py"
(("prettytable<1")
"prettytable")))))))
(propagated-inputs
(list python-ipython
python-ipython-genutils
python-prettytable
python-six
python-sqlalchemy
python-sqlparse))
(home-page "https://github.com/catherinedevlin/ipython-sql")
(synopsis "RDBMS access via IPython")
(description "This library connects to a database, using SQLAlchemy URL
connect strings, then issue SQL commands within IPython or IPython Notebook.")
(license license:expat)))
(define-public python-traitlets
(package
(name "python-traitlets")
(version "5.9.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "traitlets" version))
(sha256
(base32
"1ndslgsan1g5xhrvxrv2x03zcfvjb8nzfd90y1m7bkv8khdf5kgn"))))
(build-system pyproject-build-system)
(native-inputs
(list python-hatchling
python-pre-commit
python-pytest
python-pytest-mock))
(home-page "https://ipython.org")
(synopsis "Configuration system for Python applications")
(description
"Traitlets is a framework that lets Python classes have attributes with
type checking, dynamically calculated default values, and ‘on change’
callbacks. The package also includes a mechanism to use traitlets for
configuration, loading values from files or from command line arguments. This
is a distinct layer on top of traitlets, so you can use traitlets in your code
without using the configuration machinery.")
(license license:bsd-3)))
(define-public python-treelib
(package
(name "python-treelib")
(version "1.7.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "treelib" version))
(sha256
(base32
"0qgv61g1p06kzf5fd2hcim5s49nzbv8k210frnk45rmr2vs1mzwv"))))
(build-system python-build-system)
(propagated-inputs (list python-six))
(home-page "https://github.com/caesar0301/treelib")
(synopsis "Implementation of a tree structure in Python")
(description
"This package provides a Python implementation of a tree structure.")
(license license:asl2.0)))
(define-public python-optree
(package
(name "python-optree")
(version "0.10.0")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/metaopt/optree")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1q3wljk7cyl5rsam02sfsj8zjrqx4c3x9vic8j6xx13p8czpsisg"))
(patches (search-patches "python-optree-fix-32-bit.patch"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-typing-extensions))
(native-inputs
(list python-pytest
python-pytest-cov
python-pytest-xdist
cmake
pybind11))
(home-page "https://github.com/metaopt/optree")
(synopsis "Optimized PyTree Utilities")
(description "This package contains operations on PyTrees (a tree made of
container data structures in Python).")
(license license:asl2.0)))
(define-public python-jupyter-core
(package
(name "python-jupyter-core")
(version "4.10.0")
(source
(origin
(method url-fetch)
(uri (string-append (pypi-uri "jupyter_core" version)))
(sha256
(base32
"1v0s31rmwppdmww135hif03hy164j9kimirh24kxfcbvdfql9pm6"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
;; Some tests write to $HOME.
(setenv "HOME" "/tmp")
(invoke "pytest" "-vv"
"-k"
(string-append
;; XXX: These tests fail with "ModuleNotFoundError: No
;; module named 'jupyter_core'".
"not test_argv0 and not test_path_priority "
"and not test_not_on_path")))))
(add-after 'unpack 'patch-testsuite
(lambda _
;; test_not_on_path() and test_path_priority() try to run a test
;; that loads jupyter_core, so we need GUIX_PYTHONPATH
(substitute* "jupyter_core/tests/test_command.py"
(("env = \\{'PATH': ''\\}")
"env = {'PATH': '', 'PYTHONPATH': os.environ['GUIX_PYTHONPATH']}")
(("env = \\{'PATH': str\\(b\\)\\}")
"env = {'PATH': str(b), 'PYTHONPATH': os.environ['GUIX_PYTHONPATH']}"))))
;; Migration is running whenever etc/jupyter exists, but the
;; Guix-managed directory will never contain any migratable IPython
;; config files and cannot be written to anyway, so just pretend we
;; already did that.
(add-after 'install 'disable-migration
(lambda* (#:key outputs #:allow-other-keys)
(mkdir-p (string-append (assoc-ref outputs "out") "/etc/jupyter"))
(invoke "touch"
(string-append
(assoc-ref outputs "out")
"/etc/jupyter/migrated")))))))
(propagated-inputs (list python-traitlets))
(native-inputs (list python-pytest))
;; This package provides the `jupyter` binary and thus also exports the
;; search paths.
(native-search-paths
(list (search-path-specification
(variable "JUPYTER_CONFIG_PATH")
(files '("etc/jupyter")))
(search-path-specification
(variable "JUPYTER_PATH")
(files '("share/jupyter")))))
(home-page "https://jupyter.org/")
(synopsis "Jupyter base package")
(description
"Jupyter core is the base package on which Jupyter projects rely.")
(license license:bsd-3)))
;; Bootstrap variant of jupyter-client, which breaks the loop between ipykernel
;; and jupyter-client by removing the former from its native-inputs and
;; disabling tests.
(define-public python-jupyter-client-bootstrap
(hidden-package
(package
(name "python-jupyter-client-bootstrap")
(version "7.2.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "jupyter_client" version))
(sha256
(base32
"12pbp177bfb3710y1a5598mwn8ffhyzmpll67m0nmalb98savnwg"))))
(build-system pyproject-build-system)
(arguments
(list
#:tests? #f
#:phases
#~(modify-phases %standard-phases
;; The deprecation warnings break the tests.
(add-after 'unpack 'hide-zmq-deprecation-warnings
(lambda _
(substitute* "pyproject.toml"
(("\"ignore:There is no current event loop:DeprecationWarning:zmq\"," m)
(string-append m "
\"ignore:zmq.eventloop.ioloop.*:DeprecationWarning\",
\"ignore:zmq.tests.BaseZMQTestCase.*:DeprecationWarning\"")))))
(add-after 'unpack 'set-tool-file-names
(lambda* (#:key inputs #:allow-other-keys)
(substitute* "jupyter_client/localinterfaces.py"
(("'ip'")
(format #f "'~a'" (search-input-file inputs "sbin/ip")))))))))
(inputs (list iproute))
(propagated-inputs
(list python-dateutil
python-entrypoints
python-jupyter-core
python-nest-asyncio
python-pyzmq
python-tornado-6
python-traitlets))
(home-page "https://jupyter.org/")
(synopsis "Jupyter protocol implementation and client libraries")
(description
"The @code{jupyter_client} package contains the reference implementation
of the Jupyter protocol. It also provides client and kernel management APIs
for working with kernels, and the @code{jupyter kernelspec} entrypoint for
installing @code{kernelspec}s for use with Jupyter frontends.")
(license license:bsd-3))))
(define-public python-jupyter-client
(let ((base python-jupyter-client-bootstrap))
(package
(inherit base)
(name "python-jupyter-client")
(arguments
(substitute-keyword-arguments (package-arguments base)
((#:tests? _ #f)
(not (%current-target-system)))
((#:phases phases #~%standard-phases)
#~(modify-phases #$phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
;; Some tests try to write to $HOME.
(setenv "HOME" "/tmp")
(invoke "pytest" "-vv"
"-k"
;; XXX "RuntimeError: Kernel died before replying
;; to kernel_info", but there's no more
;; information.
"not test_start_parallel_process_kernels"))))))))
(native-inputs
(list python-pytest
python-pytest-asyncio
python-pytest-timeout
python-async-generator
python-ipython
python-ipykernel-bootstrap))
(properties (alist-delete 'hidden? (package-properties base))))))
(define-public python-ipykernel
(package
(name "python-ipykernel")
(version "6.13.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ipykernel" version))
(sha256
(base32 "0q5yni8h08nadsn53f957p0pjsjhwl2b2lp1hqz3jn0854z2fa0f"))))
(build-system pyproject-build-system)
(arguments
(list
#:modules '((guix build pyproject-build-system)
(guix build utils)
(ice-9 match))
#:phases
#~(modify-phases %standard-phases
;; The deprecation warnings break the tests.
(add-after 'unpack 'hide-zmq-deprecation-warnings
(lambda _
(substitute* "pyproject.toml"
(("\"ignore:There is no current event loop:DeprecationWarning\"" m)
(string-append m ",
\"ignore:make_current is deprecated.*:DeprecationWarning\",
\"ignore:zmq.eventloop.ioloop.*:DeprecationWarning\",
\"ignore:zmq.tests.BaseZMQTestCase.*:DeprecationWarning\"")))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(match (primitive-fork)
(0 ;child process
(setenv "HOME" "/tmp")
(execlp "pytest" "pytest" "-vv"))
(pytest-pid
;; Reap zombie processes, necessary for the
;; 'test_shutdown_subprocesses' test to pass.
(let loop ()
(match (waitpid WAIT_ANY)
((pid . status)
(if (= pid pytest-pid)
(unless (zero? status)
(error "`pytest' exited with status"
status))
(loop))))))))))
(add-after 'install 'set-python-file-name
(lambda* (#:key inputs #:allow-other-keys)
;; Record the absolute file name of the 'python' executable in
;; 'kernel.json'.
(substitute* (string-append #$output "/share/jupyter"
"/kernels/python3/kernel.json")
(("\"python\"")
(format #f "~s" (search-input-file inputs
"/bin/python3")))))))))
(propagated-inputs
(list python-debugpy
python-ipython
python-jupyter-client ;imported at runtime during connect
python-matplotlib-inline
;;python-nest-asyncio
;;python-packaging
python-psutil
python-tornado-6
python-traitlets))
(inputs (list python)) ;for cross compilation
(native-inputs
(list python-flaky
python-ipyparallel-bootstrap
;; XXX: Our Pytest package captures its native inputs in its
;; wrapper script (such as python-nose), which is used in the code
;; and causes deprecation warnings. Using the bootstrap variant
;; avoids that.
python-pytest-bootstrap
python-pytest-timeout))
(home-page "https://ipython.org")
(synopsis "IPython Kernel for Jupyter")
(description "This package provides the IPython kernel for Jupyter.")
(license license:bsd-3)))
;; Bootstrap variant of ipykernel, which uses the bootstrap jupyter-client to
;; break the cycle between ipykernel and jupyter-client.
(define-public python-ipykernel-bootstrap
(let ((parent python-ipykernel))
(hidden-package
(package
(inherit parent)
(name "python-ipykernel-bootstrap")
(arguments (list #:tests? #f
;; The package should normally propagate ipykernel,
;; left out here to break the cycle.
#:phases #~(modify-phases %standard-phases
(delete 'sanity-check))))
(native-inputs '())
(propagated-inputs
(modify-inputs (package-propagated-inputs parent)
(replace "python-jupyter-client" python-jupyter-client-bootstrap)
(append python-ipyparallel-bootstrap)))))))
(define-public python-pari-jupyter
(package
(name "python-pari-jupyter")
(version "1.4.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pari-jupyter" version))
(sha256
(base32
"1ikqvv335qfrhmlji0iclci6pnm2c3fvnxf031jr1d68j79g6ypd"))))
(build-system python-build-system)
(arguments '(#:tests? #f)) ;no test suite
(inputs
(list pari-gp readline python-ipykernel))
(home-page "https://github.com/sagemath/pari-jupyter")
(synopsis "Jupyter kernel for PARI/GP")
(description "The package provides a PARI/GP kernel for Jupyter.")
(license license:gpl3+)))
(define-public python-backcall
(package
(name "python-backcall")
(version "0.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "backcall" version))
(sha256
(base32
"07jy4562lvnhkk6kfr3cphmizy88anlhmbwb8kdzlz2ypqkvzgaw"))))
(build-system python-build-system)
(home-page "https://github.com/takluyver/backcall/")
(synopsis "Specifications for callback functions passed in to an API")
(description
"If your code lets other people supply callback functions, it's important
to specify the function signature you expect, and check that functions support
that. Adding extra parameters later would break other peoples code unless
you're careful. The @code{backcall} package provides a way of specifying the
callback signature using a prototype function.")
(license license:bsd-3)))
(define-public python-pubmed-parser
(package
(name "python-pubmed-parser")
(version "0.3.1")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/titipata/pubmed_parser")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"195cmjjg7xdwjj5455h78q7jnxnccia07a19xwndhlkxv7vk9v60"))))
(build-system pyproject-build-system)
(propagated-inputs
(list python-lxml
python-numpy
python-requests
python-six
python-unidecode))
(native-inputs
(list python-pytest
python-pytest-cov))
(home-page "https://github.com/titipata/pubmed_parser")
(synopsis "Parser for Pubmed Open-Access Subset and MEDLINE XML repository")
(description
"This package provides a Python parser for Pubmed Open-Access Subset and
MEDLINE XML repository.")
(license license:expat)))
(define-public python-pure-eval
(package
(name "python-pure-eval")
(version "0.2.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pure_eval" version))
(sha256
(base32 "1hwsm85cwqwh6d6x4vzcimla2865s6v19ms3ym81ganzyq534i9b"))))
(build-system python-build-system)
(native-inputs (list python-pytest python-setuptools-scm))
(home-page "https://github.com/alexmojaki/pure_eval")
(synopsis "Python library to evaluate abstract syntax tree nodes")
(description "The @code{pure_eval} Python library can safely evaluate
abstract syntax tree (AST) nodes without side effects.")
(license license:expat)))
(define-public python-ast-decompiler
(package
(name "python-ast-decompiler")
(version "0.7.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ast_decompiler" version))
(sha256
(base32 "0dw3fck4ajilphqw4hdpa8pmqxg3jfk2xkmjnk3kx5pqwl3sbhzg"))
;; We need to manually create an __init__.py file under the tests/
;; directory, since it is not included in the distributed
;; version. (See:
;; https://github.com/JelleZijlstra/ast_decompiler/issues/52).
(modules '((guix build utils)))
(snippet '(call-with-output-file "tests/__init__.py"
(const #t)))))
(build-system pyproject-build-system)
(native-inputs (list python-flit-core python-pytest))
(home-page "https://github.com/JelleZijlstra/ast_decompiler")
(synopsis
"Decompile an @acronym{AST, Abstract Syntax Tree} to Python code")
(description
"This library provides functionality to decompile @acronym{AST, Abstract
Syntax Tree} objects, as generated by the standard library @code{ast} module,
to Python code.")
(license license:asl2.0)))
(define-public python-asttokens
(package
(name "python-asttokens")
(version "2.2.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "asttokens" version))
(sha256
(base32 "1wwlpvnrh67z4228841zgpqc46vigslzmbvk2izbfc3g585i28j6"))))
(build-system python-build-system)
(propagated-inputs (list python-six))
(native-inputs (list python-astroid python-pytest python-setuptools-scm))
(home-page "https://github.com/gristlabs/asttokens")
(synopsis "Python library to annotate abstract syntax trees")
(description "The @code{asttokens} module annotates Python abstract syntax
trees (ASTs) with the positions of tokens and text in the source code that
generated them. It makes it possible for tools that work with logical AST
nodes to find the particular text that resulted in those nodes, for example
for automated refactoring or highlighting.")
(license license:asl2.0)))
(define-public python-littleutils
(package
(name "python-littleutils")
(version "0.2.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "littleutils" version))
(sha256
(base32 "0vwijrylppmk0nbddqvn527r9cg3zw8d6zk6r58hslry42jf7jp6"))))
(build-system python-build-system)
(home-page "https://github.com/alexmojaki/littleutils")
(synopsis "Python utility function collection")
(description "@code{littleutils} is a small collection of Python utility
functions, useful in the context of writing unit tests among other uses.")
(license license:expat)))
(define-public python-stack-data
(package
(name "python-stack-data")
(version "0.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "stack_data" version))
(sha256
(base32 "04lfcj5qrn4qikjw89qbdzqwm0xm4bgm4m8rll1rafk3pm0jssa5"))))
(build-system python-build-system)
(propagated-inputs (list python-asttokens python-executing python-pure-eval))
(native-inputs
(list python-cython
python-littleutils
python-pygments
python-pytest
python-setuptools-scm
python-typeguard))
(home-page "https://github.com/alexmojaki/stack_data")
(synopsis "Python stack frame and traceback manipulation library")
(description "The @code{stack_data} Python library extracts data from
stack frames and tracebacks. Is can be used to display more useful tracebacks
than the default.")
(license license:expat)))
(define-public python-ipython
(package
(name "python-ipython")
(version "8.5.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ipython" version ".tar.gz"))
(sha256
(base32 "114z175hnv1lgprj06zfcil7lkq013rggjbrc43gsxkmv1fdyyq9"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'make-docs-reproducible
(lambda _
(substitute* "IPython/sphinxext/ipython_directive.py"
((".*import datetime") "")
((".*datetime.datetime.now\\(\\)") "")
(("%timeit") "# %timeit"))))
(replace 'check
(lambda* (#:key inputs outputs tests? #:allow-other-keys)
(when tests?
(setenv "HOME" "/tmp/") ;required by some tests
(invoke "python" "-m" "pytest" "-vv")))))))
(inputs (list readline which))
(propagated-inputs
(list python-backcall
python-decorator
python-jedi
python-jinja2
python-jsonschema
python-matplotlib
python-matplotlib-inline
python-mistune
python-nbformat
python-numpy
python-numpydoc
python-pexpect
python-pickleshare
python-prompt-toolkit
python-pygments
python-pyzmq
python-simplegeneric
python-stack-data
python-terminado
python-traitlets))
(native-inputs
(list graphviz
pkg-config
;; For tests.
python-pytest
python-requests
python-testpath))
(home-page "https://ipython.org")
(synopsis "IPython is a tool for interactive computing in Python")
(description
"IPython provides a rich architecture for interactive computing with:
Powerful interactive shells, a browser-based notebook, support for interactive
data visualization, embeddable interpreters and tools for parallel
computing.")
(properties '((cpe-name . "ipython")))
(license license:bsd-3)))
(define-public python-ipython-documentation
(package
(inherit python-ipython)
(name "python-ipython-documentation")
(version (package-version python-ipython))
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'set-pythonpath
(lambda _
;; Ensure this fixed (via the
;; "python-ipython-documentation-chars.patch" patch) copy of
;; IPython gets used.
(setenv "PYTHONPATH" (string-append (getcwd)))))
(add-before 'build 'configure-sphinx-for-xelatex
(lambda _
;; Use XeLaTeX instead of PDFLaTeX, as it can
;; cope with the Unicode characters present in the
;; contributors page, for example.
(substitute* "docs/source/conf.py"
(("project = 'IPython'.*" all)
(string-append all "latex_engine = 'xelatex'\n")))
;; XXX: The Sphinx-generated ipython.tex specifies the GNU
;; FreeFont font to be searched via its extension, which uses
;; kpathsea instead of fontconfig and fail (see:
;; https://github.com/sphinx-doc/sphinx/issues/10347). Create a
;; symlink to GNU FreeFont and add it to the TEXMF tree via
;; GUIX_TEXMF.
(mkdir-p "texmf-dist/fonts/opentype/public")
(symlink (string-append
#$(this-package-native-input "font-gnu-freefont")
"/share/fonts/opentype")
(string-append
(getcwd) "/"
"texmf-dist/fonts/opentype/public/gnu-freefont"))
(setenv "GUIX_TEXMF" (string-append (getenv "GUIX_TEXMF") ":"
(getcwd) "/texmf-dist"))))
(delete 'build)
(delete 'check)
(replace 'install
(lambda* (#:key outputs #:allow-other-keys)
(let* ((data (string-append #$output "/share"))
(doc (string-append data "/doc/" #$name "-" #$version))
(html (string-append doc "/html"))
(info (string-append data "/info")))
(invoke "make" "-C" "docs" "info" "html" "pdf"
(string-append "SPHINXOPTS=-j"
(number->string (parallel-job-count))))
(install-file "COPYING.rst" doc)
(copy-recursively "examples" (string-append doc "/examples"))
;; Install HTML documentation.
(copy-recursively "docs/build/html" html)
;; Likewise for the PDF.
(install-file "docs/build/latex/ipython.pdf" doc)
;; Likewise for the info manual.
(install-file "docs/build/texinfo/ipython.info" info)
(symlink (string-append html "/_images")
(string-append info "/ipython-figures"))))))))
(native-inputs
(list fontconfig ;for XDG_DATA_DIRS to locate fonts
font-gnu-freefont
graphviz
python-docrepr
python-ipykernel
python-sphinx
python-sphinx-rtd-theme
texinfo
(texlive-updmap.cfg
(list texlive-latexmk
texlive-polyglossia
texlive-xetex
texlive-xindy))))))
(define-public python-urwid
(package
(name "python-urwid")
(version "2.6.15")
(source
(origin
(method url-fetch)
(uri (pypi-uri "urwid" version))
(sha256
(base32
"06v7m5xayyglzv630qsbg7zh6k37h6k94w7x7xkdkj481lrmgk4y"))))
(build-system pyproject-build-system)
(arguments
(list
;; XXX The test suite requires python-tornado but fails to find it
;; whether or not it is available in the build environment.
#:tests? #f
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'remove-vterm-tests
;; According to Debian these tests are cursed.
;; https://salsa.debian.org/python-team/packages/urwid/-/blob/debian/2.1.2-2/debian/changelog#L141
(lambda _
(delete-file "tests/test_vterm.py"))))))
(propagated-inputs
(list python-typing-extensions python-wcwidth))
(native-inputs
(list python-setuptools-scm))
(home-page "https://urwid.org")
(synopsis "Console user interface library for Python")
(description
"Urwid is a curses-based UI/widget library for Python. It includes many
features useful for text console applications.")
(license license:lgpl2.1+)))
(define-public python-urwid-readline
(package
(name "python-urwid-readline")
(version "0.13")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/rr-/urwid_readline")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"0y9k86p31mlr9rwnrbljvfgl183r5j60yaj0r3scljn1m0mlg8qg"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv")))))))
(propagated-inputs (list python-urwid))
(native-inputs (list python-pytest))
(home-page "https://github.com/rr-/urwid_readline")
(synopsis "Text input widget for urwid that supports readline shortcuts")
(description
"This package provides a textbox edit widget for @code{python-urwid} that
supports @code{readline} shortcuts.")
(license license:expat)))
(define-public python-urwidgets
(package
(name "python-urwidgets")
(version "0.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "urwidgets" version))
(sha256
(base32 "123n9qfg6qwwh1911y71c3msxi89n8cjj15wh2snqmwdkyfwy6nl"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-urwid))
(home-page "https://github.com/AnonymouX47/urwidgets")
(synopsis "Collection of widgets for urwid")
(description
"This package provides a collection of widgets for urwid.")
(license license:expat)))
(define-public python-textdistance
(package
(name "python-textdistance")
(version "4.2.1")
(source
(origin
;; There are no tests in the PyPI tarball.
(method git-fetch)
(uri (git-reference
(url "https://github.com/life4/textdistance")
(commit (string-append "v." version))))
(file-name (git-file-name name version))
(sha256
(base32 "1g17i356fnny4k6hjr2ayy9k77jbvd6zzmngws2kbrnvhss1wgwf"))))
(build-system python-build-system)
(arguments
`(#:test-target "pytest"
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'delete-external-test
(lambda _
;; All tests in this file require external libraries.
(delete-file "tests/test_external.py")
#t)))))
(native-inputs
(list python-hypothesis
python-isort
python-numpy
python-pytest
python-pytest-runner
python-tabulate))
(home-page "https://github.com/life4/textdistance")
(synopsis "Compute distance between the two texts")
(description "@code{textdistance} is a pure Python library for comparing
distance between two or more sequences by many algorithms.")
(license license:expat)))
(define-public python-urwidtrees
(package
(name "python-urwidtrees")
(version "1.0.3")
(source
(origin
(method git-fetch)
;; package author intends on distributing via github rather than pypi:
;; https://github.com/pazz/alot/issues/877#issuecomment-230173331
(uri (git-reference
(url "https://github.com/pazz/urwidtrees")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"1y1vysx7jg0vbrarlsykhf7nmr8fc6k1fva1q3i98xq2m30s6r68"))))
(build-system python-build-system)
(arguments
'(#:tests? #f)) ; no tests
(propagated-inputs (list python-urwid))
(native-inputs (list python-mock))
(home-page "https://github.com/pazz/urwidtrees")
(synopsis "Tree widgets for urwid")
(description "Urwidtrees is a Widget Container API for the @code{urwid}
toolkit. Use it to build trees of widgets.")
(license license:gpl3+)))
(define-public python-ua-parser
(package
(name "python-ua-parser")
(version "0.10.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ua-parser" version))
(sha256
(base32
"0csh307zfz666kkk5idrw3crj1x8q8vsqgwqil0r1n1hs4p7ica7"))))
(build-system python-build-system)
(arguments
`(#:tests? #f)) ;no test suite in release
(native-inputs
(list python-pyyaml))
(home-page "https://github.com/ua-parser/uap-python")
(synopsis "User agent parser")
(description
"@code{ua-parser} is a Python port of Browserscope's user agent parser.")
(license license:asl2.0)))
(define-public python-user-agents
(package
(name "python-user-agents")
(version "2.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "user-agents" version))
(sha256
(base32
"09mddriffm9rkwr30081fy9n3cn976ms8pwc8p8hhlxnilbjavfk"))))
(build-system python-build-system)
(arguments
`(#:tests? #f)) ;missing devices.json test file in release
(propagated-inputs
(list python-ua-parser))
(home-page "https://github.com/selwin/python-user-agents")
(synopsis "User Agent strings parsing library")
(description
"A library to identify devices (phones, tablets) and their capabilities by
parsing (browser/HTTP) user agent strings.")
(license license:expat)))
(define-public python-pydbus
(package
(name "python-pydbus")
(version "0.6.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pydbus" version))
(sha256
(base32 "0b0gipvz7vcfa9ddmwq2jrx16d4apb0hdnl5q4i3h8jlzwp1c1s2"))))
(build-system python-build-system)
(propagated-inputs (list python-pygobject))
(home-page "https://github.com/LEW21/pydbus")
(synopsis "Pythonic D-Bus library")
(description "Pydbus provides a pythonic interface to the D-Bus
message bus system. Pydbus can be used to access remote objects and
also for object publication. It is based on PyGI, the Python GObject
Introspection bindings, which is the recommended way to use GLib from Python.")
(license license:lgpl2.1+)))
(define-public python-dbus
(package
(name "python-dbus")
(version "1.2.18")
(source
(origin
(method url-fetch)
(uri (string-append "https://dbus.freedesktop.org/releases/dbus-python/"
"dbus-python-" version ".tar.gz"))
(sha256
(base32 "0q3jrw515z98mqdk9x822nd95rky455zz9876f1nqna5igkd3gcj"))))
(build-system gnu-build-system)
(native-inputs
(list pkg-config))
(inputs
`(("python" ,python-wrapper)
("dbus-glib" ,dbus-glib)))
(synopsis "Python bindings for D-bus")
(description "python-dbus provides bindings for libdbus, the reference
implementation of D-Bus.")
(home-page "https://www.freedesktop.org/wiki/Software/DBusBindings/")
(properties `((python2-variant . ,(delay python2-dbus))))
(license license:expat)))
(define-public python2-dbus
(package/inherit python-dbus
(name "python2-dbus")
(inputs `(("python" ,python-2)
("libxcrypt" ,libxcrypt) ;required by Python.h
,@(alist-delete "python"
(package-inputs python-dbus))))
(arguments
`(#:configure-flags '("PYTHON_VERSION=2")))))
(define-public python-dbus-next
(package
(name "python-dbus-next")
(version "0.2.3")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/altdesktop/python-dbus-next")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1ahaz52kny1p9xxv6phvk4iq56rg8li390wywlxf2yslaij1188h"))))
(build-system python-build-system)
(native-inputs
(list python-pytest))
(home-page "https://github.com/altdesktop/python-dbus-next")
(synopsis "Zero-dependency DBus library for Python with asyncio support")
(description
"This DBus library for Python aims to be a fully-featured high-level
library primarily geared towards integration of applications into desktop and
mobile environments.")
(license license:expat)))
(define-public python-notify2
(package
(name "python-notify2")
(version "0.3.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "notify2" version))
(sha256
(base32
"0z8rrv9rsg1r2qgh2dxj3dfj5xnki98kgi3w839kqby4a26i1yik"))))
(build-system python-build-system)
(arguments `(#:tests? #f)) ; tests depend on system state
(propagated-inputs
(list python-dbus))
(home-page "https://bitbucket.org/takluyver/pynotify2")
(synopsis "Python interface to D-Bus notifications")
(description
"Pynotify2 provides a Python interface for sending D-Bus notifications.
It is a reimplementation of pynotify in pure Python, and an alternative to
the GObject Introspection bindings to libnotify for non-GTK applications.")
(license (list license:bsd-2
license:lgpl2.1+))))
;; beautifulsoup4 has a totally different namespace than 3.x,
;; and pypi seems to put it under its own name, so I guess we should too
(define-public python-beautifulsoup4
(package
(name "python-beautifulsoup4")
(version "4.11.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "beautifulsoup4" version))
(sha256
(base32
"14v68cpfzckfz63n9hnbsm271jvzvxscyijz83mhha7gcmdsb6md"))))
(build-system python-build-system)
(arguments
'(#:phases (modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv")))))))
(native-inputs
(list python-pytest))
(propagated-inputs
(list python-soupsieve python-html5lib python-lxml))
(home-page
"https://www.crummy.com/software/BeautifulSoup/bs4/")
(synopsis
"Python screen-scraping library")
(description
"Beautiful Soup is a Python library designed for rapidly setting up
screen-scraping projects. It offers Pythonic idioms for navigating,
searching, and modifying a parse tree, providing a toolkit for
dissecting a document and extracting what you need. It automatically
converts incoming documents to Unicode and outgoing documents to UTF-8.")
(license license:expat)))
(define-public python-soupsieve
(package
(name "python-soupsieve")
(version "2.2.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "soupsieve" version))
(sha256
(base32
"1k70gpn2d3vgdyxbdy536dgm4kchcraxz6lmgsfg3324iy2789q5"))))
(build-system python-build-system)
(arguments
;;XXX: 2 tests fail currently despite claming they were to be
;;skipped. Also, beautifulsoup4 may depend on this in the future, so we
;;don't want to create a circular dependency.
(list #:tests? #f
#:phases
#~(modify-phases %standard-phases
;; Circular dependency with python-beautifulsoup4.
(delete 'sanity-check))))
(home-page "https://github.com/facelessuser/soupsieve")
(synopsis "CSS selector library")
(description
"Soup Sieve is a CSS selector library designed to be used with Beautiful
Soup 4. It aims to provide selecting, matching, and filtering using modern
CSS selectors. Soup Sieve currently provides selectors from the CSS level 1
specifications up through the latest CSS level 4 drafts and beyond (though
some are not yet implemented).")
(license license:expat)))
(define-public python-netifaces
(package
(name "python-netifaces")
(version "0.11.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "netifaces" version))
(sha256
(base32
"0cnajf5rl4w1sa72j921scbigr6zndig56cq8ggpx45jdqa7jfh4"))))
(build-system python-build-system)
(home-page "https://github.com/al45tair/netifaces")
(synopsis
"Python module for portable network interface information")
(description
"Netifaces is a Python module providing information on network
interfaces in an easy and portable manner.")
(license license:expat)))
(define-public python-networkx
(package
(name "python-networkx")
(version "2.8.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "networkx" version))
(sha256
(base32 "19h18f5j79l7kmwm5cvm75fadjgmkzw5m3pyvb9cnq0860q7faxx"))))
(build-system python-build-system)
(arguments
'(#:phases (modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(if tests?
(invoke "pytest" "-vv" "--pyargs" "networkx")
(format #t "test suite not run~%")) #t)))))
(propagated-inputs (list python-decorator))
(native-inputs (list python-pytest))
(home-page "https://networkx.github.io/")
(synopsis
"Python module for creating and manipulating graphs and networks")
(description
"NetworkX is a Python package for the creation, manipulation, and study
of the structure, dynamics, and functions of complex networks.")
(license license:bsd-3)))
(define-public python-datrie
(package
(name "python-datrie")
(version "0.8.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "datrie" version))
(sha256
(base32
"0pbn32flkrpjiwfcknmj6398qa81ba783kbcvwan3kym73v0hnsj"))))
(build-system python-build-system)
(native-inputs
(list python-cython python-hypothesis python-pytest
python-pytest-runner))
(home-page "https://github.com/kmike/datrie")
(synopsis "Fast, efficiently stored trie for Python")
(description
"This package provides a fast, efficiently stored trie implementation for
Python.")
(license license:lgpl2.1+)))
(define-public python-amply
(package
(name "python-amply")
(version "0.1.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "amply" version))
(sha256
(base32
"0f1db9zp0rsfzxvaz55xwh8h5rfdgr9a2a715g06ic8nknsdq4nb"))))
(build-system python-build-system)
(propagated-inputs
(list python-docutils python-pyparsing))
(native-inputs
(list python-setuptools-scm))
(home-page "https://github.com/willu47/amply")
(synopsis "Load and manipulate AMPL/GLPK data as Python data structures")
(description
"Amply allows you to load and manipulate AMPL/GLPK data as Python data
structures.")
(license license:epl1.0)))
(define-public python-pulp
(package
(name "python-pulp")
(version "2.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "PuLP" version))
(sha256
(base32
"1dammrg0f1v0r028i3rpxbf2bsyxmjq0q6ihb4x2wsdki44z3bxj"))))
(build-system python-build-system)
(propagated-inputs
(list python-amply))
(home-page "https://github.com/coin-or/pulp")
(synopsis "Linear Programming modeler")
(description
"PuLP is a Linear Programming modeler written in Python. PuLP can
generate MPS or LP files and call GLPK, COIN CLP/CBC, CPLEX, and GUROBI to
solve linear problems.")
(license license:expat)))
(define-public python-py-tes
(package
(name "python-py-tes")
(version "0.4.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "py-tes" version))
(sha256
(base32 "0b272y392v0mnq0f3sm5kgcx8fn4qwfbym89hhvqxz3xkganr4pn"))))
(build-system python-build-system)
(propagated-inputs
(list python-attrs python-dateutil python-future python-requests))
(home-page "https://github.com/ohsu-comp-bio/py-tes")
(synopsis "Library for communicating with the GA4GH Task Execution API")
(description "This package provides a library for communicating with the
GA4GH Task Execution API.")
(license license:expat)))
(define-public python-toposort
(package
(name "python-toposort")
(version "1.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "toposort" version))
(sha256
(base32
"1b2hppzjg3p006qya3yfdnp76dwq8frl97lypdam0kw4xxb8yhm7"))))
(build-system python-build-system)
(home-page "https://gitlab.com/ericvsmith/toposort")
(synopsis "Topological sort algorithm")
(description
"This package provides an implementation of a topological sort
algorithm.")
(license license:asl2.0)))
(define-public python-altgraph
(package
(name "python-altgraph")
(version "0.17.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "altgraph" version))
(sha256
(base32 "01j48np3g50g6insjkszsz0vifwlm6gspria5vdwlkbciywznnhv"))))
(build-system pyproject-build-system)
(native-inputs (list python-pytest))
(home-page "https://altgraph.readthedocs.io")
(synopsis "Python graph network package")
(description
"This package provides tools for constructing graphs, BFS and DFS
traversals, topological sort, shortest paths, and more with graphviz
output.")
(license license:expat)))
(define-public python-three-merge
(package
(name "python-three-merge")
(version "0.1.1")
(source
(origin
;; There are no tests in the PyPI tarball.
(method git-fetch)
(uri (git-reference
(url "https://github.com/spyder-ide/three-merge")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1fw28swh6jq4myr09j7gv68l241b8vwg470ak5xv0x4xwh2a1m86"))))
(build-system python-build-system)
(arguments
`(#:test-target "pytest"))
(propagated-inputs
(list python-diff-match-patch))
(native-inputs
(list python-flaky python-pytest python-pytest-cov
python-pytest-runner python-pytest-timeout))
(home-page "https://github.com/spyder-ide/three-merge")
(synopsis "Library for merging two strings with respect to a base one")
(description
"This package provides a Python library to perform a 3-way merge between
strings, based on @code{diff-match-patch}. This library performs merges at a
character level, as opposed to most VCS systems, which opt for a line-based
approach.")
(license license:expat)))
(define-public snakemake
(package
(name "snakemake")
(version "5.32.2")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/snakemake/snakemake")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0nxp4z81vykv07kv2b6zrwk7ns8s10zqsb7vcignp8695yq3nlcm"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
'(list
;; We have no TES support.
"--ignore=tests/test_tes.py"
;; This test attempts to change S3 buckets on AWS and fails
;; because there are no AWS credentials.
"--ignore=tests/test_tibanna.py"
;; It's a similar story with this test, which requires access
;; to the Google Storage service.
"--ignore=tests/test_google_lifesciences.py")
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'tabulate-compatibility
(lambda _
(substitute* "snakemake/dag.py"
(("\"job\": rule,")
"\"job\": rule.name,"))))
(add-after 'unpack 'patch-version
(lambda _
(substitute* "setup.py"
(("version=versioneer.get_version\\(\\)")
(format #f "version=~s" #$version)))
(substitute* '("snakemake/_version.py"
"versioneer.py")
(("0\\+unknown") #$version))))
;; For cluster execution Snakemake will call Python. Since there is
;; no suitable PYTHONPATH set, cluster execution will fail. We fix
;; this by calling the snakemake wrapper instead.
(add-after 'unpack 'call-wrapper-not-wrapped-snakemake
(lambda _
(substitute* "snakemake/executors/__init__.py"
(("\\{sys.executable\\} -m snakemake")
(string-append #$output "/bin/snakemake")))))
(add-before 'check 'pre-check
(lambda _ (setenv "HOME" "/tmp"))))))
(propagated-inputs
(list python-appdirs
python-configargparse
python-datrie
python-docutils
python-gitpython
python-jinja2
python-jsonschema
python-nbformat
python-networkx
python-psutil
python-pulp
python-pyyaml
python-ratelimiter
python-requests
python-toposort
python-wrapt))
(native-inputs
(list git-minimal
python-wrapper
python-pytest
python-pandas
python-requests-mock))
(home-page "https://snakemake.readthedocs.io")
(synopsis "Python-based execution environment for make-like workflows")
(description
"Snakemake aims to reduce the complexity of creating workflows by
providing a clean and modern domain specific specification language (DSL) in
Python style, together with a fast and comfortable execution environment.")
(license license:expat)))
(define-public snakemake-6
(package
(inherit snakemake)
(name "snakemake")
(version "6.15.5")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/snakemake/snakemake")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "09yrpi9f86r9yvcm2dfjs5zy87c4j31bxama77kfd6y8yfrrjlai"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
;; For cluster execution Snakemake will call Python. Since there is
;; no suitable GUIX_PYTHONPATH set, cluster execution will fail. We
;; fix this by calling the snakemake wrapper instead.
;; XXX: There is another instance of sys.executable on line 692, but
;; it is not clear how to patch it.
(add-after 'unpack 'call-wrapper-not-wrapped-snakemake
(lambda* (#:key outputs #:allow-other-keys)
(substitute* "snakemake/executors/__init__.py"
(("\\{sys.executable\\} -m snakemake")
(string-append #$output "/bin/snakemake")))))
(add-after 'unpack 'tabulate-compatibility
(lambda _
(substitute* "snakemake/dag.py"
(("\"job\": rule,")
"\"job\": rule.name,"))))
(add-after 'unpack 'patch-version
(lambda _
(substitute* "setup.py"
(("version=versioneer.get_version\\(\\)")
(format #f "version=~s" #$version)))
(substitute* '("snakemake/_version.py"
"versioneer.py")
(("0\\+unknown") #$version))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(setenv "HOME" "/tmp")
;; This test attempts to change S3 buckets on AWS and fails
;; because there are no AWS credentials.
(delete-file "tests/test_tibanna.py")
(invoke "pytest")))))))
(propagated-inputs
(list python-appdirs
python-configargparse
python-connection-pool
python-datrie
python-docutils
python-filelock
python-gitpython
python-jinja2
python-jsonschema
python-nbformat
python-networkx
python-psutil
python-pulp
python-pyyaml
python-py-tes
python-ratelimiter
python-requests
python-smart-open
python-stopit
python-tabulate
python-toposort
python-wrapt))
(native-inputs
(list git-minimal
python-wrapper
python-pytest
python-pandas
python-requests-mock))))
(define-public snakemake-7
(package
(inherit snakemake-6)
(name "snakemake")
(version "7.7.0")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/snakemake/snakemake")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1qrqbmx4cbis0wxr6dl2rdjv9v627sbirsz6v5c31vlbqwkvs04q"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
;; For cluster execution Snakemake will call Python. Since there is
;; no suitable GUIX_PYTHONPATH set, cluster execution will fail. We
;; fix this by calling the snakemake wrapper instead.
(add-after 'unpack 'call-wrapper-not-wrapped-snakemake
(lambda* (#:key outputs #:allow-other-keys)
(substitute* "snakemake/executors/__init__.py"
(("self\\.get_python_executable\\(\\),")
"")
(("\"-m snakemake\"")
(string-append "\"" #$output
"/bin/snakemake" "\""))
;; The snakemake command produced by format_job_exec contains
;; references to /gnu/store. Prior to patching above that's
;; just a reference to Python; after patching it's a reference
;; to the snakemake executable.
;;
;; In Tibanna execution mode Snakemake arranges for a certain
;; Docker image to be deployed to AWS. It then passes its own
;; command line to Tibanna. This is misguided because it only
;; ever works if the local Snakemake command was run inside
;; the same Docker image. In the case of using Guix this is
;; never correct, so we need to replace the store reference.
(("tibanna_args.command = command")
(string-append
"tibanna_args.command = command.replace('"
#$output "/bin/snakemake', 'python3 -m snakemake')")))))
;; No longer needed with 7.15.2+
(add-after 'unpack 'tabulate-compatibility
(lambda _
(substitute* "snakemake/dag.py"
(("\"job\": rule,")
"\"job\": rule.name,"))))
(add-after 'unpack 'patch-version
(lambda _
(substitute* "setup.py"
(("version=versioneer.get_version\\(\\)")
(format #f "version=~s" #$version)))
(substitute* '("snakemake/_version.py"
"versioneer.py")
(("0\\+unknown") #$version))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(setenv "HOME" "/tmp")
;; This test attempts to change S3 buckets on AWS and fails
;; because there are no AWS credentials.
(delete-file "tests/test_tibanna.py")
;; It's a similar story with this test, which requires access
;; to the Google Storage service.
(delete-file "tests/test_google_lifesciences.py")
(invoke "pytest")))))))
(propagated-inputs
(list python-appdirs
python-configargparse
python-connection-pool
python-datrie
python-docutils
python-filelock
python-gitpython
python-jinja2
python-jsonschema
python-nbformat
python-networkx
python-psutil
python-pulp
python-pyyaml
python-py-tes
python-ratelimiter
python-requests
python-retry
python-smart-open
python-stopit
python-tabulate
python-toposort
python-wrapt
python-yte))
(native-inputs
(list git-minimal
python-wrapper
python-pytest
python-pandas
python-requests-mock))))
(define-public python-pyqrcode
(package
(name "python-pyqrcode")
(version "1.2.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "PyQRCode" version))
(sha256
(base32
"1m9ln8k9v7dfbh1i81225hx5mdsh8mpf9g7r4wpbfmiyfcs7dgzx"))))
(build-system python-build-system)
(home-page
"https://github.com/mnooner256/pyqrcode")
(synopsis "QR code generator")
(description
"Pyqrcode is a QR code generator written purely in Python with
SVG, EPS, PNG and terminal output.")
(license license:bsd-3)))
(define-public python-seaborn
(package
(name "python-seaborn")
(version "0.13.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "seaborn" version))
(sha256
(base32
"0ycibcs6kvd3xi4zsxna81claqifyb9dn6z6jwc5x7lqqplnbbdz"))))
(build-system pyproject-build-system)
(propagated-inputs
(list python-ipykernel
python-matplotlib
python-mypy
python-nbconvert
python-numpy
python-numpydoc
python-pandas
python-pyyaml
python-scipy
python-statsmodels))
(native-inputs
(list python-flake8
python-flit-core
python-pre-commit
python-pytest
python-pytest-cov
python-pytest-xdist))
(home-page "https://seaborn.pydata.org/")
(synopsis "Statistical data visualization")
(description
"Seaborn is a library for making attractive and informative statistical
graphics in Python. It is built on top of matplotlib and tightly integrated
with the PyData stack, including support for numpy and pandas data structures
and statistical routines from scipy and statsmodels.")
(license license:bsd-3)))
(define-public python-session-info
(package
(name "python-session-info")
(version "1.0.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "session_info" version))
(sha256
(base32
"1dxnrgaxd2nb44n423mnrx119hmnh2yxdnzaw8mg60x7rh1mxniw"))))
(build-system python-build-system)
(propagated-inputs (list python-stdlib-list))
(home-page "https://gitlab.com/joelostblom/session_info")
(synopsis "Output version information for modules currently loaded")
(description
"This package outputs version information for modules loaded in the current
session, Python, and the OS.")
(license license:bsd-3)))
(define-public python-mpmath
(package
(name "python-mpmath")
(version "1.2.1")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/fredrik-johansson/mpmath")
(commit "c6a35f9ee7c294bcf4e0517bc76b268843db9499")))
(file-name (git-file-name name version))
(sha256
(base32
"0ifw59fjjls3mas104rh0frilvab2fhk1dkjraxlqni5n9l676im"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'build 'set-version
(lambda _
(setenv "SETUPTOOLS_SCM_PRETEND_VERSION" ,version)
;; ZIP does not support timestamps before 1980.
(setenv "SOURCE_DATE_EPOCH" "315532800")))
(replace 'check
(lambda* (#:key tests? inputs outputs #:allow-other-keys)
(when tests?
(add-installed-pythonpath inputs outputs)
(invoke "pytest" "-vv")))))))
(native-inputs
(list python-pytest python-setuptools-scm))
(home-page "https://mpmath.org")
(synopsis "Arbitrary-precision floating-point arithmetic in python")
(description
"@code{mpmath} can be used as an arbitrary-precision substitute for
Python's float/complex types and math/cmath modules, but also does much
more advanced mathematics.")
(license license:bsd-3)))
(define-public python-bigfloat
(package
(name "python-bigfloat")
(version "0.4.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "bigfloat" version))
(sha256
(base32 "1f0c1hdr39bbl5rds5r1waa1papjmjiyp0ixs64mkjiahzg6pfaq"))))
(build-system python-build-system)
(inputs
(list mpfr))
(propagated-inputs
(list python-six))
(home-page "https://github.com/mdickinson/bigfloat")
(synopsis "Arbitrary precision floating-point arithmetic for Python")
(description
"This package provides a Python interface to the MPFR library for
multiprecision arithmetic.")
(license license:lgpl3+)))
(define-public python-plac
(package
(name "python-plac")
(version "1.3.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "plac" version))
(sha256
(base32 "1410h6jw1ksi24kb55xzkwqzba2qqjwiga1s354bf3s5s1jdig9q"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'fix-tkinter
(lambda _
(substitute* "plac_tk.py"
(("from Tkinter import Tk")
"from tkinter import Tk")
(("from ScrolledText import ScrolledText")
"from tkinter.scrolledtext import ScrolledText")))))))
(native-inputs
`(("python-tkinter" ,python "tk")))
(home-page "https://github.com/ialbert/plac")
(synopsis "Command line arguments parser")
(description "This package can generate command line parameters from
function signatures.")
(license license:bsd-3)))
(define-public python-yte
(package
(name "python-yte")
(version "1.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "yte" version))
(sha256
(base32 "07hm1warpqi4ifqgkaz5sg887x4a44yhxafmpf835ywnpchg4s03"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'set-HOME
(lambda _ (setenv "HOME" "/tmp"))))))
(propagated-inputs (list python-plac python-pyyaml))
(home-page "https://github.com/koesterlab/yte")
(synopsis "YAML template engine with Python expressions")
(description
"This package provides a YAML template engine with Python expressions.")
(license license:expat)))
(define-public python-syllables
(package
(name "python-syllables")
(version "1.0.3")
(source (origin
(method url-fetch)
(uri (pypi-uri "syllables" version))
(sha256
(base32
"0wkl6h0rg6fbsxfp0a8fnibf3l4l6lbh6z12cvcilgb6qhxzpmv3"))))
(build-system python-build-system)
(home-page "https://github.com/prosegrinder/python-syllables")
(synopsis "Package for estimating the number of syllables in a word")
(description
"This package provides a Python package for estimating the number of
syllables in a word.")
(license license:gpl3)))
(define-public python-sympy
(package
(name "python-sympy")
(version "1.11.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "sympy" version))
(sha256
(base32 "0n46x1rfy8c2a9za3yp2va5icigxj805f9fmiq8c1drwwvf808z3"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key outputs #:allow-other-keys)
(invoke
(or (which "python3") (which "python"))
"-c" "import sympy; sympy.test(\"/core\")"))))))
(propagated-inputs
(list python-mpmath))
(home-page "https://www.sympy.org/")
(synopsis "Python library for symbolic mathematics")
(description
"SymPy is a Python library for symbolic mathematics. It aims to become a
full-featured computer algebra system (CAS) while keeping the code as simple
as possible in order to be comprehensible and easily extensible.")
(license license:bsd-3)))
(define-public python-q
(package
(name "python-q")
(version "2.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "q" version))
(sha256
(base32
"1mgfazh8fkizh6walra2zv885f3lcgr3nb02v1frfm4p8ddcy3yy"))))
(build-system python-build-system)
(home-page "https://github.com/zestyping/q")
(synopsis "Quick-and-dirty debugging output for tired programmers")
(description
"q is a Python module for \"print\" style of debugging Python code. It
provides convenient short API for print out of values, tracebacks, and
falling into the Python interpreter.")
(license license:asl2.0)))
(define-public python-qnorm
(package
(name "python-qnorm")
(version "0.8.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "qnorm" version))
(sha256
(base32
"1iykxrvlg32h78d3cr0137x93w8krcwc8gdqyfj55id917pz7ck1"))))
(build-system pyproject-build-system)
(arguments
(list
#:tests? #false ;there are none
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'fix-pyproject-format
(lambda _
(substitute* "pyproject.toml"
(("url = .*") (string-append "version = \"" #$version "\""))
(("python_requires.*") "")
(("packages =.*") "")
(("install_requires") "dependencies")
(("\"Maarten van der Sande <maartenvandersande@hotmail.com>\"")
"{ name = \"Maarten van der Sande\", email = \"maartenvandersande@hotmail.com\"}")
(("license = \"MIT\"") "license = { file = \"LICENSE\"}")))))))
(propagated-inputs (list python-numba python-numpy python-pandas))
(home-page "https://github.com/Maarten-vd-Sande/qnorm")
(synopsis "Quantile normalization")
(description "This tool implements quantile normalization. It properly
resolves rank ties, which is important when ties happen frequently, such as
when working with discrete numbers (integers) in count tables. This
implementation should be relatively fast, and can use multiple cores to sort
the columns and tie-resolvement is accelerated by numba.")
(license license:expat)))
(define-public python-xlib
(package
(name "python-xlib")
(version "0.29")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/python-xlib/python-xlib")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "17cwd2knqm2vwrii3kqii9abwsnydhpg4byqx1vy7rjs6i1vbqfc"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'check 'start-xserver
(lambda* (#:key inputs #:allow-other-keys)
(let ((xorg-server (assoc-ref inputs "xorg-server")))
;; There must be a running X server and make check doesn't
;; start one. Therefore we must do it.
(system (format #f "~a/bin/Xvfb :1 &" xorg-server))
(setenv "DISPLAY" ":1")
#t))))))
(native-inputs
(list python-mock python-setuptools-scm xorg-server))
(propagated-inputs
(list python-six))
(home-page "https://github.com/python-xlib/python-xlib")
(synopsis "Python X11 client library")
(description
"The Python X Library is intended to be a fully functional
X client library for Python programs. It is useful to implement
low-level X clients. It is written entirely in Python.")
(license license:gpl2+)))
(define-public python-singledispatch
(package
(name "python-singledispatch")
(version "4.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "singledispatch" version))
(sha256
(base32
"1z5qbbvvjvh3cwcjv57p7vzhayx0j1ysnvjq0d5py6k5d2ljghzk"))))
(build-system pyproject-build-system)
(native-inputs
(list python-pytest
python-six)) ; required for conversion, not at run-time
(home-page
"https://docs.python.org/3/library/functools.html#functools.singledispatch")
(synopsis "Backport of singledispatch feature from Python 3.4")
(description
"This library brings functools.singledispatch from Python 3.4 to Python
2.6-3.3.")
(license license:expat)))
;; the python- version can be removed with python-3.5
(define-public python-backports-abc
(package
(name "python-backports-abc")
(version "0.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "backports_abc" version))
(sha256
(base32
"1pkv8d1zxj5f9i227dxbjczncbv7ks7ywnjwyxfjagm02i2yafq3"))))
(build-system python-build-system)
(home-page "https://github.com/cython/backports_abc")
(synopsis "Backport of additions to the 'collections.abc' module")
(description
"Python-backports-abc provides a backport of additions to the
@code{collections.abc} module in Python-3.5.")
(license license:psfl)))
(define-public python-backports-csv
(package
(name "python-backports-csv")
(version "1.0.7")
(source
(origin
(method url-fetch)
(uri (pypi-uri "backports.csv" version))
(sha256
(base32 "0vdx5jlhs91iizc8j8l8811nqprwvdx39pgkdc82w2qkfgzxyxqj"))))
(build-system python-build-system)
(home-page "https://github.com/ryanhiebert/backports.csv")
(synopsis "Backport of Python 3's csv module for Python 2")
(description
"Provides a backport of Python 3's @code{csv} module for parsing
comma separated values. The API of the @code{csv} module in Python 2
is drastically different from the @code{csv} module in Python 3.
This is due, for the most part, to the difference between str in
Python 2 and Python 3.")
(license license:psfl)))
(define-public python-waf
(package
(name "python-waf")
(version "2.0.19")
(source (origin
(method url-fetch)
(uri (string-append "https://waf.io/"
"waf-" version ".tar.bz2"))
(sha256
(base32
"19dvqbsvxz7ch03dh1v0znklrwxlz6yzddc3k9smzrrgny4jch6q"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'build
(lambda _
;; XXX: Find a way to add all extra tools.
(let ((tools '("gccdeps"
"clang_compilation_database")))
(invoke "python" "waf-light" "configure" "build"
(string-append "--tools="
(string-join tools ","))))))
(replace 'check
(lambda _
(invoke "python" "waf" "--version")))
(replace 'install
(lambda* (#:key outputs #:allow-other-keys)
(let ((out (assoc-ref outputs "out")))
(install-file "waf" (string-append out "/bin")))
#t))
;; waf breaks when it is wrapped.
(delete 'wrap))))
(home-page "https://waf.io/")
(synopsis "Python-based build system")
(description
"Waf is a Python-based framework for configuring, compiling and installing
applications.")
(license license:bsd-3)))
(define-public python-pyzmq
(package
(name "python-pyzmq")
(version "25.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pyzmq" version))
(sha256
(base32 "0mw9zf0h9sgn2cchw24vyxgyi2nfpyfacr0mh072hdjx8qii1i40"))
(snippet
#~(begin
(use-modules (guix build utils))
;; The bundled zeromq source code.
(delete-file-recursively "bundled")
;; Delete cythonized files.
(for-each delete-file
(list "zmq/backend/cython/context.c"
"zmq/backend/cython/_device.c"
"zmq/backend/cython/error.c"
"zmq/backend/cython/message.c"
"zmq/backend/cython/_poll.c"
"zmq/backend/cython/_proxy_steerable.c"
"zmq/backend/cython/socket.c"
"zmq/backend/cython/utils.c"
"zmq/backend/cython/_version.c"
"zmq/devices/monitoredqueue.c"))))))
(build-system python-build-system)
(arguments
`(#:configure-flags
(list (string-append "--zmq=" (assoc-ref %build-inputs "zeromq")))
#:phases
(modify-phases %standard-phases
(add-before 'build 'configure
(lambda _
;; Our zeromq package is built with '--enable-drafts'; also
;; enable draft support for pyzmq so the draft test passes.
(setenv "ZMQ_DRAFT_API" "1")))
(add-before 'check 'build-extensions
(lambda _
;; Cython extensions have to be built before running the tests.
(invoke "python" "setup.py" "build_ext" "--inplace")))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv")))))))
(inputs (list zeromq))
(native-inputs
(list pkg-config
python-cython
python-pytest
python-pytest-asyncio
python-tornado))
(home-page "https://github.com/zeromq/pyzmq")
(synopsis "Python bindings for 0MQ")
(description
"PyZMQ is the official Python binding for the ZeroMQ messaging library.")
(license license:bsd-4)))
(define-public python-immutabledict
(package
(name "python-immutabledict")
(version "4.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "immutabledict" version))
(sha256
(base32 "0pvwfasa5l78pi32zk55x5ihpdzkdh4f3xwbfmd7ldyjma0zs0z0"))))
(build-system pyproject-build-system)
(native-inputs
(list python-poetry-core python-pytest))
(home-page "https://github.com/corenting/immutabledict")
(synopsis "Immutable wrapper around dictionaries")
(description
"@dfn{immutabledict} is an immutable wrapper around dictionaries.
It implements the complete mapping interface and can be used as a drop-in
replacement for dictionaries where immutability is desired.")
(license license:expat)))
(define-public python-emoji
(package
(name "python-emoji")
(version "2.12.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "emoji" version))
(sha256
(base32 "1svk94pad8gcvjwd329zmfrw09wakwh6qjvnhf6sa6k92y44i82a"))))
(build-system pyproject-build-system)
(native-inputs (list python-pytest python-typing-extensions))
(home-page "https://github.com/carpedm20/emoji/")
(synopsis "Emoji terminal output for Python")
(description
"This package provides Emoji terminal output for Python. The
entire set of Emoji codes as defined by the Unicode Consortium is supported in
addition to a bunch of aliases.")
(license license:bsd-3)))
;; TODO: Remove this package when upgrading python-gh-md-to-html to the
;; latest version. The latest gh-md-to-html does not build successfully from
;; the PyPI distribution. Let's resolve #72102 while keeping gh-md-to-html at
;; version 1.21.2 from failing.
;; https://issues.guix.gnu.org/72102
;; https://github.com/phseiff/github-flavored-markdown-to-html/issues/73
(define-public python-emoji-for-gh-md-to-html
(package
(inherit python-emoji)
(version "1.6.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "emoji" version))
(sha256
(base32 "0923mpixwq6hdpkgvi4r46alfvf608iq975rb8lnqpq29j71mmjk"))))))
(define-public python-sarge
(package
(name "python-sarge")
(version "0.1.7.post1") ; post release only to correct errors in metadata
(source
(origin
(method url-fetch)
(uri (pypi-uri "sarge" version))
(sha256
(base32 "0g9a53mfnp96877n1yq2jdk1mcv3xm0d93iisvgcn2prdsp45zv4"))))
(build-system python-build-system)
(home-page "https://docs.red-dove.com/sarge/")
(synopsis "Subprocess wrapper with command pipeline functionality")
(description "@code{sarge} is a wrapper for subprocess which provides
command pipeline functionality.")
(license license:bsd-3)))
(define-public python-zipfly
(package
(name "python-zipfly")
(version "6.0.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "zipfly" version))
(sha256
(base32
"1h7g922a8lsqd69j8blgcgg0lcd8kz51b2p4glfqmgx4vi1nkick"))))
(build-system python-build-system)
(home-page "http://github.com/sandes/zipfly")
(synopsis "Zip archive generator")
(description "ZipFly is a zip archive generator. It was created to
generate very large zip archives for immediate sending out to clients, or
for writing large zip archives without memory inflation.")
(license license:bsd-2)))
(define-public python-zipstream-new
(package
(name "python-zipstream-new")
(version "1.1.8")
(source
(origin
(method git-fetch) ; no tests in PyPI release
(uri (git-reference
(url "https://github.com/arjan-s/python-zipstream")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "14vhgg8mcjqi8cpzrw8qzbij2fr2a63l2a8fhil21k2r8vzv92cv"))))
(build-system python-build-system)
(native-inputs
(list python-nose))
(home-page "https://github.com/arjan-s/python-zipstream")
(synopsis "Zipfile generator that takes input files as well as streams")
(description "@code{zipstream.py} is a zip archive generator based on
@code{zipfile.py}. It was created to generate a zip file generator for
streaming. This is beneficial for when you want to provide a downloadable
archive of a large collection of regular files, which would be infeasible
to generate the archive prior to downloading or of a very large file that
you do not want to store entirely on disk or on memory.")
;; No copyright headers in the source. The LICENSE file indicates GPL3.
(license license:gpl3)))
(define-public python-sentry-sdk
(package
(name "python-sentry-sdk")
(version "1.5.1")
(source
(origin
(method git-fetch) ; no tests in PyPI release
(uri (git-reference
(url "https://github.com/getsentry/sentry-python")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "128bm136l5zprr3sqqb8j3d6k5i1fhz853mzvh3w8g0w1dw763mx"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key inputs outputs tests? #:allow-other-keys)
(when tests?
(add-installed-pythonpath inputs outputs)
(invoke "python" "-m" "pytest" "-k"
(string-append
;; This test requires extra dependencies.
"not test_auto_enabling_integrations"
"_catches_import_error"
;; Tests below run pip command.
" and not test_unhandled_exception"
" and not test_timeout_error"
" and not test_performance_no_error"
" and not test_performance_error"
" and not test_traces_sampler_gets_correct"
"_values_in_sampling_context"
" and not test_handled_exception"
;; Tests below require network.
" and not test_crumb_capture"
" and not test_crumb_capture"
" and not test_crumb_capture_hint"
" and not test_httplib_misuse"
;; Fails with IndexError.
" and not test_session_mode_defaults_to"
"_request_mode_in_wsgi_handler"
;; Tests below fail with pytest 7
" and not test_leaks"
" and not test_basic"
" and not test_keyboard_interrupt_is_captured"
" and not test_transaction_with_error"
" and not test_transaction_no_error"
" and not test_start_span_to_start_transaction"
" and not test_tracestate_computation"
" and not test_doesnt_add_new_tracestate_to_transaction_when_none_given"
" and not test_adds_tracestate_to_transaction_when_to_traceparent_called"
" and not test_adds_tracestate_to_transaction_when_getting_trace_context"
" and not test_tracestate_is_immutable_once_set"
" and not test_to_traceparent"
" and not test_to_tracestate"
" and not test_sentrytrace_extraction"
" and not test_tracestate_extraction"
" and not test_iter_headers"
" and not test_tracestate_reinflation"
" and not test_continue_from_headers"
" and not test_memory_usage"
" and not test_transactions_do_not_go_through_before_send"
" and not test_start_span_after_finish"
" and not test_span_trimming"
" and not test_transaction_naming"
" and not test_start_transaction"
" and not test_finds_transaction_on_scope"
" and not test_finds_transaction_when_descendent_span_is_on_scope"
" and not test_finds_orphan_span_on_scope"
" and not test_finds_non_orphan_span_on_scope"
" and not test_circular_references"))))))))
(native-inputs
(list python-django
python-executing
python-gevent
python-jsonschema
python-mock
python-pyrsistent
python-pytest
python-pytest-cov
python-pytest-django
python-pytest-forked
python-pytest-localserver
python-werkzeug))
(propagated-inputs
(list python-certifi python-urllib3))
(home-page "https://github.com/getsentry/sentry-python")
(synopsis "Python SDK for Sentry")
(description "This package provides a Python SDK for the Sentry
application monitoring and error tracking software.")
(license license:bsd-2)))
(define-public python-pep8
;; This package has been renamed to ‘pycodestyle’ and is no longer updated.
;; Its last release (1.7.1) adds only a scary warning to this effect, breaking
;; some dependents' test suites, and nothing more.
(package
(name "python-pep8")
(version "1.7.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pep8" version))
(sha256
(base32
"002rkl4lsn6x2mxmf8ar00l0m8i3mzrc6pnzz77blyksmpsxa4x1"))
(patches (search-patches "python-pep8-stdlib-tokenize-compat.patch"))))
(build-system python-build-system)
(home-page "https://pep8.readthedocs.org/")
(synopsis "Python style guide checker")
(description
"This tools checks Python code against some of the style conventions in
PEP 8.")
(license license:expat)))
(define-public python-pep8-naming
(package
(name "python-pep8-naming")
(version "0.13.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pep8-naming" version))
(sha256
(base32
"1dc0b6xw1cxp01v9zsv4ryk49rfs1lngfpvzsixgp8b7z3ffcf4z"))))
(build-system python-build-system)
(propagated-inputs (list python-flake8))
(home-page "https://github.com/PyCQA/pep8-naming")
(synopsis "Check PEP-8 naming conventions")
(description
"This package provides the @code{pep8-naming} Python module, a
plugin for flake8 to check PEP-8 naming conventions.")
(license license:expat)))
(define-public python-pep517
(package
(inherit python-pep517-bootstrap)
(name "python-pep517")
(arguments
'(#:phases (modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(delete-file "pytest.ini")
(delete-file "tests/test_meta.py")
(if tests?
(invoke "pytest") #t))))))
(native-inputs (list python-mock python-pytest python-testpath))))
(define-public python-pyproject-metadata
(package
(name "python-pyproject-metadata")
(version "0.7.1")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/FFY00/python-pyproject-metadata")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"0yvs59ymz5gdix34a95wxlxvk9bnvjgrzsnmnc3ws7whpfv3yasm"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-packaging))
(native-inputs (list python-pypa-build python-pytest python-tomli))
(home-page "https://github.com/FFY00/python-pyproject-metadata")
(synopsis "Dataclass for PEP 621 metadata")
(description "This project does not implement the parsing of
@file{pyproject.toml} containing PEP 621 metadata. Instead, given a Python
data structure representing PEP 621 metadata (already parsed), it will
validate this input and generate a PEP 643-compliant metadata
file (e.g. @file{PKG-INFO}).")
(license license:expat)))
;; pep621 was renamed to pyproject-metadata.
(define-public python-pep621
(deprecated-package "python-pep621" python-pyproject-metadata))
(define-public python-meson-python
(package
(name "python-meson-python")
(version "0.15.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "meson_python" version))
(sha256
(base32 "0vyjhjabvm41hqijifk33idbdl62i76kfyf884f9rs29rpp77nzx"))))
(build-system meson-build-system)
(propagated-inputs (list python-pyproject-metadata python-tomli))
(home-page "https://github.com/mesonbuild/meson-python")
(synopsis "Meson Python build backend (PEP 517)")
(description "This package provides a PEP 517 build backend that makes
use of the Meson build system.")
(license license:expat)))
(define-public python-pyflakes
(package
(name "python-pyflakes")
(version "2.4.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pyflakes" version))
(sha256
(base32
"0k5jn8jpxni264wxf6cc3xcd1qckc0pww30bsd77mwzdf8l5ra05"))))
(build-system python-build-system)
(home-page "https://github.com/PyCQA/pyflakes")
(synopsis "Passive checker of Python programs")
(description
"Pyflakes statically checks Python source code for common errors.")
(license license:expat)))
(define-public python-mccabe
(package
(name "python-mccabe")
(version "0.6.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "mccabe" version))
(sha256
(base32
"07w3p1qm44hgxf3vvwz84kswpsx6s7kvaibzrsx5dzm0hli1i3fx"))))
(build-system python-build-system)
(native-inputs
(list python-toml python-pytest-bootstrap python-pytest-runner))
(home-page "https://github.com/PyCQA/mccabe")
(synopsis "McCabe checker, plugin for flake8")
(description "This package provides a Flake8 plug-in to compute the McCabe
cyclomatic complexity of Python source code.")
(license license:expat)))
(define-public python-autoflake8
(package
(name "python-autoflake8")
(version "0.4.0")
(source (origin
(method git-fetch) ;for tests
(uri (git-reference
(url "https://github.com/fsouza/autoflake8")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0jx7bkslbhr24yvq60pl39faz2r6g93f1zm1gygswl0rzr5zmgnh"))))
(build-system pyproject-build-system)
(native-inputs
(list python-aiofiles
python-poetry-core
python-pytest
python-pytest-xdist))
(propagated-inputs (list python-pyflakes))
(home-page "https://github.com/fsouza/autoflake8")
(synopsis "Automatically fix issues reported by flake8")
(description "Tool to automatically fix some issues reported by
@command{flake8}.")
(license license:expat)))
(define-public python-flake8
(package
(name "python-flake8")
(version "4.0.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "flake8" version))
(sha256
(base32
"03c7mnk34wfz7a0m5zq0273y94awz69fy5iww8alh4a4v96h6vl0"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-v")))))))
(propagated-inputs
(list python-entrypoints
python-mccabe
python-pycodestyle
python-pyflakes))
(native-inputs (list python-pytest))
(home-page "https://gitlab.com/pycqa/flake8")
(synopsis "The modular source code checker: pep8, pyflakes and co")
(description
"Flake8 is a wrapper around PyFlakes, pep8 and python-mccabe.")
(license license:expat)))
(define-public python-flake8-blind-except
(package
(name "python-flake8-blind-except")
(version "0.2.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "flake8-blind-except" version))
(sha256
(base32 "05nxsxfzfhwsm8gys90228imm2qbnqnw5y8bfqyfngnbkmd5fnpj"))))
(build-system python-build-system)
(arguments
`(#:tests? #f)) ; no tests
(native-inputs (list python-pycodestyle))
(home-page "https://github.com/elijahandrews/flake8-blind-except")
(synopsis "Check for blind @code{except:} statements")
(description "This package provides a flake8 extension that checks for
blind @code{except:} statements.")
(license license:expat)))
(define-public python-flake8-bugbear
(package
(name "python-flake8-bugbear")
(version "20.1.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "flake8-bugbear" version))
(sha256
(base32
"0qiihb242fygzyrfynq913ak7cdmx8mcac9c0zk3y5gv16qf80mx"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(add-before 'check 'disable-test
(lambda _
;; This test fails on slow computers.
(substitute* "tests/test_bugbear.py"
(("def test_does_not_crash_on_any_valid_code")
"def _test_does_not_crash_on_any_valid_code")))))))
(native-inputs
(list python-hypothesis python-hypothesmith))
(propagated-inputs
(list python-attrs python-flake8))
(home-page "https://github.com/PyCQA/flake8-bugbear")
(synopsis
"Flake8 plugin for finding likely bugs and design problems in your program")
(description
"This package contains a plugin for Flake8 finding likely bugs and
design problems in your program. It contains warnings that don't belong
in pyflakes and pycodestyle.")
(license license:expat)))
(define-public python-flake8-continuation
(package
(name "python-flake8-continuation")
(version "1.0.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "flake8-continuation" version))
(sha256
(base32
"0dzaw8jr7yhlabxhrblnrizxx17xa9ngjnbr1kidg5lapq6b9q1y"))))
(build-system python-build-system)
(propagated-inputs
(list python-flake8 python-pycodestyle python-six))
(home-page "https://github.com/planetlabs/flake8-continuation")
(synopsis "Flake8 Line Continuation Plugin")
(description "A Flake8 plugin that checks for the line continuation
style to be in the preferred method according to PEP-8, specifically:
@quotation
The preferred way of wrapping long lines is by using Python's implied
line continuation inside parentheses, brackets and braces. Long lines
can be broken over multiple lines by wrapping expressions in parentheses.
These should be used in preference to using a backslash for line continuation.
@end quotation")
(license license:asl2.0)))
(define-public python-flake8-debugger
(package
(name "python-flake8-debugger")
(version "4.1.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "flake8-debugger" version))
(sha256
(base32 "0h1qlzbxxhjsw6kg3mcml9h8byy77m9a5z06z2dnvqs115b05c2j"))))
(build-system python-build-system)
(arguments
`(#:tests? #f)) ; no tests in PyPI and no setup.py in GitHub
(propagated-inputs
(list python-flake8 python-pycodestyle))
(home-page "https://github.com/jbkahn/flake8-debugger")
(synopsis "@code{ipdb} and @code{pdb} statement checker plugin for flake8")
(description "This package provides a Flake8 plugin that checks for
@code{ipdb} and @code{pdb} imports and set traces, as well as
@code{from IPython.terminal.embed}, @code{import InteractiveShellEmbed}
and @code{InteractiveShellEmbed()()}.")
(license license:expat)))
(define-public python-flake8-implicit-str-concat
(package
(name "python-flake8-implicit-str-concat")
(version "0.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "flake8_implicit_str_concat" version))
(sha256
(base32 "1v0y29xlmbr2q12a4nnpm1dm9aw1mjiys1x8jif4z8c90d63cqm6"))))
(build-system python-build-system)
(arguments
'(#:tests? #f ;no tests
#:phases (modify-phases %standard-phases
(add-after 'unpack 'loosen-requirements
(lambda _
;; Permit newer versions of attrs. Remove for >0.2.
(substitute* "setup.py"
((", <21") "")))))))
(propagated-inputs
(list python-attrs python-more-itertools))
(home-page "https://github.com/keisheiled/flake8-implicit-str-concat")
(synopsis "Flake8 plugin to encourage correct string literal concatenation")
(description
"This is a plugin for the Python code checking tool Flake8 to encourage
correct string literal concatenation.
It looks for style problems like implicitly concatenated string literals on
the same line (which can be introduced by the code formatting tool Black), or
unnecessary plus operators for explicit string literal concatenation.")
(license license:expat)))
(define-public python-flake8-print
(package
(name "python-flake8-print")
(version "4.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "flake8-print" version))
(sha256
(base32 "05k5kkvyk6fdmvnacxfzypk74vbl3pmva13dqg1aljfwnxsc7yjs"))))
(build-system python-build-system)
(propagated-inputs
(list python-flake8 python-pycodestyle python-six))
(home-page "https://github.com/jbkahn/flake8-print")
(synopsis "Print statement checker plugin for Flake8")
(description
"This plugin for Flake8 checks for @code{print} statements in Python
files.")
(license license:expat)))
(define-public python-flake8-pyi
(package
(name "python-flake8-pyi")
(version "20.10.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "flake8-pyi" version))
(sha256
(base32
"0b27n2pmrxcc7nva4wp2i7mrag0fnq0firvhg1ljq593a45b5qyf"))))
(build-system python-build-system)
(propagated-inputs
(list python-attrs python-flake8 python-pyflakes))
(home-page "https://github.com/ambv/flake8-pyi")
(synopsis
"Flake8 plugin that provides specializations for type hinting stub files")
(description
"This package contains a plugin that provides specializations for
type hinting stub files, especially interesting for linting typeshed. It
adds the @file{.pyi} extension to the default value of the @code{--filename}
command-line argument to Flake8. This means stubs are linted by default with
this plugin enabled, without needing to explicitly list every file. It
modifies PyFlakes runs for @file{.pyi} files to defer checking type annotation
expressions after the entire file has been read. This enables support for
first-class forward references that stub files use.")
(license license:expat)))
(define-public python-flake8-pie
(package
(name "python-flake8-pie")
(version "0.5.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "flake8-pie" version))
(sha256
(base32 "0kgipl5gljlp7aa7ykx15pswpzkd0d0qiznihb2z0d9a73181dyd"))))
(build-system python-build-system)
(home-page "https://github.com/sbdchd/flake8-pie")
(synopsis "Flake8 extension that implements lints")
(description
"This package provides a flake8 extension that implements miscellaneous
lints.")
(license license:bsd-2)))
(define-public python-flake8-quotes
(package
(name "python-flake8-quotes")
(version "3.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "flake8-quotes" version))
(sha256
(base32
"0ph5s6lxgpzz4an0ax6s5xjqypqmngwr5b1i0h9pqhzghplic49z"))))
(build-system python-build-system)
(propagated-inputs
(list python-flake8))
(home-page "https://github.com/zheller/flake8-quotes/")
(synopsis "Flake8 lint for quotes")
(description "This package provides a Flake8 lint for quotes.")
(license license:expat)))
(define-public python-flake8-todo
(package
(name "python-flake8-todo")
(version "0.7")
(source
(origin
(method url-fetch)
(uri (pypi-uri "flake8-todo" version))
(sha256
(base32
"05arm0sch3r8248035kilmf01z0mxsahw6vpbbz0d343zy8m8k3f"))))
(build-system python-build-system)
(propagated-inputs
(list python-pycodestyle))
(home-page "https://github.com/schlamar/flake8-todo")
(synopsis "TODO notes checker, plugin for flake8")
(description
"This package provides the @code{flake8-todo} Python module, a
TODO notes checker plugin for flake8.")
(license license:expat)))
(define-public python-flake8-isort
(package
(name "python-flake8-isort")
(version "6.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "flake8-isort" version))
(sha256
(base32 "0gk4q504v42hdzpkndczc0kkwnr85jn1h5pvb561jh65p91r6qyl"))))
(build-system python-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv" "run_tests.py")))))))
(propagated-inputs (list python-flake8 python-isort))
(native-inputs (list python-pytest))
(home-page "https://github.com/gforcada/flake8-isort")
(synopsis "Flake8 plugin integrating isort")
(description "This package provides a flake8 plugin that integrates isort,
extending flake8 so that it can warn about badly sorted Python import
directives.")
(license license:gpl2+)))
(define-public python-autoflake
(package
(name "python-autoflake")
(version "1.3.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "autoflake" version))
(sha256
(base32 "0nzr057dbmgprp4a52ymafdkdd5zp2wcqf42913xc7hhvvdbj338"))))
(build-system python-build-system)
(propagated-inputs
(list python-pyflakes))
(home-page "https://github.com/myint/autoflake")
(synopsis "Removes unused imports and unused variables")
(description
"@code{autoflake} removes unused imports and unused variables from Python
code as reported by @code{pyflakes}.
By default, it only removes unused imports for modules that are part of the
standard library. Removal of unused variables is also disabled by default.
It also removes useless @code{pass} statements.")
(license license:expat)))
(define-public python-mistune
(package
(name "python-mistune")
(version "0.8.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "mistune" version))
(sha256
(base32
"0vkmsh0x480rni51lhyvigfdf06b9247z868pk3bal1wnnfl58sr"))))
(build-system python-build-system)
(native-inputs
(list python-nose python-cython))
(home-page "https://github.com/lepture/mistune")
(synopsis "Markdown parser in pure Python")
(description "This package provides a fast markdown parser in pure
Python.")
(license license:bsd-3)))
;; 2.0 is not released yet, but some packages have started using it.
(define-public python-mistune-next
(package
(inherit python-mistune)
(name "python-mistune-next")
(version "2.0.4")
(source (origin
(method url-fetch)
(uri (pypi-uri "mistune" version))
(sha256
(base32
"024q9l6mgd37wa25w7dhskv1m3zsj5lf0w9cfyx7l9p2adhadq4y"))))
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv")))))))
(native-inputs (list python-pytest))))
(define-public python-markdown
(package
(name "python-markdown")
(version "3.3.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Markdown" version))
(sha256
(base32
"0jbs73nincha8fkfxx267sfxac6pl0ckszjbqbb8gk4dhs8v9d9i"))))
(build-system python-build-system)
(native-inputs
(list python-nose python-pyyaml))
(home-page "https://python-markdown.github.io/")
(synopsis "Python implementation of Markdown")
(description
"This package provides a Python implementation of John Gruber's
Markdown. The library features international input, various Markdown
extensions, and several HTML output formats. A command line wrapper
markdown_py is also provided to convert Markdown files to HTML.")
(license license:bsd-3)))
(define-public python-markdown2
(package
(name "python-markdown2")
(version "2.4.13")
(source
(origin
(method git-fetch) ; no tests data in PyPi package
(uri (git-reference
(url "https://github.com/trentm/python-markdown2")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "0m1wy8i4xmna5b97dvks8cfjmc1wid8pxmd2h82869d0ajva3r6a"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? test-flags #:allow-other-keys)
(when tests?
(with-directory-excursion "test"
(invoke "python" "testall.py"))))))))
(native-inputs
(list python-pygments))
(home-page "https://github.com/trentm/python-markdown2")
(synopsis "Fast and complete Python implementation of Markdown")
(description
"This package provides a fast and complete Python implementation of
Markdown. It was written to closely match the behaviour of the original
Perl-implemented Markdown.pl. It also comes with a number of
extensions (called @code{extras}) for things like syntax coloring, tables,
header-ids.")
(license license:expat)))
(define-public python-mdx-include
(package
(name "python-mdx-include")
(version "1.4.1")
(source (origin
;; Use git, as there are some test files missing from the PyPI
;; release, see https://github.com/neurobin/mdx_include/issues/9
(method git-fetch)
(uri (git-reference
(url "https://github.com/neurobin/mdx_include")
;; Releases are not tagged on github, see
;; https://github.com/neurobin/mdx_include/issues/10
(commit "683e6be7a00a1ef4d673ad0294458fa61bc97286")))
(file-name (git-file-name name version))
(sha256
(base32
"0qpzgln4ybd7pl0m9s19dv60aq9cvwrk7x3yz96kjhcywaa5w386"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(add-before 'check 'disable-test-requiring-network
(lambda _
(substitute* "mdx_include/test/test.py"
(("(\\s+def )test_(cache|config|default)\\(" _ pre post)
(string-append pre "__off__test_" post "("))))))))
(propagated-inputs (list python-cyclic python-markdown python-rcslice))
(home-page "https://github.com/neurobin/mdx_include")
(synopsis "Python Markdown extension to include local or remote files")
(description "Include extension for Python Markdown. It lets you include
local or remote (downloadable) files into your markdown at arbitrary
positions.
This project is motivated by markdown-include and provides the same
functionalities with some extras.")
(license license:bsd-3)))
(define-public python-ptyprocess
(package
(name "python-ptyprocess")
(version "0.5.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ptyprocess" version))
(sha256
(base32
"0ra31k10v3629xq0kdn8lwmfbi97anmk48r03yvh7mks0kq96hg6"))))
(build-system python-build-system)
(native-inputs
(list python-nose))
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _ (invoke "nosetests"))))))
(home-page "https://github.com/pexpect/ptyprocess")
(synopsis "Run a subprocess in a pseudo terminal")
(description
"This package provides a Python library used to launch a subprocess in a
pseudo terminal (pty), and interact with both the process and its pty.")
(license license:isc)))
(define-public python-cram
(package
(name "python-cram")
(version "0.7")
(home-page "https://bitheap.org/cram/")
(source (origin
(method url-fetch)
(uri (list (string-append home-page "cram-"
version ".tar.gz")
(pypi-uri "cram" version)))
(sha256
(base32
"0bvz6fwdi55rkrz3f50zsy35gvvwhlppki2yml5bj5ffy9d499vx"))))
(arguments
'(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch-source
(lambda _
(substitute* (find-files "cram" ".*\\.py$")
;; Replace default shell path.
(("/bin/sh") (which "sh")))
(substitute* (find-files "tests" ".*\\.t$")
(("md5") "md5sum")
(("/bin/bash") (which "bash"))
(("/bin/sh") (which "sh")))
(substitute* "cram/_test.py"
;; This hack works around a bug triggered by substituting
;; the /bin/sh paths. "tests/usage.t" compares the output of
;; "cram -h", which breaks the output at 80 characters. This
;; causes the line showing the default shell to break into two
;; lines, but the test expects a single line...
(("env\\['COLUMNS'\\] = '80'")
"env['COLUMNS'] = '160'"))
(substitute* "Makefile"
;; Recent versions of python-coverage have caused the test
;; coverage to decrease (as of version 0.7). Allow that.
(("--fail-under=100")
"--fail-under=90"))
#t))
(replace 'check
;; The test phase uses the built library and executable.
(lambda* (#:key inputs outputs #:allow-other-keys)
(add-installed-pythonpath inputs outputs)
(setenv "PATH" (string-append (getenv "PATH") ":"
(assoc-ref outputs "out") "/bin"))
(invoke "make" "test"))))))
(build-system python-build-system)
(native-inputs
(list python-coverage which))
(synopsis "Simple testing framework for command line applications")
(description
"Cram is a functional testing framework for command line applications.
Cram tests look like snippets of interactive shell sessions. Cram runs each
command and compares the command output in the test with the command’s actual
output.")
(license license:gpl2+)))
(define-public python-crccheck
(package
(name "python-crccheck")
(version "1.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "crccheck" version))
(sha256
(base32 "15psg7wjfbpmmry54ffwg6pg63mnv7mkwmb0a7884axnr8qj55j5"))))
(build-system python-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv")))))))
(native-inputs (list python-pytest))
(home-page "https://sourceforge.net/projects/crccheck/")
(synopsis "Calculation library for CRCs and checksums")
(description "@code{crccheck} is a calculation library for CRCs and
checksums. It implement more than a hundred checksum routines.")
(license license:gpl3+)))
(define-public python-crashtest
(package
(name "python-crashtest")
(version "0.3.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "crashtest" version))
(sha256
(base32 "1p9p7mn8x2j9psc4jxab98897v4i9s4fliyfw8rp8v4bx1n7pjj2"))))
(build-system python-build-system)
(home-page "https://github.com/sdispater/crashtest")
(synopsis "Manage Python errors with ease")
(description
"Python library that makes exceptions handling and inspection easier.")
(license license:expat)))
(define-public python-stdlib-list
(package
(name "python-stdlib-list")
(version "0.8.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "stdlib-list" version))
(sha256
(base32
"17vdn4q0sdlndc2fr9svapxx6366hnrhkn0fswp1xmr0jxqh7rd1"))))
(build-system python-build-system)
(arguments
`(#:tests? #f)) ; Tests require more dependencies.
(native-inputs
(list python-sphinx))
(home-page "https://github.com/jackmaney/python-stdlib-list")
(synopsis "Python Standard Libraries")
(description "This package contains a list of Python Standard Libraries.")
(license license:expat)))
(define-public python-stopit
(package
(name "python-stopit")
(version "1.1.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "stopit" version))
(sha256
(base32 "0vcrcvky249q4rbgmwf18mwmnypfk8jpn4h6knyjf86r7xc9rwzp"))))
(build-system python-build-system)
(arguments '(#:tests? #f)) ;there are none
(home-page "https://pypi.python.org/pypi/stopit")
(synopsis "Timeout control decorator and context managers")
(description
"Raise asynchronous exceptions in other threads, control the timeout of
blocks or callables with two context managers and two decorators.")
(license license:expat)))
(define-public python-timeout-decorator
(package
(name "python-timeout-decorator")
(version "0.5.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "timeout-decorator" version))
(sha256
(base32
"1mxk2qyydhzncm93z08kvj5ssxq3fr2n7pkrrji28nqwvdc2ybva"))))
(build-system python-build-system)
(home-page "https://github.com/pnpnpn/timeout-decorator")
(synopsis "Timeout decorator")
(description "This package provides a decorator that raises an error
when an operation takes longer than expected.")
(license license:expat)))
(define-public python-straight-plugin
(package
(name "python-straight-plugin")
(version "1.4.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "straight.plugin" version))
(sha256
(base32
"069pjll4383p4kkgvcc40hgyvf79j2wdbpgwz77yigzxksh1gj62"))))
(build-system python-build-system)
(home-page "https://github.com/ironfroggy/straight.plugin")
(synopsis "Simple namespaced plugin facility")
(description "Straight Plugin provides a type of plugin you can create from
almost any existing Python modules, and an easy way for outside developers to
add functionality and customization to your projects with their own plugins.")
(license license:expat)))
(define-public python-strenum
(package
(name "python-strenum")
(version "0.4.15")
(source
(origin
(method url-fetch)
(uri (pypi-uri "StrEnum" version))
(sha256
(base32 "1zrfr1shin5wyfnfxc7jpk013594wasrp4ni9l70fhjlf2mvb3w7"))))
(build-system pyproject-build-system)
(arguments (list #:tests? #false)) ;there are none.
(home-page "https://github.com/irgeek/StrEnum")
(synopsis "Enum that inherits from str")
(description "StrEnum is a Python @code{enum.Enum} that inherits from
@code{str} to complement @code{enum.IntEnum} in the standard library.")
(license license:expat)))
(define-public python-pysendfile
(package
(name "python-pysendfile")
(version "2.0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pysendfile" version))
(sha256
(base32 "05qf0m32isflln1zjgxlpw0wf469lj86vdwwqyizp1h94x5l22ji"))))
(build-system python-build-system)
(arguments
(list
#:phases #~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(setenv "HOME" "/tmp")
(invoke "make" "test")))))))
(home-page "https://github.com/giampaolo/pysendfile")
(synopsis "Python interface to sendfile(2)")
(description "The @{pysendfile} Python library provides an interface to
the @code{sendfile(2)} system call.")
(license license:expat)))
(define-public python-pyftpdlib
(package
(name "python-pyftpdlib")
(version "1.5.7")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pyftpdlib" version))
(sha256
(base32 "0vk5gcx4svjrpm014ykwxmijqihgb4ha17kb3yphk0nv6x0wx8vy"))))
(build-system pyproject-build-system)
;; Using Pytest instead of the Makefile causes the command line tests to
;; fail on unknown Pytest arguments.
(arguments (list #:test-flags #~(list "-k" "not TestCommandLineParser")))
(native-inputs (list python-psutil python-pytest))
(propagated-inputs (list python-pyopenssl python-pysendfile))
(home-page "https://github.com/giampaolo/pyftpdlib/")
(synopsis "Asynchronous and scalable Python FTP server library")
(description "The Python FTP server library provides a high-level
interface to write efficient, scalable and asynchronous FTP servers with
Python. It is the most complete @url{http://www.faqs.org/rfcs/rfc959.html,
RFC-959} FTP server implementation available for Python, and has the following
traits:
@itemize
@item
It is lightweight, fast and scalable.
@item
It uses the @code{sendfile(2)} system call for uploads.
@item
It uses @code{epoll}, @code{kqueue} and @code{select} to handle concurrency
asynchronously.
@item
It supports FTPS (@url{http://tools.ietf.org/html/rfc4217, RFC-4217}),
IPv6 (RFC-2428), Unicode file names (@url{http://tools.ietf.org/html/rfc2640,
RFC-2640}) and MLSD/MLST commands (RFC-3659).
@item
It has a flexible system of @samp{authorizers} able to manage both
@samp{virtual} and @samp{real} users.
@end itemize")
(license license:expat)))
(define-public python-fs
(package
(name "python-fs")
(version "2.4.16")
(source
(origin
(method url-fetch)
(uri (pypi-uri "fs" version))
(sha256
(base32 "04ykd7q49qgv13hl2n71lzihs2c9099r50lmd85vgx0k2bawg5xf"))))
(build-system python-build-system)
(arguments
(list
#:tests? (and (not (%current-target-system))
(->bool (this-package-native-input "python-pytest")))
#:phases #~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(setenv "HOME" "/tmp")
(invoke "pytest" "-m" "not slow")))))))
(propagated-inputs
(list python-appdirs python-pytz python-six))
(native-inputs
;; 'python-pyftpdlib' is needed for tests but it indirectly depends Rust,
;; which is currently unavailable on aarch64-linux. Remove all the test
;; dependencies in that case.
(if (and (not (%current-target-system))
(supported-package? python-pyftpdlib))
(list python-mock python-parameterized python-pyftpdlib
python-pytest)
'()))
(home-page "https://github.com/PyFilesystem/pyfilesystem2/")
(synopsis "File system abstraction layer for Python")
(description "PyFilesystem's @code{FS} object is a file system abstraction
sharing similarities with Python's own @code{file} object for single files.
It allows opening all the files under a given directory recursively, as a
single @code{FS} object. This enables, for example, counting the combined
number of lines in the contained files easily.")
(license license:expat)))
;;; Tests are left out in the main package to avoid cycles.
(define-public python-fonttools-minimal
(hidden-package
(package
(name "python-fonttools-minimal")
(version "4.39.3")
(source (origin
(method url-fetch)
(uri (pypi-uri "fonttools" version ".zip"))
(sha256
(base32
"1msibi5cmi5znykkg66dq7xshl07lkqjxhrz5hcipqvlggsvjd4j"))))
(build-system python-build-system)
(native-inputs
(list unzip))
(arguments '(#:tests? #f))
(home-page "https://github.com/fonttools/fonttools")
(synopsis "Tools to manipulate font files")
(description
"FontTools/TTX is a library to manipulate font files from Python. It
supports reading and writing of TrueType/OpenType fonts, reading and writing
of AFM files, reading (and partially writing) of PS Type 1 fonts. The package
also contains a tool called “TTX” which converts TrueType/OpenType fonts to and
from an XML-based format.")
(license license:expat))))
(define-public python-fonttools
(let ((base python-fonttools-minimal))
(package/inherit base
(name "python-fonttools")
(arguments
(substitute-keyword-arguments (package-arguments base)
((#:tests? _ #f)
(not (%current-target-system)))
((#:phases phases '%standard-phases)
`(modify-phases ,phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv"
"-k"
;; XXX: These tests need .trm files that are
;; not shipped with the PyPI release.
(format #f "not ~a"
(string-join
'("test_read_fontdimens_mathsy"
"test_read_fontdimens_mathex"
"test_read_fontdimens_vanilla"
"test_read_boundary_char"
"fontTools.tfmLib"
;; The MtiTest tests fail for unknown
;; reasons (see:
;; https://github.com/fonttools/
;; fonttools/issues/3078)
"MtiTest")
" and not "))))))))))
(native-inputs
(modify-inputs (package-native-inputs base)
(append python-pytest)))
(propagated-inputs
(list python-brotli
python-fs
python-lxml
python-lz4
python-scipy
python-unicodedata2
python-zopfli))
(properties (alist-delete 'hidden? (package-properties base))))))
(define-public python-ly
(package
(name "python-ly")
(version "0.9.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri name version))
(sha256
(base32
"0x98dv7p8mg26p4816yy8hz4f34zf6hpnnfmr56msgh9jnsm2qfl"))))
(build-system python-build-system)
(arguments
;; FIXME: Some tests need network access.
'(#:tests? #f))
(synopsis "Tool and library for manipulating LilyPond files")
(description "This package provides a Python library to parse, manipulate
or create documents in LilyPond format. A command line program ly is also
provided that can be used to do various manipulations with LilyPond files.")
(home-page "https://pypi.org/project/python-ly/")
(license license:gpl2+)))
(define-public python-appdirs
(package
(name "python-appdirs")
(version "1.4.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "appdirs" version))
(sha256
(base32
"0hfzmwknxqhg20aj83fx80vna74xfimg8sk18wb85fmin9kh2pbx"))))
(build-system python-build-system)
(home-page "https://github.com/ActiveState/appdirs")
(synopsis
"Determine platform-specific dirs, e.g. a \"user data dir\"")
(description
"This module provides a portable way of finding out where user data
should be stored on various operating systems.")
(license license:expat)))
(define-public python-google-pasta
(package
(name "python-google-pasta")
(version "0.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "google-pasta" version))
(sha256
(base32 "0vm1r1jlaiagj0l9yf7j6zn9w3733dr2169911c0svgrr3gwiwn9"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-six))
(home-page "https://github.com/google/pasta")
(synopsis "pasta is an AST-based Python refactoring library")
(description "This package provides \"pasta\", an AST-based Python
refactoring library.")
(license license:asl2.0)))
(define-public python-gorilla
(package
(name "python-gorilla")
(version "0.3.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "gorilla" version))
(sha256
(base32
"0b40blcp6fih4nvqbilra4qw1dfccv1ahjmr41ac4d9rjadqkcpy"))))
(build-system python-build-system)
(home-page "https://github.com/christophercrouzet/gorilla")
(synopsis "Convenient monkey patching with Python")
(description
"Gorilla is a Python library that provides a convenient approach to
monkey patching. Monkey patching is the process of modifying module and
class attributes at runtime with the purpose of replacing or extending
third-party code.")
(license license:expat)))
(define-public python-llfuse
(package
(name "python-llfuse")
(version "1.4.4")
(source (origin
(method url-fetch)
(uri (pypi-uri "llfuse" version))
(sha256
(base32
"1jb4c9avvb0v3830xlbj1r9kj05i98vv6nq05105ppg57y7lq14j"))))
(build-system python-build-system)
(inputs
(list fuse-2 attr))
(native-inputs
(list pkg-config python-pytest))
(synopsis "Python bindings for FUSE")
(description
"Python-LLFUSE is a set of Python bindings for the low level FUSE API.")
(home-page "https://bitbucket.org/nikratio/python-llfuse/")
(license license:lgpl2.0+)))
(define-public python-msgpack
(package
(name "python-msgpack")
(version "1.0.4")
(source (origin
(method url-fetch)
(uri (pypi-uri "msgpack" version))
(sha256
(base32
"0pqzy1zclyhd42gfibhkcqymbspy5a6v421g87mh40h3iz0nkn7m"))))
(build-system python-build-system)
(arguments
`(#:modules ((guix build utils)
(guix build python-build-system)
(ice-9 ftw)
(srfi srfi-1)
(srfi srfi-26))
#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "pytest" "-v" "test"))))))
(native-inputs
(list python-pytest))
(synopsis "MessagePack (de)serializer")
(description "MessagePack is a fast, compact binary serialization format,
suitable for similar data to JSON. This package provides CPython bindings for
reading and writing MessagePack data.")
(home-page "https://pypi.org/project/msgpack/")
(license license:asl2.0)))
;; This msgpack library's name changed from "python-msgpack" to "msgpack" with
;; release 0.5. Some packages like poetry still call it by the old name for now.
;; <https://bugs.gnu.org/30662>
(define-public python-msgpack-transitional
(package
(inherit python-msgpack)
(name "python-msgpack-transitional")
(version "0.5.6")
(source (origin
(method url-fetch)
(uri (pypi-uri "msgpack" version))
(sha256
(base32
"1hz2dba1nvvn52afg34liijsm7kn65cmn06dl0xbwld6bb4cis0f"))))
(arguments
(substitute-keyword-arguments (package-arguments python-msgpack)
((#:phases phases)
`(modify-phases ,phases
(add-after 'unpack 'configure-transitional
(lambda _
;; Keep using the old name.
(substitute* "setup.py"
(("TRANSITIONAL = False")
"TRANSITIONAL = 1"))
;; This old version is not compatible with Python 3.9
(substitute* '("test/test_buffer.py" "test/test_extension.py")
((".tostring\\(") ".tobytes("))
(substitute* '("test/test_buffer.py" "test/test_extension.py")
((".fromstring\\(") ".frombytes("))
#t))))))))
(define-public python-netaddr
(package
(name "python-netaddr")
(version "0.8.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "netaddr" version))
(sha256
(base32
"0hx2npi0wnhwlcybilgwlddw6qffx1mb7a3sj4p9s7bvl33mgk6n"))))
(build-system python-build-system)
(arguments `(#:tests? #f)) ;; No tests.
(home-page "https://github.com/drkjam/netaddr/")
(synopsis "Pythonic manipulation of network addresses")
(description
"A Python library for representing and manipulating IPv4, IPv6, CIDR, EUI
and MAC network addresses.")
(license license:bsd-3)))
(define-public python-openstep-plist
(package
(name "python-openstep-plist")
(version "0.3.0")
(home-page "https://github.com/fonttools/openstep-plist")
(source (origin
(method git-fetch)
(uri (git-reference
(url home-page)
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1rxjgzh0p069ncsr2986rn32vhdqyq35irbqg2559jh18456mkca"))))
(build-system python-build-system)
(arguments
(list #:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'pretend-version
(lambda _
(setenv "SETUPTOOLS_SCM_PRETEND_VERSION"
#$(package-version this-package))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv")))))))
(native-inputs
(list python-cython python-pytest python-setuptools-scm))
(synopsis "OpenStep plist parser and writer")
(description
"This package provides a parser for the \"old style\" OpenStep property
list format (also known as ASCII plist), written in Cython.")
(license license:expat)))
(define-public python-wrapt
(package
(name "python-wrapt")
(version "1.11.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "wrapt" version))
(sha256
(base32
"1q81762dgsgrd12f8qc39zk8s5wll3m5xc32jdmlf6cls4gh4njn"))))
(build-system python-build-system)
(arguments
;; Tests are not included in the tarball, they are only available in the
;; git repository.
`(#:tests? #f))
(home-page "https://github.com/GrahamDumpleton/wrapt")
(synopsis "Module for decorators, wrappers and monkey patching")
(description
"The aim of the wrapt module is to provide a transparent object proxy for
Python, which can be used as the basis for the construction of function
wrappers and decorator functions.")
(license license:bsd-2)))
(define-public python-commentjson
(package
(name "python-commentjson")
(version "0.9.0")
(source (origin
;; The PyPI release is missing some test files.
(method git-fetch)
(uri (git-reference
(url "https://github.com/vaidik/commentjson")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"01iscgrc6bkyrxbzmf46csbf9c0n7g6dygdmxs3fq8fkzrrciybl"))))
(build-system python-build-system)
(arguments
`(#:modules ((guix build python-build-system)
(guix build utils)
(ice-9 ftw)
(ice-9 textual-ports))
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'relax-requirements
(lambda _
(substitute* "setup.py"
(("lark-parser>=0.7.1,<0.8.0")
"lark-parser>=0.7.1"))))
(add-after 'unpack 'delete-unspported-tests
;; Some tests rely on the 'test' module of Python itself,
;; which is not available with the Python package in Guix;
;; remove them.
(lambda _
;; XXX: Copied from (guix build dub-build-system).
(define (grep string file-name)
(string-contains (call-with-input-file file-name get-string-all)
string))
(with-directory-excursion "commentjson/tests/test_json"
(let* ((dot? (lambda (x) (member x '("." ".."))))
(test-files (scandir "." (negate dot?))))
(for-each delete-file
(filter (lambda (f) (grep "from test." f))
test-files)))))))))
(propagated-inputs
(list python-lark-parser))
(native-inputs
(list python-six))
(home-page "https://github.com/vaidik/commentjson")
(synopsis "Python library for adding comments to JSON files")
(description "Comment JSON is a Python package that helps you create JSON
files with Python and JavaScript style inline comments. Its API is very
similar to the Python standard library's @code{json} module.")
(license license:expat)))
(define-public python-resolvelib
(package
(name "python-resolvelib")
(version "0.7.1")
(source
(origin
;; Tests are missing from the PyPI release.
(method git-fetch)
(uri (git-reference
(url "https://github.com/sarugaku/resolvelib")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"1fqz75riagizihvf4j7wc3zjw6kmg1dd8sf49aszyml105kb33n8"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? inputs outputs #:allow-other-keys)
(when tests?
(add-installed-pythonpath inputs outputs)
(invoke "pytest")))))))
(native-inputs
(list python-commentjson python-packaging python-pytest))
(home-page "https://github.com/sarugaku/resolvelib")
(synopsis "Abstract dependencies resolver")
(description "The ResolveLib library provides a @code{Resolver} class that
includes dependency resolution logic.")
(license license:isc)))
(define-public python-commonmark
(package
(name "python-commonmark")
(version "0.9.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "commonmark" version))
(sha256
(base32 "0q7d39lm8kcingpmykk5r959hrwwj6v2icyw3mihczxyb749sbs5"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key inputs outputs #:allow-other-keys)
(add-installed-pythonpath inputs outputs)
(invoke "python" "setup.py" "test"))))))
(home-page "https://github.com/readthedocs/commonmark.py")
(synopsis "Python parser for the CommonMark Markdown spec")
(description
"This module is a pure Python port of jgm's @code{commonmark.js}, a
Markdown parser and renderer for the CommonMark specification, using only
native modules.")
(license license:bsd-3)))
(define-public python-xlrd
(package
(name "python-xlrd")
(version "2.0.1")
(source (origin
;; The tests are not included in the PyPI archive.
(method git-fetch)
(uri (git-reference
(url "https://github.com/python-excel/xlrd")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"170asszffvf6rh5w169ic4h5kxgjkmdl3060vw737d4g1qfifvzz"))))
(build-system python-build-system)
(native-inputs
(list python-pytest))
(home-page "https://www.python-excel.org/")
(synopsis "Library for extracting data from Excel files")
(description "This package provides a library to extract data from
spreadsheets using Microsoft Excel proprietary file formats @samp{.xls} and
@samp{.xlsx} (versions 2.0 onwards). It has support for Excel dates and is
Unicode-aware. It is not intended as an end-user tool.")
(license license:bsd-3)))
;;; Note: this package is unmaintained since 2018 (archived on GitHub).
(define-public python-xlwt
(package
(name "python-xlwt")
(version "1.3.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "xlwt" version))
(sha256
(base32 "123c2pdamshkq75wwvck8fq0cjq1843xd3x9qaiz2a4vg9qi56f5"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(setenv "GUIX_PYTHONPATH"
(string-append (getcwd) "/build/lib:"
(getenv "GUIX_PYTHONPATH")))
(invoke "nosetests" "-v")))))))
(native-inputs
`(("nose" ,python-nose)))
(home-page "https://www.python-excel.org/")
(synopsis "Library for creating spreadsheet Excel files")
(description "@code{xlwt} is a library for writing data and formatting
information to older Excel files (i.e. .xls). The package itself is pure
Python with no dependencies on modules or packages outside the standard Python
distribution. It is not intended as an end-user tool.")
(license license:bsd-3)))
(define-public python-immutables
(package
(name "python-immutables")
(version "0.18")
(source
(origin
(method url-fetch)
(uri (pypi-uri "immutables" version))
(sha256
(base32 "1x4cinh0xbl6p6p2yfm2s07mxxy3lf0zzai9gqpydk4482bwfdjk"))))
(build-system python-build-system)
(native-inputs (list python-mypy python-pytest))
(home-page "https://github.com/MagicStack/immutables")
(synopsis "High-performance immutable mapping type for Python")
(description
"An immutable mapping type for Python. The underlying datastructure is a
Hash Array Mapped Trie (HAMT) used in Clojure, Scala, Haskell, and other
functional languages.")
(license license:asl2.0)))
(define-public python-prettytable
(package
(name "python-prettytable")
(version "3.3.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "prettytable" version))
(sha256
(base32
"1c599w31i2ndzbkn85xwsgv9sd2j16r56dl922w4jh3rs97vb3hi"))))
(build-system python-build-system)
(arguments
(list #:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv")))))))
(native-inputs
(list python-pytest
python-pytest-lazy-fixture
python-setuptools-scm))
(propagated-inputs (list python-wcwidth))
(home-page "https://github.com/jazzband/prettytable")
(synopsis "Display tabular data in an ASCII table format")
(description
"A library designed to represent tabular data in visually appealing ASCII
tables. PrettyTable allows for selection of which columns are to be printed,
independent alignment of columns (left or right justified or centred) and
printing of sub-tables by specifying a row range.")
(license license:bsd-3)))
(define-public python-rtf-tokenize
(package
(name "python-rtf-tokenize")
(version "1.0.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "rtf_tokenize" version))
(sha256
(base32
"026njb9iwznycda83bln3gfivcnzdz6vy8y86xvbsy84s28g6gaw"))))
(build-system python-build-system)
(native-inputs (list python-pytest))
(home-page "https://github.com/benoit-pierre/rtf_tokenize")
(synopsis "Simple RTF tokenizer")
(description "This package is a simple RTF tokenizer.")
(license license:gpl2+)))
(define-public python-curio
(package
(name "python-curio")
(version "1.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "curio" version))
(sha256
(base32 "045wwg16qadsalhicbv21p14sj8i4w0l57639j7dmdqbb4p2225g"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key inputs outputs tests? #:allow-other-keys)
(when tests?
(add-installed-pythonpath inputs outputs)
(invoke "pytest" "-vv" "-k"
(string-append
;; Tries to open an outgoing connection.
"not test_ssl_outgoing "
;; This test fails since Python 3.9.9 (see:
;; https://github.com/dabeaz/curio/issues/347).
"and not test_timeout"))))))))
(native-inputs
(list python-pytest))
(home-page "https://github.com/dabeaz/curio")
(synopsis "Coroutine-based library for concurrent Python")
(description
"Curio is a coroutine-based library for concurrent Python systems
programming. It provides standard programming abstractions such as as
tasks, sockets, files, locks, and queues.")
(license license:bsd-3)))
(define-public python-tables
(package
(name "python-tables")
(version "3.7.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "tables" version))
(sha256
(base32
"1zp1qmas4pgcag9sn0gwd40c6ibn9bg056d6ckjq7agjsrx8hap9"))
(modules '((guix build utils)))
(snippet
'(begin
;; Remove pre-compiled .pyc files from source.
(for-each delete-file-recursively
(find-files "." "__pycache__" #:directories? #t))
(for-each delete-file (find-files "." "\\.pyc$"))
(for-each delete-file
(list "tables/_comp_bzip2.c"
"tables/_comp_lzo.c"
"tables/hdf5extension.c"
"tables/indexesextension.c"
"tables/linkextension.c"
"tables/lrucacheextension.c"
"tables/tableextension.c"
"tables/utilsextension.c"))))))
(build-system python-build-system)
(arguments
(list
#:phases
;; FIXME: python-build-system does not pass configure-flags to "build"
;; or "check", so we must override the build and check phases.
#~(modify-phases %standard-phases
(add-after 'unpack 'use-gcc
(lambda _
(substitute* "setup.py"
(("lib_dirs = \\[\\]")
(string-append "lib_dirs = ["
"'" #$(this-package-input "hdf5") "/lib',"
"'" #$(this-package-input "bzip2") "/lib',"
"'" #$(this-package-input "c-blosc") "/lib',"
"]"))
(("^( +)compiler = new_compiler\\(\\)" line indent)
(string-append line
"\n"
indent
"compiler.set_executables(compiler='gcc',"
"compiler_so='gcc',"
"linker_exe='gcc',"
"linker_so='gcc -shared')")))))
(add-after 'unpack 'disable-tuning
(lambda _
(substitute* "setup.py"
(("cpu_flags = .*")
"cpu_flags = ['sse2']\n"))))
(replace 'build
(lambda* (#:key inputs #:allow-other-keys)
(invoke "python" "setup.py" "build"
(string-append "--hdf5="
(assoc-ref inputs "hdf5")))))
(replace 'check
(lambda* (#:key inputs #:allow-other-keys)
(invoke "python" "setup.py" "check"
(string-append "--hdf5="
(assoc-ref inputs "hdf5"))))))))
(propagated-inputs
(list python-numexpr python-numpy python-packaging
python-py-cpuinfo))
(native-inputs
(list python-cython pkg-config))
(inputs
(list c-blosc hdf5-1.10 bzip2 lzo zlib))
(home-page "https://www.pytables.org/")
(synopsis "Hierarchical datasets for Python")
(description "PyTables is a package for managing hierarchical datasets and
designed to efficiently cope with extremely large amounts of data.")
(license license:bsd-3)))
(define-public python-tasklogger
(package
(name "python-tasklogger")
(version "1.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "tasklogger" version))
(sha256
(base32 "1901mibcp6aiyjy8afnybrxnb0dkbdxlbvjqbr3gginlw7dr18xh"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-deprecated))
(native-inputs (list python-coverage python-coveralls python-nose2
python-numpy))
(home-page "https://github.com/scottgigante/tasklogger")
(synopsis "Extension to the core Python logging library")
(description "This package provides an extension to the core Python
logging library for logging the beginning and completion of tasks and
subtasks.")
(license license:gpl2)))
(define-public python-sniffio
(package
(name "python-sniffio")
(version "1.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "sniffio" version))
(sha256
(base32 "1pnkvi6wvn4qd37y69n1ls6n8l63gfmn3pvb1jb50gqxxkn6wrn4"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "pytest" "-vv"))))))
(native-inputs
(list python-curio python-pytest python-pytest-cov))
(home-page "https://github.com/python-trio/sniffio")
(synopsis "Detect which async library a program is running under")
(description "This package detects which async library a program is
running under. It supports multiple async I/O packages, like Trio, and
asyncio.")
;; Either license applies.
(license (list license:expat license:asl2.0))))
(define-public python-snuggs
(package
(name "python-snuggs")
(version "1.4.7")
(source (origin
(method url-fetch)
(uri (pypi-uri "snuggs" version))
(sha256
(base32
"0yv1wayrw9g6k0c2f721kha7wsv0s1fdlxpf5x7f34iqzq9z272h"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-numpy python-pyparsing))
(native-inputs (list python-hypothesis python-pytest))
(home-page "https://github.com/mapbox/snuggs")
(synopsis "Snuggs are S-expressions for Numpy")
(description "Snuggs are S-expressions for Numpy.")
(license license:expat)))
(define-public python-pytest-black
(package
(name "python-pytest-black")
(version "0.3.12")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pytest-black" version))
(sha256
(base32
"19bmbcnaq02md8nnj6pywri3vps8sxnhysbfy386qkbn9w09ncqx"))))
(build-system python-build-system)
(propagated-inputs
(list python-pytest python-black python-toml))
(native-inputs
(list python-setuptools-scm))
(home-page "https://github.com/shopkeep/pytest-black")
(synopsis "Pytest plugin to enable format checking with black")
(description
"This package provides a pytest plugin to enable format checking with the
Python code formatter \"black\".")
(license license:expat)))
(define-public python-geojson
(package
(name "python-geojson")
(version "3.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "geojson" version))
(sha256
(base32 "1b5df7skx3906046j12yjv8gdbcy17q9y3lbqbpmi83yf90gm9sq"))))
(build-system pyproject-build-system)
(home-page "https://github.com/jazzband/geojson")
(synopsis "Python bindings and utilities for GeoJSON")
(description
"This package provides Python bindings and utilities for
@uref{http://geojson.org/, GeoJSON}, a format for encoding geographic data
structures.")
(license license:bsd-3)))
;; pyowm only accepts a version less than version 3.
(define-public python-geojson-for-pyowm
(package
(inherit python-geojson)
(version "2.5.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "geojson" version))
(sha256
(base32 "12k5bzqskvq3gqzkryarhdjl0df47y5k9cf8r3clasi2wjnbfjvf"))))
(arguments
;; https://github.com/jazzband/geojson/issues/175
(list #:tests? #f))))
(define-public wfetch
(let ((commit "e1cfa37814aebc9eb56ce994ebe877b6a6f9a715")
(revision "2"))
(package
(name "wfetch")
(version (git-version "0.1-pre" revision commit))
(home-page "https://github.com/Gcat101/Wfetch")
(source
(origin
(method git-fetch)
(uri (git-reference (url home-page)
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32 "1dmr85plx8zr6s14ym3r32g6crwxghkval5a24ah90ijx4dbn5q5"))))
(build-system python-build-system)
(arguments
`(#:use-setuptools? #f ; no setup.py
#:tests? #f ; no test suite
#:phases
(modify-phases %standard-phases
(delete 'build)
(replace 'install
(lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
(bin (string-append out "/bin"))
(share (string-append out "/share")))
(mkdir-p share)
(substitute* "wfetch/wfetch.py"
(("os.sep, 'opt', 'wfetch'") (string-append "'" share "'")))
; The documentation expects the executable to be named
; 'wfetch', not 'wfetch.py'.
(rename-file "wfetch/wfetch.py" "wfetch/wfetch")
(install-file "wfetch/wfetch" bin)
(copy-recursively "wfetch/icons" share)))))))
(inputs (list python-pyowm python-fire python-termcolor python-requests))
(synopsis "Command-line tool to display weather info")
(description
"This package provides a tool similar to Neofetch/pfetch, but for
weather: it can display the weather condition, temperature, humidity, etc.
To use it, you must first run:
@example
export WEATHER_CLI_API=@var{your OpenWeatherMap API key}
@end example\n")
(license license:gpl3+))))
(define-public python-get-version
(package
(name "python-get-version")
(version "2.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "get_version" version))
(sha256
(base32
"1g15jyx33vkxavv9hwv275cs4g9bp2i1y942raw3fxamq8kbaml1"))))
(build-system python-build-system)
(propagated-inputs
(list python-pygments
python-pytest
python-pytest-black
python-pytest-cov
python-setuptools
python-testpath))
(home-page "https://github.com/flying-sheep/get_version")
(synopsis "Version helper in the spirit of versioneer")
(description
"This package provides a version helper that lets you automatically use
the latest @code{vX.X.X} Git tag as the version in your Python package. It
also supports getting the version from Python source distributions or, once
your package is installed, via @code{pkg_resources} (part of
@code{setuptools}).")
(license license:gpl3+)))
(define-public python-filetype
(package
(name "python-filetype")
(version "1.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "filetype" version))
(sha256
(base32 "1nxa91szfbhhbhvdwj06jz8zghzwgb9lf0v6aj61vx2b8zb6rdb6"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key inputs outputs tests? #:allow-other-keys)
(when tests?
(add-installed-pythonpath inputs outputs)
(invoke "python" "-m" "pytest" "-k"
(string-append
;; Both tests fail with FileNotFoundError.
"not test_infer_zip_from_disk"
" and not test_infer_tar_from_disk"))))))))
(native-inputs
(list python-pytest python-pytest-benchmark))
(home-page "https://github.com/h2non/filetype.py")
(synopsis "Infer file type and MIME type of any file/buffer")
(description "@code{filetype} is a small and dependency free Python
package to infer file type and MIME type checking the magic numbers
signature of a file or buffer.")
(license license:expat)))
(define-public python-cachelib
(package
(name "python-cachelib")
(version "0.4.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "cachelib" version))
(sha256
(base32 "0p4chkvbvffcllsny5rpzmsq2vyr24ql3kzif4ha0fxp3fp7vqk8"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? inputs outputs #:allow-other-keys)
(when tests?
(add-installed-pythonpath inputs outputs)
(invoke "pytest")))))))
(native-inputs
(list python-pytest python-pytest-xprocess))
(home-page "https://github.com/pallets/cachelib")
(synopsis "Collection of cache libraries")
(description "Cachelib is a library extracted from @code{werkzeug} which
provides a collection of cache libraries in the same API interface.")
(license license:bsd-3)))
(define-public python-pylru
(package
(name "python-pylru")
(version "1.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pylru" version))
(sha256
(base32 "15yj46307sw703vjfkgnr04dqvaicmfcj0hc6yrciildp55r6bs9"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key inputs outputs tests? #:allow-other-keys)
(when tests?
(add-installed-pythonpath inputs outputs)
(invoke "python" "test.py")))))))
(home-page "https://github.com/jlhutch/pylru")
(synopsis "Least recently used (LRU) cache implementation")
(description
"Pylru implements a true LRU cache along with several support classes.
Pylru provides a cache class with a simple dict interface. It also provides
classes to wrap any object that has a dict interface with a cache. Both
write-through and write-back semantics are supported. Pylru also provides
classes to wrap functions in a similar way, including a function decorator.")
(license license:gpl2+)))
(define-public python-legacy-api-wrap
(package
(name "python-legacy-api-wrap")
(version "1.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "legacy-api-wrap" version))
(sha256
(base32
"06qhp0g543dy98vpa41hwdalvdbsjfc3ldk474yr9sd75mhl8jh3"))))
(build-system python-build-system)
(propagated-inputs
(list python-get-version python-pytest python-pytest-black
python-pytest-cov python-setuptools))
(home-page "https://github.com/flying-sheep/legacy-api-wrap")
(synopsis "Legacy API wrapper")
(description "This module defines a decorator to wrap legacy APIs. The
primary use case is APIs defined before keyword-only parameters existed.")
(license license:gpl3+)))
(define-public python-langdetect
(package
(name "python-langdetect")
(version "1.0.9")
(source
(origin
(method url-fetch)
(uri (pypi-uri "langdetect" version))
(sha256
(base32 "1805svvb7xjm4sf1j7b6nc3409x37pd1xmabfwwjf1ldkzwgxhfb"))))
(build-system python-build-system)
(propagated-inputs
(list python-six))
(home-page "https://github.com/Mimino666/langdetect")
(synopsis "Language detection library")
(description
"This library is a port of Nakatani Shuyo's language-detection library
(version from 03/03/2014) to Python.")
(license license:expat)))
(define-public python-pyasn1
(package
(name "python-pyasn1")
(version "0.4.8")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pyasn1" version))
(sha256
(base32
"1fnhbi3rmk47l9851gbik0flfr64vs5j0hbqx24cafjap6gprxxf"))))
(build-system python-build-system)
(home-page "https://pyasn1.sourceforge.net/")
(synopsis "ASN.1 types and codecs")
(description
"This is an implementation of ASN.1 types and codecs in Python. It is
suitable for a wide range of protocols based on the ASN.1 specification.")
(license license:bsd-2)))
(define-public python-pyasn1-modules
(package
(name "python-pyasn1-modules")
(version "0.2.8")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pyasn1-modules" version))
(sha256
(base32
"0pp6dcagd8c2c9qx3lahc1rdwlnmm0y0siqr5icjq2r32b3q8pwh"))))
(build-system python-build-system)
(propagated-inputs
(list python-pyasn1))
(home-page "https://sourceforge.net/projects/pyasn1/")
(synopsis "ASN.1 codec implementations")
(description
"Pyasn1-modules is a collection of Python modules providing ASN.1 types and
implementations of ASN.1-based codecs and protocols.")
(license license:bsd-3)))
(define-public python-ipaddress
(package
(name "python-ipaddress")
(version "1.0.23")
(source (origin
(method url-fetch)
(uri (pypi-uri "ipaddress" version))
(sha256
(base32
"1qp743h30s04m3cg3yk3fycad930jv17q7dsslj4mfw0jlvf1y5p"))))
(build-system python-build-system)
(home-page "https://github.com/phihag/ipaddress")
(synopsis "IP address manipulation library")
(description
"This package provides a fast, lightweight IPv4/IPv6 manipulation library
in Python. This library is used to create, poke at, and manipulate IPv4 and
IPv6 addresses and networks.")
(license license:psfl)))
(define-public python-asn1tools
(package
(name "python-asn1tools")
(version "0.166.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "asn1tools" version))
(sha256
(base32 "1hragm8dsm10rlyz67xslj01bycprlnimdmq1i2acns6kl6difpn"))))
(build-system python-build-system)
(propagated-inputs
(list python-bitstruct python-diskcache python-prompt-toolkit
python-pyparsing))
(home-page "https://github.com/eerimoq/asn1tools")
(synopsis "ASN.1 parsing, encoding and decoding")
(description "This package provides ASN.1 parsing, encoding and decoding
for Python, including constraints checking. It supports several
codecs (e.g. BER, PER, UPER, XER) as well as limited C source code generating
for OER and UPER.")
(license license:expat)))
(define-public python-idna
(package
(name "python-idna")
(version "3.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "idna" version))
(sha256
(base32
"0v8f6qjfi5i7qc5icsbv2pi24qy6k6m8wjqjvdf2sxjvlpq3yr4x"))))
(build-system python-build-system)
(home-page "https://github.com/kjd/idna")
(synopsis "Internationalized domain names in applications")
(description
"This is a library to support the Internationalised Domain Names in
Applications (IDNA) protocol as specified in RFC 5891. This version of the
protocol is often referred to as “IDNA2008” and can produce different results
from the earlier standard from 2003. The library is also intended to act as a
suitable drop-in replacement for the “encodings.idna” module that comes with
the Python standard library but currently only supports the older 2003
specification.")
(license license:bsd-4)))
(define-public python-libsass
(package
(name "python-libsass")
(version "0.22.0")
(source
(origin
;; PyPI tarball is missing some test files.
(method git-fetch)
(uri (git-reference
(url "https://github.com/sass/libsass-python")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "0j6c7jb1bnpmz76gs5za41qwgrs7v1yd1jkgvsy5ql6dg2ph9vp4"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
;; Use Guix package of libsass instead of compiling from a checkout.
(add-before 'build 'set-libsass
(lambda _ (setenv "SYSTEM_SASS" "indeed")))
;; XXX: Silent 2 failing tests, reported to upstream (closed), see
;; https://github.com/sass/libsass-python/issues/440. It passed with
;; libsass@3.6.5 which requires rebuild the world (1200+ packages),
;; remove when v3.6.5 is available.
(add-before 'check 'silent-failing-tests
(lambda _
(substitute* "sasstests.py"
(("def test_build_one")
"def __off_test_build_one")
(("def test_stack_trace_formatting")
"def __off_test_stack_trace_formatting"))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "sasstests.py"))))
(add-after 'install 'delete-test
(lambda* (#:key inputs outputs #:allow-other-keys)
;; Delete sasstests.py because it attempts to open a file
;; that is not installed when loaded, which breaks the sanity
;; check.
(delete-file (string-append
(assoc-ref outputs "out")
"/lib/python"
(python-version
(dirname (dirname
(search-input-file inputs "bin/python"))))
"/site-packages/sasstests.py")))))))
(native-inputs
(list python-pytest python-werkzeug))
(inputs
(list libsass))
(propagated-inputs
(list python-six))
(home-page "https://sass.github.io/libsass-python/")
(synopsis "Straightforward binding of libsass for Python")
(description
"This package provides a simple Python extension module @code{sass} which
is binding LibSass.")
(license license:expat)))
(define-public python-idna-ssl
(package
(name "python-idna-ssl")
(version "1.0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "idna-ssl" version))
(sha256
(base32
"0ydrc8hpg9mdr5hqq1lqfsfbn6sjq69slwpfrnlrm3k0phqg14qj"))))
(build-system python-build-system)
(arguments
`(#:tests? #f)) ;circular dependency with python-aiohttp
(propagated-inputs (list python-idna))
(home-page "https://github.com/aio-libs/idna-ssl")
(synopsis "Patch @code{ssl.match_hostname} for Unicode(idna) domains support")
(description "Patch @code{ssl.match_hostname} for Unicode(idna)
domains support.")
(license license:expat)))
;;; Variant used to break a cycle with python-pip-run-bootstrap.
(define-public python-path-bootstrap
(hidden-package
(package
(name "python-path-bootstrap")
(version "16.4.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "path" version))
(sha256
(base32 "0lig13gxnfv98v790db1smvsbd3mnj7y8rwyiwhfi6xiqibygwms"))))
(build-system pyproject-build-system)
(arguments
(list #:tests? #f))
(native-inputs (list python-setuptools-scm))
(home-page "https://github.com/jaraco/path")
(synopsis "Object-oriented file system path manipulation library")
(description "@code{path} (formerly @code{path.py}) implements path
objects as first-class entities, allowing common operations on files to be
invoked on those path objects directly.")
(license license:expat))))
(define-public python-path
(package/inherit python-path-bootstrap
(name "python-path")
(arguments
(substitute-keyword-arguments
(package-arguments python-path-bootstrap)
((#:tests? _ #f)
(not (%current-target-system)))
((#:test-flags flags #~'())
#~(append (list "-k"
(string-append
;; Do not test the myproject.toml build as it tries
;; to pull dependencies from the Internet.
"not project "
;; This tests assumes a root user exists.
"and not test_get_owner"))
#$flags))))
(native-inputs
(modify-inputs (package-native-inputs python-path-bootstrap)
(append python-appdirs
python-packaging
python-pygments
python-pytest
python-pytest-black
python-pytest-checkdocs
python-pytest-cov
python-pytest-enabler
python-pytest-flake8
python-pytest-mypy)))
(properties (alist-delete 'hidden?
(package-properties
python-path-bootstrap)))))
(define-public python-pathpy
(deprecated-package "python-pathpy" python-path))
(define-public python-pretend
(package
(name "python-pretend")
(version "1.0.9")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pretend" version))
(sha256
(base32
"040vm94lcbscg5p81g1icmwwwa2jm7wrd1ybmxnv1sz8rl8bh3n9"))))
(build-system python-build-system)
(home-page "https://github.com/alex/pretend")
(synopsis "Library for stubbing in Python")
(description
"Pretend is a library to make stubbing with Python easier. Stubbing is a
technique for writing tests. You may hear the term mixed up with mocks,
fakes, or doubles. Basically, a stub is an object that returns pre-canned
responses, rather than doing any computation.")
(license license:bsd-3)))
;;; Variant used to break a dependency cycle with
;;; python-pytest-perf-bootstrap.
(define-public python-pip-run-bootstrap
(hidden-package
(package
(name "python-pip-run-bootstrap")
(version "8.8.0")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/jaraco/pip-run")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0ycrjj3jgqcr9c2k7y8vprq65iblg0q0hvwz8zwi13gmb0ffds0c"))))
(build-system python-build-system)
(arguments
(list
#:tests? #f
#:phases
#~(modify-phases %standard-phases
(add-before 'build 'pretend-version
;; The version string is usually derived via setuptools-scm, but
;; without the git metadata available this fails.
(lambda _
(setenv "SETUPTOOLS_SCM_PRETEND_VERSION" #$version))))))
(native-inputs (list python-setuptools-scm))
(propagated-inputs (list python-autocommand python-path-bootstrap
python-packaging))
(home-page "https://github.com/jaraco/pip-run")
(synopsis "Dynamic dependency loader for Python")
(description "The @command{pip-run} command provides on-demand temporary
package installation for a single interpreter run. It replaces this series of
commands:
@example
$ virtualenv --python pythonX.X --system-site-packages /tmp/env
$ /tmp/env/bin/pip install pkg1 pkg2 -r reqs.txt
$ /tmp/env/bin/python ...
$ rm -rf /tmp/env
@end example")
(license license:expat))))
(define-public python-pip-run
(package/inherit python-pip-run-bootstrap
(name "python-pip-run")
(arguments
(substitute-keyword-arguments (package-arguments python-pip-run-bootstrap)
((#:tests? _ #f)
(not (%current-target-system)))
((#:phases phases #~%standard-phases)
#~(modify-phases #$phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-k"
(string-append
;; Do not test the myproject.toml build as it tries
;; to pull dependencies from the internet.
"not project "
;; These tests attempt to install dependencies from
;; the network and fail.
"and not test_pkg_imported "
"and not test_pkg_loaded_from_alternate_index ")))))))))
(propagated-inputs
(modify-inputs (package-propagated-inputs python-pip-run-bootstrap)
(replace "python-path-bootstrap" python-path)))
(native-inputs
(modify-inputs (package-native-inputs python-pip-run-bootstrap)
(append python-nbformat
python-pygments
python-pytest
python-pytest-black
python-pytest-checkdocs
python-pytest-cov
python-pytest-enabler
python-pytest-flake8
python-pytest-mypy)))
(properties (alist-delete 'hidden? (package-properties
python-pip-run-bootstrap)))))
(define-public python-tlsh
(package
(name "python-tlsh")
(version "4.11.2")
(home-page "https://github.com/trendmicro/tlsh")
(source
(origin
(method git-fetch)
(uri (git-reference (url home-page) (commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "1gb5j73nw3nmx030rf8pm75rns5syxhv44zxr6i74kjicyly1i9w"))))
(build-system python-build-system)
(arguments
(list #:phases
#~(modify-phases %standard-phases
(add-before 'build 'configure
(lambda _
(invoke "cmake" "."))) ;to generate tlsh_version.h
(add-after 'configure 'chdir
(lambda _
(chdir "py_ext")))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(with-directory-excursion "../Testing"
(invoke "./python_test.sh"))))))))
(native-inputs (list cmake-minimal))
(synopsis "Fuzzy matching library for Python")
(description
"Trend Micro Locality Sensitive Hash (TLSH) is a fuzzy matching library.
Given a byte stream with a minimum length of 256 bytes, TLSH generates a hash
value which can be used for similarity comparisons. Similar objects have
similar hash values, which allows for the detection of similar objects by
comparing their hash values. The byte stream should have a sufficient amount
of complexity; for example, a byte stream of identical bytes will not generate
a hash value.")
(license license:asl2.0)))
(define-public python-termcolor
(package
(name "python-termcolor")
(version "2.4.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "termcolor" version))
(sha256
(base32
"0ykvmjrsjr5w4h63x7qmx6rsdb1p5a4nv8wgg7nl3b688xhfbfda"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
'(modify-phases %standard-phases
(add-after 'unpack 'fix-pyproject
(lambda _
;; The build system doesn't like to hear of Python 3.13.
(substitute* "pyproject.toml"
((" \"Programming Language .*") "")))))))
(native-inputs
(list python-hatch-vcs
python-hatchling
python-pytest
python-pytest-cov))
(home-page "https://pypi.org/project/termcolor/")
(synopsis "ANSII Color formatting for terminal output")
(description
"This package provides ANSII Color formatting for output in terminals.")
(license license:expat)))
(define-public python-termcolor-1
(package
(inherit python-termcolor)
(version "1.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "termcolor" version))
(sha256
(base32
"0fv1vq14rpqwgazxg4981904lfyp84mnammw7y046491cv76jv8x"))))
;; There are no tests
(arguments (list #:tests? #false))))
(define-public python-terminaltables
(package
(name "python-terminaltables")
(version "3.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "terminaltables" version))
(sha256
(base32
"109vhldk6nv1z3hzp4dyqf6rjvlhl0y2k5k7qcm9fcrq5swhxszk"))))
(build-system python-build-system)
(home-page "https://github.com/Robpol86/terminaltables")
(synopsis
"Generate simple tables in terminals from a nested list of strings")
(description
"This package makes it easy to draw tables in terminal/console
applications from a list of lists of strings. It supports multi-line rows.")
(license license:expat)))
(define-public python-libarchive-c
(package
(name "python-libarchive-c")
(version "2.9")
(source (origin
(method url-fetch)
(uri (pypi-uri "libarchive-c" version))
(sha256
(base32
"0q7g6a97110bk0j5x81555kajyxh4sybaabab6v5sgr0xi6386cr"))))
(build-system python-build-system)
(arguments
'(#:phases (modify-phases %standard-phases
(add-before
'build 'reference-libarchive
(lambda* (#:key inputs #:allow-other-keys)
;; Retain the absolute file name of libarchive.so.
(let ((libarchive (assoc-ref inputs "libarchive")))
(substitute* "libarchive/ffi.py"
(("find_library\\('archive'\\)")
(string-append "'" libarchive
"/lib/libarchive.so'"))))))
(replace 'check
(lambda _ (invoke "pytest" "-vv"))))))
(native-inputs
(list python-mock python-pytest))
(inputs
(list libarchive))
(home-page "https://github.com/Changaco/python-libarchive-c")
(synopsis "Python interface to libarchive")
(description
"This package provides Python bindings to libarchive, a C library to
access possibly compressed archives in many different formats. It uses
Python's @code{ctypes} foreign function interface (FFI).")
(license license:lgpl2.0+)))
(define-public python-file
(package/inherit file
(name "python-file")
(build-system python-build-system)
(arguments
'(#:tests? #f ;no tests
#:configure-flags '("--single-version-externally-managed" "--root=/")
#:phases (modify-phases %standard-phases
(add-before 'build 'change-directory
(lambda _
(chdir "python")
#t))
(add-before 'build 'set-library-file-name
(lambda* (#:key inputs #:allow-other-keys)
(let ((file (assoc-ref inputs "file")))
(substitute* "magic.py"
(("find_library\\('magic'\\)")
(string-append "'" file "/lib/libmagic.so'")))
#t))))))
(inputs `(("file" ,file)))
(native-inputs (if (%current-target-system)
`(("self" ,this-package))
'()))
(synopsis "Python bindings to the libmagic file type guesser")
(description "This package provides Python bindings to the libmagic file
type guesser.
Note that this module and the @code{python-magic} module both provide a
@file{magic.py} file; these two modules, which are different and were
developed separately, both serve the same purpose: provide Python bindings for
libmagic.")))
(define-public python-pydevd
;; Use the latest commit, which includes cleanups that removes Python 2
;; syntax that would fail to build.
(let ((revision "0")
(commit "47e298499ef19563bb2ef5941a57046a35ae6868"))
(package
(name "python-pydevd")
(version (git-version "2.8.0" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/fabioz/PyDev.Debugger")
(commit commit)))
(modules '((guix build utils)))
(snippet '(begin
;; Delete pre-built binaries.
(for-each delete-file (find-files "." "\\.(so|dylib|dll)"))
;; This source is generated via Cython.
(delete-file "_pydevd_bundle/pydevd_cython.c")))
(file-name (git-file-name name version))
(sha256
(base32
"1yd017dh6xgxrqcyf8kk8jrr0a3zw895yfjih0z5jghyf0rck38q"))))
(build-system python-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'fix-tests
(lambda _
(substitute* "tests_python/test_convert_utilities.py"
;; Add missing trailing '/'.
(("'\\\\\\\\usr\\\\\\\\bin\\\\\\\\') == '/usr/bin" all)
(string-append all "/")))))
(add-after 'unpack 'patch-command-paths
(lambda* (#:key inputs #:allow-other-keys)
(substitute* "_pydevd_bundle/pydevd_api.py"
(("'kill'")
(format #f "~s" (search-input-file inputs "bin/kill")))
(("'pgrep'")
(format #f "~s" (search-input-file inputs "bin/pgrep"))))))
(add-after 'unpack 'generate-sources
(lambda _
(setenv "PYTHONPATH" (getcwd))
(invoke "python" "build_tools/build.py")))
(add-after 'unpack 'adjust-attach-binary-name
(lambda _
(substitute*
'("pydevd_tracing.py"
"pydevd_attach_to_process/add_code_to_python_process.py")
(("def get_(target|python_helper_lib)_filename.*" all)
(format #f "~a return ~s~%" all
(string-append #$output "/lib/attach.so"))))))
(add-after 'unpack 'patch-gdb
(lambda* (#:key inputs #:allow-other-keys)
(substitute*
"pydevd_attach_to_process/add_code_to_python_process.py"
(("'gdb',")
(format #f "~s," (search-input-file inputs "bin/gdb"))))))
(add-after 'build 'build-attach-linux-binary
(lambda _
(invoke #+(cxx-for-target) "-shared" "-o" "attach.so"
"-fPIC" "-nostartfiles"
"pydevd_attach_to_process/linux_and_mac/attach.cpp")))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(setenv "PYDEVD_USE_CYTHON" "YES")
(invoke "pytest" "-vv"
"-n" (number->string (parallel-job-count))
"-k"
(string-append
;; The two "break_01" tests have been failing on
;; Python 3.10:
;; <https://github.com/fabioz/PyDev.Debugger/issues/222>.
"not test_set_pydevd_break_01 "
;; This one fails for unknown reasons.
"and not test_completion_sockets_and_messages "
;; the GUI event loop requires an X server.
"and not test_gui_event_loop_custom "
;; This test validates that 'pydevd' is not in the
;; exception message, but it is due to being part
;; of the build file name present in the message.
"and not test_evaluate_exception_trace "
;; These fail on systems with YAMA LSM’s ptrace
;; scope > 0. Upstream issue:
;; https://github.com/fabioz/PyDev.Debugger/issues/218
"and not test_attach_to_pid")))))
(add-after 'install 'install-attach-binary
(lambda _
(install-file "attach.so"
(string-append #$output "/lib"))))
;; Some modules aren't designed to be loadable by themselves, such
;; as 'pydev_app_engine_debug_startup' and fail.
(delete 'sanity-check))))
(native-inputs
(list python-cython
python-numpy
python-psutil
python-pytest
python-pytest-xdist
python-trio
python-untangle))
(inputs (list coreutils gdb procps))
(home-page "https://github.com/fabioz/PyDev.Debugger/")
(synopsis "Python debugger")
(description "PyDev.Debugger is a capable Python debugger used in PyDev
and other @acronym{IDEs, Integrated Development Environments}.")
(license license:epl1.0))))
(define-public python-debugpy
(package
(name "python-debugpy")
(version "1.6.0")
(source
(origin
(method git-fetch)
(uri (git-reference ;no tests in PyPI archive
(url "https://github.com/microsoft/debugpy")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(modules '((guix build utils)))
;; Remove the bundled PyDev-Debugger copy, including its pre-built
;; attach binary.
(snippet '(delete-file-recursively "src/debugpy/_vendored"))
(patches (search-patches "python-debugpy-unbundle-pydevd.patch"))
(sha256
(base32
"1dpfzs3p51648i7f3fz8dw5d0vrj39iwn1jhn0226idc02ybyqih"))))
(build-system python-build-system)
(arguments
(list
#:tests? #f ; Fail on systems with YAMA LSM’s ptrace scope > 0.
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'patch-sh-in-tests
(lambda _
(substitute* "tests/debugpy/test_run.py"
(("#!/bin/sh")
(string-append "#!" (which "sh"))))))
(add-after 'unpack 'fix-version
;; Versioneer is useless when there is no git metadata.
(lambda _
(substitute* "setup.py"
(("version=versioneer.get_version\\(),")
(format #f "version=~s," #$version)))))
(add-before 'build 'configure
(lambda _
;; This adjusts the behavior of debugpy to load pydevd from
;; Python site packages.
(setenv "DEBUGPY_BUNDLING_DISABLED" "1")))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv"
"-n" (number->string (parallel-job-count))
"-k"
(string-append
;; These tests cannot be run in parallel because their
;; test data would not be copied by xdist and lead to
;; import errors. (see:
;; https://github.com/microsoft/debugpy/issues/342 and
;; https://github.com/microsoft/debugpy/issues/880).
"not test_custom_python_args "
"and not test_autokill "))))))))
(native-inputs
;; See: https://raw.githubusercontent.com/microsoft/debugpy/
;; main/tests/requirements.txt.
(list python-django
python-gevent
python-flask
python-psutil
python-pytest
python-pytest-cov
python-pytest-timeout
python-pytest-xdist
python-requests))
(propagated-inputs (list python-pydevd))
(home-page "https://aka.ms/debugpy")
(synopsis "Debug Adapter Protocol Python implementation")
(description "An implementation of the Debug Adapter Protocol for
Python.")
(license license:expat)))
(define-public python-debian
(package
(name "python-debian")
(home-page "https://salsa.debian.org/python-debian-team/python-debian")
(version "0.1.49")
(source
(origin
;; Use git-fetch, as pypi doesn't include test suite.
(method git-fetch)
(uri (git-reference
(url home-page)
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"190vy2ns0650icpwvv4qp6kr3c3i9jszy1vkdwpigxb96fs1bqf3"))
(modules '((guix build utils)))
(snippet
#~(begin
;; python-apt, apt and dpkg are not yet available in guix,
;; and these tests heavily depend on them.
(for-each delete-file
'("lib/debian/tests/test_deb822.py"
"lib/debian/tests/test_debfile.py"))
;; for reproducible builds, otherwise python-debian
;; generates a _version.py including the date
(copy-file "lib/debian/_version.py.in" "lib/debian/_version.py")
(substitute* "lib/debian/_version.py"
(("__CHANGELOG_VERSION__") #$version))))))
(build-system python-build-system)
(native-inputs
(list python-pytest))
(propagated-inputs
(list python-six python-chardet))
(synopsis "Debian package related modules")
(description
"This package provides Python modules that abstract many formats of
Debian-related files, such as:
@itemize
@item Debtags information;
@item @file{debian/changelog} files;
@item packages files, pdiffs;
@item control files of single or multiple RFC822-style paragraphs---e.g.
@file{debian/control}, @file{.changes}, @file{.dsc};
@item Raw @file{.deb} and @file{.ar} files, with (read-only) access to
contained files and meta-information.
@end itemize")
;; Modules are either GPLv2+ or GPLv3+.
(license license:gpl3+)))
(define-public python-json-spec
(package
(name "python-json-spec")
(version "0.11.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "json_spec" version))
(sha256
(base32
"0fwxirzxx5s9l0lwnjl6ki39xw1fsjm0vr6cm67ws27fkmcxcry7"))))
(build-system python-build-system)
(propagated-inputs
(list python-importlib-metadata
python-termcolor))
(native-inputs
(list python-pytest))
(home-page "https://json-spec.readthedocs.io/")
(synopsis
"JSON Schema, JSON Pointer and JSON Reference for Python")
(description
"This Python library implements several JSON specs, like JSON Schema,
JSON Reference and JSON Pointer.")
(license license:bsd-3)))
(define-public python-fastbencode
(package
(name "python-fastbencode")
(version "0.3.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "fastbencode" version))
(modules '((guix build utils)))
;; Delete pre-generated Cython C files.
(snippet '(for-each delete-file (find-files "." "\\.c$")))
(sha256
(base32 "15x1in22gwam7wwga5lbj1pd8hc9jk741pia3pv1m29n2xywpq2z"))))
(build-system python-build-system)
(native-inputs (list python-cython))
(home-page "https://github.com/breezy-team/fastbencode")
(synopsis "Python Bencode (de)serializer with optional fast C extensions")
(description
"The fastbencode Python package implements the bencode serialization
format for storing and transmitting loosely structured data, originally used
by BitTorrent.
The format can encode four different types of values: byte strings, integers,
lists, and dictionaries (associative arrays). It's simple and unaffected by
endianness,
This package includes both a pure-Python version and an optional C extension
based on Cython. Both provide the same functionality, but the C version has
significantly better performance.")
(license (list license:expat ; _bencode_py.py
license:gpl2+)))) ; __init__.py
(define-public python-fastjsonschema
(package
(name "python-fastjsonschema")
(version "2.15.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "fastjsonschema" version))
(sha256
(base32 "1ln2j60jzyn6p8i8ljygfgrji58hc23452g7nllkcjdk4p93c7v7"))))
(build-system pyproject-build-system)
(arguments `(#:tests? #f)) ;no tests included
(native-inputs
(list python-colorama
python-json-spec
python-jsonschema
python-pylint
python-pytest
python-pytest-benchmark
python-pytest-cache))
(home-page
"https://github.com/horejsek/python-fastjsonschema")
(synopsis
"Fast Python implementation of JSON schema")
(description
"This library implements validation of JSON documents by JSON schema for
drafts 04, 06 and 07.")
(license license:bsd-3)))
(define-public python-nbformat
(package
(name "python-nbformat")
(version "5.3.0")
;; The PyPi release tarball lacks some test cases and test data.
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/jupyter/nbformat")
(commit version)))
(sha256
(base32
"114c5c6cvpxhxj8zrw74351gcfzyzjh1jq3py4xf8wk9rahfay9z"))
(file-name (git-file-name name version))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key inputs outputs tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv")))))))
(propagated-inputs
(list python-fastjsonschema python-jsonschema python-jupyter-core
python-traitlets))
(native-inputs
(list python-pytest
python-testpath))
(home-page "https://jupyter.org")
(synopsis "Jupyter Notebook format")
(description "This package provides the reference implementation of the
Jupyter Notebook format and Python APIs for working with notebooks.")
(license license:bsd-3)))
(define-public python-nb-clean
(package
(name "python-nb-clean")
(version "2.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "nb-clean" version))
(sha256
(base32 "01qvk9n7rx15dhc23m8bj9bw5wdyxh6y18c5fm8hllmrd3ndsx14"))))
(build-system python-build-system)
(propagated-inputs (list python-nbformat))
(home-page "https://github.com/srstevenson/nb-clean")
(synopsis "Clean Jupyter notebooks for versioning")
(description "This package cleans Jupyter notebooks of cell execution
counts, metadata, outputs, and empty cells, preparing them for committing to
version control. It provides a Git filter to automatically clean notebooks
before they're staged, and can also be used with other version control
systems, as a command line tool, and as a Python library.")
(license license:isc)))
(define-public python-bleach
(package
(name "python-bleach")
(version "6.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "bleach" version))
(sha256
(base32 "054lp46iymchq3np0nar3k2h4da3wq4rzw652kdxh1syb70qa6hs"))
(snippet
#~(begin
(use-modules (guix build utils))
(substitute* (find-files "." "\\.py$")
(("bleach\\._vendor\\.html5lib") "html5lib"))
(delete-file-recursively "bleach/_vendor/html5lib")))))
(build-system pyproject-build-system)
(propagated-inputs (list python-html5lib python-tinycss2))
(native-inputs (list python-pytest))
(home-page "https://github.com/mozilla/bleach")
(synopsis "Whitelist-based HTML-sanitizing tool")
(description "Bleach is an easy whitelist-based HTML-sanitizing tool.")
(license license:asl2.0)))
(define-public python-entrypoints
(package
(name "python-entrypoints")
(version "0.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "entrypoints" version))
(sha256
(base32
"0lc4si3xb7hza424414rdqdc3vng3kcrph8jbvjqb32spqddf3f7"))))
(build-system python-build-system)
;; The package does not come with a setup.py file, so we have to generate
;; one ourselves.
(arguments
`(#:tests? #f
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'create-setup.py
(lambda _
(call-with-output-file "setup.py"
(lambda (port)
(format port "\
from setuptools import setup
setup(name='entrypoints', version='~a', py_modules=['entrypoints'])
" ,version))))))))
(home-page "https://github.com/takluyver/entrypoints")
(synopsis "Discover and load entry points from installed Python packages")
(description "Entry points are a way for Python packages to advertise
objects with some common interface. The most common examples are
@code{console_scripts} entry points, which define shell commands by
identifying a Python function to run. The @code{entrypoints} module contains
functions to find and load entry points.")
(license license:expat)))
(define-public python-epc
(package
(name "python-epc")
(version "0.0.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "epc" version))
(sha256
(base32
"09bx1ln1bwa00917dndlgs4k589h8qx2x080xch5m58p92kjwkd1"))))
(build-system python-build-system)
(propagated-inputs
(list python-sexpdata))
(native-inputs
(list python-nose))
(home-page "https://github.com/tkf/python-epc")
(synopsis "Remote procedure call (RPC) stack for Emacs Lisp and Python")
(description
"Python-EPC can call elisp functions from Python and Python functions
from elisp.")
(license license:gpl3)))
(define-public python-forex-python
(package
(name "python-forex-python")
(version "1.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "forex-python" version))
(sha256
(base32 "1ma8cl1i2dh8aa99pifnlilyy4d1gd1s07fj0yd17wcbpsh532cj"))))
(build-system python-build-system)
(arguments
;; Tests are not included in the PyPI tarball. Also, the tests in the
;; repository require online data.
`(#:tests? #f))
(propagated-inputs
(list python-requests python-simplejson))
(home-page "https://github.com/MicroPyramid/forex-python")
(synopsis "Foreign exchange rates and currency conversion")
(description
"@code{python-forex-python} can be used to manipulate foreign
exchange rates and to operate currency conversions.
Features:
@itemize
@item List all currency rates.
@item BitCoin price for all currencies.
@item Converting amount to BitCoins.
@item Get historical rates for any day since 1999.
@item Conversion rate for one currency(ex; USD to INR).
@item Convert amount from one currency to other.('USD 10$' to INR).
@item Currency symbols.
@item Currency names.
@end itemize")
(license license:expat)))
(define-public python-simpleeval
(package
(name "python-simpleeval")
(version "0.9.12")
(source
(origin
(method url-fetch)
(uri (pypi-uri "simpleeval" version))
(sha256
(base32 "0diysdzvx865yy2rjfah75ha2qfxaxz7r108kp7j2kkd903ya2ry"))))
(build-system python-build-system)
(home-page "https://github.com/danthedeckie/simpleeval")
(synopsis "Simple, safe single expression evaluator library")
(description
"This package provides a quick single file library for easily adding
evaluatable expressions into python projects. Say you want to allow a user
to set an alarm volume, which could depend on the time of day, alarm level,
how many previous alarms had gone off, and if there is music playing at the
time.")
(license license:expat)))
(define-public python-nbconvert
(package
(name "python-nbconvert")
(version "6.5.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "nbconvert" version))
(sha256
(base32
"17g9xq4za7vvzml6l6d8zrzknhxsvgx02hymmsw9d1dygbi4cgi2"))))
(build-system python-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'fix-paths
(lambda* (#:key inputs #:allow-other-keys)
;; Use pandoc binary from input.
(substitute* "nbconvert/utils/pandoc.py"
(("'pandoc'")
(format #f "~s" (search-input-file inputs "bin/pandoc"))))
;; Same for LaTeX.
(substitute* "nbconvert/exporters/pdf.py"
(("\"xelatex\"")
(format #f "~s" (search-input-file inputs "bin/xelatex")))
(("\"bibtex\"")
(format #f "~s" (search-input-file inputs "bin/bibtex"))))
;; Likewise for Inkscape.
(substitute* "nbconvert/preprocessors/svg2pdf.py"
(("inkscape_path = which\\(\"inkscape\")")
(format #f "inkscape_path = ~s"
(search-input-file inputs "bin/inkscape"))))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
;; Tests depend on templates installed to output.
(setenv "JUPYTER_PATH"
(string-append #$output "/share/jupyter:"
(getenv "JUPYTER_PATH")))
;; Step outside of the source directory to avoid having both
;; the installed package *and* the package from the source on
;; Python's path.
(with-directory-excursion "/tmp"
(invoke "pytest" "--pyargs" "nbconvert"
"-vv" "-n" (number->string (parallel-job-count))
"-k"
(string-append
;; These tests require pyppeteer, not yet
;; available in Guix.
"not test_webpdf_with_chromium "
"and not test_webpdf.py "
;; These tests require ipywidgets, which would
;; introduce a dependency cycle.
"and not test_execute_widgets_from_nbconvert "
"and not test_execute_multiple_notebooks ")))))))))
(inputs
(list inkscape/stable pandoc))
(native-inputs
(list python-ipykernel
;; Adding ipywidgets would create a cycle.
;;python-ipywidgets
;; XXX: Disabled, not in guix.
;;python-pyppeteer
python-pytest
python-pytest-xdist))
(propagated-inputs
(list python-beautifulsoup4
python-bleach
python-defusedxml
python-entrypoints
python-jinja2
python-jupyter-core
python-mistune
python-nbclient
python-nbformat
python-pandocfilters
python-pygments
python-jupyterlab-pygments
python-testpath
python-traitlets
;; Required, even if [serve] is not used.
python-tornado-6
;; Required at runtime for `jupyter nbconvert --to=pdf`.
texlive-adjustbox
texlive-booktabs
texlive-caption
texlive-collection-basic
texlive-enumitem
texlive-environ
texlive-eurosym
texlive-fancyvrb
texlive-float
texlive-fontspec
texlive-geometry
texlive-grffile
texlive-hyperref
texlive-jknapltx
texlive-jknapltx
texlive-lm
texlive-lm-math
texlive-mathpazo
texlive-ms
texlive-parskip
texlive-pdfcol
texlive-pgf
texlive-rsfs
texlive-stringenc
texlive-tcolorbox
texlive-titling
texlive-tools
texlive-trimspaces
texlive-ucs
texlive-ulem
texlive-unicode-math
texlive-upquote
texlive-xcolor
texlive-xetex
texlive-zapfding))
(home-page "https://jupyter.org")
(synopsis "Converting Jupyter Notebooks")
(description "The @code{nbconvert} tool, @code{jupyter nbconvert}, converts
notebooks to various other formats via Jinja templates. It allows you to
convert an @code{.ipynb} notebook file into various static formats including:
@enumerate
@item HTML
@item LaTeX
@item PDF
@item Reveal JS
@item Markdown (md)
@item ReStructured Text (rst)
@item executable script
@end enumerate\n")
(license license:bsd-3)))
(define-public python-notebook
(package
(name "python-notebook")
(version "6.4.10")
(source (origin
(method url-fetch)
(uri (pypi-uri "notebook" version))
(sha256
(base32
"03p976xq1l9xf4djwk0snmywd0zck3i6gjngxsl874i8qrmsf214"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'use-our-home-for-tests
(lambda _
;; The 'get_patch_env' function in this file reads:
;; 'HOME': cls.home_dir
;; but for some reason, that definition of HOME is not what the
;; GLib/GIO trash mechanism honors, which would cause test
;; failures. Instead, set 'HOME' here to an existing directory
;; and let the tests honor it.
(substitute* "notebook/tests/launchnotebook.py"
(("'HOME': .*," all)
(string-append "# " all "\n")))
(setenv "HOME" (getcwd))))
(replace 'check
(lambda* (#:key tests? inputs outputs #:allow-other-keys)
;; These tests require a browser.
(delete-file-recursively "notebook/tests/selenium")
(when tests?
;; Interferes with test expectations.
(unsetenv "JUPYTER_CONFIG_PATH")
;; Some tests do not expect all files to be installed in the
;; same directory, but JUPYTER_PATH contains multiple entries.
(unsetenv "JUPYTER_PATH")
(invoke "pytest" "-vv"
;; TODO: This tests fails because nbconvert does not
;; list "python" as a format.
"-k" "not test_list_formats")))))))
(propagated-inputs
(list python-argon2-cffi
python-ipykernel
python-ipython-genutils
python-jinja2
python-jupyter-client
python-jupyter-core
python-nest-asyncio
python-nbconvert
python-nbformat
python-prometheus-client
python-pyzmq
python-send2trash
python-terminado
python-tornado-6
python-traitlets))
(native-inputs
(list python-coverage
python-nbval
python-pytest
python-pytest-cov
python-requests
python-requests-unixsocket))
(home-page "https://jupyter.org/")
(synopsis "Web-based notebook environment for interactive computing")
(description
"The Jupyter HTML notebook is a web-based notebook environment for
interactive computing.")
(license license:bsd-3)))
(define-public python-widgetsnbextension
(package
(name "python-widgetsnbextension")
(version "3.5.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "widgetsnbextension" version))
(sha256
(base32
"1ismyaxbv9d56yqqqb8xl58hg0iq0bbyy014a53y1g3hfbc8g7q7"))))
(build-system python-build-system)
(propagated-inputs
(list python-notebook))
(home-page "https://ipython.org")
(synopsis "IPython HTML widgets for Jupyter")
(description "This package provides interactive HTML widgets for Jupyter
notebooks.")
(license license:bsd-3)))
(define-public python-ipywidgets
(package
(name "python-ipywidgets")
(version "7.6.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ipywidgets" version))
(sha256
(base32
"1w217j8i53x14l7b05fk300k222zs9vkcjaa1rbrw3sk43k466lz"))))
(build-system python-build-system)
(propagated-inputs
(list python-ipykernel
python-ipython
python-jupyterlab-widgets
python-nbformat
python-traitlets
python-widgetsnbextension))
(native-inputs
(list python-mock python-pytest python-pytest-cov))
(home-page "https://ipython.org")
(synopsis "IPython HTML widgets for Jupyter")
(description "Ipywidgets are interactive HTML widgets for Jupyter
notebooks and the IPython kernel. Notebooks come alive when interactive
widgets are used. Users gain control of their data and can visualize changes
in the data.")
(license license:bsd-3)))
(define-public python-jupyter-console
(package
(name "python-jupyter-console")
(version "6.4.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "jupyter_console" version))
(sha256
(base32
"1iqrxhd8hvlyf8cqbc731ssnwm61wrycnbiczy5wsfahd3hlh8i4"))))
(build-system python-build-system)
(propagated-inputs
(list python-ipykernel python-jupyter-client python-prompt-toolkit
python-pygments))
(native-inputs
(list python-nose python-pytest))
(home-page "https://jupyter.org")
(synopsis "Jupyter terminal console")
(description "This package provides a terminal-based console frontend for
Jupyter kernels. It also allows for console-based interaction with non-Python
Jupyter kernels such as IJulia and IRKernel.")
(license license:bsd-3)))
;; The python-ipython and python-jupyter-console require each other. To get
;; the functionality in both packages working, strip down the
;; python-jupyter-console package when using it as an input to python-ipython.
(define python-jupyter-console-minimal
(package/inherit python-jupyter-console
(name "python-jupyter-console-minimal")
(arguments
(substitute-keyword-arguments
(package-arguments python-jupyter-console)
((#:phases phases)
`(modify-phases ,phases
(add-after 'install 'delete-bin
(lambda* (#:key outputs #:allow-other-keys)
;; Delete the bin files, to avoid conflicts in profiles
;; where python-ipython and python-jupyter-console are
;; both present.
(delete-file-recursively
(string-append
(assoc-ref outputs "out") "/bin"))))))))
;; Remove the python-ipython propagated input, to avoid the cycle
(propagated-inputs
(modify-inputs (package-propagated-inputs python-jupyter-console)
(delete "python-ipython")))))
(define-public python-qtconsole
(package
(name "python-qtconsole")
(version "5.3.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "qtconsole" version))
(sha256
(base32 "09anp8g7vqi8z8wyi2lv21a2frd2dyhyrzvcrk2anijyqzyj0dcf"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'check 'pre-check
(lambda _
(setenv "QT_QPA_PLATFORM" "offscreen")
(setenv "HOME" "/tmp")
;; FIXME: skip a failing test.
(substitute* "qtconsole/tests/test_jupyter_widget.py"
(("def test_other_output") "def _test_other_output")))))))
(propagated-inputs
(list python-ipykernel python-ipython-genutils python-jupyter-client
python-jupyter-core python-pygments python-pyqt
python-pyzmq python-qtpy python-traitlets))
(native-inputs
(list python-flaky python-pytest python-pytest-qt))
(home-page "https://jupyter.org")
(synopsis "Jupyter Qt console")
(description "This package provides a Qt-based console for Jupyter with
support for rich media output.")
(license license:bsd-3)))
(define-public python-jsbeautifier
(package
(name "python-jsbeautifier")
(version "1.10.2")
(home-page "https://github.com/beautify-web/js-beautify")
(source (origin
(method git-fetch)
(uri (git-reference
(url home-page)
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0wawb070ki1axb3jc9xvsrgpji52vcfif3zmjzc3z4g98m5xw4kg"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(add-after 'unpack 'chdir
(lambda _
;; The upstream Git repository contains all the code,
;; but this package only builds the python code.
(chdir "python")
#t))
(add-after 'unpack 'patch-python-six-requirements
(lambda _
(substitute* "python/setup.py"
(("six>=1.12.0")
"six>=1.11.0"))
#t)))))
(propagated-inputs
(list python-editorconfig python-six))
(native-inputs
(list python-pytest))
(synopsis "JavaScript unobfuscator and beautifier")
(description "Beautify, unpack or deobfuscate JavaScript, leveraging
popular online obfuscators.")
(license license:expat)))
(define-public jupyter
(package
(name "jupyter")
(version "1.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "jupyter" version))
(sha256
(base32
"0pwf3pminkzyzgx5kcplvvbvwrrzd3baa7lmh96f647k30rlpp6r"))))
(build-system python-build-system)
(arguments '(#:tests? #f)) ; there are none.
(propagated-inputs
(list python-ipykernel
python-ipywidgets
python-jupyter-console
python-nbconvert
python-notebook
python-qtconsole))
(home-page "https://jupyter.org")
(synopsis "Web application for interactive documents")
(description
"The Jupyter Notebook is a web application that allows you to create and
share documents that contain live code, equations, visualizations and
explanatory text. Uses include: data cleaning and transformation, numerical
simulation, statistical modeling, machine learning and much more.")
(license license:bsd-3)))
(define-public python-chardet
(package
(name "python-chardet")
(version "5.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "chardet" version))
(sha256
(base32
"1r9ixxnish9j3dq4h0z0cwlkr4f5lgi6d8mhbzw59hbbjlmp2qhd"))))
(native-inputs
(list python-pytest))
(build-system pyproject-build-system)
(arguments
(list #:test-flags
;; Disable test that fails sporadically:
;; https://github.com/chardet/chardet/issues/256
#~'("-k" "not test_detect_all_and_detect_one_should_agree")
#:phases
#~(modify-phases %standard-phases
;; This package provides a 'chardetect' executable that only
;; depends on Python, so customize the wrap phase to avoid
;; adding pytest and friends in order to save size.
;; (See also <https://bugs.gnu.org/25235>.)
(replace 'wrap
(lambda* (#:key inputs outputs #:allow-other-keys)
(let* ((sitedir (site-packages inputs outputs))
(python (dirname (dirname
(search-input-file
inputs "bin/python"))))
(python-sitedir
(string-append python "/lib/python"
(python-version python)
"/site-packages")))
(wrap-program (string-append #$output "/bin/chardetect")
`("GUIX_PYTHONPATH" ":" suffix
,(list sitedir python-sitedir)))))))))
(home-page "https://github.com/chardet/chardet")
(synopsis "Universal encoding detector for Python 2 and 3")
(description
"This package provides @code{chardet}, a Python module that can
automatically detect a wide range of file encodings.")
(license license:lgpl2.1+)))
(define-public python-charset-normalizer
(package
(name "python-charset-normalizer")
(version "2.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "charset-normalizer" version))
(sha256
(base32 "04zlajr77f6c7ai59l46as1idi0jjgbvj72lh4v5wfpz2s070pjp"))))
(build-system python-build-system)
(arguments
(list #:phases
#~(modify-phases %standard-phases
;; This package provides a 'normalizer' executable that only
;; depends on Python, so customize the wrap phase to avoid
;; adding pytest and friends in order to save size.
;; (See also <https://bugs.gnu.org/25235>.)
(replace 'wrap
(lambda* (#:key inputs outputs #:allow-other-keys)
(let* ((sitedir (site-packages inputs outputs))
(python (dirname (dirname
(search-input-file
inputs "bin/python"))))
(python-sitedir
(string-append python "/lib/python"
(python-version python)
"/site-packages")))
(wrap-program (string-append #$output "/bin/normalizer")
`("GUIX_PYTHONPATH" ":" suffix
,(list sitedir python-sitedir)))))))))
(native-inputs
(list python-pytest))
(home-page "https://github.com/ousret/charset_normalizer")
(synopsis "Universal Charset Detector, alternative to Chardet")
(description "This library helps you read text from an unknown charset
encoding. Motivated by @code{chardet}, it tries to resolve the issue by
taking a new approach. All IANA character set names for which the Python core
library provides codecs are supported.")
(license license:expat)))
(define-public python-docopt
(package
(name "python-docopt")
(version "0.6.2")
(source
(origin
(method git-fetch)
;; The release on PyPI does not include tests.
(uri (git-reference
(url "https://github.com/docopt/docopt")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"0aad9gbswnnhssin2q0m5lmpm0ahyf80ahs2zjigbn5y7fvljnd0"))
(patches (search-patches "python-docopt-pytest6-compat.patch"))))
(build-system python-build-system)
(native-inputs
(list python-pytest))
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "py.test")))))))
(home-page "http://docopt.org")
(synopsis "Command-line interface description language for Python")
(description "This library allows the user to define a command-line
interface from a program's help message rather than specifying it
programmatically with command-line parsers like @code{getopt} and
@code{argparse}.")
(license license:expat)))
(define-public python-pythonanywhere
(package
(name "python-pythonanywhere")
(version "0.12.1")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/pythonanywhere/helper_scripts")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"12898jrq8bi90s5v3wirj7zprk08smwzwdx09y07x770frqd80vl"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'check 'change-home
(lambda _
(setenv "HOME" "/tmp")))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
;; Exclude tests marked as slowtest that assume running
;; inside Git repository on system with virtualenvwrapper
;; installed.
(invoke "pytest" "-m" "not slowtest")))))))
(native-inputs
(list python-pytest
python-psutil
python-responses
python-pytest-mock))
(propagated-inputs
(list python-dateutil
python-docopt
python-packaging
python-requests
python-schema
python-tabulate
python-typer))
(home-page "https://github.com/pythonanywhere/helper_scripts/")
(synopsis "PythonAnywhere helper tools for users")
(description "PythonAnywhere provides a command-line interface and an
application programming interface that allows managing files Web apps, scheduled
tasks and students. It includes single-command deployment for the Django Girls
tutorial.")
(license license:expat)))
(define-public python-pythondialog
(package
(name "python-pythondialog")
(version "3.4.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "pythondialog" version))
(sha256
(base32
"1728ghsran47jczn9bhlnkvk5bvqmmbihabgif5h705b84r1272c"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(add-after 'unpack 'patch-path
(lambda* (#:key inputs #:allow-other-keys)
(let* ((dialog (assoc-ref inputs "dialog")))
(substitute* "dialog.py"
(("os.getenv\\(\"PATH\", \":/bin:/usr/bin\"\\)") (string-append
"os.getenv(\"PATH\") + \":"
dialog
"/bin\"")))
#t))))
#:tests? #f))
(propagated-inputs (list dialog))
(home-page "https://pythondialog.sourceforge.net/")
(synopsis "Python interface to the UNIX dialog utility")
(description
"A Python wrapper for the dialog utility. Its purpose is to
provide an easy to use, pythonic and comprehensive Python interface to dialog.
This allows one to make simple text-mode user interfaces on Unix-like systems")
(license license:lgpl2.1)))
(define-public python-confection
(package
(name "python-confection")
(version "0.0.4")
(source (origin
(method url-fetch)
(uri (pypi-uri "confection" version))
(sha256
(base32
"1ksfn10zhnpkcj3y0c3xs4dznvc062bk62x4c3ig0dd6bn4gbpdi"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-pydantic python-srsly
python-typing-extensions))
(native-inputs (list python-pytest))
(home-page "https://github.com/explosion/confection")
(synopsis "Config system for Python")
(description "Confection is a lightweight library that offers a
configuration system letting you conveniently describe arbitrary trees of
objects.")
(license license:expat)))
(define-public python-configobj
(package
(name "python-configobj")
(version "5.0.6")
(source (origin
(method url-fetch)
(uri (pypi-uri "configobj" version))
(sha256
(base32
"00h9rcmws03xvdlfni11yb60bz3kxfvsj6dg6nrpzj71f03nbxd2"))
;; Patch setup.py so it looks for python-setuptools, which is
;; required to parse the keyword 'install_requires' in setup.py.
(patches (search-patches "python-configobj-setuptools.patch"))))
(build-system python-build-system)
(propagated-inputs
(list python-six))
(synopsis "Config file reading, writing and validation")
(description "ConfigObj is a simple but powerful config file reader and
writer: an ini file round tripper. Its main feature is that it is very easy to
use, with a straightforward programmer’s interface and a simple syntax for
config files.")
(home-page "https://github.com/DiffSK/configobj")
(license license:bsd-3)))
(define-public python-omegaconf
(package
(name "python-omegaconf")
(version "2.2.3")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/omry/omegaconf")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(modules '((guix build utils)))
(snippet #~(begin
(delete-file-recursively "build_helpers/bin")
(substitute* "build_helpers/build_helpers.py"
(("java") "antlr4")
(("\"-jar\",") "")
(("str\\(build_dir / \"bin\" / \"antlr.*\"\\),") ""))))
(sha256
(base32
"00rw1rkjycn0jdg3jmar6jdxb1pcb21jclm5g1921s9z8f5ii5dh"))))
(build-system pyproject-build-system)
(arguments
(list #:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'loosen-requirements
(lambda _
(substitute* "requirements/base.txt"
(("antlr4-python3-runtime==.*")
"antlr4-python3-runtime >=4.9\n"))
;; Ignore deprecation warnings.
(substitute* "pyproject.toml"
(("-Werror") "")))))))
(propagated-inputs (list java-antlr4-runtime-python
python-pydevd
python-pyyaml))
(native-inputs (list icedtea antlr4 python-pytest python-pytest-mock))
(home-page "https://github.com/omry/omegaconf")
(synopsis "Flexible configuration system")
(description "OmegaConf is a hierarchical configuration system and
supports merging configurations from multiple sources. It provides a
consistent API regardless of how the configuration was created.")
(license license:bsd-3)))
(define-public python-configargparse
(package
(name "python-configargparse")
(version "1.7")
(source (origin
(method url-fetch)
(uri (pypi-uri "ConfigArgParse" version))
(sha256
(base32
"1l866g1dcf2ljf8fl7ggpxk1rggry0lya4d5b264gradi1qp81p7"))))
(build-system pyproject-build-system)
(native-inputs
(list python-mock python-pytest))
(propagated-inputs
(list python-pyyaml))
(synopsis "Replacement for argparse")
(description "A drop-in replacement for argparse that allows options to also
be set via config files and/or environment variables.")
(home-page "https://github.com/bw2/ConfigArgParse")
(license license:expat)))
(define-public python-connection-pool
(package
(name "python-connection-pool")
(version "0.0.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "connection_pool" version))
(sha256
(base32 "1p6hfkcl4n3hhhcgjbaxn21i7b1yipag6j7dnilir4k5xxx9whmz"))))
(build-system python-build-system)
(home-page "https://github.com/zhouyl/ConnectionPool")
(synopsis "Thread-safe connection pool")
(description "This package provides a library implementing a thread-safe
connection pool.")
(license license:expat)))
(define-public python-argparse-manpage
(package
(name "python-argparse-manpage")
(version "4.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "argparse-manpage" version))
(sha256
(base32
"1nq4sq1zk1xzdsqq61hd27jhj978ys136aba1zjg02x1g0c0cg11"))))
(build-system pyproject-build-system)
(native-inputs
(list python-pytest python-tomli))
(home-page "https://github.com/praiskup/argparse-manpage")
(synopsis "Build manual page from Python's ArgumentParser object")
(description
"This package provides tools to build manual pages from Python's
@code{ArgumentParser} object.")
(license license:asl2.0)))
(define-public python-contextlib2
(package
(name "python-contextlib2")
(version "0.6.0.post1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "contextlib2" version))
(sha256
(base32
"0bhnr2ac7wy5l85ji909gyljyk85n92w8pdvslmrvc8qih4r1x01"))))
(build-system python-build-system)
(home-page "https://contextlib2.readthedocs.org/")
(synopsis "Tools for decorators and context managers")
(description "This module is primarily a backport of the Python
3.2 contextlib to earlier Python versions. Like contextlib, it
provides utilities for common tasks involving decorators and context
managers. It also contains additional features that are not part of
the standard library.")
(license license:psfl)))
(define-public python-contexttimer
(package
(name "python-contexttimer")
(version "0.3.3")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/brouberol/contexttimer")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "00a9h06a1wj66935n863qlk4jpl9gvdvzkkhl8xmgqwdkwv0js54"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-decorator python-unittest2))
(native-inputs (list python-mock))
(home-page "https://github.com/brouberol/contexttimer")
(synopsis "Timer as a context manager")
(description
"This package offers utilities to measure code block or function
execution time.")
(license license:gpl3)))
(define-public python-texttable
(package
(name "python-texttable")
(version "1.6.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "texttable" version))
(sha256
(base32
"1sbn821394rix6xgj3zqk743pj6nqm1qz81zgis2bcpp2ng7pvj2"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests? (invoke "pytest" "-vv" "tests.py")))))))
(native-inputs
(list python-pytest))
(home-page "https://github.com/foutaise/texttable/")
(synopsis "Python module for creating simple ASCII tables")
(description "Texttable is a Python module for creating simple ASCII
tables.")
(license license:expat)))
(define-public python-atomicwrites
(package
(name "python-atomicwrites")
(version "1.4.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "atomicwrites" version))
(sha256
(base32
"0yla2svfhfqrcj8qbyqzx7wi4jy0dwcxvlkg0k3zjd54s5m3jw5f"))))
(build-system python-build-system)
(arguments `(#:tests? #f)) ;avoid circular dependency with pytest
(synopsis "Atomic file writes in Python")
(description "Library for atomic file writes using platform dependent tools
for atomic file system operations.")
(home-page "https://github.com/untitaker/python-atomicwrites")
(license license:expat)))
(define-public python-qstylizer
(package
(name "python-qstylizer")
(version "0.2.3")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/blambright/qstylizer")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "1n11f63pbqzmb7sj9cj0jq9kv8sfinjqhg7fs0mnfsrici8435br"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-before 'build 'set-pbr-version
(lambda _
(setenv "PBR_VERSION" "3.0.1"))))))
(native-inputs
(list python-pbr
python-pytest
python-pytest-catchlog
python-pytest-mock))
(propagated-inputs
(list python-inflection python-tinycss2))
(home-page "https://github.com/blambright/qstylizer")
(synopsis "Qt stylesheet generation utility for PyQt/PySide")
(description "@code{qstylizer} is a Python package designed to help with
the construction of PyQt/PySide stylesheets.")
(license license:expat)))
(define-public python-click-threading
(package
(name "python-click-threading")
(version "0.5.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "click-threading" version))
(sha256
(base32
"0f9lmxwcq0y9lb8w0whbni7gwy12gbv74h1igh85qn9aq0iydkxd"))))
(build-system python-build-system)
(propagated-inputs
(list python-click))
(synopsis "Utilities for multithreading in Click")
(description "This package provides utilities for multithreading in Click
applications.")
(home-page "https://github.com/click-contrib/click-threading")
(license license:expat)))
(define-public python-click-log
(package
(name "python-click-log")
(version "0.3.2")
(source (origin
(method url-fetch)
(uri (pypi-uri "click-log" version))
(sha256
(base32
"091i03bhxyzsdbc6kilxhivfda2f8ymz3b33xa6cj5kbzjiirz8n"))))
(build-system python-build-system)
(propagated-inputs
(list python-click))
(synopsis "Logging for click applications")
(description "This package provides a Python library for logging Click
applications.")
(home-page "https://github.com/click-contrib/click-log")
(license license:expat)))
(define-public python-click-default-group
(package
(name "python-click-default-group")
(version "1.2.4")
(source
(origin
(method git-fetch) ; no tests in PyPI release
(uri (git-reference
(url "https://github.com/click-contrib/click-default-group")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "06h12qwg0lhvxlgfm9768afibwp8j6r3r440v630a30bv0nkhngm"))))
(build-system pyproject-build-system)
(propagated-inputs
(list python-click))
(native-inputs
(list python-flit-core python-pytest))
(synopsis "Extends click.Group")
(description "This package extends click.Group to invoke a command without
explicit subcommand name.")
(home-page "https://github.com/click-contrib/click-default-group")
(license license:bsd-3)))
(define-public python-structlog
(package
(name "python-structlog")
(version "23.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "structlog" version))
(sha256
(base32
"0swh5wxghpzdkncsl3zhiq5bblkj4i5r3g00lldw2qyiswfnh397"))))
(build-system pyproject-build-system)
(native-inputs
(list ;; For the build
python-hatch-fancy-pypi-readme
python-hatch-vcs
python-hatchling
;; For the tests
python-coverage
python-freezegun
python-pretend
python-pytest
python-pytest-asyncio
python-simplejson
python-twisted))
(home-page "https://www.structlog.org/")
(synopsis "Structured Logging for Python")
(description "@code{structlog} changes logging in Python by adding structure
to your log entries.")
(license (list license:asl2.0 license:expat))))
(define-public python-apipkg
(package
(name "python-apipkg")
(version "1.5")
(source (origin
(method url-fetch)
(uri (pypi-uri "apipkg" version))
(sha256
(base32
"1xhak74yj3lqflvpijg15rnkklrigvsp5q7s4as4h6a157d8q8ip"))))
(build-system python-build-system)
(native-inputs
(list python-pytest python-setuptools-scm))
(synopsis "Namespace control and lazy-import mechanism")
(description "With apipkg you can control the exported namespace of a Python
package and greatly reduce the number of imports for your users. It is a small
pure Python module that works on virtually all Python versions.")
(home-page "https://github.com/pytest-dev/apipkg")
(license license:expat)))
(define-public python-execnet
;; The latest release (1.9.0) is old and lacks support for Pytest 7.2.
(let ((commit "d6aa1a56773c2e887515d63e50b1d08338cb78a7")
(revision "1"))
(package
(name "python-execnet")
(version (git-version "1.9.0" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/pytest-dev/execnet")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"0s60jggcjiw38b7xsh1q2lnnr4c4kaki7c5zsv7xyj7df8ngbbsm"))))
(build-system pyproject-build-system)
(arguments
(list
;; ;; This test hasn't been updated for the latest Pytest yet:
;; #:test-flags #~(list "--ignore" "testing/test_rsync.py")
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'adjust-for-pytest-7.2+
(lambda _
;; This test fails with an error because @py.test has been
;; deprecated for @pytest in recent Pytest.
(substitute* "testing/test_rsync.py"
(("@py.test")
"@pytest"))))
(add-before 'build 'pretend-version
;; The version string is usually derived via setuptools-scm, but
;; without the git metadata available this fails.
(lambda _
;; hatch-vcs uses setuptools under the hood.
(setenv "SETUPTOOLS_SCM_PRETEND_VERSION"
;; Massage the version string to a PEP-0440 compatible
;; one.
#$(car (string-split version #\-)))))
(add-before 'check 'prepare-for-tests
(lambda _
;; Unset PYTHONDONTWRITEBYTECODE to match the
;; expectations of a test in
;; 'testing/test_gateway.py'.
(unsetenv "PYTHONDONTWRITEBYTECODE"))))))
(native-inputs
(list python-hatchling
python-hatch-vcs
python-py
python-pytest
python-pytest-timeout
python-setuptools-scm))
(synopsis "Rapid multi-Python deployment")
(description "Execnet provides a share-nothing model with
channel-send/receive communication for distributing execution across many
Python interpreters across version, platform and network barriers. It has a
minimal and fast API targeting the following uses:
@enumerate
@item distribute tasks to (many) local or remote CPUs
@item write and deploy hybrid multi-process applications
@item write scripts to administer multiple environments
@end enumerate")
(home-page "https://codespeak.net/execnet/")
(license license:expat))))
(define-public python-icalendar
(package
(name "python-icalendar")
(version "4.1.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "icalendar" version))
(sha256
(base32
"15dkq42rkqjdi17rpvmd1plnbwn4daby0nk1s1c3xi7w5v0bfj4p"))))
(build-system python-build-system)
(propagated-inputs
(list python-dateutil python-pytz))
(synopsis "Python library for parsing iCalendar files")
(description "The icalendar package is a parser/generator of iCalendar
files for use with Python.")
(home-page "https://github.com/collective/icalendar")
(license license:bsd-2)))
(define-public python-args
(let ((commit "9460f1a35eb3055e9e4de1f0a6932e0883c72d65") (revision "0"))
(package
(name "python-args")
(version (git-version "0.1.0" revision commit))
(home-page "https://github.com/kennethreitz-archive/args")
(source (origin
(method git-fetch)
(uri (git-reference
(url home-page)
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"1zfxpbp9vldqdrjmd0c6y3wisl35mx5v8zlyp3nhwpy1730wrc9j"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(add-after 'unpack 'patch-args.py
(lambda _
(substitute* "args.py"
(("basestring") "str"))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "nosetests" "-v")))))))
(native-inputs (list python-nose))
(synopsis "Command-line argument parser")
(description
"This library provides a Python module to parse command-line arguments.")
(license license:bsd-3))))
(define-public python-clint
(package
(name "python-clint")
(version "0.5.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "clint" version))
(sha256
(base32
"1an5lkkqk1zha47198p42ji3m94xmzx1a03dn7866m87n4r4q8h5"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _ (invoke "py.test" "-v"))))))
(native-inputs
(list python-pytest))
(propagated-inputs
(list python-args))
(home-page "https://github.com/kennethreitz/clint")
(synopsis "Command-line interface tools")
(description
"Clint is a Python module filled with a set of tools for developing
command-line applications, including tools for colored and indented
output, progress bar display, and pipes.")
(license license:isc)))
(define-public python-rply
(package
(name "python-rply")
(version "0.7.8")
(source (origin
(method url-fetch)
(uri (pypi-uri "rply" version))
(sha256
(base32
"1j81nddvnb145x4p81bnfpyai6g26i2dc1633ycsk025bb18m01a"))))
(build-system python-build-system)
(propagated-inputs
(list python-appdirs))
(home-page "https://github.com/alex/rply")
(synopsis "Parser generator for Python")
(description
"This package provides a pure Python based parser generator, that also
works with RPython. It is a more-or-less direct port of David Bazzley's PLY,
with a new public API, and RPython support.")
(license license:bsd-3)))
(define-public python-hy
(package
(name "python-hy")
(version "0.29.0")
(source
(origin
(method git-fetch) ;no tests in PyPI release
(uri (git-reference
(url "https://github.com/hylang/hy")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "0fp5x94hyckjfap2pb1rj551a3q70vrljxark7hj9kdhr7prbggi"))))
(build-system pyproject-build-system)
(arguments
(list
;; This test expects the hy executable to be called 'hy', but in Guix
;; it's .hy-real.
#:test-flags #~(list "-k" "not test_sys_executable")))
(native-inputs (list python-pytest-next python-wheel))
(propagated-inputs (list python-funcparserlib))
(home-page "https://docs.hylang.org/en/stable/")
(synopsis "Lisp frontend to Python")
(description
"Hy is a dialect of Lisp that's embedded in Python. Since Hy transforms
its Lisp code into the Python Abstract Syntax Tree, you have the whole world of
Python at your fingertips, in Lisp form.")
(license license:expat)))
(define-public python-hissp
(package
(name "python-hissp")
(version "0.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "hissp" version))
(sha256
(base32
"0yns7f0q699zn2ziagyas2nkndl7mp1hhssv9x9mpl7jxj2p5myw"))))
(build-system python-build-system)
(home-page "https://github.com/gilch/hissp")
(synopsis "It's Python with a Lissp")
(description "Hissp is a modular Lisp implementation that compiles to a
functional subset of Python—Syntactic macro metaprogramming with full access
to the Python ecosystem.")
(license license:asl2.0)))
(define-public python-promise
(package
(name "python-promise")
(version "0.4.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "promise" version))
(sha256
(base32
"1k19ms8l3d5jzjh557rgkxb5sg4mqgfc315rn4hx1z3n8qq6lr3h"))))
(build-system python-build-system)
;; Tests wants python-futures, which is a python2 only program, and
;; can't be found by python-promise at test time.
(arguments `(#:tests? #f))
(home-page "https://github.com/syrusakbary/promise")
(synopsis "Promises/A+ implementation for Python")
(description
"Promises/A+ implementation for Python")
(license license:expat)))
(define-public python-progress
(package
(name "python-progress")
(version "1.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "progress" version))
(sha256
(base32 "1k9lpb7lqr6mywpnqcz71y6qny54xlgprdp327za2gy0nnc6xj69"))))
(build-system python-build-system)
(home-page "http://github.com/verigak/progress/")
(synopsis "Progress reporting bars for Python")
(description "This Python package provides progress reporting for visual
of progress of long running operations. There are multiple choices of
progress bars and spinners, with customizable options, such as width, fill
character, and suffix.")
(license license:isc)))
(define-public python-progressbar2
(package
(name "python-progressbar2")
(version "3.51.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "progressbar2" version))
(sha256
(base32
"0b2v3mim90rmfvixkaniz2qrs650sk230rzgd5zhcjfldmlqgxpc"))))
(build-system python-build-system)
(propagated-inputs
(list python-six python-utils))
(native-inputs
(list python-flake8
python-freezegun
python-pycodestyle
python-pytest
python-pytest-cache
python-pytest-cov
python-pytest-flakes
python-pytest-pep8
python-sphinx))
(home-page "https://github.com/WoLpH/python-progressbar")
(synopsis "Text progress bar library for Python")
(description
"This package provides a Python progressbar library to provide
visual (yet text based) progress to long running operations.")
(license license:bsd-3)))
(define-public python-progressbar33
(package
(name "python-progressbar33")
(version "2.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "progressbar33" version))
(sha256
(base32
"1zvf6zs5hzrc03p9nfs4p16vhilqikycvv1yk0pxn8s07fdhvzji"))))
(build-system python-build-system)
(home-page "https://github.com/germangh/python-progressbar")
(synopsis "Text progress bar library for Python")
(description
"This package provides a text progress bar library for Python. This
version only differs from the original @code{progressbar} package in that it
uses relative package imports instead of absolute imports, which is necessary
for the module to work under Python 3.3.")
;; Either or both of these licenses may be selected.
(license (list license:lgpl2.1+ license:bsd-3))))
(define-public python-colorama
(package
(name "python-colorama")
(version "0.4.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "colorama" version))
(sha256
(base32 "16w62sm95hmh55rqxn4zwdz0bkh3fqm1qnz9cwi3s510iasb4har"))))
(build-system python-build-system)
(synopsis "Colored terminal text rendering for Python")
(description "Colorama is a Python library for rendering colored terminal
text.")
(home-page "https://pypi.org/project/colorama/")
(license license:bsd-3)))
;; awscli and botocore do not accept version 0.4.4
(define-public python-colorama-for-awscli
(package
(inherit python-colorama)
(version "0.4.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "colorama" version))
(sha256
(base32 "189n8hpijy14jfan4ha9f5n06mnl33cxz7ay92wjqgkr639s0vg9"))))))
(define-public python-moto
(package
(name "python-moto")
(version "3.1.4")
(source (origin
(method url-fetch)
(uri (pypi-uri "moto" version))
(sha256
(base32 "0dfnad1f9d5ybabs69dzc7x357z1r4jbhrhgw57gyic1qnmcw864"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch-hardcoded-executable-names
(lambda* (#:key inputs #:allow-other-keys)
(let ((bash-exec (search-input-file inputs "/bin/sh")))
(substitute* "moto/batch/models.py"
(("/bin/sh") bash-exec))
(substitute* (find-files "tests" "\\.py$")
(("#!/bin/bash") (string-append "#!" bash-exec))))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv" "-m" "not network" "-k"
(string-append
;; XXX: This test is timing sensitive and may
;; fail non-deterministically.
"not test_cancel_pending_job"
;; These tests require Docker.
" and not test_terminate_job"
" and not test_invoke_function_from_sqs_exception"
" and not test_create_custom_lambda_resource__verify_cfnresponse_failed"
" and not test_lambda_function"
;; These tests also require the network.
" and not test_put_record_batch_http_destination"
" and not test_put_record_http_destination"
" and not test_dependencies"
" and not test_cancel_running_job"
" and not test_container_overrides"))))))))
(native-inputs
(list python-flask
python-flask-cors
python-freezegun
python-graphql-core
python-pytest
python-sure))
(inputs
(list bash-minimal))
(propagated-inputs
(list python-aws-xray-sdk
python-boto3
python-botocore
python-cfn-lint
python-cryptography
python-dateutil
python-docker
python-importlib-metadata
python-jinja2
python-jose
python-jsondiff
python-markupsafe
python-pytz
python-pyyaml
python-requests
python-responses
python-sshpubkeys
python-werkzeug
python-xmltodict))
(home-page "https://github.com/spulec/moto")
(synopsis "Mock out the boto library")
(description
"@code{moto} is a library designed to easily mock out the
@code{boto} library.")
(license license:asl2.0)))
(define-public python-rsa
(package
(name "python-rsa")
(version "3.4.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "rsa" version))
(sha256
(base32
"1dcxvszbikgzh99ybdc7jq0zb9wspy2ds8z9mjsqiyv3q884xpr5"))))
(build-system python-build-system)
(propagated-inputs
(list python-pyasn1))
(synopsis "Pure-Python RSA implementation")
(description "Python-RSA is a pure-Python RSA implementation. It supports
encryption and decryption, signing and verifying signatures, and key
generation according to PKCS#1 version 1.5. It can be used as a Python
library as well as on the command line.")
(home-page "https://stuvel.eu/rsa")
(license license:asl2.0)))
(define-public python-plumbum
(package
(name "python-plumbum")
(version "1.7.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "plumbum" version))
(sha256
(base32 "1kidj821k79dw064rlxh84xamb9h79ychg3pgj81jlvm5hs48xri"))))
(build-system python-build-system)
(arguments
`(#:tests? #f)) ;no tests
(native-inputs
;; XXX: Not actually used since there are no tests but required for
;; build.
(list python-pytest))
(home-page "https://plumbum.readthedocs.io")
(synopsis "Python shell combinators library")
(description
"Plumbum is a library of tools for replacing shell scripts with Python
code.")
(license license:expat)))
(define-public python-deprecation
(package
(name "python-deprecation")
(version "2.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "deprecation" version))
(sha256
(base32
"1zqqjlgmhgkpzg9ss5ki8wamxl83xn51fs6gn2a8cxsx9vkbvcvj"))))
(build-system python-build-system)
(propagated-inputs
(list python-packaging))
(native-inputs
(list python-unittest2))
(home-page "https://deprecation.readthedocs.io/")
(synopsis "Python library to handle automated deprecations")
(description
"This is a library that enables automated deprecations. It offers the
@code{deprecated()} decorator to wrap functions, providing proper warnings
both in documentation and via Python’s warnings system, as well as the
@code{deprecation.fail_if_not_removed()} decorator for test methods to ensure
that deprecated code is eventually removed.")
(license license:asl2.0)))
(define-public python-jmespath
(package
(name "python-jmespath")
(version "1.0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "jmespath" version))
(sha256
(base32
"1gpdc1f0q5c9scmbw1l9g40jjfk3pxwg91ayvn7xbvvddlh1n9lh"))))
(build-system python-build-system)
(native-inputs
(list python-pytest))
(synopsis "JSON Matching Expressions")
(description "JMESPath (pronounced “james path”) is a Python library that
allows one to declaratively specify how to extract elements from a JSON
document.")
(home-page "https://github.com/jmespath/jmespath.py")
(license license:expat)))
(define-public python-symengine
(package
(name "python-symengine")
(version "0.11.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "symengine" version))
(sha256
(base32 "0n54rdpmz3bmxrbjqflmlrgc27rvik1jkv6x3cjvgsq4p0lhvlqd"))))
(build-system python-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(if tests?
;; Run tests against installed package.
(with-directory-excursion "/tmp"
(invoke "nosetests" "-v" "symengine.tests"))
(format #t "test suite not run~%")))))))
(native-inputs
(list cmake python-cython-3 python-nose))
(inputs
(list symengine))
(home-page "https://github.com/symengine/symengine.py")
(synopsis "Python library providing wrappers to SymEngine")
(description
"This library provides a Python wrapper to SymEngine, a fast C++ symbolic
manipulation library.")
(license license:expat)))
(define-public python-uncertainties
(package
(name "python-uncertainties")
(version "3.1.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "uncertainties" version))
(sha256
(base32
"00z9xl40czmqk0vmxjvmjvwb41r893l4dad7nj1nh6blw3kw28li"))))
(build-system python-build-system)
;; While there are test files, there is no "tests" directory, so the tests
;; fail.
(arguments '(#:tests? #false))
(propagated-inputs
(list python-future))
(native-inputs
(list python-nose python-numpy))
(home-page "https://uncertainties-python-package.readthedocs.io/")
(synopsis "Calculations with uncertainties")
(description
"The uncertainties package transparently handles calculations with
numbers with uncertainties. It can also yield the derivatives of any
expression.")
(license license:bsd-3)))
(define-public python-unicodedata2
(package
(name "python-unicodedata2")
(version "15.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "unicodedata2" version))
(sha256
(base32 "0bcgls7m2zndpd8whgznnd5908jbsa50si2bh88wsn0agcznhv7d"))))
(build-system python-build-system)
(home-page "https://github.com/fonttools/unicodedata2")
(synopsis "Python unicodedata backport")
(description "This package corresponds to the latest @code{unicodedata}
standard Python module.")
(license license:asl2.0)))
(define-public python-asteval
(package
(name "python-asteval")
(version "0.9.23")
(source
(origin
(method url-fetch)
(uri (pypi-uri "asteval" version))
(sha256
(base32
"0f54sd4w1a72ij1bcxs2x7dk9xf8bzclawijf1z18bqx9f96l2gm"))))
(build-system python-build-system)
(native-inputs
(list python-pytest))
(home-page "https://github.com/newville/asteval")
(synopsis "Minimalistic evaluator of Python expressions")
(description
"This package provides a minimalistic evaluator of Python expression
using the @code{ast} module")
(license license:expat)))
(define-public python-lmfit
(package
(name "python-lmfit")
(version "1.0.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "lmfit" version))
(sha256
(base32
"0iab33jjb60f8kn0k0cqb0vjp1mdskks2n3kpn97zkw5cvjhq2b7"))))
(build-system python-build-system)
(propagated-inputs
(list python-asteval python-numpy python-scipy python-uncertainties))
(native-inputs
(list python-pytest))
(home-page "https://lmfit.github.io/lmfit-py/")
(synopsis "Least-Squares minimization with bounds and constraints")
(description
"Lmfit provides a high-level interface to non-linear optimization and
curve fitting problems for Python. It builds on and extends many of the
optimization methods of @code{scipy.optimize}. Initially inspired by (and
named for) extending the Levenberg-Marquardt method from
@code{scipy.optimize.leastsq}, lmfit now provides a number of useful
enhancements to optimization and data fitting problems.")
(license license:bsd-3)))
(define-public python-bokeh
(package
(name "python-bokeh")
(version "2.4.3")
(source (origin
(method url-fetch)
(uri (pypi-uri "bokeh" version))
(sha256
(base32
"00sbhya9vfdv3yi07j6mxwx1x1h9497nhd3smdjrcdxgc48q0czg"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
;; These require selenium.
(delete-file "tests/unit/bokeh/io/test_export.py")
(delete-file "tests/unit/bokeh/io/test_webdriver.py")
(delete-file "tests/unit/bokeh/embed/test_standalone.py")
;; Doesn't find ManagedServerLoop fixture
(delete-file "tests/unit/bokeh/test_client_server.py")
;; This fails because of the Guix wrapper around pytest
(delete-file "tests/unit/bokeh/io/test_util__io.py")
;; Fixture ipython not found.
(delete-file "tests/unit/bokeh/application/handlers/test_notebook__handlers.py")
(delete-file "tests/unit/bokeh/command/subcommands/test_info.py")
;; pd fixture not found.
(delete-file "tests/unit/bokeh/models/test_mappers.py")
(delete-file "tests/unit/bokeh/models/util/test_structure.py")
(delete-file "tests/unit/bokeh/plotting/test__plot.py")
(delete-file "tests/unit/bokeh/plotting/test__graph.py")
(delete-file "tests/unit/bokeh/plotting/test_figure.py")
(delete-file "tests/unit/bokeh/core/test_json_encoder.py")
(delete-file "tests/unit/bokeh/core/property/test_bases.py")
(delete-file "tests/unit/bokeh/core/property/test_container.py")
(delete-file "tests/unit/bokeh/core/property/test_dataspec.py")
(delete-file "tests/unit/bokeh/core/property/test_datetime.py")
(delete-file "tests/unit/bokeh/core/property/test_pandas.py")
;; nx fixture not found.
(delete-file "tests/unit/bokeh/plotting/test_graph.py")
(delete-file "tests/unit/bokeh/models/test_graphs.py")
(delete-file "tests/unit/bokeh/io/test_showing.py")
(delete-file "tests/unit/bokeh/document/test_events__document.py")
;; These tests need external sample data
(delete-file-recursively "tests/unit/bokeh/sampledata/")
;; Attempts to install something via npm.
(delete-file "tests/unit/bokeh/test_ext.py")
;; More failures due to set up problems.
(delete-file "tests/unit/bokeh/server/test_server__server.py")
(delete-file "tests/unit/bokeh/server/test_tornado__server.py")
(delete-file "tests/unit/bokeh/util/test_serialization.py")
(delete-file "tests/unit/bokeh/util/test_hex.py")
(delete-file "tests/unit/bokeh/models/test_sources.py")
(delete-file "tests/unit/bokeh/embed/test_bundle.py")
;; XXX: This one test transforms a gif of a red box. It
;; transforms it all right but the base64 doesn't look as
;; expected, probably because of a change in pillow.
(invoke "pytest" "-v" "-k" "not test_transform_PIL")))))))
(propagated-inputs
(list node-lts
python-jinja2
python-numpy
python-packaging
python-pillow
python-pyyaml
python-tornado-6
python-typing-extensions))
(native-inputs
(list python-beautifulsoup4
python-dateutil
python-flaky
python-mock
python-nbconvert
python-pandas
python-pytest
python-pytz
python-requests))
(home-page "https://github.com/bokeh/bokeh")
(synopsis "Interactive plots and applications in the browser from Python")
(description
"This package provides tools for interactive plots and applications in the
browser from Python.")
(license license:bsd-3)))
(define-public python-boto
(package
(name "python-boto")
(version "2.49.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "boto" version))
(sha256
(base32
"0njy09c4wjx7ipxhwi6vv404nflyiasl78vwwxxpclnql903n3ga"))))
(build-system python-build-system)
(arguments
;; XXX: This package is unmaintained and has problems with newer versions
;; of Python 3 as well as test libraries. 'python-moto' still uses a
;; subset of this library, so keep it around for now, but disable tests.
'(#:tests? #f))
(propagated-inputs
(list python-paramiko python-requests))
(home-page "https://github.com/boto/boto")
(synopsis "Python interfaces for Amazon Web Services")
(description
"This package provides various facilities for interacting with Amazon
Web Services through Python.
This software is unmaintained, and new projects should use @code{boto3} instead.")
(license license:expat)))
(define-public python-botocore
;; Note: When updating botocore, also make sure that boto3 and awscli
;; are compatible.
(package
(name "python-botocore")
(version "1.24.35")
(source
(origin
(method url-fetch)
(uri (pypi-uri "botocore" version))
(sha256
(base32
"0rv8mvhq5s373zdjs2yb45hzvqcqdh2lp2rbb21jjc8ciwnl5d9n"))))
(build-system python-build-system)
(arguments
;; FIXME: Many tests are failing.
'(#:tests? #f))
(propagated-inputs
(list python-dateutil python-jmespath python-urllib3))
(home-page "https://github.com/boto/botocore")
(synopsis "Low-level interface to AWS")
(description "Botocore is a Python library that provides a low-level
interface to the Amazon Web Services (AWS) API.")
(license license:asl2.0)))
(define-public python-boto3
(package
(name "python-boto3")
(version "1.21.35")
(home-page "https://github.com/boto/boto3")
(source (origin
(method git-fetch)
(uri (git-reference (url home-page) (commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"1kdyf238rpfldnpzs0rdh3nhjn6hwfym4faskyhzlgzkf1smmbg1"))))
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'delete-network-tests
;; Deleting integration tests because they are trying to connect to AWS.
(lambda _
(delete-file-recursively "tests/integration")))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-v")))))))
(build-system python-build-system)
(native-inputs
(list python-nose python-mock python-pytest))
(propagated-inputs
(list python-botocore python-jmespath python-s3transfer))
(synopsis "AWS SDK for Python")
(description
"Boto3 is a Python library for writing programs that interact with
@acronym{AWS,Amazon Web Services}.")
(license license:asl2.0)))
(define-public python-pyfiglet
(package
(name "python-pyfiglet")
(version "0.8.post1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pyfiglet" version))
(sha256
(base32
"0f9n2076ga2ccsg174k2d7n0z4d44ml96yzc72s6g4nhalbk5hn6"))))
(build-system python-build-system)
(home-page "https://github.com/pwaller/pyfiglet")
(synopsis "Draw ASCII art big letters in Python")
(description "This module lets you draw large letter from ordinary characters
in pure Python.")
(license license:expat)))
(define-public python-xdg
(package
(name "python-xdg")
(version "6.0.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "xdg" version))
(sha256
(base32
"14hwk9j5zjc8rvirw95mrb07zdnpjaxjx2mj3rnq8pnlyaa809r4"))))
(build-system pyproject-build-system)
(native-inputs
(list python-poetry-core))
(home-page "https://github.com/srstevenson/xdg-base-dirs")
(synopsis "Variables defined by the XDG Base Directory Specification")
(description "xdg-base-dirs is a Python module that provides functions to
return paths to the directories defined by the XDG Base Directory
Specification, to save you from duplicating the same snippet of logic in every
Python utility you write that deals with user cache, configuration, or data
files.")
(license license:isc)))
(define-public python-xdo
(package
(name "python-xdo")
(version "0.3")
(source (origin
(method url-fetch)
(uri (string-append
"http://http.debian.net/debian/pool/main/p/python-xdo/"
"python-xdo_" version ".orig.tar.gz"))
(sha256
(base32
"1vqh1n5yy5dhnq312kwrl90fnck4v26is3lq3lxdvcn60vv19da0"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(add-before 'install 'patch-libxdo-path
;; Hardcode the path of dynamically loaded libxdo library.
(lambda* (#:key inputs #:allow-other-keys)
(let ((libxdo (string-append
(assoc-ref inputs "xdotool")
"/lib/libxdo.so"))
(libc (string-append
(assoc-ref inputs "libc")
"/lib/libc.so.6")))
(substitute* "xdo/_xdo.py"
(("find_library\\(\"xdo\"\\)")
(simple-format #f "\"~a\"" libxdo))
(("ctypes\\.util\\.find_library\\('libc'\\)")
(simple-format #f "\"~a\"" libc)))
#t))))
#:tests? #f)) ; no tests provided
(propagated-inputs
(list python-six))
(inputs
`(("xdotool" ,xdotool)
("libX11" ,libx11)))
(home-page "https://tracker.debian.org/pkg/python-xdo")
(synopsis "Python library for simulating X11 keyboard/mouse input")
(description "Provides bindings to libxdo for manipulating X11 via simulated
input. (Note that this is mostly a legacy library; you may wish to look at
python-xdo for newer bindings.)")
(license license:bsd-3)))
(define-public python-xdoctest
(package
(name "python-xdoctest")
(version "1.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "xdoctest" version))
(sha256
(base32 "0bgbmb9nqv95f9gfxqifqff1qaz5fnanjqy4hv7ygrjp2kksgfvy"))))
(build-system python-build-system)
(arguments
(list #:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
;; A writable HOME is needed by the
;; 'import_module_from_path' test.
(setenv "HOME" "/tmp")
(invoke "pytest" "-vv")))))))
(propagated-inputs (list python-six))
(native-inputs (list python-pytest which))
(home-page "https://github.com/Erotemic/xdoctest")
(synopsis "Rewrite of the Python builtin doctest module")
(description "This package provides a rewrite of the builtin doctest
module which leverages the Python @acronym{AST, Abstract Syntax Tree} instead
of @acronym{REGEXPs, regular expressions}.")
(license license:asl2.0)))
(define-public python-mako
(package
(name "python-mako")
(version "1.2.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Mako" version))
(sha256
(base32
"0gqnv9py1dqp01jmf5zxp0vj2dbhq1l9zy55fai319iv6sdqc91p"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(if tests?
(invoke "pytest" "-vv")
(format #t "test suite not run~%"))
#t)))))
(propagated-inputs
(list python-markupsafe))
(native-inputs
(list python-mock python-pytest))
(home-page "https://www.makotemplates.org/")
(synopsis "Templating language for Python")
(description "Mako is a templating language for Python that compiles
templates into Python modules.")
(license license:expat)))
(define-public python-waitress
(package
(name "python-waitress")
(version "3.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "waitress" version))
(sha256
(base32
"18dq4bibsv6cfhv6a3b16w2xwycxqkkiwbb0vpcwsd21n1ws8p80"))))
(build-system pyproject-build-system)
(arguments
;; https://github.com/Pylons/waitress/issues/443
(list #:test-flags #~(list "-k" "not test_service_port")))
(native-inputs (list python-pytest python-pytest-cov))
(home-page "https://github.com/Pylons/waitress")
(synopsis "Waitress WSGI server")
(description "Waitress is meant to be a production-quality pure-Python WSGI
server with very acceptable performance.")
(license license:zpl2.1)))
(define-public python-whichcraft
(package
(name "python-whichcraft")
(version "0.6.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "whichcraft" version))
(sha256
(base32
"11yfkzyplizdgndy34vyd5qlmr1n5mxis3a3svxmx8fnccdvknxc"))))
(build-system python-build-system)
(native-inputs
(list python-pytest))
(home-page "https://github.com/pydanny/whichcraft")
(synopsis "Cross-platform cross-python shutil.which functionality")
(description
"This package provides a shim of the shutil.which function that's
designed to work across multiple versions of Python.")
(license license:bsd-3)))
(define-public python-cookiecutter
(package
(name "python-cookiecutter")
(version "2.6.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "cookiecutter" version))
(sha256
(base32 "0762882zrvf3sslr9r7v8wkdwjckhm2clj4d831gvx54kqbgh8fv"))))
(build-system python-build-system)
(arguments
(list
#:phases #~(modify-phases %standard-phases
(add-before 'check 'pre-check
(lambda _
;; test_get_user_config.py requires a writable home
;; directory.
(setenv "HOME"
(getcwd))
;; test_hooks.py dynamically creates shell scripts
;; with a /bin/bash shebang. We have to patch these.
(substitute* "tests/test_hooks.py"
(("/bin/bash")
(string-append #$(this-package-native-input
"bash-minimal") "/bin/bash")))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest")))))))
(native-inputs (list bash-minimal
git
python-freezegun
python-pytest
python-pytest-cov
python-pytest-mock))
(propagated-inputs (list python-arrow
python-binaryornot
python-click
python-jinja2
python-pyyaml
python-requests
python-rich
python-slugify))
(home-page "https://github.com/cookiecutter/cookiecutter")
(synopsis
"Command-line utility that creates projects from project templates")
(description
"This package provides a command-line utility that creates projects from
project templates, e.g. creating a Python package project from a Python package
project template.")
(license license:bsd-3)))
(define-public python-pyquery
(package
(name "python-pyquery")
(version "1.2.17")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pyquery" version))
(sha256
(base32
"1xia20wm0vx5dk85kcwgh13bylz8qh47ffjxssd2586r60xi783a"))))
(build-system python-build-system)
(native-inputs
(list python-webob python-webtest))
(propagated-inputs
(list python-lxml python-cssselect))
(home-page "https://github.com/gawel/pyquery")
(synopsis "Make jQuery-like queries on xml documents")
(description "pyquery allows you to make jQuery queries on xml documents.
The API is as much as possible the similar to jQuery. pyquery uses lxml for
fast xml and html manipulation.")
(license license:bsd-3)))
(define-public python-anyjson
(package
(name "python-anyjson")
(version "0.3.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "anyjson" version))
(sha256
(base32
"1fjph4alvcscsl5d4b6qpv1yh31jy05jxi1l0xff7lws7j32v09p"))))
(build-system python-build-system)
(arguments
`(;; We could possibly get tests working, but on Python 3 it's not so easy.
;; Very strangely, 2to3 is run *during setup.py install* (or bdist, or
;; whatever) so this transformation needs to be done before the tests
;; can be run. Maybe we could add a build step to transform beforehand
;; but it could be annoying/difficult.
#:tests? #f))
(native-inputs (list python-setuptools-57)) ;for use_2to3 support
(home-page "https://bitbucket.org/runeh/anyjson/")
(synopsis
"Wraps best available JSON implementation in a common interface")
(description
"Anyjson loads whichever is the fastest JSON module installed
and provides a uniform API regardless of which JSON implementation is used.")
(license license:bsd-3)))
(define-public python-amqp
(package
(name "python-amqp")
(version "5.1.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "amqp" version))
(sha256
(base32 "1qmmffiy48nady7is8529vxcyqbq88v5zgawqr3fk4q8rkz166rc"))))
(build-system python-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv"
"-c" "/dev/null" ;take control over pytest options
;; Integration tests require network connectivity.
"--ignore" "t/integration")))))))
(native-inputs (list python-pytest))
(propagated-inputs (list python-vine))
(home-page "https://github.com/celery/py-amqp")
(synopsis "Low-level AMQP client for Python (fork of amqplib)")
(description
"This is a fork of amqplib which was originally written by Barry Pederson.
It is maintained by the Celery project, and used by kombu as a pure python
alternative when librabbitmq is not available.")
(license license:lgpl2.1+)))
(define-public python-benchmark-4dn
(package
(name "python-benchmark-4dn")
(version "0.5.23")
(source (origin
(method url-fetch)
(uri (pypi-uri "Benchmark-4dn" version))
(sha256
(base32
"0z3vxrkap59sk394ynvp0457mdvb201idcswlrpgjscnrp2h4ypi"))))
(properties '(("upstream-name" . "Benchmark-4dn")))
(build-system pyproject-build-system)
(native-inputs
(list python-poetry-core))
(home-page "https://github.com/SooLee/Benchmark/")
(synopsis "Benchmark functions for CWL workflows")
(description
"This package provides benchmark functions that return total space, memory,
CPUs required per given input size, and parameters for CWL workflows.")
(license license:expat)))
(define-public python-beniget
(package
(name "python-beniget")
(version "0.4.1")
(home-page "https://github.com/serge-sans-paille/beniget")
(source
(origin
(method url-fetch)
(uri (pypi-uri "beniget" version))
(sha256
(base32 "035c4f78yllpw2c5p1w92520rilm7nnpsqh7yvi3qmfhi8xlnmbm"))))
(build-system python-build-system)
(propagated-inputs
(list python-gast))
(synopsis "Extract semantic information about static Python code")
(description
"Beniget is a collection of analyzers for Python @acronym{AST,
Abstract Syntax Tree}. It is a building block for writing a static analyzer
or compiler for Python.")
(license license:bsd-3)))
(define-public python-txamqp
(package
(name "python-txamqp")
(version "0.8.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "txAMQP" version))
(sha256
(base32
"0jd9864k3csc06kipiwzjlk9mq4054s8kzk5q1cfnxj8572s4iv4"))))
(build-system python-build-system)
(propagated-inputs
(list python-six python-twisted))
(home-page "https://github.com/txamqp/txamqp")
(synopsis "Communicate with AMQP peers and brokers using Twisted")
(description
"This package provides a Python library for communicating with AMQP peers
and brokers using the asynchronous networking framework Twisted. It contains
all the necessary code to connect, send and receive messages to/from an
AMQP-compliant peer or broker (Qpid, OpenAMQ, RabbitMQ) using Twisted. It
also includes support for using Thrift RPC over AMQP in Twisted
applications.")
(license license:asl2.0)))
(define-public python-kombu
(package
(name "python-kombu")
(version "5.3.7")
(source
(origin
(method url-fetch)
(uri (pypi-uri "kombu" version))
(sha256
(base32 "1gwp3b7w7jhsas40655pa9nlblm12irjapfkx0flmhamlgclq701"))))
(build-system pyproject-build-system)
(arguments
(list #:test-flags
;; TODO: Package azure-identity (required for this file)
#~(list "--ignore" "t/unit/transport/test_azurestoragequeues.py")))
(native-inputs
(list python-botocore
python-case
python-pyro4
python-pytest
python-pytest-sugar
python-tzdata))
(propagated-inputs
(list python-amqp python-typing-extensions python-vine))
(home-page "https://kombu.readthedocs.io")
(synopsis "Message passing library for Python")
(description "The aim of Kombu is to make messaging in Python as easy as
possible by providing an idiomatic high-level interface for the AMQ protocol,
and also provide proven and tested solutions to common messaging problems.
AMQP is the Advanced Message Queuing Protocol, an open standard protocol for
message orientation, queuing, routing, reliability and security, for which the
RabbitMQ messaging server is the most popular implementation.")
(license license:bsd-3)))
(define-public python-billiard
(package
(name "python-billiard")
(version "4.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "billiard" version))
(sha256
(base32 "0b2svqx81511m0k2swjkybcx69f541dzd4rgfdxa2ni7rf232g4s"))))
(build-system pyproject-build-system)
(arguments
(list #:phases #~(modify-phases %standard-phases
(add-after 'unpack 'remove-win-files
(lambda _
(for-each delete-file-recursively
'("billiard/popen_spawn_win32.py"
"billiard/_win.py")))))))
(native-inputs
(list python-case python-psutil python-pytest))
(home-page "https://github.com/celery/billiard")
(synopsis "Python multiprocessing fork with improvements and bugfixes")
(description
"Billiard is a fork of the Python 2.7 multiprocessing package. The
multiprocessing package itself is a renamed and updated version of R Oudkerk's
pyprocessing package. This standalone variant is intended to be compatible with
Python 2.4 and 2.5, and will draw its fixes/improvements from python-trunk.")
(license license:bsd-3)))
(define-public python-celery
(package
(name "python-celery")
(version "5.4.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "celery" version))
(sha256
(base32 "01p7lyydhqk7fna5zn49qxj3yk0xah63725dmkajjc4d1qa1jjjh"))))
(build-system pyproject-build-system)
(arguments
(list
;; The MongoDB backend test appears to expect an older
;; version of MongoDB which provided its own bson
;; module, fails with " AttributeError: module 'bson'
;; has no attribute 'encode'".
#:test-flags #~(list "--ignore" "t/unit/backends/test_mongodb.py"
;; AssertionError.
"-k" "not test_check_privileges_no_fchown")
#:phases #~(modify-phases %standard-phases
;; Celery requires tzdata >= 2022.7, we have 2022.1.
(add-after 'unpack 'relax-requirements
(lambda _
(substitute* "requirements/default.txt"
(("tzdata.*")
"tzdata\n")))))))
(native-inputs
(list python-case
python-dnspython
python-flaky
python-google-cloud-storage
python-iniconfig
python-moto
python-msgpack
python-pytest ;for pytest-subtests
python-pytest-celery
python-pytest-click
python-pytest-subtests
python-pytest-timeout
python-toml))
(propagated-inputs
(list python-billiard
python-click
python-click-didyoumean
python-click-plugins
python-click-repl
python-kombu
python-tzdata
python-vine))
(home-page "https://celeryproject.org")
(synopsis "Distributed Task Queue")
(description "Celery is an asynchronous task queue/job queue based on
distributed message passing. It is focused on real-time operation, but
supports scheduling as well. The execution units, called tasks, are executed
concurrently on a single or more worker servers using multiprocessing,
Eventlet, or gevent. Tasks can execute asynchronously (in the background) or
synchronously (wait until ready).")
(license license:bsd-3)))
(define-public python-cesium
(package
(name "python-cesium")
(version "0.12.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "cesium" version))
(sha256
(base32
"0jr0ycqz9ns6mcskm4sxx92k40fj3v0x9knjaw5ac9f3mpqxsfbv"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
;; The installed test files contain the /gnu/store location, not the
;; location of the discovered test files from the build directory.
;; The test framework doesn't like this. The easiest way around
;; this mismatch is to jump to the output directory.
(add-before 'check 'check-chdir
(lambda _ (chdir #$output))))))
(propagated-inputs
(list python-click ;XXX required by python-dask
python-cloudpickle
python-dask
python-gatspy
python-joblib
python-numpy
python-pandas
python-scikit-learn
python-scipy
python-toolz))
(native-inputs (list python-cython python-pytest python-setuptools-scm))
(home-page "https://pypi.org/project/cesium/")
(synopsis "Library for time-series feature extraction and processing")
(description
"Cesium is a library for time-series feature extraction and processing.")
(license license:bsd-3)))
(define-public python-translitcodec
(package
(name "python-translitcodec")
(version "0.4.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "translitcodec" version))
(sha256
(base32
"10x6pvblkzky1zhjs8nmx64nb9jdzxad4bxhq4iwv0j4z2aqjnki"))))
(build-system python-build-system)
(arguments
`(#:tests? #f)) ; no tests provided
(home-page
"https://github.com/claudep/translitcodec")
(synopsis
"Unicode to 8-bit charset transliteration codec")
(description
"This package contains codecs for transliterating ISO 10646 texts into
best-effort representations using smaller coded character sets (ASCII,
ISO 8859, etc.).")
(license license:expat)))
(define-public python-anyqt
(package
(name "python-anyqt")
(version "0.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "AnyQt" version))
(sha256
(base32 "0fvnhdk0nzhlm1xydisvdq1w7lwaakdkbwb1rkyz4vd232wji4jb"))))
(build-system python-build-system)
(arguments
`(#:tests? #f ;there are no tests
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'delete-files
;; Delete files related to other operating systems.
(lambda _
(delete-file "AnyQt/QtMacExtras.py")
(delete-file "AnyQt/QtWinExtras.py"))))))
(home-page "https://github.com/ales-erjavec/anyqt")
(synopsis "PyQt4/PyQt5 compatibility layer")
(description "AnyQt is a PyQt4/PyQt5 compatibility layer.")
(license license:gpl3)))
(define-public python-pyqtgraph
(package
(name "python-pyqtgraph")
(version "0.13.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pyqtgraph" version))
(sha256
(base32 "1kiazyc8mqyx0479qdcvdclzq0g1hpp93dyq8444w1f72628s42q"))))
(build-system pyproject-build-system)
(arguments
;; This test fails. It suggests to disable assert rewriting in Pytest,
;; but it still doesn't pass.
(list #:test-flags #~'("-k" "not test_reload")
#:phases
#~(modify-phases %standard-phases
(add-before 'check 'set-qpa
(lambda _
(setenv "QT_QPA_PLATFORM" "offscreen"))))))
(native-inputs
(list python-pytest python-pytest-cov python-pytest-xdist))
(inputs
(list qtbase-5))
(propagated-inputs
(list python-h5py python-numpy python-pyopengl python-scipy
python-pyqt))
(home-page "https://www.pyqtgraph.org")
(synopsis "Scientific graphics and GUI library for Python")
(description
"PyQtGraph is a Pure-python graphics library for PyQt5, PyQt6, PySide2
and PySide6. It is intended for use in mathematics, scientific or engineering
applications.")
(license license:expat)))
(define-public python-qasync
(package
(name "python-qasync")
(version "0.27.1")
(source
(origin
;; There are no tests in the PyPI tarball.
(method git-fetch)
(uri (git-reference
(url "https://github.com/CabbageDevelopment/qasync/")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0j6ksfnq9qfjdfppbkdz7jh6w0gnslwnckhafmlgim29b25g0z51"))))
(build-system pyproject-build-system)
(arguments
(list #:phases
#~(modify-phases %standard-phases
(add-before 'check 'set-qpa
(lambda _
(setenv "QT_QPA_PLATFORM" "offscreen"))))))
(native-inputs
(list python-poetry-core python-pytest))
(propagated-inputs
(list python-pyqt))
(home-page "https://github.com/CabbageDevelopment/qasync")
(synopsis "Implementation of the PEP 3156 Event-Loop with Qt")
(description
"@code{qasync} allows coroutines to be used in PyQt/PySide applications
by providing an implementation of the PEP 3156 event-loop.")
(license license:bsd-2)))
(define-public python-editor
(package
(name "python-editor")
(version "1.0.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "python-editor" version))
(sha256
(base32
"0yrjh8w72ivqxi4i7xsg5b1vz15x8fg51xra7c3bgfyxqnyadzai"))))
(build-system python-build-system)
(arguments
'(#:tests? #f)) ;XXX: needs a TTY and an editor
(home-page "https://github.com/fmoo/python-editor")
(synopsis "Programmatically open an editor, capture the result")
(description
"python-editor is a library that provides the editor module for
programmatically interfacing with your system's $EDITOR.")
(license license:asl2.0)))
(define-public python-multiprocessing-logging
(package
(name "python-multiprocessing-logging")
(version "0.3.1")
(home-page "https://github.com/jruere/multiprocessing-logging")
(source (origin
(method git-fetch)
(uri (git-reference
(url home-page)
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1625wy3djlr3b2fpd3vi822f8gw6b75mnls5a4318dbi9za5pf0y"))))
(build-system python-build-system)
(synopsis "Manage logs from multiple processes")
(description
"This Python module implements a multiprocessing-aware @code{Handler}
that, when set on the root @code{Logger}, will tunnel log records to the
main process so that they are handled correctly.")
(license license:lgpl3+)))
(define-public python-vobject
(package
(name "python-vobject")
(version "0.9.6.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "vobject" version))
(sha256
(base32
"0081g4gngw28j7vw8101jk600wz4gzfrhf5myrqvn2mrfkn2llcn"))))
(build-system python-build-system)
(arguments
'(;; The test suite relies on some non-portable Windows interfaces.
#:tests? #f))
(propagated-inputs
(list python-dateutil python-pyicu))
(synopsis "Parse and generate vCard and vCalendar files")
(description "Vobject is intended to be a full featured Python package for
parsing and generating vCard and vCalendar files. Currently, iCalendar files
are supported and well tested. vCard 3.0 files are supported, and all data
should be imported, but only a few components are understood in a sophisticated
way.")
(home-page "https://eventable.github.io/vobject/")
(license license:asl2.0)))
(define-public python-munkres
(package
(name "python-munkres")
(version "1.1.4")
(source (origin
(method url-fetch)
(uri (pypi-uri "munkres" version))
(sha256
(base32
"00yvj8bxmhhhhd74v7j0x673is7vizmxwgb3dd5xmnkr74ybyi7w"))))
(arguments
(list
#:phases
'(modify-phases %standard-phases
(add-after 'unpack 'disable-test
(lambda _
;; See https://github.com/bmc/munkres/issues/40
(substitute* "test/test_munkres.py"
(("^def test_profit_float" m)
(string-append "\
import platform
@pytest.mark.skipif(platform.architecture()[0] == \"32bit\",
reason=\"Fails on 32 bit architectures\")
" m))))))))
(build-system python-build-system)
(native-inputs (list python-pytest))
(home-page "https://software.clapper.org/munkres/")
(synopsis "Implementation of the Munkres algorithm")
(description "The Munkres module provides an implementation of the Munkres
algorithm (also called the Hungarian algorithm or the Kuhn-Munkres algorithm),
useful for solving the Assignment Problem.")
(license license:bsd-3)))
(define-public python-whoosh
(package
(name "python-whoosh")
(version "2.7.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Whoosh" version))
(sha256
(base32
"10qsqdjpbc85fykc1vgcs8xwbgn4l2l52c8d83xf1q59pwyn79bw"))))
(build-system python-build-system)
(arguments '(#:tests? #f)) ; Test invocation is no longer supported by Python.
(native-inputs
(list python-pytest))
(home-page "https://bitbucket.org/mchaput/whoosh")
(synopsis "Full text indexing, search, and spell checking library")
(description
"Whoosh is a fast, pure-Python full text indexing, search, and spell
checking library.")
(license license:bsd-2)))
(define-public python-codespell
(package
(name "python-codespell")
(version "2.2.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "codespell" version))
(sha256
(base32 "0mmynpblhwbja0vmzbmbb9cgpxdl7b0lxaf9h2zr5dpddvgsv7vd"))))
(build-system pyproject-build-system)
(inputs
(list python-chardet))
(native-inputs
(list python-flake8
python-pygments
python-pytest
python-pytest-cov
python-pytest-dependency
python-tomli))
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key outputs tests? #:allow-other-keys)
(when tests?
;; Make installed executable available for running the tests.
(setenv "PATH"
(string-append (assoc-ref outputs "out") "/bin"
":" (getenv "PATH")))
(invoke "pytest" "-vv")))))))
(home-page "https://github.com/codespell-project/codespell/")
(synopsis "Spellchecker for code")
(description "Codespell fixes common misspellings in text files.
It's designed primarily for checking misspelled words in source code,
but it can be used with other files as well. It does not check for word
membership in a complete dictionary, but instead looks for a set of
common misspellings. Therefore it should catch errors like \"adn\", but
it will not catch \"adnasdfasdf\". This also means it shouldn't
generate false-positives when you use a niche term it doesn't know
about.")
(license
(list
; for codespell and codespell_lib
license:gpl2
; for dictionary*.txt
license:cc-by-sa3.0))))
(define-public python-pathlib
(package
(name "python-pathlib")
(version "1.0.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "pathlib" version))
(sha256
(base32
"17zajiw4mjbkkv6ahp3xf025qglkj0805m9s41c45zryzj6p2h39"))))
(build-system python-build-system)
;; The tests depend on the internal "test" module, which does not provide
;; a stable interface.
(arguments `(#:tests? #f))
(home-page "https://pathlib.readthedocs.org/")
(synopsis "Object-oriented file system paths")
(description "Pathlib offers a set of classes to handle file system paths.
It offers the following advantages over using string objects:
@enumerate
@item No more cumbersome use of os and os.path functions. Everything can
be done easily through operators, attribute accesses, and method calls.
@item Embodies the semantics of different path types. For example,
comparing Windows paths ignores casing.
@item Well-defined semantics, eliminating any inconsistencies or
ambiguities (forward vs. backward slashes, etc.).
@end enumerate
Note: In Python 3.4, pathlib is now part of the standard library. For other
Python versions please consider python-pathlib2 instead, which tracks the
standard library module. This module (python-pathlib) isn't maintained
anymore.")
(license license:expat)))
(define-public python-jellyfish
(package
(name "python-jellyfish")
(version "0.8.8")
(source (origin
(method url-fetch)
(uri (pypi-uri "jellyfish" version))
(sha256
(base32
"0p2s6b30sfffx8sya2i8kz0i0riw9fq1fi0k89s8kdgrmjf0h1h5"))))
(build-system python-build-system)
(arguments
`(#:tests? #f ; XXX: Tests cannot find C coded version.
#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key inputs outputs tests? #:allow-other-keys)
(when tests?
(add-installed-pythonpath inputs outputs)
(invoke "pytest" "-vv" "jellyfish/test.py")))))))
(native-inputs
(list python-pytest))
(home-page "https://github.com/jamesturk/jellyfish")
(synopsis "Approximate and phonetic matching of strings")
(description "Jellyfish uses a variety of string comparison and phonetic
encoding algorithms to do fuzzy string matching.")
(license license:bsd-2)))
(define-public python-pdfminer-six
(package
(name "python-pdfminer-six")
(version "20231228")
;; There are no tests in the PyPI tarball.
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/pdfminer/pdfminer.six")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "1anyr0gm7amwls8qifflql1viz5rq6q95lfwcg43v3180h4w8wrd"))))
(build-system pyproject-build-system)
(arguments
(list #:phases
#~(modify-phases %standard-phases
;; Tests write to the source tree.
(add-after 'unpack 'make-git-checkout-writable
(lambda _
(for-each make-file-writable (find-files ".")))))))
(propagated-inputs
(list python-charset-normalizer python-cryptography))
(native-inputs
(list python-pytest))
(home-page "https://github.com/pdfminer/pdfminer.six")
(synopsis "PDF parser and analyzer")
(description "@code{pdfminer.six} is a community maintained fork of
the original PDFMiner. It is a tool for extracting information from PDF
documents. It focuses on getting and analyzing text data. Pdfminer.six
extracts the text from a page directly from the sourcecode of the PDF. It
can also be used to get the exact location, font or color of the text.")
(license license:expat)))
(define-public python-rarfile
(package
(name "python-rarfile")
(version "4.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "rarfile" version))
(sha256
(base32
"1882wv9szcm29mnyhjmspyflyr2l7z73srn14w4dlnww49lqfm37"))))
(build-system python-build-system)
(arguments
`(#:tests? #f ;; The bsdtar utility is very limited and most tests fail.
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch
(lambda* (#:key inputs #:allow-other-keys)
(substitute* "rarfile.py"
;; Disable unrar and unar, which are unavailable on Guix.
(("(unrar|unar)=True" all tool) (string-append tool "=False"))
;; Hardcode path to bsdtar
(("\"bsdtar\"")
(string-append "\"" (assoc-ref inputs "libarchive") "/bin/bsdtar\"")))
#t))
(replace 'check
(lambda* (#:key inputs tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv")))))))
(native-inputs (list python-pytest))
(inputs (list libarchive))
(home-page "https://github.com/markokr/rarfile")
(synopsis "RAR archive reader for Python")
(description "This is Python module for RAR archive reading. The interface
is made as zipfile like as possible.")
(license license:isc)))
(define-public python-slugid
(package
(name "python-slugid")
(version "2.0.0")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/taskcluster/slugid.py")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1h64p2jlqv6lsmw8h2j203kx3bhv72cwzpk5gdhsaamw30cp3h1i"))))
(build-system python-build-system)
(native-inputs (list python-nose))
(arguments
(list #:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key inputs tests? #:allow-other-keys)
(when tests?
;; The project uses tox to run the tests via nose.
(invoke "nosetests" "-v" "test.py")))))))
(home-page "http://taskcluster.github.io/slugid.py")
(synopsis "Module for Base64 encoded UUID v4 slugs")
(description "This package provides a module for generating v4
UUIDs and encoding them into 22 character URL-safe base64 slug
representation.")
(license license:mpl2.0)))
(define-public python-rich
(package
(name "python-rich")
(version "12.4.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "rich" version))
(sha256
(base32
"149vjb4cpf9mz14iig0b6d8065dm8aslp6pc45g9ipmp1wf00ffj"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key inputs tests? #:allow-other-keys)
(when tests?
(copy-recursively (string-append
(assoc-ref inputs "tests") "/tests")
"tests")
(invoke "python" "-m" "pytest" "-vv")))))))
(propagated-inputs
(list python-attrs python-colorama python-commonmark python-pygments
python-typing-extensions))
(native-inputs
`(("python-pytest" ,python-pytest)
("tests"
;; The release on pypi comes without tests. We can't build from this
;; checkout, though, because installation requires an invocation of
;; poetry.
,(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/willmcgugan/rich")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"17c3gljn8zv32xnpsgd3fqgqn4r7cdfqri41hridcpbhssdgkyp9"))))))
(home-page "https://github.com/willmcgugan/rich")
(synopsis "Render rich text and more to the terminal")
(description
"This is a Python package for rendering rich text, tables, progress bars,
syntax highlighting, markdown and more to the terminal.")
(license license:expat)))
(define-public python-rich-click
(package
(name "python-rich-click")
(version "1.6.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "rich-click" version))
(sha256
(base32
"0zkp2sn0vz1hhjbv9bf8fifyzi8ib2d7v7sfak8n3qn67rlrdzzq"))))
(build-system python-build-system)
(propagated-inputs
(list python-click python-importlib-metadata python-rich))
(native-inputs (list python-pre-commit))
(home-page "https://github.com/ewels/rich-click")
(synopsis "Format click help output nicely with rich")
(description "Click is a \"Python package for creating beautiful command
line interfaces\". Rich is a \"Python library for rich text and beautiful
formatting in the terminal\". The intention of rich-click is to provide
attractive help output from click, formatted with rich, with minimal
customization required.")
(license license:expat)))
(define-public python-textual
(package
(name "python-textual")
(version "0.1.18")
(source (origin
(method url-fetch)
(uri (pypi-uri "textual" version))
(sha256
(base32
"08yg5a51hz1axfj5hx28hx31gq5apcj6vpkkmawmiplisa73z25j"))))
(build-system python-build-system)
(arguments
(let ((tests
;; The release on pypi comes without tests. We can't build
;; from this checkout, though, because installation requires
;; an invocation of poetry.
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/Textualize/textual")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0b3ycwqhp21mg9fvmadgxhgbvkwq6fd784l2xcmvy77rravrnnax")))))
(list #:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(copy-recursively #$(file-append tests "/tests")
"tests")
(invoke "python" "-m" "pytest" "-vv"))))))))
(propagated-inputs
(list python-rich python-typing-extensions))
(native-inputs
(list python-pytest))
(home-page "https://github.com/Textualize/textual")
(synopsis "Build text user interfaces in Python")
(description "Textual is a @acronym{TUI, Text User Interface} framework
for Python inspired by modern web development.")
(license license:expat)))
(define-public python-magic
(package
(name "python-magic")
(version "0.4.27")
(home-page "https://github.com/ahupp/python-magic")
(source
(origin
(method git-fetch)
(uri (git-reference (url home-page) (commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"1x11kfn4g244fia9a7y4ly8dqv5zsxfg3l5azc54dl6gkp2bk7vx"))
(modules '((guix build utils)))
;; Adjust expected output for file@5.45.
(snippet #~(substitute* "test/libmagic_test.py"
(("PDF document, version 1\\.2, 2 pages")
"PDF document, version 1.2, 2 page(s)")))))
(build-system python-build-system)
(arguments
'(#:phases (modify-phases %standard-phases
;; Replace a specific method call with a hard-coded
;; path to the necessary libmagic.so file in the
;; store. If we don't do this, then the method call
;; will fail to find the libmagic.so file, which in
;; turn will cause any application using
;; python-magic to fail.
(add-before 'build 'hard-code-path-to-libmagic
(lambda* (#:key inputs #:allow-other-keys)
(let ((magic (search-input-file inputs "/lib/libmagic.so")))
(substitute* "magic/loader.py"
(("find_library\\('magic'\\)")
(string-append "'" magic "'"))))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
;; The test suite mandates this variable.
(setenv "LC_ALL" "C.UTF-8")
(if tests?
(with-directory-excursion "test"
(invoke "python" "./libmagic_test.py"))
(format #t "test suite not run~%")))))))
(native-inputs
(list which))
(inputs
;; python-magic needs to be able to find libmagic.so.
(list file))
(synopsis "File type identification using libmagic")
(description
"This module uses ctypes to access the libmagic file type
identification library. It makes use of the local magic database and
supports both textual and MIME-type output. Note that this module and
the python-file module both provide a \"magic.py\" file; these two
modules, which are different and were developed separately, both serve
the same purpose: to provide Python bindings for libmagic.")
(license license:expat)))
(define-public s3cmd
(package
(name "s3cmd")
(version "2.3.0")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/s3tools/s3cmd")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0rdgwwmmp8mdxc84bxq6k9a7v7z2qgc3df47djzs2b84gw81dglx"))))
(build-system python-build-system)
(arguments
(list #:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'hide-wrapping
(lambda _
(substitute* "S3/MultiPart.py"
(("sys\\.argv\\[0\\]") "\"s3cmd\""))
(substitute* "s3cmd"
(("optparser\\.get_prog_name\\(\\)") "\"s3cmd\"")))))))
(inputs
(list python-dateutil
python-magic))
(home-page "https://s3tools.org/s3cmd")
(synopsis "Command line tool for S3-compatible storage services")
(description
"S3cmd is a command line tool for uploading, retrieving and managing data
in storage services that are compatible with the Amazon Simple Storage
Service (S3) protocol, including S3 itself. It supports rsync-like backup,
GnuPG encryption, and more. It also supports management of Amazon's
CloudFront content delivery network.")
(license license:gpl2+)))
(define-public python-pkgconfig
(package
(name "python-pkgconfig")
(version "1.3.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pkgconfig" version))
(sha256
(base32
"107x2wmchlch8saixb488cgjz9n6inl38wi7nxkb942rbaapxiqb"))))
(build-system python-build-system)
(native-inputs
(list python-nose))
(inputs
(list pkg-config))
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'build 'patch
;; Hard-code the path to pkg-config.
(lambda _
(substitute* "pkgconfig/pkgconfig.py"
(("'pkg-config'")
(string-append "'" (which "pkg-config") "'")))))
(replace 'check
(lambda _
(invoke "nosetests" "test.py"))))))
(home-page "https://github.com/matze/pkgconfig")
(synopsis "Python interface for pkg-config")
(description "This module provides a Python interface to pkg-config. It
can be used to find all pkg-config packages, check if a package exists,
check if a package meets certain version requirements, query CFLAGS and
LDFLAGS and parse the output to build extensions with setup.py.")
(license license:expat)))
(define-public python-bz2file
(package
(name "python-bz2file")
(version "0.98")
(source
(origin
(method url-fetch)
(uri (pypi-uri "bz2file" version))
(sha256
(base32
"126s53fkpx04f33a829yqqk8fj4png3qwg4m66cvlmhmwc8zihb4"))))
(build-system python-build-system)
(arguments
`(#:tests? #f)) ; Tests use deprecated python modules.
(home-page "https://github.com/nvawda/bz2file")
(synopsis "Read and write bzip2-compressed files")
(description
"Bz2file is a Python library for reading and writing bzip2-compressed
files. It contains a drop-in replacement for the I/O interface in the
standard library's @code{bz2} module, including features from the latest
development version of CPython that are not available in older releases.")
(license license:asl2.0)))
(define-public python-future
(package
(name "python-future")
(version "0.18.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "future" version))
(sha256
(base32
"0zakvfj87gy6mn1nba06sdha63rn4njm7bhh0wzyrxhcny8avgmi"))))
(build-system python-build-system)
;; Many tests connect to the network or are otherwise flawed.
;; https://github.com/PythonCharmers/python-future/issues/210
(arguments
`(#:tests? #f
#:phases
(modify-phases %standard-phases
(replace 'sanity-check
(let ((sanity-check (assoc-ref %standard-phases 'sanity-check)))
(lambda* (#:key inputs outputs #:allow-other-keys #:rest args)
(let* ((files (find-files (site-packages inputs outputs)
"top_level\\.txt"))
(backups (map (lambda (f) (string-append f ".bak"))
files)))
(for-each copy-file files backups)
(substitute* files
;; Nobody be usin' winreg on Guix
;; Also, don't force users to have tkinter when they don't
;; need it
(("(winreg|tkinter)") ""))
(apply sanity-check args)
(for-each rename-file backups files))))))))
(home-page "https://python-future.org")
(synopsis "Single-source support for Python 3 and 2")
(description
"@code{python-future} is the missing compatibility layer between Python 2 and
Python 3. It allows you to use a single, clean Python 3.x-compatible codebase
to support both Python 2 and Python 3 with minimal overhead.")
(license license:expat)))
(define-public python-cysignals
(package
(name "python-cysignals")
(version "1.11.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "cysignals" version))
(sha256
(base32 "1hrqn976xhrq189x1086f3z9vzznjx21wsm3hqf90zx0alg347hg"))))
(build-system python-build-system)
(arguments
`(#:modules ((guix build python-build-system)
((guix build gnu-build-system) #:prefix gnu:)
(guix build utils))
;; FIXME: Tests are executed after installation and currently fail
;; when not installing into standard locations; the author is working
;; on a fix.
#:tests? #f
#:phases (modify-phases %standard-phases
(add-before 'build 'configure
(assoc-ref gnu:%standard-phases 'configure)))))
(native-inputs (list python-cython-3 python-sphinx))
(inputs (list pari-gp))
(home-page "https://github.com/sagemath/cysignals")
(synopsis "Handling of interrupts and signals for Cython")
(description
"The cysignals package provides mechanisms to handle interrupts (and
other signals and errors) in Cython code, using two related approaches,
for mixed Cython/Python code or external C libraries and pure Cython code,
respectively.")
(license license:lgpl3+)))
(define-public python-rope
(package
(name "python-rope")
(version "1.1.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "rope" version))
(sha256
(base32
"0bkzwkllxxdxd3w70xiy137lqvnlmmaplsc2ya3s23ss4kq8y10k"))))
(build-system python-build-system)
(arguments
(list #:phases
`(modify-phases %standard-phases
(add-after 'unpack 'disable-broken-test
(lambda _
(substitute* "ropetest/contrib/autoimporttest.py"
(("def test_search_module")
"def __notest_search_module")
(("def test_search_submodule")
"def __notest_search_submodule")))))))
(native-inputs
(list python-pytest-timeout
python-pytest))
(home-page "https://github.com/python-rope/rope")
(synopsis "Refactoring library for Python")
(description "Rope is a refactoring library for Python. It facilitates
the renaming, moving and extracting of attributes, functions, modules, fields
and parameters in Python source code. These refactorings can also be applied
to occurrences in strings and comments.")
(license license:lgpl3+)))
(define-public python-py3status
(package
(name "python-py3status")
(version "3.50")
(source
(origin
(method url-fetch)
(uri (pypi-uri "py3status" version))
(sha256
(base32 "0j2dx9lzpic15r8p0r0s3jmcskxpacahxl640b4864ldn5rlnh9d"))))
(build-system python-build-system)
(inputs
(list file))
(arguments
'(#:phases
(modify-phases %standard-phases
;; 'file' is used for detection of configuration file encoding
;; let's make link the dependency to particular input
(add-before 'build 'patch-file-path
(lambda* (#:key inputs #:allow-other-keys)
(let ((file-path (assoc-ref inputs "file")))
(substitute* "py3status/parse_config.py"
(("\\[\"file\", \"-b\"")
(string-append "['" file-path "/bin/file', '-b'")))
#t))))
#:tests? #f)) ; TODO: Requires many libraries not in Guix.
(home-page "https://github.com/ultrabug/py3status")
(synopsis "Extensible i3status wrapper written in Python")
(description "py3status is an i3status wrapper which extends i3status
functionality in a modular way, allowing you to extend your panel with your
own code, responding to click events and updating clock every second.")
(license license:bsd-3)))
(define-public python-tblib
(package
(name "python-tblib")
(version "1.6.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "tblib" version))
(sha256
(base32
"0i136n5pydmd202254wzrdbspkw0br0c9mbxhfs9hpfbahvyx6r2"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "py.test" "-vv" "tests" "README.rst"))))))
(native-inputs
(list python-pytest python-six))
(home-page "https://github.com/ionelmc/python-tblib")
(synopsis "Traceback serialization library")
(description
"Traceback serialization allows you to:
@enumerate
@item Pickle tracebacks and raise exceptions with pickled tracebacks in
different processes. This allows better error handling when running code over
multiple processes (imagine multiprocessing, billiard, futures, celery etc).
@item Parse traceback strings and raise with the parsed tracebacks.
@end enumerate\n")
(license license:bsd-3)))
(define-public python-tftpy
(package
(name "python-tftpy")
(version "0.8.2")
(source
(origin
(method git-fetch) ;no tests in PyPI archive
(uri (git-reference
(url "https://github.com/msoulier/tftpy")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"1gl04ps8h8r7av3h0zbm8gwmkqs9rkk5vf7n8mv2bzrkwvy9hacc"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? inputs outputs #:allow-other-keys)
(when tests?
;; The default DEBUG logging level is way too verbose.
(substitute* "t/test.py"
(("logging\\.DEBUG")
"logging.INFO"))
(invoke "python" "-m" "unittest" "t/test.py")))))))
(home-page "https://tftpy.sourceforge.net/")
(synopsis "Python trivial file transfer protocol (TFTP) library")
(description "TFTPy is a trivial file transfer protocol (TFTP) Python
library. It can be used to act both as a TFTP client or TFTP server.")
(license license:expat)))
(define-public python-greenlet
(package
(name "python-greenlet")
(version "2.0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "greenlet" version))
(sha256
(base32 "0rqgxp1fai0fcyv46nd1389mxvk3ccixgdkwws70xnk08ib05rj2"))))
(build-system python-build-system)
(home-page "https://greenlet.readthedocs.io/")
(synopsis "Lightweight in-process concurrent programming")
(description
"Greenlet package is a spin-off of Stackless, a version of CPython
that supports micro-threads called \"tasklets\". Tasklets run
pseudo-concurrently (typically in a single or a few OS-level threads) and
are synchronized with data exchanges on \"channels\".")
(license (list license:psfl license:expat))))
(define-public python-objgraph
(package
(name "python-objgraph")
(version "3.4.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "objgraph" version))
(sha256
(base32
"19qmqsh984zq1rzzjy4vqnmviaqnymcyl8h7z99pnicbgwnm2adz"))))
(build-system python-build-system)
(propagated-inputs
(list python-graphviz))
(native-inputs
(list python-mock graphviz))
(home-page "https://mg.pov.lt/objgraph/")
(synopsis "Draw Python object reference graphs with graphviz")
(description
"This package provides tools to draw Python object reference graphs with
graphviz.")
(license license:expat)))
(define-public python-gevent
(package
(name "python-gevent")
(version "22.10.2")
(source (origin
(method url-fetch)
(uri (pypi-uri "gevent" version))
(sha256
(base32
"0ijwwm2yr7jgz8xs1rbvzj6gp7xw1pagf0i7g99b6dzffshiv80w"))
(modules '((guix build utils)))
(snippet
'(begin
;; unbunding libev and c-ares
(delete-file-recursively "deps")
;; Remove cythonized files.
(with-directory-excursion "src/gevent"
(for-each delete-file
(append (list "resolver/cares.c"
"queue.c"
"local.c"
"libev/corecext.h"
"libev/corecext.c"
"greenlet.c"
"event.c"
"_waiter.c"
"_tracer.c"
"_semaphore.c"
"_imap.c"
"_ident.c"
"_hub_primitives.c"
"_hub_local.c"
"_greenlet_primitives.c"
"_abstract_linkable.c")
(find-files "." "\\.html$"))))))))
(build-system python-build-system)
(arguments
`(#:modules ((ice-9 ftw)
(ice-9 match)
(srfi srfi-26)
(guix build utils)
(guix build python-build-system))
#:phases (modify-phases %standard-phases
(add-before 'patch-source-shebangs 'patch-hard-coded-paths
(lambda _
(substitute* "src/gevent/subprocess.py"
(("/bin/sh") (which "sh")))
(for-each (lambda (file)
(substitute* file
(("/bin/sh") (which "sh"))
(("/bin/true") (which "true"))))
(find-files "src/greentest" "\\.py$"))))
(add-before 'build 'do-not-use-bundled-sources
(lambda _
(setenv "GEVENTSETUP_EMBED" "0")
;; Prevent building bundled libev.
(substitute* "setup.py"
(("run_make=_BUILDING")
"run_make=False"))))
(add-before 'build 'add-greenlet-on-C_INCLUDE_PATH
(lambda* (#:key inputs #:allow-other-keys)
(let ((greenlet (string-append
(assoc-ref inputs "python-greenlet")
"/include")))
(match (scandir greenlet
(lambda (item)
(string-prefix? "python" item)))
((python)
(setenv "C_INCLUDE_PATH"
(string-append greenlet "/" python ":"
(or (getenv "C_INCLUDE_PATH")
""))))))))
(add-before 'check 'pretend-to-be-CI
(lambda _
;; A few tests are skipped due to network constraints or
;; get longer timeouts when running in a CI environment.
;; Piggy-back on that, as we need the same adjustments.
(setenv "TRAVIS" "1")
(setenv "APPVEYOR" "1")))
(add-before 'check 'adjust-tests
(lambda _
(let ((disabled-tests
'(;; These tests relies on networking which is
;; not available in the build container.
"test__getaddrinfo_import.py"
"test__server_pywsgi.py"
;; XXX: These tests borrow functionality from the
;; Python builtin 'test' module, but it is not
;; installed with the Guix Python distribution.
"test_smtpd.py"
"test_wsgiref.py"
"test_urllib2.py"
"test_thread.py"
"test_threading.py"
"test__threading_2.py"
;; These tests rely on KeyboardInterrupts which do not
;; work inside the build container for some reason
;; (lack of controlling terminal?).
"test_subprocess.py"
"test__issues461_471.py"
;; TODO: Patch out the tests that use getprotobyname, etc
;; instead of disabling all the tests from these files.
"test__resolver_dnspython.py"
"test__doctests.py"
"test__all__.py"
"test___config.py"
"test__execmodules.py"
;; This test contains 'test_unlink', which
;; fails on i686 (see:
;; https://github.com/gevent/gevent/issues/1558).
"test__core_stat.py")))
(call-with-output-file "skipped_tests.txt"
(lambda (port)
(format port "~a~%"
(string-join disabled-tests "\n")))))))
(replace 'check
(lambda _
;; Use the build daemons configured number of workers.
(setenv "NWORKERS" (number->string (parallel-job-count)))
(invoke "python" "-m" "gevent.tests" "-unone" "--config"
"known_failures.py" "--ignore" "skipped_tests.txt"))))))
(propagated-inputs
(list python-greenlet python-zope-event python-zope-interface))
(native-inputs
(list python-cython
;; For tests.
python-dnspython python-psutil python-objgraph))
(inputs
(list c-ares libev))
(home-page "https://www.gevent.org/")
(synopsis "Coroutine-based network library")
(description
"@code{gevent} is a coroutine-based Python networking library that uses
@code{greenlet} to provide a high-level synchronous API on top of the
@code{libev} event loop.")
(license license:expat)))
(define-public python-fastimport
(package
(name "python-fastimport")
(version "0.9.9")
(source
(origin
(method url-fetch)
(uri (pypi-uri "fastimport" version))
(sha256
(base32 "06gk14qgm9dxx3pzjn0ckdbywc8ial2bjfzddqwlr4bn1nnqkbll"))))
(build-system python-build-system)
(home-page "https://github.com/jelmer/python-fastimport")
(synopsis "VCS fastimport parser and generator in Python")
(description "This package provides a parser for and generator of the Git
@url{https://www.kernel.org/pub/software/scm/git/docs/git-fast-import.html,fastimport}
format.")
(license license:gpl2+)))
(define-public python-twisted
(package
(name "python-twisted")
(version "19.7.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "Twisted" version ".tar.bz2"))
(sha256
(base32
"17d3hnxv9qndagzz63mdpyk99xj63p9gq586vjn0rxk8cl197nym"))))
(build-system python-build-system)
(arguments
'(#:tests? #f ; FIXME: some tests fail
#:phases
(modify-phases %standard-phases
;; Remove scripts, because they depend on [conch]
(add-after 'unpack 'remove-entrypoint
(lambda _
(substitute* "src/twisted/python/_setup.py"
(("\".+ = twisted\\.conch\\.scripts\\..+\",") "")))))))
(propagated-inputs
(list python-zope-interface
python-pyhamcrest
python-incremental
python-hyperlink
python-constantly
python-automat))
(home-page "https://twistedmatrix.com/")
(synopsis "Asynchronous networking framework written in Python")
(description
"Twisted is an extensible framework for Python programming, with special
focus on event-based network programming and multiprotocol integration.")
(license license:expat)))
(define-public python-pika
(package
(name "python-pika")
(version "1.2.1")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/pika/pika")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"0sqj3bg6jwign8vwvn337fbwy69sm684ns1vh5kbfnskq4him9i2"))))
(build-system python-build-system)
(arguments
'(#:phases (modify-phases %standard-phases
(add-after 'unpack 'disable-live-tests
(lambda _
;; Disable tests that require RabbitMQ, which is not
;; yet available in Guix.
(substitute* "nose2.cfg"
(("tests=tests/unit,tests/acceptance")
"start-dir=tests/unit"))
(with-directory-excursion "tests"
(for-each delete-file
'("unit/base_connection_tests.py"
"unit/threaded_test_wrapper_test.py")))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(setenv "PYTHONPATH" (getcwd))
(invoke "nose2" "-v")))))))
(native-inputs
(list python-mock
python-nose2
;; These are optional at runtime, and provided here for tests.
python-gevent
python-tornado
python-twisted))
(home-page "https://pika.readthedocs.org")
(synopsis "Pure Python AMQP Client Library")
(description
"Pika is a pure-Python implementation of the AMQP (Advanced Message Queuing
Protocol) 0-9-1 protocol that tries to stay fairly independent of the underlying
network support library.")
(license license:bsd-3)))
(define-public python-ply
(package
(name "python-ply")
(version "3.11")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ply" version))
(sha256
(base32
"18qx113g9bi1ac4indd5phma82zcdq601lxncp3vjn43m2mc3iq0"))))
(build-system python-build-system)
(home-page "http://www.dabeaz.com/ply/")
(synopsis "Python Lex & Yacc")
(description "PLY is a @code{lex}/@code{yacc} implemented purely in Python.
It uses LR parsing and does extensive error checking.")
(license license:bsd-3)))
(define-public python-tabulate
(package
(name "python-tabulate")
(version "0.9.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "tabulate" version))
(sha256
(base32
"0g4b0qnbw55igbpxfxzciqvb6w8ncw4gmcgyq0lyavcnylmv3580"))))
(build-system pyproject-build-system)
(native-inputs (list python-pytest python-setuptools-scm))
(home-page "https://bitbucket.org/astanin/python-tabulate")
(synopsis "Pretty-print tabular data")
(description
"Tabulate is a library and command-line utility to pretty-print tabular
data in Python.")
(license license:expat)))
(define-public python-kazoo
(package
(name "python-kazoo")
(version "2.8.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "kazoo" version))
(sha256
(base32
"1zpj5cc8624w6i0pxgcxqkjwbkm4pkrv19d7wh5df3jais32g3jq"))))
(build-system python-build-system)
(arguments '(#:tests? #f)) ; XXX: needs zookeeper
(propagated-inputs
(list python-six))
(home-page "https://kazoo.readthedocs.org")
(synopsis "High-level Zookeeper client library")
(description
"Kazoo is a Python client library for the Apache Zookeeper distributed
application service. It is designed to be easy to use and to avoid common
programming errors.")
(license license:asl2.0)))
(define-public python-pykafka
(package
(name "python-pykafka")
(version "2.4.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "pykafka" version))
(sha256
(base32
"1id6sr159p6aa13bxcqyr9gln8sqg1l0ddzns5iws8kk5q1p5cfv"))))
(build-system python-build-system)
(arguments '(#:tests? #f)) ; XXX: needs zookeeper, kafka, etc.
(propagated-inputs
(list python-gevent python-kazoo python-tabulate))
(inputs
(list librdkafka))
(home-page "https://pykafka.readthedocs.io/")
(synopsis "Apache Kafka client for Python")
(description
"PyKafka is a client for the Apache Kafka distributed messaging system.
It includes Python implementations of Kafka producers and consumers, which
are optionally backed by a C extension built on librdkafka.")
(license license:asl2.0)))
(define-public python-wcwidth
(package
(name "python-wcwidth")
(version "0.1.8")
(source (origin
(method url-fetch)
(uri (pypi-uri "wcwidth" version))
(sha256
(base32
"1a1pzds3xzfylm5mnc5f6c1p8kiig0daqjc9gygd9rc3cj53x2zj"))))
(build-system python-build-system)
(home-page "https://github.com/jquast/wcwidth")
(synopsis "Measure number of terminal column cells of wide-character codes")
(description "Wcwidth measures the number of terminal column cells of
wide-character codes. It is useful for those implementing a terminal emulator,
or programs that carefully produce output to be interpreted by one. It is a
Python implementation of the @code{wcwidth} and @code{wcswidth} C functions
specified in POSIX.1-2001 and POSIX.1-2008.")
(license license:expat)))
(define-public python-chai
(package
(name "python-chai")
(version "1.1.2")
(source (origin
(method url-fetch)
(uri (pypi-uri "chai" version))
(sha256
(base32
"1k6n6zbgrrs83crp6mr3yqj9zlv40b8rpisyrliwsq7naml2p3gz"))
(patches (search-patches "python-chai-drop-python2.patch"))))
(build-system python-build-system)
(home-page "https://github.com/agoragames/chai")
(synopsis "Mocking framework for Python")
(description
"Chai provides an api for mocking, stubbing and spying your python
objects, patterned after the Mocha library for Ruby.")
(license license:bsd-3)))
(define-public python-inflect
(package
(name "python-inflect")
(version "6.0.4")
(source (origin
(method url-fetch)
(uri (pypi-uri "inflect" version))
(sha256
(base32
"1sqj4svg2vbn4vq332nxnvky2433rgxbvjd529lddjmn2yd68hhq"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
'(list "--ignore=_custom_build/backend.py"
"-k" "not mypy-status")
#:phases
'(modify-phases %standard-phases
;; The build system insists on ignoring the existing environment and
;; running "pip install".
(add-after 'unpack 'do-not-use-pip-install
(lambda _
(substitute* "pyproject.toml"
(("^build-backend.*") "\
build-backend = \"backend\"
backend_path = [\"_custom_build\"]\n")
(("requires = .*") "requires = []\n"))
(mkdir-p "_custom_build")
(with-output-to-file "_custom_build/backend.py"
(lambda _
(display "\
from setuptools import build_meta as _orig
from setuptools.build_meta import *
def get_requires_for_build_wheel(config_settings=None):
return []
def get_requires_for_build_sdist(config_settings=None):
return []
")))
(setenv "PYTHONPATH"
(string-append (getcwd) "/_custom_build")))))))
(propagated-inputs (list python-pydantic))
(native-inputs (list python-flake8
python-pygments
python-pytest
python-pytest-black
python-pytest-checkdocs
python-pytest-cov
python-pytest-enabler
python-pytest-flake8
python-pytest-mypy
;; For the version number
python-setuptools-scm))
(home-page "https://github.com/jaraco/inflect")
(synopsis "Correctly generate plurals, singular nouns, ordinals, indefinite articles")
(description
"This Python module lets you correctly generate plurals, singular nouns,
ordinals, indefinite articles; it also can convert numbers to words.")
(license license:expat)))
(define-public python-inflection
(package
(name "python-inflection")
(version "0.3.1")
(source
(origin (method url-fetch)
(uri (pypi-uri "inflection" version))
(sha256
(base32
"1jhnxgnw8y3mbzjssixh6qkc7a3afc4fygajhqrqalnilyvpzshq"))))
(build-system python-build-system)
(native-inputs
(list python-pytest))
(home-page "https://github.com/jpvanhal/inflection")
(synopsis "Python string transformation library")
(description
"Inflection is a string transformation library. It singularizes
and pluralizes English words, and transforms strings from CamelCase to
underscored string.")
(license license:expat)))
(define-public python-krb5
(package
(name "python-krb5")
(version "0.5.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "krb5" version))
(sha256
(base32 "1jivws8dsscsmyqngbc71r4qw8qmn98pqmhylz01r5dd1ljfw9bi"))))
(build-system pyproject-build-system)
(inputs (list mit-krb5))
(native-inputs (list python-cython python-k5test python-pytest))
(home-page "https://github.com/jborean93/pykrb5")
(synopsis "Kerberos API bindings for Python")
(description "This library provides Python functions that wraps the
Kerberos 5 C API.")
(license license:expat)))
(define-public python-pylev
(package
(name "python-pylev")
(version "1.3.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "pylev" version))
(sha256
(base32
"1hz1x9blsbxya1y9nnhnwwdnqmakxi9mc0jkwj0rn6b1h44i0f86"))))
(build-system python-build-system)
(home-page "https://github.com/toastdriven/pylev")
(synopsis "Levenshtein distance implementation in Python")
(description "Pure Python Levenshtein implementation, based off the
Wikipedia code samples at
@url{http://en.wikipedia.org/wiki/Levenshtein_distance}.")
(license license:bsd-3)))
(define-public python-cleo
(package
(name "python-cleo")
(version "0.8.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "cleo" version))
(sha256
(base32
"17q6wi3q280kxmxzb2iwnnqih2xbljn18v0bjx2ip18p079j43ix"))))
(build-system python-build-system)
(native-inputs
(list ;; For testing
python-mock python-pytest-mock python-pytest))
(propagated-inputs
(list python-backpack python-clikit python-pastel python-pylev))
(home-page "https://github.com/sdispater/cleo")
(synopsis "Command-line arguments library for Python")
(description
"Cleo allows you to create command-line commands with signature in
docstring and colored output.")
(license license:expat)))
(define-public python-tomlkit
(package
(name "python-tomlkit")
(version "0.11.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "tomlkit" version))
(sha256
(base32 "0wsxnv9bs7jk8ig8blj9c438a1ygvdad7y9cn1zr720nfbjm5fbi"))))
(build-system python-build-system)
(native-inputs
(list python-pytest python-pyyaml))
(home-page "https://github.com/sdispater/tomlkit")
(synopsis "Style-preserving TOML library")
(description
"TOML Kit is a 1.0.0rc1-compliant TOML library. It includes a parser that
preserves all comments, indentations, whitespace and internal element ordering,
and makes them accessible and editable via an intuitive API. It can also
create new TOML documents from scratch using the provided helpers. Part of the
implementation has been adapted, improved, and fixed from Molten.")
(license license:expat)))
(define-public python-shellingham
(package
(name "python-shellingham")
(version "1.5.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "shellingham" version))
(sha256
(base32 "0iawv24xx6vhwbhqlxyyg901f8pf6abqyfg0711v1bvlipx83g21"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "python" "-m" "pytest" "-v")))))))
(native-inputs
(list python-pytest python-pytest-mock))
(home-page "https://github.com/sarugaku/shellingham")
(synopsis "Tool to detect surrounding shell")
(description
"Shellingham detects what shell the current Python executable is
running in.")
(license license:isc)))
(define-public python-shshsh
(package
(name "python-shshsh")
(version "1.0.5")
(source
(origin
(method git-fetch)
(uri
(git-reference
(url "https://github.com/zqqqqz2000/shshsh")
(commit
"fd21c8696aebaae04507760c16cb45979291fef5")))
(file-name (git-file-name name version))
(sha256
(base32
"1wzqyj1a6jj6cyv5ymzy834qm2lyq80yy1kfz0q0zayq9gm1cj7f"))))
(build-system pyproject-build-system)
(native-inputs
(list python-poetry-core
python-pytest
python-tox))
(home-page "https://github.com/zqqqqz2000/shshsh")
(synopsis "Write Shell commands simply and safely within Python")
(description "This package provides a way to write Shell commands from
within Python. Python functions can be chained together to process input
Bash control characters are escapted so that parameters can be passed
without worrying about command injection.")
(license license:expat)))
(define-public python-memcached
(package
(name "python-memcached")
(version "1.59")
(source
(origin
(method url-fetch)
(uri (pypi-uri "python-memcached" version))
(sha256
(base32
"0kvyapavbirk2x3n1jx4yb9nyigrj1s3x15nm3qhpvhkpqvqdqm2"))
(patches (search-patches "python-memcached-syntax-warnings.patch"))))
(build-system python-build-system)
(propagated-inputs (list python-six))
(home-page
"https://github.com/linsomniac/python-memcached")
(synopsis "Pure python memcached client")
(description
"This software is a pure Python interface to the memcached memory cache
daemon. It is the client side software which allows storing values in one or
more, possibly remote, memcached servers.")
(license license:psfl)))
(define-public python-mergedeep
(package
(name "python-mergedeep")
(version "1.3.4")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/clarketm/mergedeep")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1msvvdzk33sxzgyvs4fs8dlsrsi7fjj038z83s0yw5h8m8d78469"))))
(build-system python-build-system)
(native-inputs (list python-pytest))
(home-page "https://github.com/clarketm/mergedeep")
(synopsis "Deep merge function for Python")
(description "This package provides a deep merge function for Python,
useful to combine multiple data objects as one.")
(license license:expat)))
(define-public python-clikit
(package
(name "python-clikit")
(version "0.6.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "clikit" version))
(sha256
(base32
"0ngdkmb73gkp5y00q7r9k1cdlfn0wyzws2wrqlshc4hlkbdyabj4"))))
(build-system python-build-system)
(arguments '(#:tests? #f)) ; no test in the PyPI tarball
(propagated-inputs
(list python-crashtest python-pastel python-pylev))
(home-page "https://github.com/sdispater/clikit")
(synopsis "Group of utilities to build command line interfaces")
(description
"CliKit is a group of utilities to build testable command line
interfaces.")
(license license:expat)))
(define-public python-msgpack-python
(package
(name "python-msgpack-python")
(version "0.5.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "msgpack-python" version))
(sha256
(base32
"16wh8qgybmfh4pjp8vfv78mdlkxfmcasg78lzlnm6nslsfkci31p"))))
(build-system python-build-system)
(home-page "https://msgpack.org/")
(synopsis "Package to deserialize messages in MessagePack binary format")
(description
"MessagePack is an efficient binary serialization format. It lets you
exchange data among multiple languages like JSON. But it's faster and
smaller. Small integers are encoded into a single byte, and typical short
strings require only one extra byte in addition to the strings themselves.")
(license license:asl2.0)))
(define-public python-cattrs
(package
(name "python-cattrs")
(version "22.1.0")
(source (origin
(method git-fetch) ;for tests
(uri (git-reference
(url "https://github.com/python-attrs/cattrs")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1n0h25gj6zd02kqyl040xpdvg4hpy1j92716sz0rg019xjqqijqb"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'adjust-for-older-attrs
;; Our older attrs package is using the 'attr' rather than 'attrs'
;; namespace.
;; TODO: Remove after python-attrs is updated to >= 21.4.0.
(lambda _
(substitute* (find-files "." "\\.py$")
(("from attrs\\b")
"from attr"))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
;; Do not use the 'pytest' binary as it hard-codes an older
;; python-hypothesis version near the beginning of its
;; GUIX_PYTHONPATH.
(invoke "python" "-m" "pytest" "-vv" "-c" "/dev/null" "tests"
"-n" (number->string (parallel-job-count))
;; This test requires orjson, which needs the maturin
;; build system and new Rust dependencies.
"--ignore" "tests/test_preconf.py")))))))
(native-inputs
(list python-hypothesis
python-immutables
python-msgpack
python-poetry-core
python-pymongo ;for the bson module
python-pytest
python-pytest-xdist))
(propagated-inputs
(list python-attrs
python-exceptiongroup
python-typing-extensions))
(home-page "https://github.com/python-attrs/cattrs")
(synopsis "Python library for structuring and unstructuring data")
(description "@code{cattrs} is an Python library for structuring and
unstructuring data. @code{cattrs} works best with @code{attrs} classes,
@code{dataclasses} and the usual Python collections, but other kinds of
classes can also be supported by manually registering converters.")
(license license:expat)))
(define-public python-cachy
(package
(name "python-cachy")
(version "0.3.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "cachy" version))
(sha256
(base32
"1cb9naly8ampzlky7h74n5wj628l7jkpsh0c0jz0namlrvs82r8q"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _ (invoke "pifpaf" "run" "memcached" "--port" "11211" "--"
"pytest"))))))
(native-inputs
(list memcached python-fakeredis python-flexmock python-pifpaf
python-pytest))
(propagated-inputs
(list python-memcached python-msgpack-python python-redis))
(home-page "https://github.com/sdispater/cachy")
(synopsis "Simple yet effective caching library")
(description
"Cachy provides a simple yet effective caching library. A simple but
powerful API: thread-safety; decorator syntax; support for memcached, redis,
database, file, dict stores. Cachy supports python versions 2.7+ and 3.2+.")
(license license:expat)))
(define-public poetry
(package
(name "poetry")
(version "1.1.12")
(source
(origin
(method url-fetch)
(uri (pypi-uri "poetry" version))
(sha256
(base32
"0rr54mvcfcv9cv6vw2122y28xvd2pwqpv2x8c8j5ayz3gwsy4rjw"))))
(build-system python-build-system)
(arguments
`(#:tests? #f ;PyPI does not have tests
#:phases
(modify-phases %standard-phases
(add-before 'build 'patch-setup-py
(lambda _
(substitute* "setup.py"
;; Relax some of the requirements.
(("(keyring>=21.2.0),<22.0.0" _ keyring) keyring)
(("(packaging>=20.4),<21.0" _ packaging) packaging)))))))
(propagated-inputs
(list python-cachecontrol
python-cachy
python-cleo
python-crashtest
python-entrypoints
python-html5lib
python-keyring
; Use of deprecated version of msgpack reported upstream:
; https://github.com/python-poetry/poetry/issues/3607
python-msgpack-transitional
python-packaging
python-pexpect
python-pip
python-pkginfo
python-poetry-core-1.0
python-requests
python-requests-toolbelt
python-shellingham
python-tomlkit
python-virtualenv))
(home-page "https://python-poetry.org")
(synopsis "Python dependency management and packaging made easy")
(description "Poetry is a tool for dependency management and packaging
in Python. It allows you to declare the libraries your project depends on and
it will manage (install/update) them for you.")
(license license:expat)))
(define-public python-pyproject-hooks
(package
(name "python-pyproject-hooks")
(version "1.0.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "pyproject_hooks" version))
(sha256
(base32
"1xaf4sharvacqlav6w3b38nc4j0rzg0p4axi7zamanbzp6cb4wgj"))))
(build-system pyproject-build-system)
(native-inputs
(list python-flit-core
python-testpath
python-pytest))
(propagated-inputs (list python-tomli))
(home-page "https://github.com/pypa/pyproject-hooks")
(synopsis "Low-level library for calling @file{pyproject.toml} backends")
(description
"@code{pyproject-hooks} is a low-level library for calling build backends
in @file{pyproject.toml}-based projects. It provides basic functionality to
write tooling that generates distribution files from Python projects.")
(license license:expat)))
(define-public python-lark-parser
(package
(name "python-lark-parser")
(version "0.9.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "lark-parser" version))
(sha256
(base32
"1kd61asrb3h9spgsj4bslfbgp8q4271sw3hblk6f2vbbblv8jxcy"))))
(build-system python-build-system)
(home-page "https://github.com/lark-parser/lark")
(synopsis "Multi-language parser for Python")
(description
"Lark is a parser built with a focus on ergonomics, performance and
resilience. Lark can parse all context-free languages. That means it is
capable of parsing almost any programming language out there, and to
some degree most natural languages too.")
(license license:expat)))
(define-public python-libcst
(package
(name "python-libcst")
(version "0.3.8")
(source (origin
(method url-fetch)
(uri (pypi-uri "libcst" version))
(sha256
(base32
"05zsc61gsd2pyb6wiyh58zczndxi6rm4d2jl94rpf5cv1fzw6ks8"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'remove-failing-tests
(lambda _
;; Reported upstream: <https://github.com/Instagram/LibCST/issues/346>.
(delete-file "libcst/tests/test_fuzz.py")
;; Reported upstream: <https://github.com/Instagram/LibCST/issues/347>.
(delete-file "libcst/tests/test_pyre_integration.py")
(delete-file "libcst/codemod/tests/test_codemod_cli.py")
(delete-file "libcst/metadata/tests/test_full_repo_manager.py")
(delete-file "libcst/metadata/tests/test_type_inference_provider.py")))
(add-before 'check 'generate-test-data
(lambda _
(invoke "python" "-m" "libcst.codegen.generate" "visitors")
(invoke "python" "-m" "libcst.codegen.generate" "return_types")))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "python" "-m" "unittest")))))))
(native-inputs
(list python-black python-isort))
(propagated-inputs
(list python-typing-extensions python-typing-inspect python-pyyaml))
(home-page "https://github.com/Instagram/LibCST")
(synopsis "Concrete Syntax Tree (CST) parser and serializer library for Python")
(description
"LibCST parses Python source code as a CST tree that keeps all
formatting details (comments, whitespaces, parentheses, etc). It's useful
for building automated refactoring (codemod) applications and linters.
LibCST creates a compromise between an Abstract Syntax Tree (AST) and
a traditional Concrete Syntax Tree (CST). By carefully reorganizing and
naming node types and fields, LibCST creates a lossless CST that looks and
feels like an AST.")
(license (list license:expat
;; Some files unde libcst/_parser/ are under Python Software
;; Foundation license (see LICENSE file for details)
license:psfl
;; libcst/_add_slots.py
license:asl2.0))))
(define-public python-libcst-minimal
(hidden-package
(package
(inherit python-libcst)
(name "python-libcst-minimal")
(arguments '(#:tests? #f))
(native-inputs '()))))
(define-public python-typeapi
(package
(name "python-typeapi")
(version "2.1.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "typeapi" version))
(sha256
(base32 "1652fc04gn6nkw8izim0g7v586f64fla6clinp5xq9rf739w3cs9"))))
(build-system pyproject-build-system)
(arguments
(list
#:tests? #false ;there are none
#:phases
'(modify-phases %standard-phases
(add-after 'unpack 'patch-build-system
(lambda _
(substitute* "pyproject.toml"
(("^docs =.*") "docs = []\n")))))))
(propagated-inputs (list python-typing-extensions))
(native-inputs (list python-poetry-core))
(home-page "https://pypi.org/project/typeapi/")
(synopsis "Type hints")
(description "The typeapi package provides an object-oriented interface
for introspecting PEP484 type hints at runtime, including forward references
that make use of the more recent PEP585 and PEP604 type hint features in
Python versions that don't natively support them.")
(license license:expat)))
(define-public python-typing-inspect
(package
(name "python-typing-inspect")
(version "0.6.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "typing_inspect" version))
(sha256
(base32
"1dzs9a1pr23dhbvmnvms2jv7l7jk26023g5ysf0zvnq8b791s6wg"))
(patches (search-patches "python-typing-inspect-fix.patch"))))
(build-system python-build-system)
(propagated-inputs
(list python-mypy-extensions python-typing-extensions))
(home-page "https://github.com/ilevkivskyi/typing_inspect")
(synopsis "API for inspection of types in the Python @code{typing} module")
(description
"The @code{typing_inspect} module defines experimental API for runtime
inspection of types defined in the Python standard typing module.")
(license license:expat)))
(define-public python-lazy-loader
(package
(name "python-lazy-loader")
(version "0.4")
(source (origin
(method url-fetch)
(uri (pypi-uri "lazy_loader" version))
(sha256
(base32
"1lacaz292qxpgw6kxiirkx6sv9c5883nq4ssm3hs94cvb2153is7"))))
(build-system pyproject-build-system)
(native-inputs
(list python-numpy python-pytest))
(propagated-inputs
(list python-flit-core))
(home-page "https://scientific-python.org/specs/spec-0001/")
(synopsis "Load subpackages and functions on demand")
(description "@code{python-lazy-loader} makes it easy to load subpackages
and functions on demand. Its main features are:
@itemize
@item Allow subpackages to be made visible to users without incurring import
costs.
@item Allow external libraries to be imported only when used, improving import
times.
@end itemize")
(license license:bsd-3)))
(define-public python-lazy-object-proxy
(package
(name "python-lazy-object-proxy")
(version "1.5.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "lazy-object-proxy" version))
(sha256
(base32
"0hwh29m9wa582ramj30p4pysckdrmki1z1b8iaaxk6mpfx2kc8wp"))))
(native-inputs
(list python-setuptools-scm))
(build-system python-build-system)
(home-page "https://github.com/ionelmc/python-lazy-object-proxy")
(synopsis "Lazy object proxy for python")
(description
"Lazy object proxy is an object that wraps a callable but defers the call
until the object is actually required, and caches the result of said call.")
(license license:bsd-2)))
(define-public python-dnspython
(package
(name "python-dnspython")
(version "2.1.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "dnspython" version ".zip"))
(sha256
(base32
"1m0xvyby8baaxp6pfm0fgq8d2pq5dd8qm8bzfbrs009jaw5pza74"))))
(build-system python-build-system)
(arguments
`(#:tests? #f ; XXX: requires internet access
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch-getprotobyname-calls
;; These calls are problematic in the build environment as there is
;; no /etc/protocols. This breaks the sanity-check phase of any
;; package depnding on this one.
(lambda _
(substitute* "dns/rdtypes/IN/WKS.py"
(("socket.getprotobyname\\('tcp'\\)")
"6")
(("socket.getprotobyname\\('udp'\\)")
"17")))))))
(native-inputs (list unzip))
(home-page "https://www.dnspython.org")
(synopsis "DNS toolkit for Python")
(description
"dnspython is a DNS toolkit for Python. It supports almost all record
types. It can be used for queries, zone transfers, and dynamic updates.
It supports TSIG authenticated messages and EDNS0.")
(license license:expat)))
(define-public python-dnspython-1.16
(package
(inherit python-dnspython)
(version "1.16.0")
(source (origin
(method url-fetch)
(uri (string-append "http://www.dnspython.org/kits/"
version "/dnspython-" version ".tar.gz"))
(sha256
(base32
"1yaw7irazy42n0kdhlk7wyg8ki34rxcnc5xbc1wfwy245b0wbxab"))))
(native-inputs '())))
(define-public python-py3dns
(package
(name "python-py3dns")
(version "3.2.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "py3dns" version))
(sha256
(base32
"1r25f0ys5p37bhld7m7n4gb0lrysaym3w318w2f8bncq7r3d81qz"))))
(build-system python-build-system)
;; This package wants to read /etc/resolv.conf. We can't patch it without
;; removing functionality so we copy from Nix and "just don't build it".
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch-source
(lambda _
(substitute* "setup.py"
(("import DNS") "")
(("DNS.__version__") (string-append "\"" ,version "\"")))))
;; For the same reason, drop the sanity check because the library
;; fails to load without /etc/resolv.conf.
(delete 'sanity-check))
#:tests? #f)) ; Also skip the tests.
(home-page "https://launchpad.net/py3dns")
(synopsis "Python 3 DNS library")
(description "This Python 3 module provides a DNS API for looking up DNS
entries from within Python 3 modules and applications. This module is a
simple, lightweight implementation.")
(license license:psfl)))
(define-public python-email-validator
(package
(name "python-email-validator")
(version "1.0.2")
(source
(origin (method url-fetch)
(uri (pypi-uri "email_validator" version))
(sha256
(base32
"1ja9149l9ck5n45a72h3is7v476hjny5ybxbcamx1nw6iplsm7k6"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(add-before 'build 'use-dnspython
(lambda _
(substitute* "setup.py"
(("dnspython3") "dnspython"))
#t)))))
(propagated-inputs
(list python-dnspython python-idna))
(home-page "https://github.com/JoshData/python-email-validator")
(synopsis "Email address validation library for Python")
(description
"This library validates email address syntax and deliverability.")
(license license:cc0)))
(define-public python-ukpostcodeparser
(package
(name "python-ukpostcodeparser")
(version "1.1.2")
(source (origin
(method url-fetch)
(uri (pypi-uri "UkPostcodeParser" version))
(sha256
(base32
"03jkf1ygbwq3akzbcjyjk1akc1hv2sfgx90306pq1nwklbpn80lk"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
;; Tests for lowercase postcodes fail.
(invoke "pytest" "-vv" "ukpostcodeparser/test/parser.py" "-k"
(string-append "not test_091 "
"and not test_097 "
"and not test_098 "
"and not test_125 "
"and not test_131"))))))))
(native-inputs
(list python-pytest))
(home-page "https://github.com/hamstah/ukpostcodeparser")
(synopsis "UK Postcode parser for Python")
(description
"This library provides the @code{parse_uk_postcode} function for
parsing UK postcodes.")
(license license:expat)))
(define-public python-faker
(package
(name "python-faker")
(version "15.0.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "Faker" version))
(sha256
(base32
"1yx3gsivisf8ls43v0fgzy4n5q9625xrp9fr9cb5gp3h6k9cfpr4"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "python" "-m" "pytest" "-v")))))))
(native-inputs
(list python-freezegun
python-pytest
python-random2
python-ukpostcodeparser
python-validators))
(propagated-inputs (list python-dateutil))
(home-page "https://github.com/joke2k/faker")
(synopsis "Python package that generates fake data")
(description
"Faker is a Python package that generates fake data such as names,
addresses, and phone numbers.")
(license license:expat)))
(define-public python-pyaml
(package
(name "python-pyaml")
(version "21.10.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "pyaml" version))
(sha256
(base32
"10w3frzqir5sbpglc9bwb8w414dsivmcvji07yxy61mz2gp9ylf6"))))
(build-system python-build-system)
(native-inputs
(list python-unidecode))
(propagated-inputs
(list python-pyyaml))
(home-page "https://github.com/mk-fg/pretty-yaml")
(synopsis "YAML pretty-print library for Python")
(description
"pyaml is a PyYAML based python module to produce pretty and readable
YAML-serialized data.")
(license license:wtfpl2)))
(define-public python-pyyaml-env-tag
(package
(name "python-pyyaml-env-tag")
(version "0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pyyaml_env_tag" version))
(sha256
(base32 "1nsva88jsmwn0cb9jnrfiz4dvs9xakkpgfii7g1xwkx1pmsjc2bh"))))
(build-system python-build-system)
(propagated-inputs (list python-pyyaml))
(home-page "https://github.com/waylan/pyyaml-env-tag")
(synopsis "Custom YAML tag for environment variables")
(description "This package provides a custom YAML tag for referencing
environment variables in YAML files.")
(license license:expat)))
(define-public python-backpack
(package
(name "python-backpack")
(version "0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "backpack" version))
(sha256
(base32
"14rq1mvm0jda90lcx9gyyby9dvq4x3js2cmxvd6vl4686ixwyqh1"))))
(build-system python-build-system)
(native-inputs
(list python-pytest python-nose python-toml))
(propagated-inputs
(list python-simplejson))
(home-page "https://github.com/sdispater/backpack")
(synopsis "Utilities for working with Python collections")
(description "Backpack provides some useful utilities for working with
collections of data.")
(license license:expat)))
(define-public python-prompt-toolkit
(package
(name "python-prompt-toolkit")
(version "3.0.29")
(source
(origin
(method url-fetch)
(uri (pypi-uri "prompt_toolkit" version))
(sha256
(base32 "19vf5cahp3imdpwhgvk55g3dvqmc6ga175r4vkq79kffx1h0yr5x"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
;; HOME is needed for the test
;; "test_pathcompleter_can_expanduser".
(setenv "HOME" "/tmp")
(invoke "pytest" "-vv")))))))
(propagated-inputs
(list python-wcwidth))
(native-inputs
(list python-pytest))
(home-page "https://github.com/prompt-toolkit/python-prompt-toolkit")
(synopsis "Library for building command line interfaces in Python")
(description
"Prompt-Toolkit is a library for building interactive command line
interfaces in Python. It's like GNU Readline but it also features syntax
highlighting while typing, out-of-the-box multi-line input editing, advanced
code completion, incremental search, support for Chinese double-width
characters, mouse support, and auto suggestions.")
(license license:bsd-3)))
(define-public python-proselint
(package
(name "python-proselint")
(version "0.13.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "proselint" version))
(sha256
(base32
"0n1ahnq2mkgvh94g05xhc3l1fs3hh0ycskqlqivhhfdaq8ybdlkx"))))
(build-system python-build-system)
(arguments
`(#:tests? #f
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'set-home-directory
(lambda _
(setenv "HOME" "/tmp"))))))
(propagated-inputs
(list python-click python-future python-six))
(home-page "http://proselint.com/")
(synopsis "Linter for prose")
(description "@code{python-proselint} is a linter for English prose, that
scans through a file and detects issues.")
(license license:bsd-3)))
(define-public python-jedi
(package
(name "python-jedi")
(version "0.18.2")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/davidhalter/jedi")
(commit (string-append "v" version))
(recursive? #true)))
(file-name (git-file-name name version))
(sha256
(base32
"1nhsajmkn3qj32k5z3ymrd3r6dz2aliv2pqb824m5kaib986dm44"))
(modules '((guix build utils)))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(setenv "HOME" "/tmp")
(invoke "python" "-m" "pytest" "-vv")))))))
(native-inputs
(list python-colorama python-docopt python-pytest))
(propagated-inputs
(list python-parso))
(home-page "https://github.com/davidhalter/jedi")
(synopsis "Autocompletion and static analysis library for Python")
(description
"Jedi is a static analysis tool for Python that can be used in Integrated
Development Environments (@dfn{IDE}s) and text editors. It understands Python
on a deeper level than many other static analysis frameworks for Python.
Jedi understands docstrings and you can use Jedi autocompletion in your REPL
as well.")
(license license:expat)))
(define-public ptpython
(package
(name "ptpython")
(version "3.0.20")
(source (origin
(method url-fetch)
(uri (pypi-uri "ptpython" version))
(sha256
(base32
"1mjfyr5gwrs1qbizh6nki0nv6hahmg8mhhqxi1qc6pfa4znlrzga"))))
(build-system python-build-system)
(arguments
`(#:tests? #f)) ;there are no tests
(propagated-inputs
(list python-appdirs python-black python-jedi python-prompt-toolkit
python-pygments))
(home-page "https://github.com/jonathanslenders/ptpython")
(synopsis "Python Read-Eval-Print-Loop with nice IDE-like features")
(description
"ptpython is a Python read-eval-print loop with IDE-like features.
It supports syntax highlighting, multiline editing, autocompletion, mouse,
color schemes, bracketed paste, Vi and Emacs keybindings, Chinese characters
etc.")
(license license:bsd-3)))
(define-public python-easyprocess
(package
(name "python-easyprocess")
(version "0.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "EasyProcess" version))
(sha256
(base32 "115rzzr0hx4af4m6krf7dxn8851n4l8jfxahjzjc2r0zq2m8v57v"))))
(build-system python-build-system)
(arguments
;; Tests require pyvirtualdisplay, which requires this package.
`(#:tests? #f))
(home-page "https://github.com/ponty/easyprocess")
(synopsis "Python subprocess interface")
(description
"@code{easyprocess} is an easy to use Python subprocess interface.")
(license license:bsd-3)))
(define-public python-entrypoint2
(package
(name "python-entrypoint2")
(version "0.2.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "entrypoint2" version))
(sha256
(base32 "1qyxq54r2fbh09ab5sffbxajy8arbk6czxz5lq3ccr9qrypw6w27"))))
(build-system python-build-system)
(arguments
`(#:test-target "pytest"))
(native-inputs
(list python-easyprocess python-pytest python-pytest-runner))
(home-page "https://github.com/ponty/entrypoint2")
(synopsis "Command-line interface for Python modules")
(description
"@code{entrypoint2} is an easy to use command-line interface for Python
modules based on @code{argparse}. It translates function signature and
documentation to argparse configuration.")
(license license:bsd-3)))
(define-public python-pyvirtualdisplay
(package
(name "python-pyvirtualdisplay")
(version "3.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "PyVirtualDisplay" version))
(sha256
(base32 "0nb1s7nilakrkcm0vq08pz9mh8rzyhjm9jkyn1gp5sxnrv1mnx89"))))
(build-system python-build-system)
(arguments
;; Tests fail with:
;; FileNotFoundError: [Errno 2] No such file or directory: 'Xvnc'.
`(#:tests? #f))
(native-inputs
(list python-entrypoint2 python-psutil python-pytest
python-pytest-runner))
(propagated-inputs
(list python-easyprocess python-pillow))
(home-page "https://github.com/ponty/pyvirtualdisplay")
(synopsis "Python wrapper for Xvfb, Xephyr and Xvnc")
(description
"@code{pyvirtualdisplay} is a Python wrapper for Xvfb, Xephyr and Xvnc.")
(license license:bsd-3)))
(define-public python-stem
(package
(name "python-stem")
(version "1.8.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "stem" version))
(sha256
(base32
"1hk8alc0r4m669ggngdfvryndd0fbx0w62sclcmg55af4ak8xd50"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'fix-tests
;; See https://github.com/torproject/stem/issues/56
(lambda _
(substitute* "run_tests.py"
(("test\\.task\\.MOCK_VERSION,")
""))))
(replace 'check
(lambda _
(invoke "./run_tests.py" "--unit")
#t)))))
(native-inputs
(list python-mock python-pycodestyle python-pyflakes))
(home-page "https://stem.torproject.org/")
(synopsis
"Python controller library that allows applications to interact with Tor")
(description
"Stem is a Python controller library for Tor. With it you can use Tor's
control protocol to script against the Tor process and read descriptor data
relays publish about themselves.")
(license license:lgpl3)))
(define-public python-pyserial
(package
(name "python-pyserial")
(version "3.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pyserial" version))
(sha256
(base32
"1nyd4m4mnrz8scbfqn4zpq8gnbl4x42w5zz62vcgpzqd2waf0xrw"))))
(build-system python-build-system)
(arguments
'(#:tests? #f)) ; FIXME: 3/49 tests are failing.
;; #:phases
;; (modify-phases %standard-phases
;; (replace 'check
;; (lambda _
;; (zero? (system* "python" "test/run_all_tests.py" "loop://")))))))
(home-page
"https://github.com/pyserial/pyserial")
(synopsis "Python Serial Port Bindings")
(description "@code{pyserial} provide serial port bindings for Python. It
supports different byte sizes, stop bits, parity and flow control with RTS/CTS
and/or Xon/Xoff. The port is accessed in RAW mode.")
(license license:bsd-3)))
(define-public python-pyserial-asyncio
(package
(name "python-pyserial-asyncio")
(version "0.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pyserial-asyncio" version))
(sha256
(base32 "0bx3syngmq2j9mh81byzka1x4ilw8ac9mbx52zn7b7ayw0ijj0xn"))))
(build-system python-build-system)
(propagated-inputs (list python-pyserial))
(home-page "https://github.com/pyserial/pyserial-asyncio")
(synopsis "Pyserial asynchronous I/O extension")
(description "This package extends Pyserial with asynchronous I/O
support.")
(license license:bsd-3)))
(define-public python-pymemcache
(package
(name "python-pymemcache")
(version "4.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pymemcache" version))
(sha256
(base32 "157z9blr8pjg9x84jph5hm0z2l6yaq6n421jcf1hzqn1pg8rpgr7"))))
(build-system pyproject-build-system)
(arguments
;; We don't have the zstd module.
(list
#:test-flags
'(list "--ignore=pymemcache/test/test_compression.py")))
(native-inputs
(list python-faker python-pytest python-pytest-cov))
(home-page "https://github.com/pinterest/pymemcache")
(synopsis "Comprehensive, fast, pure Python memcached client")
(description
"This package provides a comprehensive, fast, pure Python memcached
client.")
(license license:asl2.0)))
(define-public python-pymodbus
(package
(name "python-pymodbus")
(version "2.5.3")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/riptideio/pymodbus")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0kjjrx7xrlx0pf3y67hhr4xvqrly3xzmvf6ic5as61m6z19m7zd5"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(add-after 'unpack 'disable-problematic-tests
(lambda _
;; The following test modules rely on Python's own
;; 'test' module, which is not distributed in the Python
;; package of Guix.
(delete-file "test/test_client_async_asyncio.py")
(delete-file "test/test_client_sync_diag.py")
;; The following test module requires the asynctest
;; library, abandoned without support for Python 3.9+
;; (see:
;; https://github.com/riptideio/pymodbus/issues/681).
(delete-file "test/test_server_asyncio.py")))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "python" "-m" "pytest")))))))
(native-inputs
(list python-mock
python-pytest
python-redis
python-sqlalchemy
python-tornado
python-twisted))
(propagated-inputs
(list python-pyserial
python-six
;; For the REPL.
python-aiohttp
python-click
python-prompt-toolkit
python-pygments
python-pyserial-asyncio))
(home-page "https://github.com/riptideio/pymodbus/")
(synopsis "Modbus protocol stack in Python")
(description "Pymodbus is a full Modbus protocol implementation using
@code{asyncio}, @code{tornado} or @code{twisted} for its asynchronous
communications core. It includes the following @emph{client} features:
@itemize
@item full read/write protocol on discrete and register
@item most of the extended protocol (diagnostic/file/pipe/setting/information)
@item TCP, UDP, Serial ASCII, Serial RTU, and Serial Binary
@item asynchronous and synchronous versions
@item payload builder/decoder utilities
@item pymodbus read eval print loop (REPL).
@end itemize
It also includes the following @emph{server} features:
@itemize
@item can function as a fully implemented Modbus server
@item TCP, UDP, Serial ASCII, Serial RTU, and Serial Binary
@item asynchronous and synchronous versions
@item full server control context (device information, counters, etc)
@item a number of backing contexts (database, redis, sqlite, a slave device).
@end itemize")
(license license:bsd-3)))
(define-public python-exodriver
(package
(name "python-exodriver")
(version "2.6.0")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/labjack/exodriver")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1ikjz8147p14s814yabdq821y691klnr2yg54zgsymcc97kvwp2q"))))
(outputs (list "out"
"doc")) ;544 KiB of examples
(build-system gnu-build-system)
(arguments
(list
#:tests? #f ;no test suite
#:make-flags #~(list (string-append "CC=" #$(cc-for-target))
(string-append "PREFIX=" #$output)
"RUN_LDCONFIG=0"
"LINK_SO=1")
#:phases
#~(modify-phases %standard-phases
(delete 'configure)
(replace 'build
(lambda* (#:key make-flags #:allow-other-keys #:rest args)
(with-directory-excursion "liblabjackusb"
(apply (assoc-ref %standard-phases 'build)
`(,@args #:make-flags ,make-flags)))))
(replace 'install
(lambda* (#:key make-flags #:allow-other-keys #:rest args)
(with-directory-excursion "liblabjackusb"
(apply (assoc-ref %standard-phases 'install)
`(,@args #:make-flags ,make-flags)))
;; Install udev rules.
(install-file "90-labjack.rules"
(string-append #$output "/lib/udev/rules.d"))
;; Install examples.
(let ((doc (string-append #$output:doc "/share/doc/" #$name)))
(mkdir-p doc)
(copy-recursively "examples"
(string-append doc "/examples"))))))))
(inputs (list libusb))
(home-page "https://github.com/labjack/exodriver")
(synopsis "USB driver for LabJack data acquisition instruments")
(description "This package provides @code{liblabjackusb}, a USB library for low-level
communication with the U3, U6, UE9, Digit, T4 and T7 LabJack data acquisition
instruments. A udev rule is also included to allow unprivileged users to
communicate with the instruments via USB.")
(license license:expat))) ;see README
(define-public python-labjack
(package
(name "python-labjack")
(version "2.0.4")
(source (origin
(method url-fetch)
(uri (pypi-uri "LabJackPython" version))
(sha256
(base32
"013bjqdi05vlbdqprr6kqi8gs4qhqc7rnyp1klw8k6fng77rpdzz"))))
(build-system python-build-system)
(arguments
(list
#:tests? #f ;no test suite
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'patch-liblabjackusb.so
(lambda* (#:key inputs #:allow-other-keys)
(substitute* (find-files "." "\\.py$")
(("ctypes.CDLL\\(\"liblabjackusb.so\"")
(format #f "ctypes.CDLL(~s"
(search-input-file inputs
"lib/liblabjackusb.so")))))))))
;; exodriver is provided as a regular input, as only its shared object is
;; used, not its Python API.
(inputs (list python-exodriver))
(home-page "https://labjack.com/support/software/examples/ud/labjackpython")
(synopsis "Python library for LabJack U3, U6, UE9 and U12")
(description "This Python library allows communicating with the U3, U6,
UE9 and U12 LabJack data acquisition (DAQ) modules.")
(license license:expat))) ;see setup.py
(define-public python-kivy-garden
(package
(name "python-kivy-garden")
(version "0.1.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "kivy-garden" version))
(sha256
(base32 "0wkcpr2zc1q5jb0bi7v2dgc0vs5h1y7j42mviyh764j2i0kz8mn2"))))
(build-system python-build-system)
(arguments
'(#:phases (modify-phases %standard-phases
(add-after 'install 'remove-bat-file
(lambda* (#:key outputs #:allow-other-keys)
(let ((out (assoc-ref outputs "out")))
(delete-file
(string-append out "/bin/garden.bat"))))))))
(propagated-inputs
(list python-requests))
(home-page "https://github.com/kivy-garden/garden")
(synopsis "Garden tool for Kivy flowers")
(description
"This package provides the @command{garden} command to install packages
for Kivy, the multitouch application platform.")
(license license:expat)))
(define-public python-kivy
(package
(name "python-kivy")
(version "2.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Kivy" version))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
"1cq4djfn7h8560mvz94dydsldg2jpp5w9rby7nafgmbh7fxg65is"))))
(build-system python-build-system)
(arguments
`(#:tests? #f ; Tests require many optional packages
#:phases
(modify-phases %standard-phases
(add-after 'patch-generated-file-shebangs 'set-sdl-paths
(lambda* (#:key inputs #:allow-other-keys)
(setenv "KIVY_SDL2_PATH"
(search-input-directory inputs "/include/SDL2"))))
(add-before 'build 'set-home
(lambda _
;; 'kivy/__init__.py' wants to create $HOME/.kivy.
(setenv "HOME" (getcwd)))))))
(native-inputs
(list pkg-config python-cython))
(inputs
(list gstreamer
mesa
(sdl-union (list sdl2 sdl2-image sdl2-mixer sdl2-ttf))
python-docutils
python-kivy-garden
python-pygments))
(home-page "https://kivy.org")
(synopsis "Multitouch application framework")
(description
"Kivy is a software library for rapid development of hardware-accelerated
multitouch applications.")
(license license:expat)))
(define-public python-kivymd
(package
(name "python-kivymd")
(version "0.104.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "kivymd" version))
(sha256
(base32 "04lwy6j0agrdwa4a6dl6qs97nx9ysmscmm8psvdzjpyj8aa1zg4p"))))
(build-system python-build-system)
(arguments
`(#:tests? #f ;tests require network
#:phases
(modify-phases %standard-phases
(add-before 'sanity-check 'set-home
(lambda _
;; 'kivy/__init__.py' wants to create $HOME/.kivy.
(setenv "HOME" (getcwd)))))))
(native-inputs (list python-docutils))
(propagated-inputs
(list python-kivy python-pillow python-pygments python-kivy-garden))
(home-page "https://github.com/kivymd/KivyMD")
(synopsis "Material Design compliant widgets for use with Kivy")
(description
"This package provides Kivy widgets that approximate Google's Material
Design spec without sacrificing ease of use or application performance.")
(license license:expat)))
(define-public python-asyncinject
(package
(name "python-asyncinject")
(version "0.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "asyncinject" version))
(sha256
(base32 "0x57idiy19lzyn32klgm06r223z8gr2aqqk91gysbshq7jg8g3pf"))))
(build-system pyproject-build-system)
(native-inputs (list python-pytest python-pytest-asyncio))
(home-page "https://github.com/simonw/asyncinject")
(synopsis
"Run async workflows using pytest-fixtures-style dependency injection")
(description
"This package lets you run asynchronous workflows using
pytest-fixtures-style dependency injection.")
(license license:asl2.0)))
(define-public python-asynckivy
(package
(name "python-asynckivy")
(version "0.5.3")
(source
(origin
(method url-fetch)
(uri
(pypi-uri "asynckivy" version))
(sha256
(base32 "0ivjvch8yn3k1ybfp7c1nm8mhc0ymg7d04mq54lly7yjvg0jvcni"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'check 'set-home
(lambda _
;; 'kivy/__init__.py' wants to create $HOME/.kivy.
(setenv "HOME" (getcwd)))))))
(propagated-inputs (list python-kivy python-asyncgui))
(home-page "https://github.com/gottadiveintopython/asynckivy")
(synopsis "Async library for Kivy")
(description
"This package provides async versions of Kivy functions to avoid the
callback-heavy mode of interaction typical in some Kivy applications.")
(license license:expat)))
(define-public python-asyncgui
(package
(name "python-asyncgui")
(version "0.5.3")
(source (origin
(method url-fetch)
(uri (pypi-uri "asyncgui" version))
(sha256
(base32
"0614130afg2qc1qq4p82piskvvx6lpjl4nlsakbjzdyd78xywnb7"))))
(build-system python-build-system)
(home-page "https://github.com/gottadiveintopython/asyncgui")
(synopsis "Enables async/await without an event loop")
(description "This package provides support for async/await applications
without requiring an event loop, useful for creative responsive GUIs.")
(license license:expat)))
(define-public python-asynctest
(package
(name "python-asynctest")
(version "0.13.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "asynctest" version))
(sha256
(base32
"1b3zsy7p84gag6q8ai2ylyrhx213qdk2h2zb6im3xn0m5n264y62"))))
(build-system python-build-system)
(arguments
;; The test suite appears to be incompatible with Python 3.9+, completes
;; with 25 failures and 41 errors out of 220 tests (see:
;; https://github.com/Martiusweb/asynctest/issues/149).
(list #:tests? #f
#:phases #~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "python" "-m" "unittest" "test")))))))
(home-page "https://github.com/Martiusweb/asynctest/")
(synopsis "Unittest extensions for testing asyncio libraries")
(description
"The @code{asynctest} Python package is built on top of the standard
@code{unittest} module and cuts down boilerplate code when testing libraries
for @code{asyncio}.")
(license license:asl2.0)))
(define-public python-binaryornot
(package
(name "python-binaryornot")
(version "0.4.4")
(source (origin
(method url-fetch)
(uri (pypi-uri "binaryornot" version))
(sha256
(base32
"0qc006986rb6bcbmiymwgcl1mns2jphr1j7sr7nk41nlr7gh359m"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch-tests
(lambda _
;; TypeError: binary() got an unexpected keyword argument
;; 'average_size'.
(substitute* "tests/test_check.py"
(("average_size=512") ""))
#t)))))
(propagated-inputs
(list python-chardet python-hypothesis))
(home-page "https://github.com/audreyr/binaryornot")
(synopsis "Package to check if a file is binary or text")
(description "Ultra-lightweight pure Python package to check if a file is
binary or text.")
(license license:bsd-3)))
(define-public binwalk
(package
(name "binwalk")
(version "2.3.4")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/ReFirmLabs/binwalk")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0cfm1khckq986l0q68kmfyfagc6zmb94hgjjm847fjcil77dnlw6"))
(modules '((guix build utils)))
(snippet
#~(begin
(for-each delete-file
(list "testing/tests/input-vectors/firmware.zip"
"testing/tests/test_firmware_zip.py"))))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'check 'set-home
(lambda _
(setenv "HOME" ""))))))
(native-inputs
(list python-coverage python-nose))
(home-page "https://github.com/ReFirmLabs/binwalk")
(synopsis "Firmware analysis tool")
(description "Binwalk is a tool for analyzing, reverse engineering, and
extracting firmware images")
(license license:expat)))
(define-public python-binwalk
(deprecated-package "python-binwalk" binwalk))
(define-public python-bson
(package
(name "python-bson")
(version "0.5.10")
(source
(origin
(method git-fetch) ;for tests
(uri (git-reference
(url "https://github.com/py-bson/bson")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"1vpy4rsvm3hhawvbg9rbw4j36ck8qylkhm8cjy0q6imvinkd2als"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "./test.py")))))))
(propagated-inputs (list python-dateutil python-six))
(home-page "https://github.com/py-bson/bson")
(synopsis "BSON (Binary JSON) codec for Python")
(description "@code{bson} is a Python library implementing a BSON (Binary
JSON) codec.")
(license license:asl2.0)))
(define-public python-nltk
(package
(name "python-nltk")
(version "3.6.2")
(source (origin
(method url-fetch)
(uri (pypi-uri "nltk" version ".zip"))
(sha256
(base32
"1sq32lwgij9h8rsksymnxxr7bqfw3vgx5ijw4azbj6k2xnmmdmap"))))
(build-system python-build-system)
(arguments
'(;; The tests require some extra resources to be downloaded.
;; TODO Try packaging these resources.
#:tests? #f))
(propagated-inputs
(list python-click python-joblib python-regex python-tqdm))
(native-inputs
(list unzip))
(home-page "http://nltk.org/")
(synopsis "Natural Language Toolkit")
(description "It provides interfaces to over 50 corpora and lexical
resources such as WordNet, along with a suite of text processing libraries
for classification, tokenization, stemming, tagging, parsing, and semantic
reasoning, wrappers for natural language processing libraries.")
(license license:asl2.0)))
(define-public python-pymongo
(package
(name "python-pymongo")
(version "4.1.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "pymongo" version))
(sha256
(base32
"1m9hc2a4kgg10xy3g5x00z4a7rrk9s0rbf5qfypwnhq0kdfg5f6p"))))
(build-system python-build-system)
(propagated-inputs
(list python-certifi))
(home-page "https://github.com/mongodb/mongo-python-driver")
(synopsis "Python driver for MongoDB")
(description "Python driver for MongoDB.")
(license license:asl2.0)))
(define-public python-consul
(package
(name "python-consul")
(version "0.6.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "python-consul" version))
(sha256
(base32
"0rfyxcy4cr3x848vhx876ifalxd5ghq6l5x813m49h4vq2d4jiq8"))))
(build-system python-build-system)
(arguments
'(#:tests? #f)) ; The tests are not distributed
(propagated-inputs
(list python-requests python-six))
(home-page "https://github.com/cablehead/python-consul")
(synopsis "Python client for Consul")
(description
"Python client for @url{http://www.consul.io/,Consul}, a tool for service
discovery, monitoring and configuration.")
(license license:expat)))
(define-public python-schematics
(package
(name "python-schematics")
(version "1.1.1")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/schematics/schematics")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0xdqskycznqc7mfp60bhw1zq8wx7yx1dvmbq3brnm1dx3xnqa0zd"))))
(build-system python-build-system)
(propagated-inputs
(list python-six))
(arguments
;; The tests require a bunch of not very nice packages with fixed
;; version requirements (e.g. python-coveralls).
`(#:tests? #f))
(home-page "https://github.com/schematics/schematics")
(synopsis "Python Data Structures for Humans")
(description "Python Data Structures for Humans.")
(license license:bsd-3)))
(define-public python-odfpy
(package
(name "python-odfpy")
(version "1.4.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "odfpy" version))
(sha256
(base32
"1v1qqk9p12qla85yscq2g413l3qasn6yr4ncyc934465b5p6lxnv"))))
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "pytest" "-vv"))))))
(build-system python-build-system)
(native-inputs
(list python-pytest))
(propagated-inputs
(list python-defusedxml))
(home-page "https://github.com/eea/odfpy")
(synopsis "Python API and tools to manipulate OpenDocument files")
(description "Collection of libraries and utility programs written in
Python to manipulate OpenDocument 1.2 files.")
(license
;; The software is mainly dual GPL2+ and ASL2.0, but includes a
;; number of files with other licenses.
(list license:gpl2+ license:asl2.0 license:lgpl2.1+ license:cc-by-sa3.0))))
(define-public python-namex
(package
(name "python-namex")
(version "0.0.7")
(source
(origin
(method url-fetch)
(uri (pypi-uri "namex" version))
(sha256
(base32 "16ynrq245c3nywv476izrc4bcacm9gxjzgr67ng91g929ny6bfl4"))))
(build-system pyproject-build-system)
(arguments (list #:tests? #false)) ;there are none
(home-page "https://github.com/fchollet/namex")
(synopsis
"Separate implementation and public API surface of Python packages")
(description
"This package provides a simple utility to separate the
implementation of your Python package and its public API surface.")
(license license:asl2.0)))
(define-public python-natsort
(package
(name "python-natsort")
(version "7.1.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "natsort" version))
(sha256
(base32
"00y49bfsi7rrsd1s42gc2w95a6arl9ipdsx2493hr0v54fj07ih0"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'remove-test-hypothesis-deadlines
(lambda _
(substitute* "tests/test_utils.py"
(("from hypothesis import given")
"from hypothesis import given, settings")
(("( +)@given" all spaces)
(string-append spaces "@settings(deadline=None)\n" all)))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-v")))))))
(native-inputs
(list glibc-utf8-locales ;; Tests want en_US.UTF-8
python-hypothesis
python-pytest-cov
python-pytest-mock
python-pytest))
(propagated-inputs ; TODO: Add python-fastnumbers.
(list python-pyicu))
(home-page "https://github.com/SethMMorton/natsort")
(synopsis "Natural sorting for python and shell")
(description
"Natsort lets you apply natural sorting on lists instead of
lexicographical. If you use the built-in @code{sorted} method in python on a
list such as @code{[@code{a20}, @code{a9}, @code{a1}, @code{a4}, @code{a10}]},
it would be returned as @code{[@code{a1}, @code{a10}, @code{a20}, @code{a4},
@code{a9}]}. Natsort provides a function @code{natsorted} that identifies
numbers and sorts them separately from strings. It can also sort version
numbers, real numbers, mixed types and more, and comes with a shell command
@command{natsort} that exposes this functionality in the command line.")
(license license:expat)))
(define-public glances
(package
(name "glances")
(version "4.1.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "glances" version))
(sha256
(base32 "10yjwbmwv2x4x1n3hr1631m8l6l9w8fa7rnvfz1vmzkjs199ihib"))
(modules '((guix build utils)))
(snippet
'(begin
;; Glances phones PyPI for weekly update checks by default.
;; Disable these. The user can re-enable them if desired.
(substitute* "glances/outdated.py"
(("^(.*)self\\.load_config\\(config\\)\n" line indentation)
(string-append indentation
"self.args.disable_check_update = True\n"
line)))
#t))))
(build-system python-build-system)
(propagated-inputs
(list python-defusedxml python-orjson python-packaging python-psutil))
(home-page "https://github.com/nicolargo/glances")
(synopsis "Cross-platform curses-based monitoring tool")
(description
"Glances is a curses-based monitoring tool for a wide variety of platforms.
Glances uses the PsUtil library to get information from your system. It
monitors CPU, load, memory, network bandwidth, disk I/O, disk use, and more.")
(license license:lgpl3+)))
(define-public python-graphql-core
(package
(name "python-graphql-core")
(version "3.1.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "graphql-core" version))
(sha256
(base32
"0fjv5w2wvgdr8gb27v241bavliipyir9fdz48rsgc3xapm644mn0"))))
(build-system python-build-system)
(arguments
`(#:tests? #f ; Tests require the unpackaged pytest-benchmark.
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch-hardcoded-version
(lambda _ (substitute*
"setup.py"
(("'gevent==1.1rc1'") "'gevent'"))
#t)))))
(native-inputs
(list python-gevent python-mock python-pytest-mock))
(propagated-inputs
(list python-promise python-six))
(home-page "https://github.com/graphql-python/graphql-core")
(synopsis "GraphQL implementation for Python")
(description
"GraphQL implementation for Python. GraphQL is a data query language and
runtime designed and used to request and deliver data to mobile and web apps.
This library is a port of @url{https://github.com/graphql/graphql-js,graphql-js}
to Python.")
(license license:expat)))
(define-public python-graphql-relay
(package
(name "python-graphql-relay")
(version "3.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "graphql-relay" version))
(sha256
(base32
"1d70vwam9gjhx7fqzsa03x7lc6ivcqki5r9pk8m7rslmb7pagmbh"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "tests")))))))
(native-inputs
(list
python-pytest
python-pytest-asyncio))
(propagated-inputs
(list python-graphql-core))
(home-page "https://github.com/graphql-python/graphql-relay-py")
(synopsis "Relay implementation for Python")
(description
"This is a library to allow the easy creation of Relay-compliant servers
using the GraphQL Python reference implementation of a GraphQL server. It
should be noted that the code is a exact port of the original
@url{https://github.com/graphql/graphql-relay-js,graphql-relay js implementation}
from Facebook.")
(license license:expat)))
(define-public python-graphene
(package
(name "python-graphene")
(version "3.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "graphene" version))
(sha256
(base32
"08m1n2ydk48c18cvl8474v3pwwacjl1vgq61m9qs00122mp0cj5g"))))
(build-system python-build-system)
(propagated-inputs
(list python-graphql-core python-graphql-relay python-aniso8601
python-promise python-six))
(arguments
`(#:tests? #f)) ; no tests/ in the PyPI tarball
(home-page "https://graphene-python.org/")
(synopsis "GraphQL Framework for Python")
(description
"Graphene is a Python library for building GraphQL schemas/types.
A GraphQL schema describes your data model, and provides a GraphQL server
with an associated set of resolve methods that know how to fetch data.")
(license license:expat)))
(define-public python-random2
(package
(name "python-random2")
(version "1.0.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "random2" version ".zip"))
(sha256
(base32
"01y0s4747plsx8fdnxy0nz83dp69naddz58m81r9h0s1qfm31b9l"))
(patches
(search-patches "python-random2-getrandbits-test.patch"))))
(build-system python-build-system)
(native-inputs (list unzip))
(home-page "https://pypi.python.org/pypi/random2")
(synopsis "Python 3 version of the Python 2 @code{random} module")
(description
"This package provides a Python 3 ported version of Python 2.7’s
@code{random} module. It has also been back-ported to work in Python 2.6.
In Python 3, the implementation of @code{randrange()} was changed, so that
even with the same seed you get different sequences in Python 2 and 3.
This package closes that gap, allowing stable random number generation
between the different Python versions.")
(license license:psfl)))
(define-public python-snowballstemmer
(package
(name "python-snowballstemmer")
(version "2.0.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "snowballstemmer" version))
(sha256
(base32
"0ligk61idlz8kkgd5hpip5whm172riwglb6xydii7h62yhysqfyz"))))
(build-system python-build-system)
(arguments
`(;; No tests exist
#:tests? #f))
(home-page "https://github.com/shibukawa/snowball_py")
(synopsis "Snowball stemming library collection for Python")
(description "This package provides 16 word stemmer algorithms generated
from Snowball algorithms. It includes the 15 original ones plus the Poerter
English stemmer.")
(license license:bsd-3)))
(define-public python-setproctitle
(package
(name "python-setproctitle")
(version "1.3.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "setproctitle" version))
(sha256
(base32
"1zbp6kyzfbrmbh9j3idai0mnpa28zn5db3k5l07jc3c3gj89gyxr"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(setenv "PYTHON" (or (which "python3") (which "python")))
(setenv "PYCONFIG" (if (which "python3-config")
"python3-config --embed"
"python-config"))
(substitute* "tests/conftest.py"
(("cc") "gcc"))
(when tests?
(invoke "pytest" "tests/")))))))
(native-inputs
(list procps python-pytest)) ; required for tests
(home-page "https://github.com/dvarrazzo/py-setproctitle")
(synopsis
"Setproctitle implementation for Python to customize the process title")
(description "The library allows a process to change its title (as displayed
by system tools such as @code{ps} and @code{top}).
Changing the title is mostly useful in multi-process systems, for example when a
master process is forked: changing the children's title allows identifying the
task each process is busy with. The technique is used by PostgreSQL and the
OpenSSH Server for example.")
(license license:bsd-3)))
(define-public python-pyelftools
(package
(name "python-pyelftools")
(version "0.30")
(home-page "https://github.com/eliben/pyelftools")
(source
(origin
(method git-fetch)
(uri (git-reference (url home-page)
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0gk47mq5cqv6qz35aydn67wma5m70gv5f9f6pg38zny6vsfavmq3"))
(snippet
;; Delete bundled readelf executable.
'(delete-file "test/external_tools/readelf"))))
(build-system python-build-system)
(arguments
'(#:phases (modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
;; Taken from tox.ini.
(invoke "python" "test/run_all_unittests.py")
(invoke "python" "test/run_examples_test.py")
(invoke "python" "test/run_readelf_tests.py")))))))
(synopsis
"Analyze binary and library file information")
(description "This Python library provides interfaces for parsing and
analyzing two binary and library file formats ; the Executable and Linking
Format (ELF), and debugging information in the Debugging With Attributed
Record Format (DWARF).")
(license license:public-domain)))
(define-public python-pefile
(package
(name "python-pefile")
(version "2022.5.30")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/erocarrera/pefile")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1qj90a0s2gd5hn2zggypqc1077inid5dcl1fp5973b04kf2b9z8a"))))
(build-system python-build-system)
(propagated-inputs (list python-future))
(home-page "https://github.com/erocarrera/pefile")
(synopsis "Portable Executable (PE) file parser")
(description "This python library provides interfaces for parsing and
working with Portable Executable (PE) files. It makes to most information
from the header, as well as section details and data available.")
(license license:expat)))
(define-public python-imagesize
(package
(name "python-imagesize")
(version "1.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "imagesize" version))
(sha256
(base32
"1cd24x0vqbd6c8ym1n21qc0aj54mfb7rzdqglmwk9xxixajbbxmi"))))
(build-system python-build-system)
(home-page "https://github.com/shibukawa/imagesize_py")
(synopsis "Gets image size of files in various formats in Python")
(description
"This package allows determination of image size from
PNG, JPEG, JPEG2000 and GIF files in pure Python.")
(license license:expat)))
(define-public python-termstyle
(package
(name "python-termstyle")
(version "0.1.11")
(source
(origin
(method url-fetch)
(uri (pypi-uri "termstyle" version))
(sha256
(base32
"17wzkkcqy5zc0g68xlad3kcv66iw14d2pwqc0h9420gak0vbhx7g"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "python" "test3.py"))))))
(home-page "https://github.com/gfxmonk/termstyle")
(synopsis "Console text coloring for Python")
(description "This package provides console text coloring for Python.")
(license license:bsd-3)))
(define-public python-argcomplete
(package
(name "python-argcomplete")
(version "1.11.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "argcomplete" version))
(sha256
(base32
"0h1przxffrhqvi46k40pzjsvdrq4zc3sl1pc96kkigqppq0vdrss"))
(patches (search-patches "python-argcomplete-1.11.1-fish31.patch"))))
(build-system python-build-system)
(native-inputs
(list python-coverage
python-flake8
python-pexpect
python-wheel
tcsh
fish
bash)) ;full Bash for 'test_file_completion'
(home-page "https://github.com/kislyuk/argcomplete")
(synopsis "Shell tab completion for Python argparse")
(description "argcomplete provides extensible command line tab completion
of arguments and options for Python scripts using @code{argparse}. It's
particularly useful for programs with many options or sub-parsers that can
dynamically suggest completions ; for example, when browsing resources over the
network.")
(license license:asl2.0)))
(define-public python-csscompressor
(package
(name "python-csscompressor")
(version "0.9.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "csscompressor" version))
(sha256
(base32
"018ssffvlpnc1salmnpyl52c11glzzwj4k9f757hl4pkpjnjp8mg"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "py.test"))))))
(native-inputs
(list python-pytest))
(home-page "https://github.com/sprymix/csscompressor")
(synopsis "Python port of YUI CSS Compressor")
(description
"This package provides a python port of YUI CSS Compressor.")
(license license:bsd-3)))
(define-public python-rcssmin
(package
(name "python-rcssmin")
(version "1.0.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "rcssmin" version))
(sha256
(base32
"0w42l4dhxghcz7pj3q7hkxp015mvb8z2cq9sfxbl31npsfavd1ya"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "python" "run_tests.py" "tests"))))))
(home-page "http://opensource.perlig.de/rcssmin/")
(synopsis "CSS Minifier")
(description "The minifier is based on the semantics of the YUI compressor,
which itself is based on the rule list by Isaac Schlueter.")
(license license:asl2.0)))
(define-public python-rjsmin
(package
(name "python-rjsmin")
(version "1.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "rjsmin" version))
(sha256
(base32
"0cmc72rlkvzz8fl89bc83czkx0pcvhzj7yn7m29r8pgnf5fcfpdi"))
(modules '((guix build utils)))
(snippet
'(begin
(for-each delete-file (find-files "bench" "\\.js$"))
#t))))
(build-system python-build-system)
(arguments
'(#:tests? #f ; Not all test files included.
#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key inputs outputs tests? #:allow-other-keys)
(add-installed-pythonpath inputs outputs)
(if tests?
(invoke "py.test" "-vv" "tests")
#t))))))
(native-inputs
(list python-pytest))
(home-page "http://opensource.perlig.de/rjsmin/")
(synopsis "Javascript Minifier")
(description "@code{rJSmin} is a javascript minifier written in Python. The
minifier is based on the semantics of jsmin.c by Douglas Crockford. The module
is a re-implementation aiming for speed, so it can be used at runtime (rather
than during a preprocessing step).")
(license license:asl2.0)))
(define-public python-xopen
(package
(name "python-xopen")
(version "1.7.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "xopen" version))
(sha256
(base32
"17qda88irg77qdm2kkxq4zgdhwfgykcpdgd4cx3xfpp9k219q7wh"))))
(build-system pyproject-build-system)
(propagated-inputs
(list pigz python-isal python-typing-extensions))
(native-inputs
(list python-pytest python-pytest-timeout python-setuptools-scm))
(home-page "https://github.com/marcelm/xopen/")
(synopsis "Open compressed files transparently")
(description "This module provides an @code{xopen} function that works
like Python's built-in @code{open} function, but can also deal with compressed
files. Supported compression formats are gzip, bzip2 and, xz, and are
automatically recognized by their file extensions. The focus is on being as
efficient as possible on all supported Python versions.")
(license license:expat)))
(define-public python-cheetah
(package
(name "python-cheetah")
(version "3.3.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "CT3" version))
(sha256
(base32
"1j36vampqip18jx0jzngb9rnkhhhl8hqnscg117y0d6cgrgm57qw"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(add-after 'unpack 'use-absolute-python
(lambda _
(substitute* "Cheetah/CheetahWrapper.py"
(("#!/usr/bin/env python")
(string-append "#!" (which "python"))))))
(add-after 'unpack 'fix-tests
(lambda _
(substitute* "Cheetah/Tests/ImportHooks.py"
(("os.path.dirname\\(__file__\\)")
(string-append "'" (getcwd) "/Cheetah/Tests'")))))
(replace 'check
(lambda _
(setenv "TMPDIR" "/tmp")
(substitute* "Cheetah/Tests/Test.py"
(("unittest.TextTestRunner\\(\\)")
"unittest.TextTestRunner(verbosity=2)"))
(invoke "python" "Cheetah/Tests/Test.py"))))))
(propagated-inputs
(list python-markdown)) ;optional
(home-page "https://cheetahtemplate.org/")
(synopsis "Template engine")
(description "Cheetah is a text-based template engine and Python code
generator.
Cheetah can be used as a standalone templating utility or referenced as
a library from other Python applications. It has many potential uses,
but web developers looking for a viable alternative to ASP, JSP, PHP and
PSP are expected to be its principle user group.
Features:
@enumerate
@item Generates HTML, SGML, XML, SQL, Postscript, form email, LaTeX, or any other
text-based format.
@item Cleanly separates content, graphic design, and program code.
@item Blends the power and flexibility of Python with a simple template language
that non-programmers can understand.
@item Gives template writers full access to any Python data structure, module,
function, object, or method in their templates.
@item Makes code reuse easy by providing an object-orientated interface to
templates that is accessible from Python code or other Cheetah templates.
One template can subclass another and selectively reimplement sections of it.
@item Provides a simple, yet powerful, caching mechanism that can dramatically
improve the performance of a dynamic website.
@item Compiles templates into optimized, yet readable, Python code.
@end enumerate")
(license (license:x11-style "file://LICENSE"))))
(define-public python-chevron
(package
(name "python-chevron")
(version "0.14.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "chevron" version))
(sha256
(base32
"1gqfh00ics2k1sm5g46l3bi8cl5fc5d1cwzh1ylvcxvdvypklqc7"))))
(build-system pyproject-build-system)
(arguments (list #:tests? #false)) ;there are none
(home-page "https://github.com/noahmorrison/chevron")
(synopsis "Mustache templating language renderer")
(description "This package provides a Python implementation of the
Mustache templating language renderer.")
(license license:expat)))
;; XXX: Try to inherit from duckdb and build from source with all extentions.
(define-public python-duckdb
(package
(name "python-duckdb")
(version "1.0.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "duckdb" version))
(sha256
(base32
"0lyl6di1c7j31i2mk384j711kzyyf9rjd3nqx5mbgmf7gfvmk852"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
#~(list "--ignore=tests/slow/test_h2oai_arrow.py"
;; Do not relay on mypy.
"--ignore=tests/stubs/test_stubs.py"
"-k" (string-append
;; Don't install anything, thank you.
"not test_install_non_existent_extension"
;; See <https://github.com/duckdb/duckdb/issues/11961>.
" and not test_fetchmany"
;; See <https://github.com/duckdb/duckdb/issues/10702>.
" and not test_connection_interrupt"
" and not test_query_interruption"))
#:phases
#~(modify-phases %standard-phases
;; Tests need this
(add-before 'check 'set-HOME
(lambda _ (setenv "HOME" "/tmp")))
(add-before 'build 'set-version
(lambda _
(setenv "SETUPTOOLS_SCM_PRETEND_VERSION" #$version)
(substitute* "setup.py"
(("\"setuptools_scm<7.0.0\",") ""))))
;; Later versions of pybind replace "_" with "const_name".
(add-after 'unpack 'pybind-compatibility
(lambda _
(with-directory-excursion "src/include/duckdb_python"
(substitute* '("python_objects.hpp"
"pyfilesystem.hpp"
"pybind11/conversions/pyconnection_default.hpp")
(("const_name") "_"))))))))
(propagated-inputs
(list python-adbc-driver-manager))
(native-inputs
(list pybind11
python-fsspec
python-google-cloud-storage
python-numpy
python-pandas
python-psutil
python-pyarrow
python-pytest
python-pytest-runner
python-setuptools-scm))
(home-page "https://www.duckdb.org")
(synopsis "DuckDB embedded database")
(description "DuckDB is an in-process SQL OLAP database management
system.")
(license license:expat)))
(define-public python-dulwich
(package
(name "python-dulwich")
(version "0.20.30")
(source
(origin
(method url-fetch)
(uri (list (string-append "https://www.dulwich.io/releases/"
"dulwich-" version ".tar.gz")
(pypi-uri "dulwich" version)))
(sha256
(base32
"0hafaff30bmkj30b8pwpwsy3fz5h6c1pn98ihqcvl5zndflr1h22"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(add-before 'check 'fix-tests
(lambda* (#:key inputs #:allow-other-keys)
(substitute* '("dulwich/tests/test_repository.py"
"dulwich/tests/test_porcelain.py"
"dulwich/tests/test_hooks.py")
(("/bin/sh") (search-input-file inputs "/bin/sh")))
(setenv "TEST_RUNNER" "unittest")
(setenv "PYTHONHASHSEED" "random"))))))
(propagated-inputs
(list python-fastimport python-urllib3))
(native-inputs
(list python-mock python-geventhttpclient python-gpg
git gnupg))
(home-page "https://www.dulwich.io/")
(synopsis "Git implementation in Python")
(description "Dulwich is an implementation of the Git file formats and
protocols written in pure Python.")
;; Can be used with either license.
(license (list license:asl2.0 license:gpl2+))))
(define-public python-dunamai
(package
(name "python-dunamai")
(version "1.21.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "dunamai" version))
(sha256
(base32 "1i35i8ym6n8mpgrq31hivrvfciy12gv26jwlzimmkx9jy2spz0h5"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
#~(list "-k" "not test__version__from_git__shallow")
#:phases
#~(modify-phases %standard-phases
;; These steps are taked from NixOS package definition:
;; nixpkgs/pkgs/development/python-modules/dunamai/default.nix
(add-before 'check 'pre-check
(lambda _
(setenv "PATH" (string-append #$output "/bin:" (getenv "PATH")))
(setenv "HOME" "/tmp")
(invoke "git" "config" "--global" "user.email" "nobody@example.com")
(invoke "git" "config" "--global" "user.name" "Nobody"))))))
(propagated-inputs
(list python-packaging))
(native-inputs
(list git-minimal
python-poetry-core
python-pytest))
(home-page "https://github.com/mtkennerly/dunamai")
(synopsis "Dynamic version generation")
(description
"Dunamai is Python library and command line tool for producing dynamic,
standards-compliant version strings, derived from tags in your version control
system. This facilitates uniquely identifying nightly or per-commit builds in
continuous integration and releasing new versions of your software simply by
creating a tag.")
(license license:expat)))
(define-public python-pbkdf2
(package
(name "python-pbkdf2")
(version "1.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pbkdf2" version))
(sha256
(base32
"0yb99rl2mbsaamj571s1mf6vgniqh23v98k4632150hjkwv9fqxc"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "python" "test/test_pbkdf2.py"))))))
(home-page "https://www.dlitz.net/software/python-pbkdf2/")
(synopsis "Password-based key derivation")
(description "This module implements the password-based key derivation
function, PBKDF2, specified in RSA PKCS#5 v2.0.
PKCS#5 v2.0 Password-Based Key Derivation is a key derivation function which
is part of the RSA Public Key Cryptography Standards series. The provided
implementation takes a password or a passphrase and a salt value (and
optionally a iteration count, a digest module, and a MAC module) and provides
a file-like object from which an arbitrarily-sized key can be read.")
(license license:expat)))
(define-public python-qrcode
(package
(name "python-qrcode")
(version "7.3.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "qrcode" version))
(sha256
(base32 "0y35jlwfvkgn9341lzshyaqgpp61vysjh107vhdd96ya83r6ynip"))))
(build-system python-build-system)
(arguments
;; FIXME: Tests require packaging 'pymaging'.
'(#:tests? #f))
(propagated-inputs
(list python-lxml ; for SVG output
python-pillow)) ; for PNG output
(home-page "https://github.com/lincolnloop/python-qrcode")
(synopsis "QR Code image generator")
(description "This package provides a pure Python QR Code generator
module. It uses the Python Imaging Library (PIL) to allow for the generation
of QR Codes.
In addition this package provides a command line tool to generate QR codes and
either write these QR codes to a file or do the output as ascii art at the
console.")
(license license:bsd-3)))
(define-public python-rst2ansi
(package
(name "python-rst2ansi")
(version "0.1.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "rst2ansi" version))
(sha256
(base32
"0vzy6gd60l79ff750scl0sz48r1laalkl6md6dwzah4dcadgn5qv"))))
(build-system python-build-system)
(propagated-inputs
(list python-docutils))
(home-page "https://github.com/Snaipe/python-rst-to-ansi")
(synopsis "Convert RST to ANSI-decorated console output")
(description
"Python module dedicated to rendering RST (reStructuredText) documents
to ansi-escaped strings suitable for display in a terminal.")
(license license:expat)))
(define-public python-ansi2html
(package
(name "python-ansi2html")
(version "1.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ansi2html" version))
(sha256
(base32
"1wa00zffprb78w1mqq90dk47czz1knanys2a40zbw2vyapd5lp9y"))))
(build-system python-build-system)
(native-inputs
(list python-mock python-nose))
(propagated-inputs
(list python-six))
(home-page "https://github.com/ralphbean/ansi2html")
(synopsis "Convert ANSI-decorated console output to HTML")
(description
"@command{ansi2html} is a Python library and command line utility for
converting text with ANSI color codes to HTML or LaTeX.")
(license license:gpl3+)))
(define-public python-easy-ansi
(package
(name "python-easy-ansi")
(version "0.3")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://gitlab.com/joeysbytes/easy-ansi")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0albh55ynzs98qy9pln4qaxw5qhhh3lk09jy9bx19gycrp1c3lc3"))))
(build-system python-build-system)
(home-page "https://gitlab.com/joeysbytes/easy-ansi")
(synopsis "Terminal framework API")
(description
"Easy ANSI is a terminal framework API to give you an easy way to use
colors, cursor control movements, and line/box drawing. It is not meant as a
replacement to more full-featured frameworks (such as curses or urwid), but as
a tool to quickly create nice-looking screens in your terminal window. You
can even create animations with the cursor controls.")
(license license:expat)))
(define-public python-ddt
(package
(name "python-ddt")
(version "1.4.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ddt" version))
(sha256
(base32
"0y2k756qjz1rhpivi60hy29b4bf0bh3wck39i1mn6pkil9k779k4"))))
(build-system python-build-system)
(native-inputs
(list python-pytest))
(propagated-inputs
(list python-pyyaml))
(home-page "https://github.com/datadriventests/ddt")
(synopsis "Data-Driven Tests")
(description
"Data-Driven Tests (@dfn{DDT}) allow you to multiply one test case by
running it with different test data, and make it appear as multiple test
cases.")
(license license:expat)))
(define-public python-pycountry
(package
(name "python-pycountry")
(version "22.3.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pycountry" version))
(sha256
(base32
"0ihnkh86zz01vi46gcwgq6h71jrpj7hq71zi13c98n2qdhj3l5mj"))))
(build-system python-build-system)
(home-page "https://bitbucket.org/flyingcircus/pycountry")
(synopsis "ISO databases for languages, countries, currencies, etc.")
(description
"@code{pycountry} provides the ISO databases for the standards:
@enumerate
@item 639-3 (Languages)
@item 3166 (Countries)
@item 3166-3 (Deleted Countries)
@item 3166-2 (Subdivisions of countries)
@item 4217 (Currencies)
@item 15924 (Scripts)
@end enumerate
It includes a copy from Debian’s pkg-isocodes and makes the data accessible
through a Python API.")
(license license:lgpl2.1+)))
(define-public python-pycountry@20.7.3
(package
(inherit python-pycountry)
(name "python-pycountry")
(version "20.7.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pycountry" version))
(sha256
(base32 "0hnbabsmqimx5hqh0jbd2f64i8fhzhhbrvid57048hs5sd9ll241"))))))
(define-public python-pycosat
(package
(name "python-pycosat")
(version "0.6.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pycosat" version ".zip"))
(sha256
(base32
"1vg0f2fwcybpdqv92z0hwdl603n2safh3fqvjjxkksd78r4qg6ac"))))
;; TODO: Unundle picosat. http://fmv.jku.at/picosat/
(build-system python-build-system)
(native-inputs
(list unzip))
(home-page "https://github.com/ContinuumIO/pycosat")
(synopsis "Bindings to picosat (a SAT solver)")
(description
"This package provides efficient Python bindings to @code{picosat} on
the C level. When importing pycosat, the @code{picosat} solver becomes part
of the Python process itself. @code{picosat} is a @dfn{Boolean Satisfiability
Problem} (SAT) solver.")
(license license:expat)))
(define-public python-pypeg2
(package
(name "python-pypeg2")
(version "2.15.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pyPEG2" version))
(sha256
(base32
"0v8ziaam2r637v94ra4dbjw6jzxz99gs5x4i585kgag1v204yb9b"))))
(build-system python-build-system)
(propagated-inputs (list python-lxml))
(arguments
;;https://bitbucket.org/fdik/pypeg/issues/36/test-failures-on-py35
'(#:tests? #f))
(home-page "https://fdik.org/pyPEG/")
(synopsis "Parsing Expression Grammars in Python")
(description "PyPEG is an intrinsic parser interpreter framework for
Python. It is based on Parsing Expression Grammars, PEG. With pyPEG you can
parse many formal languages.")
(license license:gpl2)))
(define-public python-incremental
(package
(name "python-incremental")
(version "22.10.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "incremental" version))
(sha256
(base32
"1l0b9k158n04cmcccdq9phdy20h08lpis922dy71iq7pw2sywbwi"))))
(build-system python-build-system)
(home-page "https://github.com/hawkowl/incremental")
(synopsis "Library for versioning Python projects")
(description "Incremental is a small library that versions your Python
projects.")
(license license:expat)))
(define-public python-invoke
(package
(name "python-invoke")
(home-page "https://www.pyinvoke.org/")
(version "1.6.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "invoke" version))
(sha256
(base32
"1lsql9daabfr31c7syva5myc5bka45k57ygs9fliv63qrwp1wk9p"))))
(build-system python-build-system)
(arguments
;; XXX: Requires many dependencies that are not yet in Guix.
`(#:tests? #f
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'delete-python2-code
(lambda _
(delete-file-recursively "invoke/vendor/yaml2")))
(add-after 'unpack 'fix-bash-path
(lambda* (#:key inputs #:allow-other-keys)
(let ((bash (assoc-ref inputs "bash")))
(substitute* "invoke/config.py"
(("shell = \"/bin/bash\"")
(string-append "shell = \"" bash "/bin/bash\"")))))))))
(inputs
`(("bash" ,bash-minimal)))
(synopsis "Pythonic task execution")
(description
"Invoke is a Python task execution tool and library, drawing inspiration
from various sources to arrive at a powerful and clean feature set. It is
evolved from the Fabric project, but focuses on local and abstract concerns
instead of servers and network commands.")
(license license:bsd-3)))
(define-public python-automat
(package
(name "python-automat")
(version "20.2.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "Automat" version))
(sha256
(base32
"0cyzrcqiibwdsp4y0djkllnzab8m5faa4s0d1kpi23k1fhy80ybr"))))
(build-system python-build-system)
;; We disable the tests because they require python-twisted, while
;; python-twisted depends on python-automat. Twisted is optional, but the
;; tests fail if it is not available. Also see
;; <https://github.com/glyph/automat/issues/71>.
(arguments
`(#:tests? #f
#:phases
(modify-phases %standard-phases
;; Remove script, because it depends on python-twisted.
(add-after 'unpack 'remove-entrypoint
(lambda _
(substitute* "setup.py"
(("\"automat-visualize = automat._visualize:tool\"") "")))))))
(native-inputs
(list python-m2r python-setuptools-scm python-graphviz))
(propagated-inputs
(list python-six python-attrs))
(home-page "https://github.com/glyph/Automat")
(synopsis "Self-service finite-state machines")
(description "Automat is a library for concise, idiomatic Python
expression of finite-state automata (particularly deterministic finite-state
transducers).")
(license license:expat)))
(define-public python-m2r
(package
(name "python-m2r")
(version "0.3.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "m2r" version))
(sha256
(base32
"1asnwazfznbs0r7x03pj5ns4npz18z3kli538sgdicfg97y6gyxa"))
(modules '((guix build utils)))
(snippet
;; Adjust test regex for Python 3.10 compatibility.
;; Taken from upstream pull request:
;; https://github.com/miyakogi/m2r/pull/62
'(substitute* "tests/test_cli.py"
(("self.assertIn\\('optional arguments:', message\\)")
"self.assertRegex(message, r'option(s|al arguments):')")))))
(build-system python-build-system)
(propagated-inputs
(list python-docutils python-mistune))
(native-inputs
(list python-pygments python-mock))
(home-page "https://github.com/miyakogi/m2r")
(synopsis "Markdown to reStructuredText converter")
(description "M2R converts a markdown file including reST markups to valid
reST format.")
(license license:expat)))
(define-public python-constantly
(package
(name "python-constantly")
(version "15.1.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "constantly" version))
(sha256
(base32
"0dgwdla5kfpqz83hfril716inm41hgn9skxskvi77605jbmp4qsq"))))
(build-system python-build-system)
(home-page "https://github.com/twisted/constantly")
(synopsis "Symbolic constants in Python")
(description "Constantly is a Python library that provides symbolic
constant support. It includes collections and constants with text, numeric,
and bit flag values.")
(license license:expat)))
(define-public python-attrdict3
(package
(name "python-attrdict3")
(version "2.0.2")
(source (origin
(method url-fetch)
(uri (pypi-uri "attrdict3" version))
(sha256
(base32
"1s2z6c9jam5azm746l49wsqsyi29zbbrknq1axsw230jl4f1fk00"))))
(build-system python-build-system)
;; The package is no longer maintained and tests need some work.
(arguments '(#:tests? #f))
(propagated-inputs (list python-six))
(home-page "https://github.com/pirofti/AttrDict3")
(synopsis "Attribute-style access dictionaries")
(description
"This package provides mapping objects whose elements can be accessed
both as keys and as attributes.")
(license license:expat)))
(define-public python-attrs
(package
(name "python-attrs")
(version "21.2.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "attrs" version))
(sha256
(base32
"1yzmwi5d197p0qhl7rl4xi9q1w8mk9i3zn6hrl22knbcrb1slspg"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(add-after 'unpack 'remove-test-hypothesis-deadlines
(lambda _
(substitute* "tests/test_make.py"
(("assume, given") "assume, given, settings")
(("( +)@given" all spaces)
(string-append spaces "@settings(deadline=None)\n" all)))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest")))))))
(native-inputs
(list python-coverage python-hypothesis python-pympler python-pytest
python-six))
(home-page "https://github.com/python-attrs/attrs/")
(synopsis "Attributes without boilerplate")
(description "@code{attrs} is a Python package with class decorators that
ease the chores of implementing the most common attribute-related object
protocols.")
(license license:expat)))
(define-public python-attrs-bootstrap
(package
(inherit python-attrs)
(name "python-attrs-bootstrap")
(native-inputs `())
(arguments `(#:tests? #f))))
(define-public python-cliapp
(package
(name "python-cliapp")
(version "1.20180812.1")
(source
(origin
(method url-fetch)
(uri (string-append
"http://git.liw.fi/cgi-bin/cgit/cgit.cgi/cliapp/snapshot/cliapp-"
version ".tar.gz"))
(sha256
(base32
"1c1jlblbns8qhiaqjpg4xi6lip8xwfc5w643p43rg543havaj45x"))))
(build-system python-build-system)
(arguments
`(;; XXX: The tests only do style and coverage checks, which
;; fails due to deprecation warnings, etc.
#:tests? #f))
(native-inputs
(list python-coverage-test-runner python-pep8))
(propagated-inputs
(list python-pyaml))
(home-page "https://liw.fi/cliapp/")
(synopsis "Python framework for command line programs")
(description "@code{cliapp} is a Python framework for command line
programs. It contains the typical stuff such programs need to do, such
as parsing the command line for options, and iterating over input files.")
(license license:gpl2+)))
(define-public python-ttystatus
(package
(name "python-ttystatus")
(version "0.38")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "http://git.liw.fi/ttystatus")
;; There are no tags after ttystatus-0.36.
(commit "e9fc573326c5d1348f5fe56263b4f7a8c32f58c9")))
(sha256
(base32 "0v49q839nrwdm19c83wfmj6n2kw80xslwq9k0n5509r2h7wzjiqj"))
(file-name (git-file-name name version))))
(build-system python-build-system)
(native-inputs
(list python-coverage-test-runner python-pep8))
(arguments
`(#:phases
(modify-phases %standard-phases
;; check phase needs to be run before the build phase. If not,
;; coverage-test-runner looks for tests for the built source files,
;; and fails.
(delete 'check)
(add-before 'build 'check
(lambda _ (invoke "make" "check"))))))
(home-page "https://liw.fi/ttystatus/")
(synopsis "Python library for progress reporting and
status updates on terminals")
(description "@code{ttystatus} is a Python library for showing progress
reporting and status updates on terminals, for command line programs.
Output is automatically adapted to the width of the terminal: truncated
if it does not fit, and resized if the terminal size changes.")
(license license:gpl3+)))
(define-public python-astroid
(package
(name "python-astroid")
(version "2.11.7")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/PyCQA/astroid")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0lmm5bhszg1nj0xsjnh5nm39if2jzpa3ycgvhy6ddycz28dy568y"))))
(build-system python-build-system)
(propagated-inputs
(list python-lazy-object-proxy python-typing-extensions python-wrapt))
(native-inputs
(list python-pytest python-pytest-runner))
(home-page "https://github.com/PyCQA/astroid")
(synopsis "Python source code base representation")
(description "@code{python-astroid} provides a common base representation
of Python source code for projects such as pychecker, pyreverse, pylint, etc.
It provides a compatible representation which comes from the _ast module. It
rebuilds the tree generated by the builtin _ast module by recursively walking
down the AST and building an extended ast. The new node classes have
additional methods and attributes for different usages. They include some
support for static inference and local name scopes. Furthermore, astroid
builds partial trees by inspecting living objects.")
(license license:lgpl2.1+)))
(define-public python-isbnlib
(package
(name "python-isbnlib")
(version "3.10.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "isbnlib" version))
(sha256
(base32
"0iin0x2xqwyphyyzd0mzrq5v5xm7b6dlbb294k4dywra5qvbrgzm"))))
(build-system python-build-system)
(arguments '(#:tests? #f)) ; No test
(home-page "https://github.com/xlcnd/isbnlib")
(synopsis "Python library to work with ISBN strings")
(description "@code{python-isbnlib} is a (pure) python library that provides
several useful methods and functions to validate, clean, transform, hyphenate and
get metadata for ISBN strings. Its origin was as the core of isbntools. This short
version, is suitable to be include as a dependency in other projects.")
(license license:lgpl3+)))
(define-public python-isort
(package
(name "python-isort")
(version "5.12.0")
(source
(origin
(method git-fetch)
(uri (git-reference
;; Tests pass only from the Github sources
(url "https://github.com/timothycrosley/isort")
(commit version)))
(file-name (git-file-name name version))
(modules '((guix build utils)))
(snippet '(for-each delete-file (find-files "." "\\.whl$")))
(sha256
(base32
"1vbwc4gpffclf6hw08lvvgqlvsgfjlw7gjsm28jfcrln2pixla7j"))))
(build-system python-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(replace 'build
(lambda _
(invoke "python" "-m" "build" "--wheel" "--no-isolation" ".")))
(replace 'install
(lambda _
(let ((whl (car (find-files "dist" "\\.whl$"))))
(invoke "pip" "--no-cache-dir" "--no-input"
"install" "--no-deps" "--prefix" #$output whl))))
(add-after 'install 'install-example-plugins
(lambda _
(for-each (lambda (source-directory)
(invoke "python" "-m" "build" "--wheel"
"--no-isolation" "--outdir=dist"
source-directory))
'("example_isort_formatting_plugin"
"example_isort_sorting_plugin"
"example_shared_isort_profile"))
;; Install them to temporary storage, for the test.
(setenv "HOME" (getcwd))
(let ((example-whls (find-files "dist" "^example.*\\.whl$")))
(apply invoke "pip" "--no-cache-dir" "--no-input"
"install" "--user" "--no-deps" example-whls))))
(replace 'check
(lambda* (#:key tests? inputs outputs #:allow-other-keys)
(when tests?
(let ((bin (string-append #$output "/bin")))
(setenv "PATH" (string-append (getenv "PATH") ":" bin)))
(invoke "pytest" "-vv" "tests/unit/"
"-k" "not test_gitignore" ;requires git
"--ignore=tests/unit/test_deprecated_finders.py")))))))
(native-inputs
(list python-black
python-colorama
python-hypothesmith
python-libcst-minimal
python-natsort
python-poetry-core
python-pylama
python-pypa-build
python-pytest-mock
python-pytest))
(home-page "https://github.com/PyCQA/isort")
(synopsis "Python utility/library to sort python imports")
(description "@code{python-isort} is a python utility/library to sort
imports alphabetically, and automatically separated into sections. It
provides a command line utility, a python library and plugins for various
editors.")
(license license:expat)))
(define-public python-configparser
(package
(name "python-configparser")
(version "4.0.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "configparser" version))
(sha256
(base32
"1priacxym85yjcf68hh38w55nqswaxp71ryjyfdk222kg9l85ln7"))))
(native-inputs
(list python-setuptools-scm))
(build-system python-build-system)
(home-page "https://github.com/jaraco/configparser/")
(synopsis "Backport of configparser from python 3.5")
(description "@code{python-configparser} is a backport of
@code{configparser} from Python 3.5 so that it can be used directly
in other versions.")
(license license:expat)))
(define-public python-iniconfig
(package
(name "python-iniconfig")
(version "1.1.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "iniconfig" version))
(sha256
(base32
"0ckzngs3scaa1mcfmsi1w40a1l8cxxnncscrxzjjwjyisx8z0fmw"))))
(build-system python-build-system)
(home-page "https://github.com/RonnyPfannschmidt/iniconfig")
(synopsis "Simple INI-file parser")
(description "The @code{iniconfig} package provides a small and simple
INI-file parser module having a unique set of features ; @code{iniconfig}
@itemize
@item maintains the order of sections and entries ;
@item supports multi-line values with or without line-continuations ;
@item supports \"#\" comments everywhere ;
@item raises errors with proper line-numbers ;
@item raises an error when two sections have the same name.
@end itemize")
(license license:expat)))
(define-public python-mamba
(package
(name "python-mamba")
(version "0.11.2")
(source (origin
(method url-fetch)
(uri (pypi-uri "mamba" version))
(sha256
(base32
"15m4dpnpv9m60pdaygvwgi43fwqaivs3qxfxhspwrp47sbgwdkvm"))))
(build-system python-build-system)
(arguments `(#:tests? #f)) ; No test
(propagated-inputs
(list python-clint python-coverage))
(home-page "https://nestorsalceda.com/mamba/")
(synopsis "Test runner for Python")
(description
"Mamba is a Behaviour-Driven Development tool for Python developers.
Is heavily influenced from RSpec, Mocha, Jasmine or Ginkgo.")
(license license:expat)))
(define-public python-mando
(package
(name "python-mando")
(version "0.7.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "mando" version))
(sha256
(base32
"001mikga36i811pbc95rb45m2kzivkx4xb0fn3pzl4xnnjcskfhq"))))
(build-system python-build-system)
(arguments
(list #:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv")))))))
(propagated-inputs
(list python-rst2ansi python-six))
(native-inputs
(list python-pytest))
(home-page "https://mando.readthedocs.org/")
(synopsis
"Wrapper around argparse, allowing creation of complete CLI applications")
(description
"This package is a wrapper around argparse, allowing you to write complete CLI
applications in seconds while maintaining all the flexibility.")
(license license:expat)))
(define-public python-mwclient
(package
(name "python-mwclient")
(version "0.10.1")
(source
(origin
(method git-fetch)
;; The PyPI version wouldn't contain tests.
(uri (git-reference
(url "https://github.com/mwclient/mwclient")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "120snnsh9n5svfwkyj1w9jrxf99jnqm0jk282yypd3lpyca1l9hj"))))
(build-system python-build-system)
(propagated-inputs
(list python-requests-oauthlib python-six))
(native-inputs
(list python-mock python-pytest python-pytest-cov
python-pytest-runner python-responses))
(home-page "https://github.com/btongminh/mwclient")
(synopsis "MediaWiki API client")
(description "This package provides a MediaWiki API client.")
(license license:expat)))
(define-public python-kneed
(package
(name "python-kneed")
(version "0.7.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "kneed" version))
(sha256
(base32 "0vkwi0pr7nfkp3c46hnmx0275yx68v96v10rmspv0wis33x6f39l"))))
(build-system python-build-system)
(propagated-inputs
(list python-matplotlib python-numpy python-scipy))
(home-page "https://github.com/arvkevi/kneed")
(synopsis "Knee-point detection in Python")
(description "This package implements the kneedle algorithm. Given a set
of x and y values, kneed will return the knee point of the function. The knee
point is the point of maximum curvature.")
(license license:bsd-3)))
(define-public python-utils
(package
(name "python-utils")
(version "2.4.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "python-utils" version))
(sha256
(base32
"12c0glzkm81ljgf6pwh0d4rmdm1r7vvgg3ifzp8yp9cfyngw07zj"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key inputs outputs #:allow-other-keys)
(add-installed-pythonpath inputs outputs)
(delete-file "pytest.ini")
(invoke "pytest" "-vv"))))))
(native-inputs
`(("pytest-runner" ,python-pytest-runner)
("pytest" ,python-pytest)
("six" ,python-six)))
(home-page "https://github.com/WoLpH/python-utils")
(synopsis "Convenient utilities not included with the standard Python install")
(description
"Python Utils is a collection of small Python functions and classes which
make common patterns shorter and easier.")
(license license:bsd-2)))
(define-public python-diff-cover
(package
(name "python-diff-cover")
(version "7.5.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "diff_cover" version))
(sha256
(base32
"1z7bxnij2sqsiz9313nwcak7nshakpq4b6c05v13hkqyhd505cx4"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
;; missing fixture 'datadir'.
'(list "--ignore=tests/test_clover_violations_reporter.py"
;; Difference in line breaks
"-k" "not test_html_with_external_css")))
(propagated-inputs
(list python-chardet
python-jinja2
python-pluggy
python-pygments
python-tomli))
(native-inputs
(list python-flake8
python-poetry-core
python-pylint
python-pytest
python-pytest-flake8
python-pytest-mock))
(home-page "https://github.com/Bachmann1234/diff-cover")
(synopsis "Run coverage and linting reports on diffs")
(description "Automatically find diff lines that need test coverage. It
also finds diff lines that have violations (according to tools such as
pycodestyle, pyflakes, flake8, or pylint). This is used as a code quality
metric during code reviews.")
(license license:asl2.0)))
(define-public python-diff-match-patch
(package
(name "python-diff-match-patch")
(version "20200713")
(source
(origin
(method url-fetch)
(uri (pypi-uri "diff-match-patch" version))
(sha256
(base32
"063s8zcxz787xfg7d1wxpqh59fxg3iz85ww9zhyz4vaqm80mlvys"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "python" "-m" "unittest"
"diff_match_patch.tests")))))))
(home-page "https://github.com/diff-match-patch-python/diff-match-patch")
(synopsis "Synchronize plain text")
(description "Diff Match and Patch libraries offer robust algorithms to
perform the operations required for synchronizing plain text.")
(license license:asl2.0)))
(define-public python-icdiff
(package
(name "python-icdiff")
(version "2.0.5")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/jeffkaufman/icdiff")
(commit (string-append "release-" version))))
(file-name (git-file-name name version))
(sha256
(base32
"14gr9j2h7sfw47pwfzspm4zinywhqmzm4a0qz5c2k9wbixz120a4"))))
(build-system python-build-system)
(home-page "https://www.jefftk.com/icdiff")
(synopsis "Improved colored diff")
(description "This package provides colored diff functions that highlight
parts of the lines that were modified.")
(license license:psfl)))
(define-public python-dirsync
(package
(name "python-dirsync")
(version "2.2.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "dirsync" version))
(sha256
(base32
"1gm82jddm1lkazdi8lfsl1b3vi1z0252ng60mzjym8irnv94qfhy"))))
(build-system python-build-system)
(propagated-inputs
(list python-six))
(home-page "https://github.com/tkhyn/dirsync")
(synopsis "Advanced directory tree synchronisation tool")
(description "Advanced directory tree synchronisation tool.")
(license license:expat)))
(define-public python-levenshtein
(package
(name "python-levenshtein")
(version "0.12.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "python-Levenshtein" version))
(sha256
(base32
"1xj60gymwx1jl2ra9razx2wk8nb9cv1i7l8d14qsp8a8s7xra8yw"))))
(build-system python-build-system)
(home-page "https://github.com/ztane/python-Levenshtein")
(synopsis "Fast computation of Levenshtein distance and string similarity")
(description
"The Levenshtein Python C extension module contains functions for fast computation of
@enumerate
@item Levenshtein (edit) distance, and edit operations
@item string similarity
@item approximate median strings, and generally string averaging
@item string sequence and set similarity
@end enumerate
It supports both normal and Unicode strings.")
(license license:gpl2+)))
(define-public python-scandir
(package
(name "python-scandir")
(version "1.10.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "scandir" version))
(sha256
(base32 "1bkqwmf056pkchf05ywbnf659wqlp6lljcdb0y88wr9f0vv32ijd"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "python" "test/run_tests.py"))))))
(home-page "https://github.com/benhoyt/scandir")
(synopsis "Directory iteration function")
(description
"Directory iteration function like os.listdir(), except that instead of
returning a list of bare filenames, it yields DirEntry objects that include
file type and stat information along with the name. Using scandir() increases
the speed of os.walk() by 2-20 times (depending on the platform and file
system) by avoiding unnecessary calls to os.stat() in most cases.
This package is part of the Python standard library since version 3.5.")
(license license:bsd-3)))
(define-public python-factory-boy
(package
(name "python-factory-boy")
(version "3.2.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "factory_boy" version))
(sha256
(base32 "0pm5lbvnwm0kg5i6z611rg907yw1gy551f2advmpaz041ixjg3d9"))))
(build-system python-build-system)
(arguments
;; Tests are not included in the tarball.
`(#:tests? #f))
(propagated-inputs (list python-faker))
(home-page "https://github.com/benhoyt/scandir")
(synopsis "Versatile test fixtures replacement")
(description "Factory_boy is a fixtures replacement based on thoughtbot’s
factory_girl. As a fixtures replacement tool, it aims to replace static, hard
to maintain fixtures with easy-to-use factories for complex object. Instead
of building an exhaustive test setup with every possible combination of corner
cases, factory_boy allows you to use objects customized for the current test,
while only declaring the test-specific fields.")
(license license:expat)))
(define-public python-translate-toolkit
(package
(name "python-translate-toolkit")
(version "3.6.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "translate-toolkit" version ".tar.gz"))
(sha256
(base32 "0m4cpsp7x7h5m5agg4ybscf7y86wla46q2lvxpi2myplb6qlgcli"))))
(build-system python-build-system)
(native-inputs
(list python-pytest python-sphinx))
(propagated-inputs
(list python-babel
python-beautifulsoup4
python-chardet
python-diff-match-patch
python-levenshtein
python-lxml
python-six
python-vobject
python-pyyaml))
(arguments
;; TODO: tests are not run, because they end with
;; TypeError: parse() missing 2 required positional arguments: 'tree' and
;; 'parse_funcs'
;; during test setup.
(list #:tests? #f
#:phases
#~(modify-phases %standard-phases
;; translate-toolkit has many optional dependencies (see
;; optional.txt), which the sanity check does not understand.
(delete 'sanity-check))))
(home-page "https://toolkit.translatehouse.org")
(synopsis "Tools and API for translation and localization engineering")
(description
"Tools and API for translation and localization engineering. It contains
several utilities, as well as an API for building localization tools.")
(license license:gpl2+)))
(define-public python-gtts
(package
(name "python-gtts")
(version "2.3.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "gTTS" version))
(sha256
(base32
"1jsg1prpzr7gj5sn385mkv2v1i8xfc83ycm87hvsi2j0y366plps"))))
(build-system pyproject-build-system)
(arguments
;; Disable tests that require internet.
(list #:test-flags '(list "-k" "not net")))
(native-inputs
(list python-pytest python-testfixtures python-click python-requests))
(home-page "https://github.com/pndurette/gTTS")
(synopsis "Google Translate text-to-speech interface")
(description
"Google Text-to-Speech (gTTS) is a Python library and CLI tool to
interface with the Google Translate text-to-speech API. It lets you write
spoken MP3 data to a file, a file-like object (bytestring) for further audio
manipulation, or @code{stdout}.")
(license license:expat)))
(define-public python-packaging
(package/inherit python-packaging-bootstrap
(name "python-packaging")
(arguments
`(#:phases (modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(if tests?
(invoke "pytest" "-vv")
(format #t "test suite not run~%")))))))
(native-inputs (list python-pretend python-pytest))
(propagated-inputs (list python-pyparsing python-six))
(home-page "https://github.com/pypa/packaging")
(synopsis "Core utilities for Python packages")
(description "Packaging is a Python module for dealing with Python packages.
It offers an interface for working with package versions, names, and dependency
information.")
;; From 'LICENSE': This software is made available under the terms of
;; *either* of the licenses found in LICENSE.APACHE or LICENSE.BSD.
;; Contributions to this software is made under the terms of *both* these
;; licenses.
(license (list license:asl2.0 license:bsd-2))))
(define-public python-relatorio
(package
(name "python-relatorio")
(version "0.10.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "relatorio" version))
(sha256
(base32
"09nhrz80dfm60nssbvjgz4czzy4yzfa8gxczcdlzbgcnnvm914vb"))))
(build-system python-build-system)
(propagated-inputs
(list python-lxml python-genshi))
(native-inputs
(list python-magic))
(home-page "https://relatorio.tryton.org/")
(synopsis "Templating library able to output ODT and PDF files")
(description "Relatorio is a templating library which provides a way to
easily output ODT, ODS, PNG, SVG and several other kinds of files. Support
for more filetypes can be easily added by creating plugins for them.")
(license license:gpl3+)))
(define-public python-radon
(package
(name "python-radon")
(version "5.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "radon" version))
(sha256
(base32
"1vmf56zsf3paa1jadjcjghiv2kxwiismyayq42ggnqpqwm98f7fb"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(add-after 'unpack 'relax-requirements
(lambda _
(substitute* "setup.py"
((".*'future'.*")
"")
(("mando>=0\\.6,<0\\.7")
"mando>=0.6")
(("colorama==0.4.1")
"colorama>=0.4.1"))))
(replace 'check
(lambda _
(invoke "python" "radon/tests/run.py"))))))
(propagated-inputs (list python-colorama python-mando))
(native-inputs (list python-pytest python-pytest-mock))
(home-page "https://radon.readthedocs.org/")
(synopsis "Code Metrics in Python")
(description "Radon is a Python tool which computes various code metrics.
Supported metrics are:
@itemize @bullet
@item raw metrics: SLOC, comment lines, blank lines, &c.
@item Cyclomatic Complexity (i.e., McCabe’s Complexity)
@item Halstead metrics (all of them)
@item the Maintainability Index (a Visual Studio metric)
@end itemize")
(license license:expat)))
(define-public python-sure
(package
(name "python-sure")
(version "2.0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "sure" version))
(sha256
(base32
"1jmrskj399idw1czx6dvy2zfaijnwi02b55vx979ixp7q2mnzz68"))))
(build-system python-build-system)
(propagated-inputs
(list python-mock python-six))
(native-inputs
(list python-nose python-rednose))
(home-page "https://github.com/gabrielfalcao/sure")
(synopsis "Automated testing library in python for python")
(description
"Sure is a python library that leverages a DSL for writing assertions.
Sure is heavily inspired by @code{RSpec Expectations} and @code{should.js}.")
(license license:gpl3+)))
(define-public python-misaka
(package
(name "python-misaka")
(version "2.1.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "misaka" version))
(sha256
(base32
"1mzc29wwyhyardclj1vg2xsfdibg2lzb7f1azjcxi580ama55wv2"))))
(build-system python-build-system)
(arguments
`(;; Line 37 of setup.py calls self.run_command('develop')
;; in the 'check' phase. This command seems to be trying
;; to write to
;; /gnu/store/...-python-<version>/lib/python<version>/site-packages/
;; for which it does not have the permission to write.
#:tests? #f))
(propagated-inputs
(list python-cffi))
(home-page "https://github.com/FSX/misaka")
(synopsis "Python binding for Hoedown")
(description
"@code{Misaka} is a CFFI-based binding for @code{Hoedown}, a fast markdown processing
library written in C. It features a fast HTML renderer and functionality to make custom
renderers (e.g. man pages or LaTeX).")
(license license:expat)))
(define-public python-jsonpointer
(package
(name "python-jsonpointer")
(version "1.10")
(source
(origin
(method url-fetch)
(uri (pypi-uri "jsonpointer" version))
(sha256
(base32
"1cg0gvgqjysydv6p45v4jywg1jb3v48c7m3cbpi57zgf6nndr9cz"))))
(build-system python-build-system)
(home-page "https://github.com/stefankoegl/python-json-pointer")
(synopsis "Identify specific nodes in a JSON document")
(description "@code{jsonpointer} allows you to access specific nodes
by path in a JSON document (see RFC 6901).")
(license license:bsd-3)))
(define-public python-jsonpatch
(package
(name "python-jsonpatch")
(version "1.16")
(source
(origin
(method git-fetch)
;; pypi version lacks tests.js
(uri (git-reference
(url "https://github.com/stefankoegl/python-json-patch")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0k9pff06lxama3nhsc7cdxbp83422bdy8ifs52i6xkas8hpyzfzr"))))
(build-system python-build-system)
(propagated-inputs
(list python-jsonpointer))
(home-page "https://github.com/stefankoegl/python-json-patch")
(synopsis "Applying JSON Patches in Python 2.6+ and 3.x")
(description "@code{jsonpatch} is a library and program that allows
applying JSON Patches according to RFC 6902.")
(license license:bsd-3)))
(define-public python-jsonpatch-0.4
(package (inherit python-jsonpatch)
(name "python-jsonpatch")
(version "0.4")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/stefankoegl/python-json-patch")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1fq02y57kinyknxjcav0slcb0k9mwdffqw2hnlhdkpj7palh2mwk"))))))
(define-public python-rfc3986
(package
(name "python-rfc3986")
(version "1.4.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "rfc3986" version))
(sha256
(base32
"17dvx15m3r49bmif5zlli8kzjd6bys6psixzbp14sd5367d9h8qi"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "pytest" "-v"))))))
(native-inputs
(list python-pytest))
(home-page "https://rfc3986.readthedocs.io/")
(synopsis "Parse and validate URI references")
(description
"@code{rfc3986} is a Python implementation of RFC@tie{}3986 including
validation and authority parsing. This module also supports RFC@tie{}6874
which adds support for zone identifiers to IPv6 addresses.")
(license license:asl2.0)))
(define-public python-rfc3987
(package
(name "python-rfc3987")
(version "1.3.7")
(source
(origin
(method url-fetch)
(uri (pypi-uri "rfc3987" version))
(sha256
(base32
"192pclzs2y0yaywqkrlvd0x73740q310kvqvm6jldhi619mq59wi"))))
(build-system python-build-system)
(home-page "https://pypi.org/project/rfc3987/")
(synopsis "Parsing and validation of URIs (RFC 3986) and IRIs (RFC 3987)")
(description "@code{rfc3987} provides routines for parsing and
validation of URIs (see RFC 3986) and IRIs (see RFC 3987).")
(license license:gpl3+)))
;; The latest commit contains fixes for building with both python3 and python2.
(define-public python-rfc6555
(let ((commit "1a181b432312731f6742a5eb558dae4761d32361")
(revision "1"))
(package
(name "python-rfc6555")
(version (git-version "0.0.0" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/sethmlarson/rfc6555")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"1bxl17j9vs69cshcqnlwamr03hnykxqnwz3mdgi6x3s2k4q18npp"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(if tests?
;; Other tests require network access.
(invoke "pytest" "tests/test_ipv6.py")
#t))))))
(native-inputs
(list python-pytest))
(home-page "https://pypi.org/project/rfc6555/")
(synopsis "Python implementation of RFC 6555")
(description
"Python implementation of the Happy Eyeballs Algorithm described in RFC
6555. Provided with a single file and dead-simple API to allow easy vendoring
and integration into other projects.")
(license license:asl2.0))))
(define-public python-sacn
(package
(name "python-sacn")
(version "1.10.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "sacn" version))
(sha256
(base32 "02pqfwwx83lgb8nj9p0s6vyi1s7wjgbx9k0bzlyz8qapszzdsr37"))))
(build-system python-build-system)
(arguments
(list #:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv")))))))
(native-inputs (list python-pytest))
(home-page "https://github.com/Hundemeier/sacn")
(synopsis
"Python library for sending and receiving sACN data")
(description
"This package provides a Python library for sending and receiving
sACN (Streaming Architecture for Control Networks) data, a standard
protocol used for controlling lighting and other devices over
a network.")
(license license:expat)))
(define-public python-bagit
(package
(name "python-bagit")
(version "1.7.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "bagit" version))
(sha256
(base32
"1m6y04qmig0b5hzb35lnaw3d2yfydb7alyr1579yblvgs3da6j7j"))))
(build-system python-build-system)
(native-inputs
(list python-setuptools-scm python-coverage python-mock))
(home-page "https://libraryofcongress.github.io/bagit-python/")
(synopsis "Create and validate BagIt packages")
(description "Bagit is a Python library and command line utility for working
with BagIt style packages. BagIt is a minimalist packaging format for digital
preservation.")
(license license:cc0)))
(define-public python-prov
(package
(name "python-prov")
(version "2.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "prov" version))
(sha256
(base32
"1vi2fj31vygfcqrkimdmk52q2ldw08g9fn4v4zlgdfgcjlhqyhxn"))))
(build-system python-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'fix-rdflib-6-compatibility
(lambda _
;; See https://github.com/trungdong/prov/issues/151
(substitute* "src/prov/tests/test_rdf.py"
(("\\.serialize\\(format=\"nt\"\\)")
".serialize(format=\"nt\", encoding=\"utf-8\")")))))))
(propagated-inputs
(list python-dateutil python-lxml python-networkx python-rdflib))
(native-inputs
(list graphviz python-pydot))
(home-page "https://github.com/trungdong/prov")
(synopsis
"W3C Provenance Data Model supporting PROV-JSON, PROV-XML and PROV-O (RDF)")
(description
"This package provides a library for W3C Provenance Data Model supporting
PROV-O (RDF), PROV-XML, PROV-JSON import/export.")
(license license:expat)))
(define-public python-arcp
(package
(name "python-arcp")
(version "0.2.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "arcp" version))
(sha256
(base32
"1p8mfyjssa6pbn5dp6pyzv9yy6kwm2rz5jn2kjbq5vy9f9wsq5sw"))))
(build-system python-build-system)
(native-inputs
(list python-pytest))
(home-page "https://arcp.readthedocs.io/")
(synopsis
"Archive and Package URI parser and generator")
(description
"@acronym{arcp, Archive and Package} provides functions for creating
@code{arcp_} URIs, which can be used for identifying or parsing hypermedia files
packaged in an archive or package, like a ZIP file. arcp URIs can be used to
consume or reference hypermedia resources bundled inside a file archive or an
application package, as well as to resolve URIs for archive resources within a
programmatic framework. This URI scheme provides mechanisms to generate a
unique base URI to represent the root of the archive, so that relative URI
references in a bundled resource can be resolved within the archive without
having to extract the archive content on the local file system. An arcp URI can
be used for purposes of isolation (e.g. when consuming multiple archives),
security constraints (avoiding \"climb out\" from the archive), or for
externally identiyfing sub-resources referenced by hypermedia formats.")
(license license:asl2.0)))
(define-public python-shellescape
(package
(name "python-shellescape")
(version "3.8.1")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/chrissimpkins/shellescape")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0wzccxk139qx1lb2g70f5b2yh9zq15nr2mgvqdbfabg5zm0vf1qw"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? inputs outputs #:allow-other-keys)
(when tests?
(add-installed-pythonpath inputs outputs)
(invoke "python" "tests/test_shellescape.py"))
#t)))))
(native-inputs
(list python-pytest))
(home-page "https://github.com/chrissimpkins/shellescape")
(synopsis
"Shell escape a string to safely use it as a token in a shell command")
(description
"The shellescape Python module defines the @code{shellescape.quote()}
function that returns a shell-escaped version of a Python string. This is a
backport of the @code{shlex.quote()} function from Python 3.8 that makes it
accessible to users of Python 3 versions < 3.3 and all Python 2.x versions.")
(license license:expat)))
(define-public python-validators
(package
(name "python-validators")
(version "0.18.2")
(source (origin
(method url-fetch)
(uri (pypi-uri "validators" version))
(sha256
(base32
"19lypf7hm7p203ay3v8zmckc5rv6889zkfdm16nki1972f99mk9p"))))
(build-system python-build-system)
(arguments
'(#:phases (modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "pytest" "-vv"))))))
(propagated-inputs
(list python-decorator python-six))
(native-inputs
(list python-flake8 python-isort python-pytest))
(home-page "https://github.com/kvesteri/validators")
(synopsis "Data validation library")
(description
"This package contains validators for different things such as email
addresses, IP addresses, URLs, hashes and more. It has been designed to
be easy to use and not require defining a schema or form just to validate
some input.")
(license license:expat)))
(define-public python-validate-email
(package
(name "python-validate-email")
(version "1.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "validate_email" version))
(sha256
(base32
"1bxffaf5yz2cph8ki55vdvdypbwkvn2xr1firlcy62vqbzf1jivq"))))
(build-system python-build-system)
(home-page "https://github.com/syrusakbary/validate_email")
(synopsis "Verifies if an email address is valid and really exists")
(description "@code{validate_email} can be used to verify if an email
address is valid and really exists.")
(license license:lgpl3+)))
(define-public python-flex
(package
(name "python-flex")
(version "6.14.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "flex" version))
(sha256
(base32
"1sr91f5sqywj4040jm3cq4333fp8hbmmr7v6v05a3h0sgyixcbi9"))))
(build-system python-build-system)
(propagated-inputs
(list python-click
python-jsonpointer
python-pyyaml
python-requests
python-rfc3987
python-six
python-strict-rfc3339
python-validate-email))
(home-page "https://github.com/pipermerriam/flex")
(synopsis "Validates Swagger schemata")
(description "@code{flex} can be used to validate Swagger schemata.")
(license license:bsd-3)))
(define-public python-marshmallow
(package
(name "python-marshmallow")
(version "3.19.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "marshmallow" version))
(sha256
(base32
"0y6vpq2p5841kcw2qil68la0rx9z1vmxzj3dxjv99kjhsq7jq0wh"))))
(build-system pyproject-build-system)
(propagated-inputs
(list python-packaging))
(native-inputs
(list python-flake8
python-flake8-bugbear
python-mypy
python-pytest
python-pytz
python-simplejson))
(home-page "https://github.com/marshmallow-code/marshmallow")
(synopsis "Convert complex datatypes to and from native Python datatypes")
(description "@code{marshmallow} provides a library for converting complex
datatypes to and from native Python datatypes.")
(license license:expat)))
(define-public python-marshmallow-jsonapi
(package
(name "python-marshmallow-jsonapi")
(version "0.24.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "marshmallow-jsonapi" version))
(sha256
(base32 "1d9pxcgmln4gls99vwj1h24qv0lz7fb2jqmqrsiv1pid1snc125x"))))
(build-system python-build-system)
(propagated-inputs
(list python-marshmallow))
(native-inputs
(list python-faker
python-flake8
python-flake8-bugbear
python-flask
python-mock
python-pytest
python-tox))
(home-page "https://github.com/marshmallow-code/marshmallow-jsonapi")
(synopsis "JSON:API 1.0 formatting with Marshmallow")
(description
"The marshmallow-jsonapi package provides a simple way to produce
@uref{https://jsonapi.org, JSON:API}-compliant data in any Python Web framework.
It includes optional utilities to integrate with Flask.")
(license license:expat)))
(define-public python-apispec
(package
(name "python-apispec")
(version "6.0.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "apispec" version))
(sha256
(base32
"11vqxwdxmm7qmyhdbxk4gnx37nbzmn266ah92gi4pvzd76vq0vg7"))))
(build-system pyproject-build-system)
(arguments
(list
;; Disable validation tests since they require
;; the optional 'prance' library which is not
;; yet in Guix.
#:test-flags '(list "-k" "not openapi_tools_validate")))
(propagated-inputs
(list python-packaging))
(native-inputs
(list python-flake8
python-flake8-bugbear
python-marshmallow
python-mypy
python-pytest
python-pyyaml))
(home-page "https://github.com/marshmallow-code/apispec")
(synopsis "Swagger/OpenAPI specification generator")
(description "@code{python-apispec} is a pluggable API specification
generator. It currently supports the OpenAPI specification, formerly known as
Swagger.")
(license license:expat)))
(define-public python-apispec-webframeworks
(package
(name "python-apispec-webframeworks")
(version "0.5.2")
(source (origin
(method url-fetch)
(uri (pypi-uri "apispec-webframeworks" version))
(sha256
(base32
"1wyw30402xq2a8icrsjmy9v43jyvawcjd85ccb2zicqlg4k5pcqd"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-apispec))
(native-inputs
(list python-bottle
python-flake8
python-flake8-bugbear
python-flask
python-mock
python-pytest
python-pyyaml
python-tornado
python-tox))
(home-page "https://github.com/marshmallow-code/apispec-webframeworks")
(synopsis "Web framework plugins for apispec")
(description "This package provides plugins for using @code{apispec} with
web frameworks.")
(license license:expat)))
(define-public python-flasgger
(package
(name "python-flasgger")
(version "0.9.5")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/rochacbruno/flasgger")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "0a2djgfq905a4in16068qz0ikg88dm4nbckaamhaz2v9khllr0bi"))))
(build-system pyproject-build-system)
(arguments
(list
;; This test fails due to missing fixtures
#:test-flags '(list "-k" "not test_swag")
#:phases
'(modify-phases %standard-phases
(add-after 'unpack 'prepare-check
(lambda _
;; This requires a dummy package "flasgger_package" to be installed.
(delete-file "examples/package_example.py")
;; These fail with an internal server error
(for-each delete-file '("examples/marshmallow_apispec.py"
"examples/validation.py")))))))
(propagated-inputs
(list python-flask python-pyyaml python-jsonschema python-mistune
python-six))
(native-inputs
(list python-apispec
python-apispec-webframeworks
python-decorator
python-flake8
python-flask-jwt
python-flask-restful
python-flex
python-marshmallow
python-pytest
python-pytest-cov))
(home-page "https://github.com/rochacbruno/flasgger/")
(synopsis "Extract Swagger specs from your Flask project")
(description "@code{python-flasgger} allows extracting Swagger specs
from your Flask project. It is a fork of Flask-Swagger.")
(license license:expat)))
(define-public python-swagger-spec-validator
(package
(name "python-swagger-spec-validator")
(version "2.4.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "swagger-spec-validator" version))
(sha256
(base32
"11g627icrsqwazsncwi0sdvprcj6hwaayw5xk3xsj8d97bmrzqjp"))))
(build-system python-build-system)
(propagated-inputs
(list python-jsonschema python-pyyaml python-six))
(home-page
"https://github.com/Yelp/swagger_spec_validator")
(synopsis "Validation of Swagger specifications")
(description "@code{swagger_spec_validator} provides a library for
validating Swagger API specifications.")
(license license:asl2.0)))
(define-public python-apache-libcloud
(package
(name "python-apache-libcloud")
(version "3.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "apache-libcloud" version))
(sha256
(base32
"1b28j265kvibgxrgxx0gwfm6cmv252c8ph1j2vb0cpms8ph5if5v"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch-ssh
(lambda* (#:key inputs #:allow-other-keys)
(substitute* "libcloud/compute/ssh.py"
(("'ssh'")
(string-append "'" (search-input-file inputs "/bin/ssh")
"'")))))
(add-after 'unpack 'patch-tests
(lambda _
(substitute* "libcloud/test/compute/test_ssh_client.py"
(("^class ShellOutSSHClientTests")
"@unittest.skip(\"Guix container doesn't have ssh service\")
class ShellOutSSHClientTests"))))
(add-before 'check 'copy-secret
(lambda _
(copy-file "libcloud/test/secrets.py-dist"
"libcloud/test/secrets.py"))))))
(inputs
(list openssh))
(propagated-inputs
(list python-paramiko python-requests))
(native-inputs
(list python-lockfile python-mock python-pytest python-pytest-runner
python-requests-mock))
(home-page "https://libcloud.apache.org/")
(synopsis "Unified Cloud API")
(description "@code{libcloud} is a Python library for interacting with
many of the popular cloud service providers using a unified API.")
(license license:asl2.0)))
(define-public python-smmap
(package
(name "python-smmap")
(version "3.0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "smmap" version))
(sha256
(base32 "0ijlnv60y8f41py1wnn5n1a1i81cxd9dfpdhr0k3cgkrcbz8850p"))))
(build-system python-build-system)
(native-inputs
(list python-nosexcover))
(home-page "https://github.com/Byron/smmap")
(synopsis "Python sliding window memory map manager")
(description "@code{smmap} is a pure Python implementation of a sliding
window memory map manager.")
(license license:bsd-3)))
(define-public python-regex
(package
(name "python-regex")
(version "2022.1.18")
(source (origin
(method url-fetch)
(uri (pypi-uri "regex" version))
(sha256
(base32
"05ir92d0cmv8wkafn3r05j5q47l6shg7cpdblp2a8m407b02vwwp"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key inputs outputs #:allow-other-keys)
(add-installed-pythonpath inputs outputs)
(invoke "python" "-c"
"from regex.test_regex import test_main ; test_main()"))))))
(home-page "https://bitbucket.org/mrabarnett/mrab-regex")
(synopsis "Alternative regular expression module")
(description "This regular expression implementation is backwards-
compatible with the standard @code{re} module, but offers additional
functionality like full case-folding for case-insensitive matches in Unicode.")
(license license:psfl)))
(define-public python-pyopengl
(package
(name "python-pyopengl")
(version "3.1.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "PyOpenGL" version))
(sha256
(base32
"09syrsfrcknr1k2wmj05gfd5d0dyjfxzbipzbd0agv9775vwi9lf"))))
(build-system python-build-system)
(inputs
(list mesa freeglut glu))
(arguments
`(#:tests? #f ; Tests fail: AttributeError: 'GLXPlatform' object has no
;attribute 'OSMesa'
#:phases
(modify-phases %standard-phases
(add-before 'build 'fix-paths
(lambda* (#:key inputs outputs #:allow-other-keys)
(substitute* '("OpenGL/platform/ctypesloader.py")
(("filenames_to_try = \\[\\]") "filenames_to_try = [name]"))
(substitute* '("OpenGL/platform/glx.py" "tests/check_glut_load.py")
(("'GL'")
(string-append "'" (assoc-ref inputs "mesa") "/lib/libGL.so'"))
(("'GLU'")
(string-append "'" (assoc-ref inputs "glu") "/lib/libGLU.so'"))
(("'glut',")
(string-append "'" (assoc-ref inputs "freeglut") "/lib/libglut.so',"))
(("'GLESv1_CM'")
(string-append "'" (assoc-ref inputs "mesa") "/lib/libGLESv1_CM.so'"))
(("'GLESv2'")
(string-append "'" (assoc-ref inputs "mesa") "/lib/libGLESv2.so'")))
;; Not providing libgle. It seems to be very old.
#t)))))
(home-page "https://pyopengl.sourceforge.net")
(synopsis "Standard OpenGL bindings for Python")
(description
"PyOpenGL is the most common cross platform Python binding to OpenGL and
related APIs. The binding is created using the standard @code{ctypes}
library.")
(license license:bsd-3)))
(define-public python-pyopengl-accelerate
(package
(inherit python-pyopengl)
(name "python-pyopengl-accelerate")
(version "3.1.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "PyOpenGL-accelerate" version))
(sha256
(base32
"1hydrpdn4p4z6mlczcg1y4s0z8si3rs6zq8x4ql558pcaq1312md"))))
(inputs
(list mesa python-numpy)) ; for cython module
; numpy_formathandler, thus not propagated
(arguments
`(#:tests? #f
#:phases
(modify-phases %standard-phases
(delete 'fix-paths))))
(synopsis "Acceleration code for PyOpenGL")
(description
"This is the Cython-coded accelerator module for PyOpenGL.")))
(define-public python-glcontext
(let (;; Upstream is known for abusing mutable tag, hence pinpoint the
;; relevant commit.
(revision "1")
(commit "0af21b7c8a8cc0e76f4d9aff6a4f156f43d37333"))
(package
(name "python-glcontext")
(version (git-version "2.4.0" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/moderngl/glcontext")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"03xpw776pvv8c5n58049yczlkgcqdh9vfcpjlghh3p6cal3yiq8a"))))
(build-system pyproject-build-system)
(arguments
(list #:phases #~(modify-phases %standard-phases
(add-before 'build 'fix-lib-paths
(lambda* (#:key inputs outputs #:allow-other-keys)
(let ((mesa (assoc-ref inputs "mesa"))
(libx11 (assoc-ref inputs "libx11")))
(substitute* '("glcontext/x11.cpp"
"glcontext/egl.cpp")
(("\"libGL.so\"")
(string-append "\"" mesa "/lib/libGL.so\""))
(("\"libEGL.so\"")
(string-append "\"" mesa "/lib/libEGL.so\""))
(("\"libX11.so\"")
(string-append "\"" libx11 "/lib/libX11.so\"")))
(substitute* '("glcontext/__init__.py")
(("find_library\\('GL'\\)")
(string-append "'" mesa "/lib/libGL.so'"))
(("find_library\\('EGL'\\)")
(string-append "'" mesa "/lib/libEGL.so'"))
(("find_library\\(\"X11\"\\)")
(string-append "'" libx11 "/lib/libX11.so'"))))))
(replace 'check
(lambda* (#:key inputs outputs tests?
#:allow-other-keys)
(when tests?
(system "Xvfb :1 &")
(setenv "DISPLAY" ":1")
(add-installed-pythonpath inputs outputs)
(invoke "pytest" "tests")))))))
(inputs (list libx11 mesa))
(native-inputs (list xorg-server-for-tests python-pytest python-psutil))
(home-page "https://github.com/moderngl/glcontext")
(synopsis "Portable OpenGL Context for ModernGL")
(description "Python-glcontext is a library providing an OpenGL
implementation for ModernGL on multiple platforms.")
(license license:expat))))
(define-public python-rencode
(package
(name "python-rencode")
(version "1.0.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "rencode" version))
(sha256
(base32
"0mzwdq1is7kyyr32i5k4iz6g5xxdvmiyc132jnc60p9m6lnwjrpv"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'check 'delete-bogus-test
;; This test requires /home/aresch/Downloads, which is not provided by
;; the build environment.
(lambda _
(delete-file "rencode/t.py")
#t)))))
(native-inputs (list pkg-config python-cython))
(home-page "https://github.com/aresch/rencode")
(synopsis "Serialization of heterogeneous data structures")
(description
"The @code{rencode} module is a data structure serialization library,
similar to @code{bencode} from the BitTorrent project. For complex,
heterogeneous data structures with many small elements, r-encoding stake up
significantly less space than b-encodings. This version of rencode is a
complete rewrite in Cython to attempt to increase the performance over the
pure Python module.")
(license license:bsd-3)))
(define-public python-pysocks
(package
(name "python-pysocks")
(version "1.7.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "PySocks" version))
(sha256
(base32
"184sg65mbmih6ljblfsxcmq5js5l7dj3gpn618w9q5dy3rbh921z"))))
(build-system python-build-system)
(arguments `(#:tests? #f))
(home-page "https://github.com/Anorov/PySocks")
(synopsis "SOCKS client module")
(description "@code{pysocks} is an updated and semi-actively maintained
version of @code{SocksiPy} with bug fixes and extra features.")
(license license:bsd-3)))
(define-public python-pydiff
(package
(name "python-pydiff")
(version "0.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pydiff" version))
(sha256
(base32
"1als83h9w0gab24ipyna6khm390qmpnpkc5jksmdbs2xc8hp2z44"))))
(build-system python-build-system)
(home-page "https://github.com/myint/pydiff")
(synopsis "Library to diff two Python files at the bytecode level")
(description
"@code{pydiff} makes it easy to look for actual code changes while
ignoring formatting changes.")
(license license:expat)))
(define-public python-pydub
(package
(name "python-pydub")
(version "0.25.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pydub" version))
(sha256
(base32
"03ykn2kp6qglsrzqi5h79z5cp3kl9mknasv0d6jv5jj9k77362lq"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'fix-ffmpeg-path
(lambda* (#:key inputs #:allow-other-keys)
(let ((ffmpeg (assoc-ref inputs "ffmpeg")))
(substitute* '("pydub/utils.py")
(("return \"ffmpeg\"")
(string-append "return \"" ffmpeg "/bin/ffmpeg\""))
(("return \"ffplay\"")
(string-append "return \"" ffmpeg "/bin/ffplay\""))
(("return \"ffprobe\"")
(string-append "return \"" ffmpeg "/bin/ffprobe\""))
(("warn\\(\"Couldn't find ff") "# warn\\(\"Couldn't find ff"))
#t))))))
(home-page "https://pydub.com")
(inputs
(list ffmpeg))
(propagated-inputs
(list python-scipy))
(synopsis "Manipulate audio with a high level interface in Python")
(description
"@code{pydub} makes it easy to manipulate audio in Python. It relies on
@code{ffmpeg} to open various audio formats.")
(license license:expat))) ; MIT license
(define-public python-tqdm
(package
(name "python-tqdm")
(version "4.64.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "tqdm" version))
(sha256
(base32
"1r7i9kswpnrx4ppfvzz6discb04j1rqkqxdwa2sc2la900m6hksz"))))
(build-system python-build-system)
(arguments
'(#:phases (modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "pytest" "-vv"
"-o" "asyncio_mode=auto"
"-k" "not perf"))))))
(native-inputs
(list python-pytest python-pytest-asyncio python-pytest-timeout
python-setuptools-scm python-toml))
(home-page "https://github.com/tqdm/tqdm")
(synopsis "Fast, extensible progress meter")
(description
"Make loops show a progress bar on the console by just wrapping any
iterable with @code{|tqdm(iterable)|}. Offers many options to define
design and layout.")
(license (list license:mpl2.0 license:expat))))
(define-public python-pkginfo
(package
(name "python-pkginfo")
(version "1.9.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pkginfo" version))
(sha256
(base32 "0inh57664sx2vlbd3913dsc9nz21ysb9vk591qpkg90qhxp8kmcg"))))
(build-system pyproject-build-system)
(native-inputs
(list python-pytest))
(home-page "https://code.launchpad.net/~tseaver/pkginfo/trunk")
(synopsis "Query metadatdata from sdists, bdists, and installed packages")
(description
"API to query the distutils metadata written in @file{PKG-INFO} inside a
source distriubtion (an sdist) or a binary distribution (e.g., created by
running bdist_egg). It can also query the EGG-INFO directory of an installed
distribution, and the *.egg-info stored in a \"development checkout\" (e.g,
created by running @code{python setup.py develop}).")
(license license:expat)))
(define-public python-twine
(package
(name "python-twine")
(version "1.15.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "twine" version))
(sha256
(base32 "11rpd653zcgzkq3sgwkzs3mpxl3r5rij59745ni84ikv8smjmlm3"))))
(build-system python-build-system)
(propagated-inputs
(list python-tqdm
python-packaging
python-pkginfo
python-readme-renderer
python-requests
python-requests-toolbelt))
(home-page "https://github.com/pypa/twine")
(synopsis "Collection of utilities for interacting with PyPI")
(description
"@code{twine} currently supports registering projects and uploading
distributions. It authenticates the user over HTTPS, allows them to pre-sign
their files and supports any packaging format (including wheels).")
(license license:asl2.0)))
(define-public python-linecache2
(package
(name "python-linecache2")
(version "1.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "linecache2" version))
(sha256
(base32
"0z79g3ds5wk2lvnqw0y2jpakjf32h95bd9zmnvp7dnqhf57gy9jb"))))
(build-system python-build-system)
(arguments
`(;; The tests depend on unittest2, and our version is a bit too old.
#:tests? #f))
(native-inputs
`(("python-pbr" ,python-pbr-minimal)))
(home-page
"https://github.com/testing-cabal/linecache2")
(synopsis "Backports of the linecache module")
(description
"The linecache module allows one to get any line from any file, while
attempting to optimize internally, using a cache, the common case where many
lines are read from a single file.")
(license license:psfl)))
(define-public python-traceback2
(package
(name "python-traceback2")
(version "1.4.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "traceback2" version))
(sha256
(base32
"0c1h3jas1jp1fdbn9z2mrgn3jj0hw1x3yhnkxp7jw34q15xcdb05"))))
(build-system python-build-system)
(arguments
`(;; python-traceback2 and python-unittest2 depend on one another.
#:tests? #f))
(native-inputs
`(("python-pbr" ,python-pbr-minimal)))
(propagated-inputs
(list python-linecache2 python-six))
(home-page
"https://github.com/testing-cabal/traceback2")
(synopsis "Backports of the traceback module")
(description
"This module provides a standard interface to extract, format and print
stack traces of Python programs. It exactly mimics the behavior of the Python
interpreter when it prints a stack trace.")
(license license:psfl)))
(define-public python-tracerite
(package
(name "python-tracerite")
(version "1.1.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "tracerite" version))
(sha256
(base32
"0jwy5wwl0rcsgnx7hhq4z7ji3lx271sar4v2a1rmyh5vsj7sn784"))))
(build-system pyproject-build-system)
(native-inputs (list python-setuptools-scm))
(propagated-inputs (list python-html5tagger))
(home-page "https://github.com/sanic-org/tracerite")
(synopsis "Human-readable HTML tracebacks")
(description
"@code{tracerite} converts Python tracebacks into useful error messages
in human-readable HTML format.")
(license license:unlicense)))
(define-public python-ratelimiter
(package
(name "python-ratelimiter")
(version "1.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ratelimiter" version))
(sha256
(base32
"1dhz85mj5bqd2mij84ncs6pz32hgidr79hay4aqfmzaa4rbb497p"))))
(build-system python-build-system)
(arguments
'(#:tests? #f)) ; There are no tests in the pypi archive.
(home-page "https://github.com/RazerM/ratelimiter")
(synopsis "Simple rate limiting object")
(description
"The @code{ratelimiter} module ensures that an operation will not be
executed more than a given number of times during a given period.")
(license license:asl2.0)))
(define-public python-jsonrpclib-pelix
(package
(name "python-jsonrpclib-pelix")
(version "0.3.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "jsonrpclib-pelix" version))
(sha256
(base32
"0f83z5zi7w32vprhk1dyc94ir1bh4hdd57bjdbwkq9ykng8qilhl"))))
(build-system python-build-system)
(arguments
`(#:tests? #f)) ; no tests in PyPI tarball
(home-page "https://github.com/tcalmant/jsonrpclib/")
(synopsis "JSON-RPC 2.0 client library for Python")
(description
"This library implements the JSON-RPC v2.0
specification (backwards-compatible) as a client library for Python. This
version is a fork of jsonrpclib by Josh Marshall, usable with Pelix remote
services.")
(license license:asl2.0)))
(define-public python-setuptools-scm-git-archive
(package
(name "python-setuptools-scm-git-archive")
(version "1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "setuptools_scm_git_archive" version))
(sha256
(base32
"1nii1sz5jq75ilf18bjnr11l9rz1lvdmyk66bxl7q90qan85yhjj"))))
(build-system python-build-system)
(arguments
'(#:phases (modify-phases %standard-phases
(add-after 'unpack 'dont-install-defunct-egginfo
(lambda _
;; When a ".git" directory is missing, the setup.py
;; script invokes setuptools.setup twice, once with
;; "0" as the version. Prevent that.
(substitute* "setup.py"
(("if not isdir\\('\\.git'\\):")
"if False:")))))))
(native-inputs
(list python-pytest))
(propagated-inputs
(list python-setuptools-scm))
(home-page "https://github.com/Changaco/setuptools_scm_git_archive/")
(synopsis "Setuptools_scm plugin for git archives")
(description
"The setuptools_scm_git_archive package is a plugin to
setuptools_scm, which supports obtaining versions from git archives that
belong to tagged versions.")
(license license:expat)))
(define-public python-setuptools-git
(package
(name "python-setuptools-git")
(version "1.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "setuptools-git" version))
(sha256
(base32
"0i84qjwp5m0l9qagdjww2frdh63r37km1c48mrvbmaqsl1ni6r7z"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
;; This is needed for tests.
(add-after 'unpack 'configure-git
(lambda _
(setenv "HOME" "/tmp")
(invoke "git" "config" "--global" "user.email" "guix")
(invoke "git" "config" "--global" "user.name" "guix")
#t)))))
(native-inputs
`(("git" ,git-minimal)))
(home-page "https://github.com/msabramo/setuptools-git")
(synopsis "Setuptools revision control system plugin for Git")
(description
"This package provides a plugin for Setuptools for revision control with
Git.")
(license license:bsd-3)))
(define-public python-setuptools-rust
(package
(name "python-setuptools-rust")
(version "1.6.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "setuptools-rust" version))
(sha256
(base32 "0qi274r0fcnvxa8vs8vyhcknnzhq8pd0ig5zk1wmjc63x96p6vn8"))))
(build-system pyproject-build-system)
(arguments '(#:tests? #f)) ;no tests
(propagated-inputs
(list python-semantic-version python-typing-extensions))
(home-page "https://github.com/PyO3/setuptools-rust")
(synopsis "Setuptools plugin for Rust extensions")
(description
"@code{setuptools-rust} is a plugin for @code{setuptools} to build
Rust Python extensions implemented with @code{PyO3} or @code{rust-cpython}.")
(license license:expat)))
(define-public python-pyclipper
(package
(name "python-pyclipper")
(version "1.3.0.post3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pyclipper" version))
(sha256
(base32 "0vqzbmq2di1jaj6230m5i1ld0mg6wdb1c6r6i5zli54varavr7v3"))
(modules '((guix build utils)))
(snippet
'(begin
;; This file is generated by Cython.
(delete-file "src/pyclipper/_pyclipper.cpp") #t))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'build 'cythonize-sources
(lambda _
(with-directory-excursion "src/pyclipper"
(invoke "cython" "--cplus" "_pyclipper.pyx")))))))
(native-inputs
(list python-cython python-setuptools-scm
python-pytest python-pytest-runner))
(home-page "https://github.com/greginvm/pyclipper")
(synopsis "Wrapper for Angus Johnson's Clipper library")
(description
"Pyclipper is a Cython wrapper for the C++ translation of the
Angus Johnson's polygon clipping Clipper library (ver. 6.4.2).")
(license license:expat)))
(define-public python-tempdir
(package
(name "python-tempdir")
(version "0.7.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "tempdir" version))
(sha256
(base32
"13msyyxqbicr111a294x7fsqbkl6a31fyrqflx3q7k547gnq15k8"))))
(build-system python-build-system)
(home-page "https://pypi.org/project/tempdir/")
(arguments
;; the package has no tests
'(#:tests? #f))
(synopsis "Python library for managing temporary directories")
(description
"This library manages temporary directories that are automatically
deleted with all their contents when they are no longer needed. It is
particularly convenient for use in tests.")
(license license:expat)))
(define-public python-tempora
(package
(name "python-tempora")
(version "5.0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "tempora" version))
(sha256
(base32 "09wirlk5vmxlhl9rnxp7g5qz2nsd6b0gnzk5fczbz0s8lsbz386b"))))
(build-system pyproject-build-system)
(arguments
;; Do not test the myproject.toml build as it tries to pull
;; dependencies from the Internet.
(list #:test-flags #~'("-k" "not project")))
(native-inputs
(list python-freezegun
python-pytest
python-pytest-black
python-pytest-checkdocs
python-pytest-cov
python-pytest-enabler
python-pytest-flake8
python-pytest-freezegun
python-pytest-mypy
python-setuptools-scm
python-types-freezegun
python-types-pytz))
(propagated-inputs (list python-jaraco-functools python-pytz))
(home-page "https://github.com/jaraco/tempora")
(synopsis "Python date and time objects and routines")
(description "The @code{tempora} Python library contains miscellaneous
date and time related utilities and constants, routines for measuring,
profiling, and getting datetime-aware @acronym{UTC, Coordinated Universal
Time} values as well as an event scheduler.")
(license license:expat)))
(define-public python-semver
(package
(name "python-semver")
(version "2.9.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "semver" version))
(sha256
(base32
"183kg1rhzz3hqizvphkd8hlbf1zxfx8737zhfkmqzxi71jmdw7pd"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(replace 'check
(lambda _
(delete-file "setup.cfg")
(invoke "py.test"))))))
(native-inputs
(list python-pytest))
(home-page "https://github.com/k-bx/python-semver")
(synopsis "Python helper for Semantic Versioning")
(description "This package provides a Python library for
@url{Semantic Versioning, http://semver.org/}.")
(license license:bsd-3)))
(define-public python-pyro4
(package
(name "python-pyro4")
(version "4.77")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Pyro4" version))
(sha256
(base32 "0gsjg869y4gpy265s1gj1f2qy6jn5iz8r2bwwnq78r1r5yi15zib"))))
(build-system python-build-system)
(arguments
'(#:tests? #f)) ;FIXME: Some tests require network access.
(native-inputs
(list python-cloudpickle python-dill python-msgpack))
(propagated-inputs
(list python-serpent))
(home-page "https://pyro4.readthedocs.io")
(synopsis "Distributed object middleware for Python")
(description
"Pyro enables you to build applications in which objects can talk to each
other over the network. You can just use normal Python method calls to call
objects on other machines, also known as remote procedure calls (RPC).")
(license license:expat)))
(define-public python-phonenumbers
(package
(name "python-phonenumbers")
(version "8.13.37")
(source
(origin
(method url-fetch)
(uri (pypi-uri "phonenumbers" version))
(sha256
(base32
"1whw3p0p90x1iyw5cqf2pval90zy20c26ry3ywb0bsls2pnmycdx"))))
(build-system python-build-system)
(home-page
"https://github.com/daviddrysdale/python-phonenumbers")
(synopsis
"Python library for dealing with international phone numbers")
(description
"This package provides a Python port of Google's libphonenumber library.")
(license license:asl2.0)))
(define-public python-heapdict
(package
(name "python-heapdict")
(version "1.0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "HeapDict" version))
(sha256
(base32
"1dnd7v9adqd21bf4ih2wzn9a7b41m0nccb0vbxny9n037rxzb5c4"))))
(build-system python-build-system)
(home-page "http://stutzbachenterprises.com/")
(synopsis "Heap with decrease-key and increase-key operations")
(description
"heapdict implements the MutableMapping ABC, meaning it works pretty much
like a regular Python @code{dict}. It’s designed to be used as a priority
queue.")
(license license:bsd-3)))
(define-public python-zict
(package
(name "python-zict")
(version "3.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "zict" version))
(sha256
(base32
"19gvr41xi5fazkzkg33kwrk70sv50hygng0cg70ayym9nriy48g3"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
;; This uses "importorskip", but it won't skip.
'(list "--ignore=tests/test_lmdb.py")))
(propagated-inputs
(list python-heapdict))
(native-inputs
(list python-pytest
python-pytest-asyncio
python-pytest-repeat
python-pytest-timeout))
(home-page "https://zict.readthedocs.io/en/latest/")
(synopsis "Composable mutable mapping tools")
(description "This package provides abstract @code{MutableMapping} classes
that consume and build on other @code{MutableMappings}. Several of these can
be composed with one another to form intuitive interfaces over complex storage
systems policies.")
(license license:bsd-3)))
(define-public python-send2trash
(package
(name "python-send2trash")
(version "1.8.0")
(source
(origin (method git-fetch)
;; Source tarball on PyPI doesn't include tests.
(uri (git-reference
(url "https://github.com/arsenetar/send2trash")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"1k7dfypaaq4f36fbciaasv72j6wgjihw8d88axmz9c329bz8v5qx"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(add-before 'check 'pre-check
(lambda _
(setenv "HOME" "/tmp")))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv")))))))
(native-inputs (list python-pytest))
(home-page "https://github.com/arsenetar/send2trash")
(synopsis "Send files to the user's @file{~/Trash} directory")
(description "This package provides a Python library to send files to the
user's @file{~/Trash} directory.")
(license license:bsd-3)))
(define-public python-pyfavicon
(package
(name "python-pyfavicon")
(version "0.1.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pyfavicon" version))
(sha256
(base32 "15wfpa99hvcfsv8j0m8iprmydi2p4qkhm86qfx485244y0ia5mgx"))))
(build-system python-build-system)
(arguments
;; There are no tests in the PyPI tarball and the tests from the
;; repository require online data.
'(#:tests? #f))
(propagated-inputs
(list python-aiohttp python-beautifulsoup4 python-pillow))
(home-page "https://github.com/bilelmoussaoui/pyfavicon")
(synopsis "Async favicon fetcher")
(description
"@code{pyfavicon} is an async favicon fetcher.")
(license license:expat)))
(define-public python-yamllint
(package
(name "python-yamllint")
(version "1.31.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "yamllint" version))
(sha256
(base32 "0rbs7xq7y7bp3k75z7jamrdrrfyp95hifsz0hwm1cgkk5z8z30rd"))))
(build-system python-build-system)
(propagated-inputs
(list python-pathspec python-pyyaml python-setuptools))
(home-page "https://github.com/adrienverge/yamllint")
(synopsis "Linter for YAML files")
(description
"Yamllint is a linter for YAML files. yamllint does not only check for
syntax validity, but for weirdnesses like key repetition and cosmetic problems
such as lines length, trailing spaces, indentation, etc.")
(license license:gpl3+)))
(define-public python-yapf
(package
(name "python-yapf")
(version "0.32.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "yapf" version))
(sha256
(base32
"06vxqski7qss2h2iy4fd04czym0cwjrzkaab9h03wzpg6xfhixd3"))))
(build-system pyproject-build-system)
(propagated-inputs
(list python-importlib-metadata python-platformdirs python-tomli))
(native-inputs
(list python-pytest))
(home-page "https://github.com/google/yapf")
(synopsis "Formatter for Python code")
(description "YAPF is a formatter for Python code. It's based off of
@dfn{clang-format}, developed by Daniel Jasper. In essence, the algorithm
takes the code and reformats it to the best formatting that conforms to the
style guide, even if the original code didn't violate the style guide.")
(license license:asl2.0)))
(define-public python-yq
(package
(name "python-yq")
(version "3.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "yq" version))
(sha256
(base32
"1wklgs3d9si475nffw9agq5kgk8bdicbsmlj4sx4kiw64ji4ma1h"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch
(lambda* (#:key inputs #:allow-other-keys)
(substitute* "yq/__init__.py"
(("Popen\\(\\[\"jq")
(string-append
"Popen([\""
(assoc-ref inputs "jq")
"/bin/jq")))
#t)))))
(inputs
(list python-argcomplete python-pyyaml python-xmltodict python-toml jq))
(native-inputs
(list python-coverage python-flake8 python-setuptools-scm python-wheel))
(home-page "https://github.com/kislyuk/yq")
(synopsis "Command-line YAML/XML processor")
(description
"This package provides @command{yq} and @command{xq} for processing YAML
and XML respectively. The processing is done through @command{jq}, @command{jq}
filters can be used to process the data as it passes through.")
(license license:asl2.0)))
(define-public python-gyp
(let ((commit "9d09418933ea2f75cc416e5ce38d15f62acd5c9a")
(revision "1"))
(package
(name "python-gyp")
;; Google does not release versions,
;; based on second most recent commit date.
(version (git-version "0.0.0" revision commit))
(source
(origin
;; Google does not release tarballs,
;; git checkout is needed.
(method git-fetch)
(uri (git-reference
(url "https://chromium.googlesource.com/external/gyp")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"0ay99rc5msqjpjl7fy1l69f8mvn08wnh2pgr08ijdih9z88xaa5x"))))
(build-system python-build-system)
(propagated-inputs (list python-six))
(home-page "https://gyp.gsrc.io/")
(synopsis "GYP is a Meta-Build system")
(description
"GYP builds build systems for large, cross platform applications.
It can be used to generate XCode projects, Visual Studio projects, Ninja build
files, and Makefiles.")
(license license:bsd-3))))
(define-public python-whatever
(package
(name "python-whatever")
(version "0.6")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/Suor/whatever")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "1q7ajgqjfivxqsqgnhp4lc4p6jxyh4zprcsdbpd6dw54inaf0av5"))))
(build-system pyproject-build-system)
(native-inputs
(list python-pytest))
(home-page "https://github.com/Suor/whatever")
(synopsis "Make anonymous functions by partial application of operators")
(description "@code{whatever} provides an easy way to make anonymous
functions by partial application of operators.")
(license license:bsd-3)))
(define-public python-funcy
(package
(name "python-funcy")
(version "1.11")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/Suor/funcy")
(commit version)))
(sha256
(base32 "1s98vkjnq3zq71737hn8xa15kssvmy1sfzsll3vrlv53902418mw"))
(file-name (git-file-name name version))))
(build-system pyproject-build-system)
(native-inputs
(list python-pytest python-whatever))
(home-page "https://github.com/Suor/funcy")
(synopsis "Functional tools")
(description "@code{funcy} is a library that provides functional tools.
Examples are:
@enumerate
@item merge - Merges collections of the same type
@item walk - Type-preserving map
@item select - Selects a part of a collection
@item take - Takes the first n items of a collection
@item first - Takes the first item of a collection
@item remove - Predicated-removes items of a collection
@item concat - Concatenates two collections
@item flatten - Flattens a collection with subcollections
@item distinct - Returns only distinct items
@item split - Predicated-splits a collection
@item split_at - Splits a collection at a given item
@item group_by - Groups items by group
@item pairwise - Pairs off adjacent items
@item partial - Partially-applies a function
@item curry - Curries a function
@item compose - Composes functions
@item complement - Complements a predicate
@item all_fn - \"all\" with predicate
@end enumerate")
(license license:bsd-3)))
(define-public python-isoweek
(package
(name "python-isoweek")
(version "1.3.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "isoweek" version))
(sha256
(base32
"1s7zsf0pab0l9gn6456qadnz5i5h90hafcjwnhx5mq23qjxggwvk"))))
(build-system python-build-system)
(home-page "https://github.com/gisle/isoweek")
(synopsis "Objects representing a week")
(description "The @code{isoweek} module provide the class Week that
implements the week definition of ISO 8601. This standard also defines
a notation for identifying weeks; yyyyWww (where the W is a literal).
Week instances stringify to this form.")
(license license:bsd-3)))
(define-public python-pyzbar
(package
(name "python-pyzbar")
(version "0.1.8")
(source
(origin
;; There's no source tarball on PyPI.
(method git-fetch)
(uri (git-reference
(url "https://github.com/NaturalHistoryMuseum/pyzbar")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1fqlfg5p2v9lzzzi0si2sz54lblprk6jjjhjw54b64lp58c1yhsl"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'remove-failing-test
(lambda _
;; This tests if find_library was called once, but we remove
;; the call in the stage below to make the library find libzbar.
(delete-file "pyzbar/tests/test_zbar_library.py")
#t))
(add-before 'build 'set-library-file-name
(lambda* (#:key inputs #:allow-other-keys)
(let ((libzbar (assoc-ref inputs "zbar")))
(substitute* "pyzbar/zbar_library.py"
(("find_library\\('zbar'\\)")
(string-append "'" libzbar "/lib/libzbar.so.0'")))
#t))))))
(native-inputs
(list pkg-config python-numpy python-pillow))
(inputs
(list zbar))
(home-page "https://github.com/NaturalHistoryMuseum/pyzbar/")
(synopsis "Read one-dimensional barcodes and QR codes")
(description
"Read one-dimensional barcodes and QR codes using the zbar library.
Features:
@itemize
@item Pure python
@item Works with PIL / Pillow images, OpenCV / numpy ndarrays, and raw bytes
@item Decodes locations of barcodes
@item No dependencies, other than the zbar library itself
@end itemize")
(license license:expat)))
(define-public python-tokenize-rt
(package
(name "python-tokenize-rt")
(version "2.0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "tokenize-rt" version))
(sha256
(base32
"1yjvbz7rvrz31zjyax1cgy3xhf4wb3j18jwnj4bnl77ca4gliyiw"))))
(build-system python-build-system)
(home-page "https://github.com/asottile/tokenize-rt")
(synopsis "Wrapper around the stdlib tokenize which roundtrips")
(description
"This Python library is a wrapper around @code{tokenize} from the Python
standard library. It provides two additional tokens @code{ESCAPED_NL} and
@code{UNIMPORTANT_WS}, and a @code{Token} data type. Use @code{src_to_tokens}
and @code{tokens_to_src} to roundtrip.")
(license license:expat)))
(define-public python-towncrier
(package
(name "python-towncrier")
(version "23.6.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "towncrier" version))
(sha256
(base32
"1hbhzxcn30qlnab1rnk2bf09jfy5bpxzfdp6zfn8sz3jnidbsagw"))))
(build-system pyproject-build-system)
(arguments
(list #:test-flags
;; TODO: Why is this failing?
#~'("-k" "not test_version")))
(propagated-inputs
(list python-click
python-click-default-group
python-incremental
python-jinja2
python-tomli))
(native-inputs
(list git-minimal/pinned ;tests create git repositories
python-hatchling
python-packaging
python-pytest
python-twisted))
(home-page "https://towncrier.readthedocs.io/en/stable/")
(synopsis "Manage release notes")
(description
"@code{towncrier} is a utility to produce useful, summarized news
files (also known as changelogs) for a project.")
(license license:expat)))
(define-public python-future-fstrings
(package
(name "python-future-fstrings")
(version "0.4.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "future_fstrings" version))
(sha256
(base32
"0ydxqz2dvns44g55p8ix2x18qkfk3aaz0m0dc70f3g6n8js35h47"))))
(build-system python-build-system)
(propagated-inputs
(list python-tokenize-rt))
(home-page "https://github.com/asottile/future-fstrings")
(synopsis "Backport of fstrings to Python < 3.6")
(description
"This package provides a UTF-8 compatible encoding
@code{future_fstrings}, which performs source manipulation. It decodes the
source bytes using the UTF-8 encoding and then rewrites Python 3.6 style
@code{f} strings.")
(license license:expat)))
;; TODO: https://github.com/python/typed_ast/issues/179
(define-public python-typed-ast
(package
(name "python-typed-ast")
(version "1.5.1")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/python/typed_ast")
(commit version)))
(sha256
(base32 "1xfcs5246c8v5600aaa8zs7ii4sxb62q6r3sb2fgazyjx97wrxd9"))
(file-name (git-file-name name version))))
(build-system python-build-system)
(arguments
(list #:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv")))))))
(native-inputs (list python-pytest))
(home-page "https://github.com/python/typed_ast")
(synopsis "Fork of Python @code{ast} modules with type comment support")
(description "This package provides a parser similar to the standard
@code{ast} library. Unlike @code{ast}, the parsers in @code{typed_ast}
include PEP 484 type comments and are independent of the version of Python
under which they are run. The @code{typed_ast} parsers produce the standard
Python AST (plus type comments), and are both fast and correct, as they are
based on the CPython 2.7 and 3.7 parsers.")
;; See the file "LICENSE" for the details.
(license (list license:psfl
license:asl2.0
license:expat)))) ;ast27/Parser/spark.py
(define-public python-typer
(package
(name "python-typer")
(version "0.6.1")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/tiangolo/typer")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "1knv353qhkl2imav3jfp6bgq47m8wkkqhq1dzmqg2sv8rsy7zgl7"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
'(let ((disabled-tests (list "test_show_completion"
"test_install_completion")))
(list "-k" (string-append "not "
(string-join disabled-tests
" and not "))))
#:phases
#~(modify-phases %standard-phases
;; Unfortunately, this doesn't seem to be enough to fix these two
;; tests, but we'll patch this anyway.
(add-after 'unpack 'patch-shell-reference
(lambda _
(substitute* "tests/test_completion/test_completion.py"
(("\"bash\"") (string-append "\"" (which "bash") "\""))
(("\"/bin/bash\"")
(string-append "\"" (which "bash") "\"")))))
(add-before 'check 'pre-check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(setenv "HOME" "/tmp") ; some tests need it
;; This is for completion tests
(with-output-to-file "/tmp/.bashrc"
(lambda _ (display "# dummy")))))))))
(propagated-inputs
(list python-click))
(native-inputs
(list python-coverage python-flit python-pytest python-rich
python-shellingham))
(home-page "https://github.com/tiangolo/typer")
(synopsis "Typer builds CLI based on Python type hints")
(description
"Typer is a library for building CLI applications. It's based on Python
3.6+ type hints.")
;; MIT license
(license license:expat)))
(define-public python-typeguard
(package
(name "python-typeguard")
(version "2.13.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "typeguard" version))
(sha256
(base32 "1i5qzcyw2715h1g1hvj7fxykck2bkxyshpngjr3nfcx1lf6smv80"))
(patches (search-patches "python-typeguard-python3.10.patch"))))
(build-system python-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv" "-k"
;; XXX: These fail when installed as a library:
;; https://github.com/agronholm/typeguard/issues/176
"not usefixtures and not test_cached_module")))))))
(native-inputs (list python-mypy
python-pytest
python-setuptools-scm
python-typing-extensions))
(home-page "https://github.com/agronholm/typeguard")
(synopsis "Run-time type checker for Python")
(description
"@code{typeguard} provides run-time type checking for functions defined
with PEP 484 argument (and return) type annotations.")
(license license:expat)))
(define-public python-typeguard-4
(package
(inherit python-typeguard)
(name "python-typeguard")
;; This is the latest version we can use, because python-typeguard >=
;; 4.0.1 requires python-typing-extensions >= 4.7.0.
(version "4.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "typeguard" version))
(sha256
(base32 "11yrc7pv2fajmicwiyc92sb5gphlw3zbxww8f2prrsh6rgdv6kqr"))))
(build-system pyproject-build-system)
(arguments
'())
(propagated-inputs (list python-typing-extensions))))
(define-public bpython
(package
(name "bpython")
(version "0.24")
(source
(origin
(method url-fetch)
(uri (pypi-uri "bpython" version))
(sha256
(base32 "1g9xzl49skghd9q2a8b71gg1n97lfnj9in2kzcmzsj4cgbynywwq"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'remove-failing-test
(lambda _
;; Remove failing test. FIXME: make it pass
(delete-file "bpython/test/test_args.py")
#t))
(add-after 'wrap 'add-aliases
;; for symmetry to bpython2, add symlinks bypthon3, bpdb3, etc.
(lambda* (#:key outputs #:allow-other-keys)
(let ((out (assoc-ref outputs "out")))
(for-each
(lambda (old new)
(symlink old (string-append out "/bin/" new)))
'("bpython" "bpython-curses" "bpython-urwid" "bpdb")
'("bpython3" "bpython3-curses" "bpython3-urwid" "bpdb3")))
#t)))))
(propagated-inputs
(list python-pygments
python-requests
python-curtsies
python-greenlet
python-cwcwidth
python-pyxdg
;; optional dependencies
python-urwid ; for bpython-urwid only
python-watchdog
python-jedi))
(native-inputs
(list python-sphinx python-mock python-tox python-wheel))
(home-page "https://bpython-interpreter.org/")
(synopsis "Fancy interface to the Python interpreter")
(description "Bpython is a fancy interface to the Python
interpreter. bpython's main features are
@enumerate
@item in-line syntax highlighting,
@item readline-like autocomplete with suggestions displayed as you type,
@item expected parameter list for any Python function,
@item \"rewind\" function to pop the last line of code from memory and
re-evaluate,
@item send the code you've entered off to a pastebin,
@item save the code you've entered to a file, and
@item auto-indentation.
@end enumerate")
(license license:expat)))
(define-public python-pyinotify
(package
(name "python-pyinotify")
(version "0.9.6")
(source (origin
(method url-fetch)
(uri (pypi-uri "pyinotify" version))
(sha256
(base32
"1x3i9wmzw33fpkis203alygfnrkcmq9w1aydcm887jh6frfqm6cw"))))
(build-system python-build-system)
(arguments `(#:tests? #f)) ;no tests
(home-page "https://github.com/seb-m/pyinotify")
(synopsis "Python library for monitoring inotify events")
(description
"@code{pyinotify} provides a Python interface for monitoring
file system events on Linux.")
(license license:expat)))
(define-public python-more-itertools
(package
(name "python-more-itertools")
(version "8.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "more-itertools" version))
(sha256
(base32
"01x5nwm1zxmnd06cllbdd095xxc2nd25ing1a726m2kd30rbkpdi"))))
(build-system python-build-system)
(home-page "https://github.com/erikrose/more-itertools")
(synopsis "More routines for operating on iterables, beyond itertools")
(description "Python's built-in @code{itertools} module implements a
number of iterator building blocks inspired by constructs from APL, Haskell,
and SML. @code{more-itertools} includes additional building blocks for
working with iterables.")
(license license:expat)))
;; Needed for python-yt, older version fails with exception: E ImportError:
;; cannot import name 'mark_ends' from 'more_itertools'
;; (<...>more_itertools/__init__.py)
(define-public python-more-itertools-next
(package
(inherit python-more-itertools)
(name "python-more-itertools")
(version "10.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "more-itertools" version))
(sha256
(base32
"1q9rq9g026m4wl6ki2q8pw7xbc02vl34qqw702h9jgixqj0b9k4g"))
(snippet
;; distutils.errors.DistutilsOptionError: No configuration found for
;; dynamic 'description'. Some dynamic fields need to be specified via
;; `tool.setuptools.dynamic`others must be specified via the equivalent
;; attribute in `setup.py`.
'(delete-file "setup.py"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "python" "-m" "unittest")))))))
(native-inputs
(list python-flit-core))
(propagated-inputs
(list python-six))))
(define-public python-latexcodec
(package
(name "python-latexcodec")
(version "2.0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "latexcodec" version))
(sha256
(base32 "16pynfnn8y8xp55yp06i721fccv5dlx9ba6k5bzcwq9j6wf5b8ia"))))
(build-system python-build-system)
(propagated-inputs
(list python-six))
(home-page "https://readthedocs.org/projects/latexcodec/")
(synopsis "Work with LaTeX code in Python")
(description "Lexer and codec to work with LaTeX code in Python.")
(license license:expat)))
(define-public python-pybloom-live
(package
(name "python-pybloom-live")
(version "4.0.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "pybloom_live" version))
(sha256
(base32
"040i6bjqvl33j30v865shsk30s3h7f16pqwiaj5kig857dfmqm4r"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-bitarray python-xxhash))
(native-inputs (list python-pytest))
(home-page "https://github.com/joseph-fox/python-bloomfilter")
(synopsis "Bloom filter")
(description "This package provides a scalable Bloom filter implemented in
Python.")
(license license:expat)))
(define-public python-pybtex
(package
(name "python-pybtex")
(version "0.24.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pybtex" version))
(sha256
(base32 "0ma7sc10hk6caq5zghbk865vrlaynz7x5z630z0facqpnqssx3l1"))))
(build-system python-build-system)
(native-inputs
(list python-pytest))
(propagated-inputs
(list python-latexcodec python-pyyaml python-six))
(arguments
(list
#:phases #~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest")))))))
(home-page "https://pybtex.org/")
(synopsis "BibTeX-compatible bibliography processor")
(description "Pybtex is a BibTeX-compatible bibliography processor written
in Python. You can simply type pybtex instead of bibtex.")
(license license:expat)))
(define-public python-onetimepass
(package
(name "python-onetimepass")
(version "1.0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "onetimepass" version))
(sha256
(base32 "09vagxgbq78wvq4xbikmn2hpqqsa2i96kqsmphf7dqynfv0dlsd5"))))
(build-system python-build-system)
(propagated-inputs (list python-six))
(home-page "https://github.com/tadeck/onetimepass/")
(synopsis "One-time password library")
(description "Python one-time password library for HMAC-based (HOTP) and
time-based (TOTP) passwords.")
(license license:expat)))
(define-public python-online-judge-api-client
(package
(name "python-online-judge-api-client")
(version "10.10.1")
;; Source distributions are not uploaded to PyPI.
;; https://pypi.org/project/online-judge-api-client/10.10.1/#files
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/online-judge-tools/api-client")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0yjqhh44va5nawd9rpqcjyf0g7rjlkvn7s90fmwmwjyqvy6lhjiz"))
(patches (search-patches
"python-online-judge-api-client-tests.patch"))))
(build-system python-build-system)
(arguments
(list #:phases #~(modify-phases %standard-phases
;; These tests require network connections
(add-after 'unpack 'remove-failing-test
(lambda _
(for-each delete-file
'("tests/get_contest_atcoder.py"
"tests/get_contest_atcoder_problems.py"
"tests/get_contest_codechef.py"
"tests/get_contest_codeforces.py"
"tests/get_contest_yukicoder.py"
"tests/get_problem_anarchygolf.py"
"tests/get_problem_aoj.py"
"tests/get_problem_atcoder.py"
"tests/get_problem_codechef.py"
"tests/get_problem_codeforces.py"
"tests/get_problem_csacademy.py"
"tests/get_problem_facebook.py"
"tests/get_problem_hackerrank.py"
"tests/get_problem_kattis.py"
"tests/get_problem_library_checker.py"
"tests/get_problem_poj.py"
"tests/get_problem_topcoder.py"
"tests/get_problem_toph.py"
"tests/get_problem_yukicoder.py"
"tests/login_service.py")) #t)))))
(propagated-inputs (list python-appdirs
python-beautifulsoup4
python-colorlog
python-lxml
python-requests
python-toml
python-jsonschema))
(home-page "https://github.com/online-judge-tools/api-client")
(synopsis "API client for various online judges")
(description
"This is an API client for various online judges, used as the backend
library of @code{oj} command. You can use the Python
library (@code{onlinejudge} module) and the command-line
interface (@command{oj-api} command) which talks JSON compatible with
jmerle/competitive-companion.")
(license license:expat)))
(define-public online-judge-tools
(package
(name "online-judge-tools")
(version "11.5.1")
;; Source distributions are not uploaded to PyPI.
;; https://pypi.org/project/online-judge-tools/11.5.1/#files
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/online-judge-tools/oj")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0zkzmmjgjb6lyrzq1ip54cpnp7al9a7mcyjyi5vx58bvnx3q0c6m"))
(patches (search-patches "online-judge-tools.patch"))))
(build-system python-build-system)
(arguments
(list #:phases #~(modify-phases %standard-phases
;; These tests require network connections
(add-after 'unpack 'remove-failing-test
(lambda _
(delete-file "tests/command_version.py") #t)))))
(inputs (list time))
(propagated-inputs (list python-online-judge-api-client python-colorama
python-requests))
(home-page "https://github.com/online-judge-tools/oj")
(synopsis "Command to help solving problems on various online judges")
(description
"@command{oj} is a command line tool to help solving problems on
various online judges. This command automates downloading sample
cases, generating additional test cases, testing for your code, and
submitting it.")
(license license:expat)))
(define-public python-mpv-jsonipc
(package
(name "python-mpv-jsonipc")
(version "1.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "python-mpv-jsonipc" version))
(sha256
(base32 "0ymdwrx544a6gn6wm9dixpgzbfrbpxvcj5ys7m41cgb4lvpvx691"))))
(build-system pyproject-build-system)
(home-page "https://github.com/iwalton3/python-mpv-jsonipc")
(synopsis "Python API to control MPV using JSON IPC")
(description "Python MPV JSONIPC implements an interface similar to
python-mpv, but it uses the JSON IPC protocol instead of the C API.")
(license license:asl2.0)))
(define-public python-jellyfin-apiclient
(package
(name "python-jellyfin-apiclient")
(version "1.9.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "jellyfin-apiclient-python" version))
(sha256
(base32 "0r67cp9nizvn3cbslgi30zpd3mw4a6zal0ygik3jv5lni1xdkk5w"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-certifi python-requests python-urllib3
python-websocket-client))
(home-page "https://github.com/jellyfin/jellyfin-apiclient-python")
(synopsis "Python API client for Jellyfin")
(description "The Jellyfin ApiClient Python package makes it possible
to use the Jellyfin API from Python. It was extracted from the Jellyfin
Kodi plugin.")
(license license:gpl3+)))
(define-public python-parso
(package
(name "python-parso")
(version "0.8.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "parso" version))
(sha256
(base32 "185gkxq92kqiw2h5zp1cmyn04055x0lix4hmi5c077xm1clvw1wc"))
(patches
(search-patches "python-parso-unit-tests-in-3.10.patch"))))
(native-inputs
(list python-pytest))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv")))))))
(home-page "https://github.com/davidhalter/parso")
(synopsis "Python Parser")
(description "Parso is a Python parser that supports error recovery and
round-trip parsing for different Python versions (in multiple Python versions).
Parso is also able to list multiple syntax errors in your Python file.")
(license license:expat)))
(define-public python-async-generator
(package
(name "python-async-generator")
(version "1.10")
(source
(origin
(method url-fetch)
(uri (pypi-uri "async_generator" version))
(sha256
(base32
"0i11f6z6lix8ixi3vsk6s76zvvpmgrw6zjrcwjm0m4hjdh83vfvf"))))
(build-system python-build-system)
(native-inputs
(list python-pytest))
(home-page "https://github.com/python-trio/async_generator")
(synopsis "Async generators and context managers for Python 3.5+")
(description "@code{async_generator} back-ports Python 3.6's native async
generators and Python 3.7's context managers into Python 3.5.")
;; Dual licensed.
(license (list license:expat license:asl2.0))))
(define-public python-async-timeout
(package
(name "python-async-timeout")
(version "4.0.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "async-timeout" version))
(sha256
(base32
"05bbjz16n1a7m1s3lmcwri2x5rc7hnh6f2hdr2lbflnv1mjf2qr1"))))
(build-system python-build-system)
(home-page "https://github.com/aio-libs/async-timeout")
(synopsis "Timeout context manager for asyncio programs")
(description "@code{async-timeout} provides a timeout timeout context
manager compatible with @code{asyncio}.")
(license license:asl2.0)))
(define-public python-glob2
(package
(name "python-glob2")
(version "0.7")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/miracle2k/python-glob2")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "160nh2ay9lw2hi0rixpzb2k87r6ql56k0j2cm87lqz8xc8zbw919"))))
(build-system python-build-system)
(home-page "https://github.com/miracle2k/python-glob2/")
(synopsis "Extended Version of the python buildin glob module")
(description "This is an extended version of the Python
@url{http://docs.python.org/library/glob.html, built-in glob module} which
adds:
@itemize
@item The ability to capture the text matched by glob patterns, and return
those matches alongside the file names.
@item A recursive @code{**} globbing syntax, akin for example to the
@code{globstar} option of Bash.
@item The ability to replace the file system functions used, in order to glob
on virtual file systems.
@item Compatible with Python 2 and Python 3 (tested with 3.3).
@end itemize
Glob2 currently based on the glob code from Python 3.3.1.")
(license license:bsd-2)))
(define-public python-gipc
(package
(name "python-gipc")
(version "0.6.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "gipc" version ".zip"))
(sha256
(base32
"0pd9by719qh882hqs6xpby61sn1x5h98hms5p2p8yqnycrf1s0h2"))))
(build-system python-build-system)
(native-inputs
(list unzip))
(propagated-inputs
(list python-gevent))
(home-page "https://gehrcke.de/gipc/")
(synopsis "Child process management in the context of gevent")
(description "Usage of Python's multiprocessing package in a
gevent-powered application may raise problems. With @code{gipc},
process-based child processes can safely be created anywhere within a
gevent-powered application.")
(license license:expat)))
(define-public python-beautifultable
(package
(name "python-beautifultable")
(version "1.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "beautifultable" version))
(sha256
(base32
"0wwlbifcbpzy3wfv6yzsxncarsngzizmmxbn6cy5gazlcq7h4k5x"))))
(build-system python-build-system)
(propagated-inputs
(list python-wcwidth))
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch-setup.py
(lambda _
(substitute* "setup.py"
(("setup\\(")
"setup(\n test_suite=\"test\",")))))))
(home-page "https://github.com/pri22296/beautifultable")
(synopsis "Print ASCII tables for terminals")
(description "@code{python-beautifultable} provides a class for easily
printing tabular data in a visually appealing ASCII format to a terminal.
Features include, but are not limited to:
@itemize
@item Full customization of the look and feel of the table
@item Row and column accessors.
@item Full support for colors using ANSI sequences or any library.
@item Plenty of predefined styles and option to create custom ones.
@item Support for Unicode characters.
@item Supports streaming table when data is slow to retrieve.
@end itemize")
(license license:expat)))
(define-public python-globber
(package
(name "python-globber")
(version "0.2.1")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/asharov/globber")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"055xf7ja7zjhxis0ab5fnfsx16fsvr5fvc6mixqybanwxh8sgfjk"))))
(build-system python-build-system)
(home-page "https://github.com/asharov/globber")
(synopsis "Library for string matching with glob patterns")
(description
"Globber is a Python library for matching file names against glob patterns.
In contrast to other glob-matching libraries, it matches arbitrary strings and
doesn't require the matched names to be existing files. In addition, it
supports the globstar @code{**} operator to match an arbitrary number of
path components.")
(license license:asl2.0)))
(define-public python-git-hammer
(package
(name "python-git-hammer")
(version "0.3.1")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/asharov/git-hammer")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"0f9xlk86ijzpdj25hr1q4wcy8k72v3w470ngwm9mpdkfj8ng84wr"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch-setup.py
(lambda _
(substitute* "setup.py"
(("setup\\(")
"setup(\n test_suite=\"test\",")))))))
(propagated-inputs
(list python-beautifultable
python-dateutil
python-gitpython
python-globber
python-matplotlib
python-sqlalchemy
python-sqlalchemy-utils))
(home-page "https://github.com/asharov/git-hammer")
(synopsis "Provide statistics for git repositories")
(description
"Git Hammer is a statistics tool for projects in git repositories.
Its major feature is tracking the number of lines authored by each person for every
commit, but it also includes some other useful statistics.")
(license license:asl2.0)))
(define-public python-fusepy
(package
(name "python-fusepy")
(version "2.0.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "fusepy" version))
(sha256
(base32
"0v5grm4zyf58hsplwsxfbihddw95lz9w8cy3rpzbyha287swgx8h"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'build 'set-library-file-name
(lambda* (#:key inputs #:allow-other-keys)
(let ((fuse (assoc-ref inputs "fuse")))
(substitute* "fuse.py"
(("find_library\\('fuse'\\)")
(string-append "'" fuse "/lib/libfuse.so'")))))))))
(propagated-inputs
(list fuse-2))
(home-page "https://github.com/fusepy/fusepy")
(synopsis "Simple ctypes bindings for FUSE")
(description "Python module that provides a simple interface to FUSE and
MacFUSE. The binding is created using the standard @code{ctypes} library.")
(license license:isc)))
(define-public python-fusepyng
(package
(name "python-fusepyng")
(version "1.0.7")
(source
(origin
(method url-fetch)
(uri (pypi-uri "fusepyng" version))
(sha256
(base32
"17w9iw6m6zjbmnhs4ikd27pq4mb1nan6k4ahlwyz40463vw6wkwb"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'set-libfuse-path
(lambda* (#:key inputs #:allow-other-keys)
(let ((fuse (assoc-ref inputs "fuse")))
(substitute* "fusepyng.py"
(("os.environ.get\\('FUSE_LIBRARY_PATH'\\)")
(string-append "\"" fuse "/lib/libfuse.so\"")))))))))
(inputs
(list fuse-2))
(propagated-inputs
(list python-paramiko))
(home-page "https://github.com/rianhunter/fusepyng")
(synopsis "Simple ctypes bindings for FUSE")
(description "@code{fusepyng} is a Python module that provides a simple
interface to FUSE on various operating systems. It's just one file and is
implemented using @code{ctypes}.")
(license license:isc)))
(define-public python-update-checker
(package
(name "python-update-checker")
(version "0.18.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "update-checker" version))
(sha256
(base32 "04yb5a9mi45ax50m2m0ih6gdvkk1j7gfmy83dd58i1f59axlabba"))))
(build-system python-build-system)
(propagated-inputs (list python-requests))
(native-inputs (list python-black python-flake8 python-pytest))
(home-page "https://github.com/bboe/update_checker")
(synopsis "Python module that will check for package updates")
(description "This package provides a Python module that will check for
package updates.")
(license license:bsd-2)))
(define-public python-userspacefs
(package
(name "python-userspacefs")
(version "2.0.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "userspacefs" version))
(sha256
(base32
"0v0qkdwfc61s2yiq7d7amin93x5biypfmi9pfhf8yj1rdpx5yvsx"))))
(build-system python-build-system)
(propagated-inputs
(list python-fusepyng))
(home-page "https://github.com/rianhunter/userspacefs")
(synopsis "User-space file systems for Python")
(description
"@code{userspacefs} is a library that allows you to easily write
user-space file systems in Python.")
(license license:gpl3+)))
(define-public python-stone
(package
(name "python-stone")
(version "3.2.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "stone" version))
(sha256
(base32
"0xby5mpsms7b2rv8j6mvxzmzz5i9ii01brb9ylxz6kiv2i08piwv"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'change-version-requirements
(lambda _
;; Match the requirement in test/requirements.txt
(substitute* "setup.py"
(("pytest < 5") "pytest < 7"))
;; We don't care about a coverage report.
(substitute* "test/requirements.txt"
(("coverage.*") "coverage\n"))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
;; These tests don't import currectly.
(delete-file "test/test_js_client.py")
(delete-file "test/test_tsd_types.py")
(delete-file "test/test_python_gen.py")
(invoke "pytest")))))))
(propagated-inputs
(list python-ply python-six))
(native-inputs
(list python-coverage python-mock python-pytest python-pytest-runner))
(home-page "https://github.com/dropbox/stone")
(synopsis "Official Api Spec Language for Dropbox")
(description
"Stone is an interface description language (IDL) for APIs.")
(license license:expat)))
(define-public pybind11
(package
(name "pybind11")
(version "2.8.1")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/pybind/pybind11")
(commit (string-append "v" version))))
(sha256
(base32
"10hrkrh78sk7k0ydw1ghmp7gvpwmkby0l2s0kf2iaj9sz0vijkhs"))
(file-name (git-file-name name version))))
(build-system cmake-build-system)
(native-inputs
`(("python" ,python-wrapper)
;; The following dependencies are used for tests.
("python-pytest" ,python-pytest)
("catch" ,catch2-1)
("eigen" ,eigen)))
(arguments
`(#:configure-flags
(list (string-append "-DCATCH_INCLUDE_DIR="
(assoc-ref %build-inputs "catch")
"/include/catch"))
#:phases (modify-phases %standard-phases
(add-after 'install 'install-python
(lambda* (#:key outputs #:allow-other-keys)
(let ((out (assoc-ref outputs "out")))
(with-directory-excursion "../source"
(setenv "PYBIND11_USE_CMAKE" "yes")
(invoke "python" "setup.py" "install"
"--single-version-externally-managed"
"--root=/"
(string-append "--prefix=" out)))))))
#:test-target "check"))
(home-page "https://github.com/pybind/pybind11/")
(synopsis "Seamless operability between C++11 and Python")
(description
"@code{pybind11} is a lightweight header-only library that exposes C++
types in Python and vice versa, mainly to create Python bindings of existing
C++ code. Its goals and syntax are similar to the @code{Boost.Python}
library: to minimize boilerplate code in traditional extension modules by
inferring type information using compile-time introspection.")
(license license:bsd-3)))
;; Needed for scipy
(define-public pybind11-2.10
(package
(inherit pybind11)
(name "pybind11")
(version "2.10.4")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/pybind/pybind11")
(commit (string-append "v" version))))
(sha256
(base32
"0rbcfvl7y472sykzdq3vrkw83kar0lpzhk3wq9yj9cdydl8cpfcz"))
(file-name (git-file-name name version))))))
;; This is needed for python-vaex-core.
(define-public pybind11-2.3
(package
(inherit pybind11)
(name "pybind11")
(version "2.3.0")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/pybind/pybind11")
(commit (string-append "v" version))))
(sha256
(base32
"11b6dniri8m05spfd2a19irz82shf4sdca73566bniggrf3zclnf"))
(file-name (git-file-name name version))))
(arguments
(substitute-keyword-arguments (package-arguments pybind11)
((#:tests? tests? #false)
#false)))))
(define-public python-pooch
(package
(name "python-pooch")
(version "1.8.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pooch" version))
(sha256
(base32 "0w32fhfp67k0ip0gxjpw8kxdx9ghybxmqkv9sbwy99nrgl4n7vr7"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
'(list "-k"
(string-append
;; We don't have the test archives
"not test_decompress"
" and not test_multiple_unpacking"
" and not test_unpack_members_with_leading_dot"
" and not test_unpacking"
" and not test_unpacking_members_then_no_members"
" and not test_unpacking_wrong_members_then_no_members"
;; These all require access to the internet
" and not test_check_availability"
" and not test_check_availability_invalid_downloader"
" and not test_check_availability_on_ftp"
" and not test_create_and_fetch"
" and not test_downloader_arbitrary_progressbar"
" and not test_fetch_with_downloader"
" and not test_figshare_data_repository_versions"
" and not test_load_registry_from_doi"
" and not test_pooch_corrupted"
" and not test_pooch_custom_url"
" and not test_pooch_download"
" and not test_pooch_download_retry"
" and not test_pooch_download_retry_fails_eventually"
" and not test_pooch_download_retry_off_by_default"
" and not test_pooch_logging_level"
" and not test_pooch_update"
" and not test_retrieve"
" and not test_retrieve_default_path"
" and not test_retrieve_fname"
" and not test_stream_download")
"--ignore=pooch/tests/test_downloaders.py")))
(propagated-inputs
(list python-packaging python-platformdirs python-requests))
(native-inputs
(list python-pytest python-setuptools-scm))
(home-page "https://github.com/fatiando/pooch")
(synopsis "Manage your Python library's sample data files")
(description
"Pooch manages your Python library's sample data files: it automatically
downloads and stores them in a local directory, with support for versioning
and corruption checks.")
(license license:bsd-3)))
(define-public python-fasteners
(package
(name "python-fasteners")
(version "0.17.3")
(source (origin
;; No tests in the pypi tarball
(method git-fetch)
(uri (git-reference
(url "https://github.com/harlowja/fasteners")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"0m0dxv8ljpkq99s3d1mib1zfb0ppx3h74h5yr8809zsrq2klfn0m"))))
(build-system pyproject-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest")))))))
(native-inputs (list python-diskcache python-more-itertools python-pytest))
(home-page "https://github.com/harlowja/fasteners")
(synopsis "Python package that provides useful locks")
(description
"This package provides a Python program that provides following locks:
@itemize
@item Locking decorator
@item Reader-writer locks
@item Inter-process locks
@item Generic helpers
@end itemize\n")
(license license:asl2.0)))
(define-public python-requests-file
(package
(name "python-requests-file")
(version "1.5.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "requests-file" version))
(sha256
(base32 "13kx4k83i9zcv20h0fnmawwwdzhcmw1z97mqib1h379qsc445mq7"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "python" "tests/test_requests_file.py")))))))
(propagated-inputs
(list python-requests python-six))
(home-page "https://github.com/dashea/requests-file")
(synopsis "File transport adapter for Requests")
(description
"Requests-File is a transport adapter for use with the Requests Python
library to allow local file system access via @code{file://} URLs.")
(license license:asl2.0)))
(define-public python-identify
(package
(name "python-identify")
(version "1.4.25")
(source
(origin
;; There are no tests in the PyPI tarball.
(method git-fetch)
(uri (git-reference
(url "https://github.com/chriskuehl/identify")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1fqgci6skckcq0x5pnxh6k2qjzn1ndsrgha1j6wwv1ld4g9bd3hz"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
;; system-error "utime" "~A" ("No such file or directory")
(delete 'ensure-no-mtimes-pre-1980)
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv")))))))
(native-inputs
(list python-coverage python-pytest))
(propagated-inputs
(list python-editdistance))
(home-page "https://github.com/chriskuehl/identify")
(synopsis "File identification library for Python")
(description
"@code{identify} is a file identification library for Python. Given
a file (or some information about a file), return a set of standardized tags
identifying what the file is.")
(license license:expat)))
(define-public python-tldextract
(package
(name "python-tldextract")
(version "3.3.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "tldextract" version))
(sha256
(base32
"1wac4yvcpgqjvls770mfx165amvy7gr00nnd2w24bqqwyamj9kdd"))))
(build-system python-build-system)
(native-inputs
(list python-pytest python-responses python-setuptools-scm))
(propagated-inputs
(list python-filelock python-idna python-requests python-requests-file))
(home-page
"https://github.com/john-kurkowski/tldextract")
(synopsis
"Separate the TLD from the registered domain and subdomains of a URL")
(description
"TLDExtract accurately separates the TLD from the registered domain and
subdomains of a URL, using the Public Suffix List. By default, this includes
the public ICANN TLDs and their exceptions. It can optionally support the
Public Suffix List's private domains as well.")
(license license:bsd-3)))
(define-public python-tldr
(package
(name "python-tldr")
(version "3.2.0")
(source
(origin
;; There's no test in PyPI.
(method git-fetch)
(uri (git-reference
(url "https://github.com/tldr-pages/tldr-python-client")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "0hkjsnz03p9pdfgk85wampha4pyr82bwmnj8hj6kigc784ddy2ag"))))
(build-system python-build-system)
(arguments
(list #:phases
#~(modify-phases %standard-phases
(add-after 'build 'build-doc
(lambda _
(invoke "make" "-C" "docs")))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
;; This test fails. It tries to open a network socket.
(invoke "pytest" "-vv" "-k" "not test_error_message")))))))
(native-inputs
(list python-pytest python-pytest-runner python-sphinx-argparse))
(inputs
(list python-argcomplete python-colorama python-termcolor python-shtab))
(home-page "https://github.com/tldr-pages/tldr-python-client")
(synopsis "Python command-line client for tldr pages")
(description "This package provides the @code{tldr} command allowing users
to view @code{tldr} pages from a shell. The @code{tldr} pages are a community
effort to simplify the man pages with practical examples.")
(license license:expat))) ; MIT license
(define-public python-nodeenv
(package
(name "python-nodeenv")
(version "1.4.0")
(source
(origin
;; There's no tarball in PyPI.
(method git-fetch)
(uri (git-reference
(url "https://github.com/ekalinin/nodeenv")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "0y443icx0w7jlzmxmmcm4q8dqfiwgafbb9cp8jpm68mbqxbz40a7"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
;; This test fails. It tries to open a network socket.
(invoke "pytest" "-vv" "-k" "not test_smoke"))))))
(native-inputs
(list python-coverage python-mock python-pytest))
(home-page "https://ekalinin.github.io/nodeenv/")
(synopsis "Create isolated node.js environments")
(description
"Nodeenv (node.js virtual environment) is a tool to create isolated
node.js environments. It creates an environment that has its own installation
directories, that doesn't share libraries with other node.js virtual
environments.")
(license license:bsd-3)))
(define-public python-pynamecheap
(package
(name "python-pynamecheap")
(version "0.0.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "PyNamecheap" version))
(sha256
(base32
"0wkbwz208j8nfrsmzmclvxg22ymknn0mlz76wbdza9k2bx2zja6l"))))
(build-system python-build-system)
(propagated-inputs
(list python-requests))
(home-page
"https://github.com/Bemmu/PyNamecheap")
(synopsis
"Namecheap API client in Python")
(description
"PyNamecheap is a Namecheap API client in Python.")
(license license:expat)))
(define-public python-pynixutil
(package
(name "python-pynixutil")
(version "0.5.0")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/nix-community/pynixutil")
(commit version)))
(file-name (git-file-name name version))
;; Derivation test uses nix.
(modules '((guix build utils)))
(snippet '(delete-file "tests/test_drv.py"))
(sha256
(base32
"1lnspcai7mqpv73bbd8kgyw63fxwgkwvfkl09b2bl5y2g2v7np6m"))))
(build-system pyproject-build-system)
(native-inputs (list poetry python-pytest))
(home-page "https://github.com/nix-community/pynixutil")
(synopsis "Utility functions for working with data from Nix in Python")
(description
"@code{pynixutil} provides functions for base32 encoding/decoding and
derivation parsing, namingly @code{b32decode()}, @code{b32encode()} and
@code{drvparse()}.")
(license license:expat)))
(define-public python-dns-lexicon
(package
(name "python-dns-lexicon")
(version "2.4.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "dns-lexicon" version))
(sha256
(base32
"0jdn3ns71bsybr7njgsqr9xlxsqh7zh6phn4ld0liazqdn2l5f6m"))))
(build-system python-build-system)
(arguments
`(#:tests? #f)) ;requires internet access
(propagated-inputs
(list python-future python-pynamecheap python-requests
python-tldextract python-urllib3))
(home-page "https://github.com/AnalogJ/lexicon")
(synopsis
"Manipulate DNS records on various DNS providers")
(description
"Lexicon provides a way to manipulate DNS records on multiple DNS
providers in a standardized way. It has a CLI but it can also be used as a
Python library. It was designed to be used in automation, specifically with
Let's Encrypt.")
(license license:expat)))
(define-public python-cfgv
(package
(name "python-cfgv")
(version "3.3.1")
(source
(origin
;; There are no tests in the PyPI tarball.
(method git-fetch)
(uri (git-reference
(url "https://github.com/asottile/cfgv")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1pci97cmn3v45sfch9s3lshidrl0309ls9byidic0l8drkwnkwcj"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv")))))))
(native-inputs
(list python-pytest))
(home-page "https://github.com/asottile/cfgv")
(synopsis "Configuration validation library")
(description
"This library helps to validate configuration files and produce human
readable error messages.")
(license license:expat)))
(define-public python-commandlines
(package
(name "python-commandlines")
(version "0.4.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "commandlines" version))
(sha256
(base32
"0r7xcr0knv02p4mswa2bng61nn8nbhhrs6kvdnb9bb3hhjvm1dl6"))))
(build-system python-build-system)
(home-page "https://github.com/chrissimpkins/commandlines")
(synopsis "Command line argument to object parsing library")
(description
"@code{Commandlines} is a Python library for command line application
development that supports command line argument parsing, command string
validation testing and application logic.")
(license license:expat)))
;; Make sure to upgrade python-llvmlite in (gnu packages llvm) together with
;; python-numba. They have a very unflexible relationship.
(define-public python-numba
(package
(name "python-numba")
(version "0.56.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "numba" version))
(sha256
(base32
"1vlnmirhay8gl36cxa94nvlgs41k9p7vdkp0xzbq65682bsgxn9j"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'disable-proprietary-features
(lambda _
(setenv "NUMBA_DISABLE_HSA" "1")
(setenv "NUMBA_DISABLE_CUDA" "1")))
(add-after 'unpack 'disable-failing-tests
(lambda _
;; This one test fails because a deprecation warning is printed.
(substitute* "numba/tests/test_import.py"
(("def test_no_accidental_warnings")
"def disabled_test_no_accidental_warnings"))
;; Some tests timeout or crash on some architectures.
,@(cond
((target-aarch64?)
`((substitute* "numba/tests/test_sets.py"
(("def test_add_discard")
"def disabled_test_add_discard")
(("def test_isdisjoint")
"def disabled_test_isdisjoint")
(("def test_issubset")
"def disabled_test_issubset")
(("def test_issuperset")
"def disabled_test_issuperset")
(("def test_remove_error")
"def disabled_test_remove_error"))))
((target-ppc64le?)
`((substitute* "numba/tests/test_mathlib.py"
(("def test_ldexp")
"def disabled_test_ldexp"))))
((target-arm32?)
;; Armhf emulation on aarch64 using armv8 machines returns
;; 'armv8l' from platform.machine() and won't skip some tests.
;; Fix borrowed from an upstream bug report:
;; https://github.com/numba/numba/issues/6345#issuecomment-764993001
`((substitute* '("numba/tests/support.py"
"numba/tests/test_dispatcher.py")
(("platform\\.machine\\(\\) == 'armv7l'")
(string-append
"platform.machine().startswith('armv') and "
"int(platform.machine()[len('armv'):-1]) >= 7")))))
(#t '()))))
(replace 'check
(lambda* (#:key tests? inputs outputs #:allow-other-keys)
(when tests?
(add-installed-pythonpath inputs outputs)
;; Something is wrong with the PYTHONPATH when running the
;; tests from the build directory, as it complains about not being
;; able to import certain modules.
(with-directory-excursion "/tmp"
(setenv "HOME" (getcwd))
(invoke "python3" "-m" "numba.runtests" "-v" "-m"))))))))
(propagated-inputs
(list python-llvmlite python-numpy python-singledispatch))
(native-inputs ;for tests
(list python-jinja2 python-pygments))
(home-page "https://numba.pydata.org")
(synopsis "Compile Python code using LLVM")
(description "Numba gives you the power to speed up your applications with
high performance functions written directly in Python. With a few
annotations, array-oriented and math-heavy Python code can be just-in-time
compiled to native machine instructions, similar in performance to C, C++ and
Fortran, without having to switch languages or Python interpreters.
Numba works by generating optimized machine code using the LLVM compiler
infrastructure at import time, runtime, or statically (using the included pycc
tool).")
(license license:bsd-3)))
(define-public python-numcodecs
(package
(name "python-numcodecs")
(version "0.10.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "numcodecs" version))
(sha256
(base32
"1i2rvm1f23dapcf6w3mj4877jzq5f24bhfa0fafbv1nr7xmqr0r2"))
(modules '((guix build utils)))
(snippet
'(begin
;; Only add CFLAGS on architectures where they are supported
(substitute* "setup.py"
(("import sys")
"import sys\nimport platform")
(("os\\.name == 'posix'")
(string-append "os.name + platform.machine() == 'posixx86_64' or"
" os.name + platform.machine() == 'posixx86'")))
(delete-file-recursively "c-blosc")
(for-each delete-file '("numcodecs/_shuffle.c"
"numcodecs/blosc.c"
"numcodecs/compat_ext.c"
"numcodecs/lz4.c"
"numcodecs/vlen.c"
"numcodecs/zstd.c"))))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
'(modify-phases %standard-phases
(add-after 'unpack 'disable-avx2
(lambda _
(setenv "DISABLE_NUMCODECS_AVX2" "1")))
(add-after 'unpack 'unbundle
(lambda _
(substitute* "setup.py"
(("sources=sources \\+ blosc_sources,")
"sources=sources,")
(("extra_compile_args=extra_compile_args")
"extra_compile_args=list(base_compile_args)")
(("'numcodecs.zstd',")
"'numcodecs.zstd', libraries=['zstd'], ")
(("'numcodecs.lz4',")
"'numcodecs.lz4', libraries=['lz4'], ")
(("'numcodecs.blosc',")
"'numcodecs.blosc', libraries=['blosc'], "))))
(add-before 'check 'build-extensions
(lambda _
;; Cython extensions have to be built before running the tests.
(invoke "python" "setup.py" "build_ext" "--inplace"))))))
(inputs
(list c-blosc lz4 zlib
`(,zstd "lib")))
(propagated-inputs
(list python-entrypoints
python-numpy
python-msgpack
python-typing-extensions))
(native-inputs
(list python-cython python-pytest python-setuptools-scm))
(home-page "https://github.com/zarr-developers/numcodecs")
(synopsis "Buffer compression and transformation codecs")
(description
"This Python package provides buffer compression and transformation
codecs for use in data storage and communication applications.")
(license license:expat)))
(define-public python-asciitree
(package
(name "python-asciitree")
(version "0.3.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "asciitree" version))
(sha256
(base32
"0vhgri2m2xlnibhz4xwn4hpbc7xacisxjqrk6k5kyppq96vbk92a"))))
(build-system python-build-system)
(home-page "https://github.com/mbr/asciitree")
(synopsis "Draws ASCII trees")
(description "This package draws tree structures using characters.")
(license license:expat)))
(define-public python-zarr
(package
(name "python-zarr")
(version "2.17.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "zarr" version))
(sha256
(base32
"1kjj0pk0s6306ljrig77m39zqdy32ch4nyja5lalab9l9v5sdfic"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
#~(list "-n" "auto"
;; This tests are flaky. The pass several times on my laptop
;; but occasionally fail. They fail pretty reliably on the
;; build farm.
"-k not test_lazy_loader and not open_array")
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'disable-service-tests
(lambda _
(setenv "ZARR_TEST_ABS" "0")
(setenv "ZARR_TEST_MONGO" "0")
(setenv "ZARR_TEST_REDIS" "0"))))))
(propagated-inputs
(list python-asciitree
python-fasteners
python-numcodecs
python-numpy))
(native-inputs
(list python-fsspec
python-pytest
python-h5py
python-pytest-doctestplus
python-pytest-timeout
python-pytest-xdist
python-setuptools-scm))
(home-page "https://github.com/zarr-developers/zarr-python")
(synopsis "Chunked, compressed, N-dimensional arrays for Python")
(description
"This package provides an implementation of chunked, compressed,
N-dimensional arrays for Python.")
(license license:expat)))
(define-public python-anndata
(package
(name "python-anndata")
(version "0.10.7")
(source
(origin
;; The tarball from PyPi doesn't include tests.
(method git-fetch)
(uri (git-reference
(url "https://github.com/theislab/anndata")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"1i08rm1xnsnq12rjv4virgdx61bra1gsfagjdq0kcpz8npxqa0as"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
'(list "-k" (string-append "not concatenation.rst"
;; fixture 'mocker' not found
" and not test_consecutive_bool"))
#:phases
#~(modify-phases %standard-phases
;; Doctests require scanpy from (gnu packages bioinformatics)
(add-after 'unpack 'disable-doctests
(lambda _
(substitute* "conftest.py"
(("import pytest")
(string-append "import pytest\nimport _pytest\n"))
(("pytest.DoctestItem")
"_pytest.doctest.DoctestItem"))
(substitute* "pyproject.toml"
(("--doctest-modules") ""))))
(add-before 'build 'set-version
(lambda _
(setenv "SETUPTOOLS_SCM_PRETEND_VERSION" #$version)
;; ZIP does not support timestamps before 1980.
(setenv "SOURCE_DATE_EPOCH" "315532800")))
;; Numba needs a writable dir to cache functions.
(add-before 'check 'set-numba-cache-dir
(lambda _
(setenv "NUMBA_CACHE_DIR" "/tmp"))))))
(propagated-inputs
(list python-array-api-compat
python-exceptiongroup ;only for Python <3.11
python-h5py
python-importlib-metadata
python-natsort
python-numcodecs
python-packaging
python-pandas
python-scipy
python-scikit-learn
python-zarr))
(native-inputs
(list python-awkward
python-boltons
python-dask
python-distributed
python-hatchling
python-hatch-vcs
python-joblib
python-loompy
python-matplotlib
python-pytest
python-pytest-doctestplus
python-pytest-xdist
python-toml
python-flit
python-setuptools-scm))
(home-page "https://github.com/theislab/anndata")
(synopsis "Annotated data for data analysis pipelines")
(description "Anndata is a package for simple (functional) high-level APIs
for data analysis pipelines. In this context, it provides an efficient,
scalable way of keeping track of data together with learned annotations and
reduces the code overhead typically encountered when using a mostly
object-oriented library such as @code{scikit-learn}.")
(license license:bsd-3)))
(define-public python-dill
(package
(name "python-dill")
(version "0.3.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "dill" version))
(sha256
(base32 "0wr37zwyiprrv29jcc1hl5cla72faiwfs0mhvbxxhmkqd3rmbnz5"))))
(build-system pyproject-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(with-directory-excursion "/tmp"
(invoke "nosetests" "-v"))))))))
(native-inputs
(list python-nose))
(home-page "https://pypi.org/project/dill/")
(synopsis "Serialize all of Python")
(description "Dill extends Python's @code{pickle} module for serializing
and de-serializing Python objects to the majority of the built-in Python
types. Dill provides the user the same interface as the @code{pickle} module,
and also includes some additional features. In addition to pickling Python
objects, @code{dill} provides the ability to save the state of an interpreter
session in a single command. Hence, it would be feasible to save a
interpreter session, close the interpreter, ship the pickled file to another
computer, open a new interpreter, unpickle the session and thus continue from
the saved state of the original interpreter session.")
(license license:bsd-3)))
(define-public python-multiprocess
(package
(name "python-multiprocess")
(version "0.70.14")
(source
(origin
(method url-fetch)
(uri (pypi-uri "multiprocess" version))
(sha256
(base32
"0splzd9w9yi42vl7b6mm99vb82jp2adhdrizw1xd4q125z0szp9y"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
'(modify-phases %standard-phases
(add-after 'unpack 'disable-broken-tests
(lambda _
;; The "wait_result" and "shared_memory..." tests are broken as
;; there is no keyboard interrupt.
;;
;; The "preload_resources" test fails as it cannot find
;; mp_preload.py.
(substitute* "py3.10/multiprocess/tests/__init__.py"
(("^(.*)def test_(\
wait_result|\
shared_memory_SharedMemoryServer_ignores_sigint|\
preload_resources\
)" line indent)
(string-append indent
"@unittest.skip(\"Disabled by Guix\")\n"
line)))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "python" "-m" "multiprocess.tests")))))))
(propagated-inputs
(list python-dill))
(home-page "https://pypi.org/project/multiprocess/")
(synopsis "Multiprocessing and multithreading in Python")
(description
"This package is a fork of the multiprocessing Python package, a package
which supports the spawning of processes using the API of the standard
library's @code{threading} module.")
(license license:bsd-3)))
(define-public python-multiprocessing-on-dill
(package
(name "python-multiprocessing-on-dill")
(version "3.5.0a4")
(source (origin
(method url-fetch)
(uri (pypi-uri "multiprocessing_on_dill" version))
(sha256
(base32
"1rs5a3hx1fcpfsxxkl5kx6g06c82wqjqgdqyny5l1ggl1wq0rmfn"))))
(build-system python-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv")))))))
(propagated-inputs (list python-dill))
(native-inputs (list python-check-manifest python-pytest python-wheel))
(home-page "https://github.com/sixty-north/multiprocessing_on_dill")
(synopsis "Multiprocessing using dill instead of pickle")
(description
"This package provides a friendly fork of multiprocessing which uses dill
instead of pickle.")
(license license:psfl)))
(define-public python-toolrack
(package
(name "python-toolrack")
(version "3.0.1")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/albertodonato/toolrack")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0ych11b7nchnkhqgf7dgivbvn2lzafjsi7nhb1an5zjjyns39gpx"))))
(build-system python-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'patch-/bin/sh
(lambda _
(substitute* "toolrack/aio/tests/test_process.py"
(("/bin/sh")
(which "sh")))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv" "--pyargs" "toolrack"
"-k"
(string-append
;; These tests fail for unknown reason comparing the
;; expected output of shell scripts.
"not test_parse_stderr "
"and not test_parse_no_ending_newline "
"and not test_parse_stdout"))))))))
(native-inputs (list python-pytest python-pytest-asyncio
python-pytest-mock))
(home-page "https://github.com/albertodonato/toolrack")
(synopsis "Collection of Python utility functions and classes")
(description "This package provides a collection of miscellaneous utility
functions and classes.")
(license license:lgpl3+)))
(define-public python-toolz
(package
(name "python-toolz")
(version "0.11.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "toolz" version))
(sha256
(base32
"0cxwlh8dz8gq0l0bzchjnqqwhdp261nfd958ppqm518k2mg2scbb"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key inputs outputs tests? #:allow-other-keys)
(when tests?
(add-installed-pythonpath inputs outputs)
(invoke "python" "-m" "pytest" "--doctest-modules"
"--pyargs" "toolz")))))))
(native-inputs
(list python-pytest))
(home-page "https://github.com/pytoolz/toolz/")
(synopsis "List processing tools and functional utilities")
(description
"This package provides a set of utility functions for iterators,
functions, and dictionaries.")
(license license:bsd-3)))
(define-public python-cytoolz
(package
(name "python-cytoolz")
(version "0.11.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "cytoolz" version))
(sha256
(base32
"1d12mgaippxxhn24w2hj0my3aqkx80fks5g4wzfdsvl0acqnc8za"))
(modules '((guix build utils)))
(snippet
'(for-each delete-file (find-files "cytoolz" "\\.c$")))))
(build-system python-build-system)
;; FIXME: tests fail with "module 'cytoolz.curried' has no attribute
;; 'exceptions'"
(arguments '(#:tests? #f))
(propagated-inputs
(list python-toolz))
(native-inputs
(list python-cython))
(home-page "https://github.com/pytoolz/cytoolz")
(synopsis "High performance functional utilities")
(description
"The cytoolz package implements the same API as provided by toolz. The
main differences are that @code{cytoolz} is faster and cytoolz offers a C API
that is accessible to other projects developed in Cython.")
(license license:bsd-3)))
(define-public python-sortedcollections
(package
(name "python-sortedcollections")
(version "2.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "sortedcollections" version))
(sha256
(base32
"1kfabpnjyjm5ml2zspry9jy3xq49aybchgaa4ahic2jqdjfn1sfq"))))
(build-system python-build-system)
(propagated-inputs
(list python-sortedcontainers))
(arguments '(#:tests? #f)) ; Tests not included in release tarball.
(home-page "https://www.grantjenks.com/docs/sortedcollections/")
(synopsis "Python Sorted Collections")
(description "Sorted Collections is a Python sorted collections library.")
(license license:asl2.0)))
(define-public python-sortedcontainers
(package
(name "python-sortedcontainers")
(version "2.4.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "sortedcontainers" version))
(sha256
(base32
"126vpywl7aly6zir033a9indgyficlzl68qls61nn2y3djhabji5"))))
(build-system python-build-system)
(arguments
;; TODO: Circular dependency on pytest.
'(#:tests? #f))
(home-page "https://grantjenks.com/docs/sortedcontainers/")
(synopsis "Sorted List, Sorted Dict, Sorted Set")
(description
"This package provides a sorted collections library, written in
pure-Python.")
(license license:asl2.0)))
(define python-cloudpickle-testpkg
(package
(name "python-cloudpickle-testpkg")
(version "1.6.0")
(source
(origin
;; Archive on pypi does not include test infrastructure.
(method git-fetch)
(uri (git-reference
(url "https://github.com/cloudpipe/cloudpickle")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1584d21d4rcpryn8yfz0pjnjprk4zm367m0razdcz8cjbsh0dxp6"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'chdir
(lambda _ (chdir "tests/cloudpickle_testpkg"))))))
(home-page "https://github.com/cloudpipe/cloudpickle")
(synopsis "Extended pickling support for Python objects")
(description
"Cloudpickle makes it possible to serialize Python constructs not
supported by the default pickle module from the Python standard library. It
is especially useful for cluster computing where Python expressions are
shipped over the network to execute on remote hosts, possibly close to the
data.")
(license license:bsd-3)))
(define-public python-cloudpickle
(package
(inherit python-cloudpickle-testpkg)
(name "python-cloudpickle")
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(if tests?
(invoke "pytest" "-s" "-vv")
(format #t "test suite not run~%")))))))
(native-inputs
(list ;; For tests.
python-cloudpickle-testpkg python-psutil python-pytest
python-tornado-6))
(home-page "https://github.com/cloudpipe/cloudpickle")
(synopsis "Extended pickling support for Python objects")
(description
"Cloudpickle makes it possible to serialize Python constructs not
supported by the default pickle module from the Python standard library. It
is especially useful for cluster computing where Python expressions are
shipped over the network to execute on remote hosts, possibly close to the
data.")
(license license:bsd-3)))
(define-public python-locket
(package
(name "python-locket")
(version "1.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "locket" version))
(sha256
(base32
"0cm6290zm3ba62n2x2piy3s8d41hrmffda2nw18ggfwb582lq3aw"))))
(build-system python-build-system)
(home-page "https://github.com/mwilliamson/locket.py")
(synopsis "File-based locks for Python")
(description
"Locket implements a lock that can be used by multiple processes provided
they use the same path.")
(license license:bsd-2)))
(define-public python-partd
(package
(name "python-partd")
(version "1.4.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "partd" version))
(sha256
(base32
"0rvz2si6lbyhk7hj804gilq2y2bfdi33q81iwwkmgskgkva5vhjn"))))
(build-system pyproject-build-system)
(propagated-inputs
(list python-locket python-numpy python-pandas python-pyzmq python-toolz))
(home-page "https://github.com/dask/partd/")
(synopsis "Appendable key-value storage")
(description "Partd stores key-value pairs. Values are raw bytes. We
append on old values. Partd excels at shuffling operations.")
(license license:bsd-3)))
(define-public python-fsspec
(package
(name "python-fsspec")
(version "2023.5.0")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/fsspec/filesystem_spec")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"0c0brw5s4330rj0yjcrqi56hanvaahn43854jai70qzqg1qvyl88"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'fix-version
(lambda _
(substitute* "fsspec/__init__.py"
(("__version__ = .*")
(string-append "__version__ = \"" #$version "\"")))
(substitute* "setup.py"
(("versioneer.get_version\\(\\)")
(string-append "\"" #$version "\""))))))
#:test-flags
'(list
;; requires internet access
"--ignore=fsspec/implementations/tests/test_dbfs.py")))
(propagated-inputs
(list python-aiohttp python-libarchive-c python-requests python-tqdm))
(native-inputs
(list python-pytest python-pytest-mock python-numpy))
(home-page "https://github.com/intake/filesystem_spec")
(synopsis "File-system specification")
(description "The purpose of this package is to produce a template or
specification for a file-system interface, that specific implementations
should follow, so that applications making use of them can rely on a common
behavior and not have to worry about the specific internal implementation
decisions with any given backend.")
(license license:bsd-3)))
;; Note: Remember to update python-distributed when updating dask.
(define-public python-dask
(package
(name "python-dask")
(version "2024.4.2")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/dask/dask/")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "1kaxlvqd5hknlb0awck5vcw9b18nl8rpxx4j78js8p9d0y5rsgw8"))))
(build-system pyproject-build-system)
(arguments
(list
;; Avoid coverage
#:test-flags
#~(list "-n" "auto"
"-m" "not gpu and not slow and not network"
;; These all fail with different hashes. Doesn't seem
;; problematic.
"--ignore-glob=**/test_tokenize.py"
;; ORC tests crash Python with a failure to find the global
;; localtime file. See also
;; https://github.com/apache/arrow/issues/40633.
"--ignore-glob=**/test_orc.py"
"-k" (string-append
;; This one cannot be interrupted.
"not test_interrupt"
;; This one fails with "local variable 'ctx' referenced
;; before assignment". Maybe enable this in later
;; versions (or when pandas has been upgraded.
" and not test_dt_accessor"
;; This fails when dask-expr is among the inputs.
" and not test_groupby_internal_repr"
;; This fails with different job ids.
" and not test_to_delayed_optimize_graph"
;; This one expects a deprecation warning that never
;; comes.
" and not test_RandomState_only_funcs")
;; Tests must run from the output directory, because otherwise
;; it complains about the difference between the target
;; directory embedded in the pyc files and the source directory
;; from which we run tests.
(getcwd))
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'versioneer
(lambda _
;; Our version of versioneer needs setup.cfg. This is adapted
;; from pyproject.toml.
(with-output-to-file "setup.cfg"
(lambda ()
(display "\
[versioneer]
VCS = git
style = pep440
versionfile_source = dask/_version.py
versionfile_build = dask/_version.py
tag_prefix =
parentdir_prefix = dask-
")))
(invoke "versioneer" "install")
(substitute* "setup.py"
(("versioneer.get_version\\(\\)")
(string-append "\"" #$version "\"")))))
(add-after 'unpack 'fix-pytest-config
(lambda _
;; This option is not supported by our version of pytest.
(substitute* "pyproject.toml"
(("--cov-config=pyproject.toml") ""))))
(add-after 'unpack 'patch-pyproject
(lambda _
;; We use pyarrow > 14
(substitute* "pyproject.toml"
(("\"pyarrow_hotfix\",") ""))))
(add-before 'check 'pre-check
(lambda _ (chdir "/tmp"))))))
(propagated-inputs
(list python-click ;needed at runtime
python-cloudpickle
python-dask-expr
python-fsspec
python-importlib-metadata ;needed at runtime for dask/_compatibility.py
python-numpy
python-packaging
python-pandas
python-partd
python-toolz
python-pyyaml))
(native-inputs
(list python-importlib-metadata
python-pytest
python-pytest-rerunfailures
python-pytest-runner
python-pytest-xdist
python-versioneer))
(home-page "https://github.com/dask/dask/")
(synopsis "Parallel computing with task scheduling")
(description
"Dask is a flexible parallel computing library for analytics. It
consists of two components: dynamic task scheduling optimized for computation,
and large data collections like parallel arrays, dataframes, and lists that
extend common interfaces like NumPy, Pandas, or Python iterators to
larger-than-memory or distributed environments. These parallel collections
run on top of the dynamic task schedulers.")
(license license:bsd-3)))
(define-public python-dask/bootstrap
(package
(inherit python-dask)
(properties '((hidden? . #true)))
(arguments
(substitute-keyword-arguments (package-arguments python-dask)
((#:tests? _ #t) #f)))
(propagated-inputs
(modify-inputs (package-propagated-inputs python-dask)
(delete "python-dask-expr")))))
(define-public python-dask-image
(package
(name "python-dask-image")
(version "2023.8.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "dask-image" version))
(sha256
(base32 "1dh49lvirf5fbgq5hw1c4972czg5w12fg9y689cinyjjn22qk6jy"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
;; Flake8 attribute errors.
'(list "--ignore=dask_image/ndfilters/_threshold.py"
"--ignore=dask_image/ndfourier/_utils.py"
"--ignore=dask_image/ndinterp/__init__.py"
"--ignore=dask_image/ndmeasure/__init__.py"
"--ignore=dask_image/ndmeasure/_utils/_find_objects.py"
"--ignore=dask_image/ndmeasure/_utils/_label.py"
"--ignore=tests/test_dask_image/test_ndfilters/test__conv.py"
"--ignore=tests/test_dask_image/test_ndfourier/test_core.py"
"--ignore=tests/test_dask_image/test_ndinterp/test_spline_filter.py"
"--ignore=tests/test_dask_image/test_ndmeasure/test_core.py"
"--ignore=tests/test_dask_image/test_ndmeasure/test_find_objects.py")))
(propagated-inputs (list python-dask
python-numpy
python-pandas-2
python-pims
python-scipy
python-tifffile))
(native-inputs
(list python-pytest-flake8 python-pytest))
(home-page "https://github.com/dask/dask-image")
(synopsis "Distributed image processing")
(description "This is a package for image processing with Dask arrays.
Features:
@itemize
@item Provides support for loading image files.
@item Implements commonly used N-D filters.
@item Includes a few N-D Fourier filters.
@item Provides some functions for working with N-D label images.
@item Supports a few N-D morphological operators.
@end itemize
")
(license license:bsd-3)))
(define-public python-ilinkedlist
(package
(name "python-ilinkedlist")
(version "0.4.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ilinkedlist" version))
(sha256
(base32
"0nrw4sr3afldrp7073hvc0rgdz282s0l819jdmj1i6nn05v33h0l"))))
(build-system python-build-system)
(native-inputs (list python-pytest))
(inputs (list python))
(home-page "https://github.com/luther9/ilinkedlist-py")
(synopsis "Immutable linked list library")
(description
"This is a implementation of immutable linked lists for Python. It
contains @code{nil} (the empty linked list) and a @code{Pair} class for nodes.
Since a linked list is treated as immutable, it is hashable, and its length
can be retrieved in constant time. Some of the terminology is inspired by
LISP. It is possible to create an improper list by creating a @code{Pair}
with a non-list @code{cdr}.")
(license license:gpl3+)))
(define-public python-readlike
(package
(name "python-readlike")
(version "0.1.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "readlike" version))
(sha256
(base32 "027w8fvi50ksl57q0a7kb5zvmq8jxaawnviib1jdqw0p3igvm1j4"))))
(build-system python-build-system)
(home-page "https://github.com/jangler/readlike")
(synopsis "GNU Readline-like line editing module")
(description
"This Python module provides line editing functions similar to the default
Emacs-style ones of GNU Readline. Unlike the Python standard library's
@code{readline} package, this one allows access to those capabilities in settings
outside of a standard command-line interface. It is especially well-suited to
interfacing with Urwid, due to a shared syntax for describing key inputs.
Currently, all stateless Readline commands are implemented. Yanking and history
are not supported.")
(license license:expat)))
(define-public python-reparser
(package
(name "python-reparser")
(version "1.4.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ReParser" version))
(sha256
(base32 "0nniqb69xr0fv7ydlmrr877wyyjb61nlayka7xr08vlxl9caz776"))))
(build-system python-build-system)
(home-page "https://github.com/xmikos/reparser")
(synopsis "Simple lexer/parser for inline markup based on regular expressions")
(description
"This Python library provides a simple lexer/parser for inline markup based
on regular expressions.")
(license license:expat)))
(define-public python-retrying
(package
(name "python-retrying")
(version "1.3.3")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/rholder/retrying")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1kqipkbdaw5s1xg0gi29awm03vp1x8dz24pjidgxagvkvrjpzhi7"))))
(build-system python-build-system)
(propagated-inputs
(list python-six))
(home-page "https://github.com/rholder/retrying")
(synopsis "Library for adding retry behavior")
(description "Retrying is a general-purpose retrying library to simplify
the task of adding retry behavior to just about anything.
Features:
@itemize
@item Generic Decorator API.
@item Specify stop condition (i.e. limit by number of attempts).
@item Specify wait condition (i.e. exponential backoff sleeping between attempts).
@item Customize retrying on Exceptions.
@item Customize retrying on expected returned result.
@end itemize")
(license license:asl2.0)))
(define-public python-precis-i18n
(package
(name "python-precis-i18n")
(version "1.0.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "precis_i18n" version))
(sha256
(base32
"1qfb78zpx565vqkg0xhx75pna9sc35m370vpcz82982c8ix3ypyz"))))
(build-system python-build-system)
(home-page "https://github.com/byllyfish/precis_i18n")
(synopsis "Implementation of the PRECIS framework")
(description
"This module implements the PRECIS Framework as described in RFC 8264,
RFC 8265 and RFC 8266.")
(license license:expat)))
(define-public python-absl-py
(package
(name "python-absl-py")
(version "1.4.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "absl-py" version))
(sha256
(base32
"0ga3b0m8lfsv1m3260p83lhis52yvz3d42q8gip4gfj823849hnj"))))
(build-system pyproject-build-system)
(home-page "https://github.com/abseil/abseil-py")
(synopsis "Abseil Python common libraries")
(description
"This package provides the Abseil Python Common Libraries, a collection
of Python libraries for building Python applications.")
(license license:asl2.0)))
(define-public python-astor
(package
(name "python-astor")
(version "0.8.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "astor" version))
(sha256
(base32
"0ppscdzzvxpznclkmhhj53iz314x3pfv4yc7c6gwxqgljgdgyvka"))))
(build-system python-build-system)
;; FIXME: There are two errors and two test failures.
(arguments `(#:tests? #f))
(home-page "https://github.com/berkerpeksag/astor")
(synopsis "Read and write Python ASTs")
(description "Astor is designed to allow easy manipulation of Python
source via the Abstract Syntax Tree.")
(license license:bsd-3)))
(define-public python-astunparse
(package
(name "python-astunparse")
(version "1.6.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "astunparse" version))
(sha256
(base32 "0wh8jjvwafxc7rvbyb13cdwndkicm7cry1bd8p1q9l7has23mnas"))))
(build-system python-build-system)
(arguments '(#:tests? #f)) ; there are none
(propagated-inputs
(list python-six python-wheel))
(home-page "https://github.com/simonpercivall/astunparse")
(synopsis "AST unparser for Python")
(description "This package provides an AST unparser for Python. It is a
factored out version of @code{unparse} found in the Python source
distribution.")
(license license:bsd-3)))
(define-public python-gast
(package
(name "python-gast")
(version "0.5.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "gast" version))
(sha256
(base32 "1sidaczriw54pfkj3523y9j9q2harrczc1qqgnfaylz641ca5gng"))))
(build-system python-build-system)
(arguments
'(#:phases (modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv")))))))
(native-inputs
(list python-pytest))
(propagated-inputs
(list python-astunparse))
(home-page "https://github.com/serge-sans-paille/gast/")
(synopsis "Generic Python AST that abstracts the underlying Python version")
(description
"GAST provides a compatibility layer between the AST of various Python
versions, as produced by @code{ast.parse} from the standard @code{ast}
module.")
(license license:bsd-3)))
(define-public python-wikidata
(package
(name "python-wikidata")
(version "0.6.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Wikidata" version))
(sha256
(base32
"08nlnydddfp1jj0cdmshvld1irzngbp3dij928wqsg9ziklm6mw9"))))
(build-system python-build-system)
(propagated-inputs
(list python-babel))
(home-page "https://github.com/dahlia/wikidata")
(synopsis "Wikidata client library")
(description
"This package provides a Python interface to
@url{https://www.wikidata.org/, Wikidata}.")
(properties '((upstream-name . "Wikidata")))
(license license:gpl3+)))
(define-public python-doctest-ignore-unicode
(package
(name "python-doctest-ignore-unicode")
(version "0.1.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "doctest-ignore-unicode" version))
(sha256
(base32
"1m9aa4qnyj21lbq4sbvmv1vcz7zksss4rz37ddf2hxv4hk8b547w"))))
(build-system python-build-system)
(native-inputs
(list python-nose))
(home-page "https://github.com/gnublade/doctest-ignore-unicode")
(synopsis "Ignore Unicode literal prefixes in doctests")
(description
"This package adds support for a flag to ignore Unicode literal prefixes
in doctests.")
(license license:asl2.0)))
(define-public python-attr
(package
(name "python-attr")
(version "0.3.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "attr" version))
(sha256
(base32
"0pbpskvxp5hzdvcaf766ljwpckshir8sf7z6jqji6zyib20594ch"))))
(build-system python-build-system)
(home-page "https://github.com/denis-ryzhkov/attr")
(synopsis "Decorator for attributes of target function or class")
(description "Simple decorator to set attributes of target function or
class in a @acronym{DRY, Don't Repeat Yourself} way.")
(license license:expat)))
(define-public python-construct
(package
(name "python-construct")
(version "2.10.68")
(source
(origin
;; There are no tests in the PyPI tarball.
(method git-fetch)
(uri (git-reference
(url "https://github.com/construct/construct")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1b59kq8scxhn9afqgmksk45n53gawylqm8gw3k0vmljg274xi7vf"))))
(build-system python-build-system)
(arguments
(list #:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-v" "tests/")))))))
(native-inputs
(list python-pytest python-pytest-benchmark))
(propagated-inputs
(list python-arrow
python-cloudpickle
python-lz4
python-numpy
python-ruamel.yaml))
(home-page "https://construct.readthedocs.io")
(synopsis "Declarative and symmetrical parser and builder for binary data")
(description
"This package provides both simple, atomic constructs (such as
integers of various sizes), as well as composite ones which allow you
form hierarchical and sequential structures of increasing complexity.
It features bit and byte granularity, easy debugging and testing, an
easy-to-extend subclass system, and lots of primitive constructs to
make your work easier.")
(license license:expat)))
(define-public python-outcome
(package
(name "python-outcome")
(version "1.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "outcome" version))
(sha256
(base32 "0wi6bmsfn73aw1hbpa1nhhshlx9k2vxcl7kp3z7h78sxwhyvv0kg"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key inputs outputs #:allow-other-keys)
(add-installed-pythonpath inputs outputs)
(invoke "pytest" "-vv"))))))
(native-inputs
(list python-pytest python-pytest-cov python-pytest-asyncio))
(propagated-inputs
(list python-attrs))
(home-page "https://github.com/python-trio/outcome")
(synopsis "Capture the outcome of Python function calls")
(description
"Capture the outcome of Python function calls. Extracted from the Trio
project.")
;; Either license applies.
(license (list license:expat license:asl2.0))))
(define-public python-trio
(package
(name "python-trio")
(version "0.21.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "trio" version))
(sha256
(base32 "04qwzy4295ajxpns0hrmn3asma80sjpimzpb3i877vwynsvkjgsj"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch-sleep
(lambda _
(substitute* "trio/tests/test_subprocess.py"
(("/bin/sleep")
(which "sleep")))))
(add-before 'check 'change-home
(lambda _
;; Tests require a writable home.
(setenv "HOME" "/tmp")))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv"
"-n" (number->string (parallel-job-count))
"-k"
(string-append
;; This test times out.
"not test_ki_protection_works"
;; Assertion errors.
" and not test_guest_mode_ki"
" and not test_run_in_trio_thread_ki"
" and not test_simple_cancel_scope_usage_doesnt_create\
_cyclic_garbage"
" and not test_nursery_cancel_doesnt_create_cyclic_garbage"
" and not test_cancel_scope_exit_doesnt_create_cyclic_garbage"
" and not test_locals_destroyed_promptly_on_cancel"
" and not test_ipython_exc_handler"
" and not test_for_leaking_fds"
;; Signals don’t work in the build sandbox.
" and not test_open_signal_receiver"
;; These try to raise KeyboardInterrupt which does not work
;; in the build environment.
" and not test_ki_self"
" and not test_ki_wakes_us_up"
;; Failure in name resolution.
" and not test_getnameinfo"
" and not test_SocketType_resolve"
;; OSError: protocol not found.
" and not test_getprotobyname"
;; EOFError: Ran out of input.
" and not test_static_tool_sees_all_symbols")
"trio/tests")))))))
(native-inputs
(list python-astor
python-ipython
python-jedi
python-pylint
python-pyopenssl
python-pytest
python-pytest-xdist
python-pytest-cov
python-trustme))
(propagated-inputs
(list python-async-generator
python-attrs
python-cffi
python-exceptiongroup
python-idna
python-outcome
python-sniffio
python-sortedcontainers))
(home-page "https://github.com/python-trio/trio")
(synopsis "Friendly Python library for async concurrency and I/O")
(description
"Trio strives to be a production-quality, async/await-native I/O library
for Python. Like all async libraries, its main purpose is to help you write
programs that do multiple things at the same time with parallelized I/O.")
;; Either license applies.
(license (list license:expat license:asl2.0))))
(define-public python-trio-typing
(package
(name "python-trio-typing")
(version "0.8.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "trio-typing" version))
(sha256
(base32 "15wa66cs165wawh4pi808ac43n67b8jqddi5ppdcbkj5gfi68hpi"))))
(build-system pyproject-build-system)
(native-inputs (list python-attrs python-pytest))
(propagated-inputs
(list python-mypy python-mypy-extensions python-trio
python-typing-extensions))
(home-page "https://github.com/python-trio/trio-typing")
(synopsis "Static type checking support for Trio and related projects")
(description
"This package provides:
@itemize
@item PEP 561 typing stubs packages for the Trio project packages:
@itemize
@item trio (@code{trio-stubs})
@item outcome (@code{outcome-stubs})
@item async_generator (@code{async_generator-stubs})
@end itemize
@item A package @code{trio_typing} containing types that Trio programs often
want to refer to (@code{AsyncGenerator[Y, S]} and @code{TaskStatus[T])} and
a mypy plugin that smooths over some limitations in the basic type hints.
@end itemize")
;; Either license applies.
(license (list license:expat license:asl2.0))))
(define-public python-trio-websocket
(package
(name "python-trio-websocket")
(version "0.9.2")
(source
(origin
(method git-fetch) ;no tests in pypi archive
(uri (git-reference
(url "https://github.com/HyperionGray/trio-websocket")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "1yk2ak991kbl30xg8ldpggack1lwkizd7s5cpr28ir34z8iyjnpi"))))
(build-system pyproject-build-system)
(native-inputs (list python-pytest python-pytest-trio python-trustme))
(propagated-inputs (list python-async-generator python-trio python-wsproto))
(home-page "https://github.com/HyperionGray/trio-websocket")
(synopsis "WebSocket library for Trio")
(description "This library implements both server and client aspects of
the @url{https://tools.ietf.org/html/rfc6455, the WebSocket protocol},
striving for safety, correctness, and ergonomics. It is based on the
@url{https://wsproto.readthedocs.io/en/latest/, wsproto project}, which is a
@url{https://sans-io.readthedocs.io/, Sans-IO} state machine that implements
the majority of the WebSocket protocol, including framing, codecs, and events.
This library handles I/O using @url{https://trio.readthedocs.io/en/latest/,
the Trio framework}.")
(license license:expat)))
(define-public python-humanize
(package
(name "python-humanize")
(version "4.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "humanize" version))
(sha256
(base32
"006vpl19bffy9fn0sssxbfakcvgrx7fhvy6l515fzln7vwpqf7zf"))))
(build-system pyproject-build-system)
(native-inputs
(list python-freezegun python-pytest))
(home-page "https://github.com/jmoiron/humanize")
(synopsis "Print numerical information in a human-readable form")
(description "This package provides a Python module that displays numbers
and dates in \"human readable\" forms. For example, it would display
\"12345591313\" as \"12.3 billion\".")
(license license:expat)))
(define-public python-txaio
(package
(name "python-txaio")
(version "23.1.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "txaio" version))
(sha256
(base32
"017p9x0bssf7g9slmf30ddh1baawsmxas4nivx334pkfjxp23agr"))))
(build-system pyproject-build-system)
(native-inputs
(list python-pytest python-twisted))
(home-page "https://github.com/crossbario/txaio")
(synopsis "Compatibility layer between Python asyncio and Twisted")
(description "Txaio provides a compatibility layer between the Python
@code{asyncio} module and @code{Twisted}.")
(license license:expat)))
(define-public python-toolshed
(package
(name "python-toolshed")
(version "0.4.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "toolshed" version))
(sha256
(base32
"14zvz51gzf9i1i3d1sj363ba4rksl6lcf4lz1arl8hpqgcbir8r3"))))
(build-system python-build-system)
(native-inputs
(list python-nose))
(home-page "https://github.com/brentp/toolshed/")
(synopsis "Collection of modules and functions for working with data")
(description "This is a collection of well-tested, simple modules and
functions that aim to reduce boilerplate when working with data.")
(license license:bsd-2)))
(define-public python-annoy
(package
(name "python-annoy")
(version "1.15.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "annoy" version))
(sha256
(base32
"1rxn6snn0r32r07g45hdjhh8aa1xzx6fjrm8g62d8vzp46z7rzrp"))))
(build-system python-build-system)
(native-inputs
(list python-nose))
(home-page "https://github.com/spotify/annoy/")
(synopsis "Approximate nearest neighbors library")
(description
"Annoy is a C++ library with Python bindings to search for points in
space that are close to a given query point. It also creates large read-only
file-based data structures that are @code{mmap}ped into memory so that many
processes may share the same data.")
(license license:asl2.0)))
(define-public python-croniter
(package
(name "python-croniter")
(version "1.3.4")
(source (origin
(method url-fetch)
(uri (pypi-uri "croniter" version))
(sha256
(base32
"1whbm26m9kpn0klgr9dqiqpp83ki9nhpxifaq9afcjw32rckcs9i"))))
(build-system python-build-system)
(propagated-inputs (list python-dateutil))
(home-page "https://github.com/kiorky/croniter")
(synopsis "Iterate datetime objects with cron-like syntax")
(description
"@code{croniter} provides iteration for datetime object with cron-like
format.")
(license license:expat)))
(define-public python-crontab
(package
(name "python-crontab")
(version "3.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri name version))
(sha256
(base32 "0yd3vdhl7z8lxa30czsry65srha51ppdcwnhjgxx9pwx0djp9yvr"))))
(build-system python-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-before 'check 'disable-failing-tests
(lambda _
(substitute* '("tests/test_compatibility.py"
"tests/test_frequency.py")
(("test_07_non_posix_shell")
"__off_test_07_non_posix_shell")
;; AssertionError: 48 != 24
(("test_20_frequency_at_year")
"__off_test_20_frequency_at_year")))))))
(inputs
(list python-dateutil))
(home-page "https://gitlab.com/doctormo/python-crontab/")
(synopsis "Module for reading and writing crontab files")
(description "This Python module can read, write crontab files, and
access the system cron automatically and simply using a direct API.")
(license license:lgpl3+)))
(define-public python-apscheduler
(package
(name "python-apscheduler")
(version "3.10.4")
(source (origin
(method url-fetch)
(uri (pypi-uri "APScheduler" version))
(sha256
(base32
"0jpg9jyx95jafkq0hz6sx7r4l2z5gc599ivb9278kgnr4wdhgpz6"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-pytz
python-six
python-tzlocal))
(native-inputs (list python-mock
python-twisted
python-gevent
python-setuptools-scm
python-sqlalchemy
python-pyside-6
python-pytest
python-pytest-asyncio
python-pytest-cov
python-pytest-tornado5))
(home-page "https://github.com/agronholm/apscheduler")
(synopsis "Task scheduling library for Python")
(description "Advanced Python Scheduler (APScheduler) is a Python library
that lets you schedule your Python code to be executed later, either just once
or periodically.
You can add new jobs or remove old ones on the fly as you please. If you store
your jobs in a database, they will also survive scheduler restarts and maintain
their state. When the scheduler is restarted, it will then run all the jobs it
should have run while it was offline.")
(license license:expat)))
(define-public python-pylzma
(package
(name "python-pylzma")
(version "0.5.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pylzma" version))
(sha256
(base32
"074anvhyjgsv2iby2ql1ixfvjgmhnvcwjbdz8gk70xzkzcm1fx5q"))))
(build-system python-build-system)
(home-page "https://www.joachim-bauch.de/projects/pylzma/")
(synopsis "Python bindings for the LZMA library by Igor Pavlov")
(description "This package provides Python bindings for the LZMA library
by Igor Pavlov.")
(license license:lgpl2.1+)))
(define-public python-ifaddr
(package
(name "python-ifaddr")
(version "0.1.7")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ifaddr" version))
(sha256
(base32
"150sxdlicwrphmhnv03ykxplyd2jdrxz0mikgnivavgilrn8m7hz"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _ (invoke "nosetests"))))))
(native-inputs
(list python-nose))
(home-page "https://github.com/pydron/ifaddr")
(synopsis "Network interface and IP address enumeration library")
(description "This package provides a network interface and IP address
enumeration library in Python.")
(license license:expat)))
(define-public python-zeroconf
(package
(name "python-zeroconf")
(version "0.38.1")
(source
(origin
(method git-fetch) ; no tests in PyPI release
(uri (git-reference
(url "https://github.com/jstasiak/python-zeroconf")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "1p1a0ywlg5sq0ilcphmz9h4kayscz0q1lyfk57j7mwxyx4gl9cpi"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
#~(list "-k" (string-append
;; Networking isn't available for these tests.
"not test_integration_with_listener_ipv6"
" and not test_launch_and_close_v4_v6"
" and not test_launch_and_close_context_manager"
" and not test_launch_and_close"
" and not test_close_multiple_times"))))
(native-inputs
(list python-pytest))
(propagated-inputs
(list python-ifaddr))
(home-page "https://github.com/jstasiak/python-zeroconf")
(synopsis "Pure Python mDNS service discovery")
(description "Pure Python multicast DNS (mDNS) service discovery library
(Bonjour/Avahi compatible).")
(license license:lgpl2.1+)))
(define-public python-bsddb3
(package
(name "python-bsddb3")
(version "6.2.9")
(source
(origin
(method url-fetch)
(uri (pypi-uri "bsddb3" version))
(sha256
(base32 "00bqdsfx8jgmfz5bgkx10nlw5bfsw11a86f91zkl53snvk45xl3h"))))
(build-system python-build-system)
(inputs
(list bdb))
(arguments
'(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'configure-locations
(lambda* (#:key inputs #:allow-other-keys)
(setenv "BERKELEYDB_DIR" (assoc-ref inputs "bdb"))
(setenv "YES_I_HAVE_THE_RIGHT_TO_USE_THIS_BERKELEY_DB_VERSION" "1")
#t))
(replace 'check
(lambda _
(invoke "python3" "test3.py" "-v"))))))
(home-page "https://www.jcea.es/programacion/pybsddb.htm")
(synopsis "Python bindings for Oracle Berkeley DB")
(description
"This module provides a nearly complete wrapping of the Oracle/Sleepycat
C API for the Database Environment, Database, Cursor, Log Cursor, Sequence and
Transaction objects, and each of these is exposed as a Python type in the
bsddb3.db module. The database objects can use various access methods: btree,
hash, recno, and queue. Complete support of Berkeley DB distributed
transactions. Complete support for Berkeley DB Replication Manager.
Complete support for Berkeley DB Base Replication. Support for RPC.")
(license license:bsd-3)))
(define-public python-dbfread
(package
(name "python-dbfread")
(version "2.0.7")
(source (origin
(method url-fetch)
(uri (pypi-uri "dbfread" version))
(sha256
(base32
"0gdpwdzf1fngsi6jrdyj4qdf6cr7gnnr3zp80dpkzbgz0spskj07"))))
(build-system python-build-system)
(native-inputs
(list python-pytest))
(home-page "https://dbfread.readthedocs.io")
(synopsis "Read DBF Files with Python")
(description
"This library reads DBF files and returns the data as native Python data
types for further processing. It is primarily intended for batch jobs and
one-off scripts.")
(license license:expat)))
(define-public python-cached-property
(package
(name "python-cached-property")
(version "1.5.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "cached-property" version))
(sha256
(base32
"0c51i6yzg6dlq6zhk4c6nv33mg8gv05kkan36k9b5jzf71c7b9cz"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
;; https://github.com/pydanny/cached-property/issues/131
;; recent versions of freezegun break one test
(add-after 'unpack 'disable-broken-test
(lambda _
(substitute* "tests/test_cached_property.py"
(("def test_threads_ttl_expiry\\(self\\)" m)
(string-append "@unittest.skip(\"Disabled by Guix\")\n"
" " m)))
#t)))))
(native-inputs
(list python-freezegun))
(home-page
"https://github.com/pydanny/cached-property")
(synopsis
"Decorator for caching properties in classes")
(description
"This package provides a decorator which makes caching
time-or-computationally-expensive properties quick and easy and works in Python
2 or 3.")
(license license:bsd-3)))
(define-public python-folium
(package
(name "python-folium")
(version "0.16.0")
(source
(origin
;; PyPI has a ".whl" file but not a proper source release.
;; Thus, fetch code from Git.
(method git-fetch)
(uri (git-reference
(url "https://github.com/python-visualization/folium")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1dbndpqpd7c5pmc58yxz7m6bsll377fz7xqpzh58wm0hjn6ylc00"))))
(build-system pyproject-build-system)
(arguments
(list #:test-flags
;; This file requires Selenium.
#~(list "--ignore" "tests/selenium/test_selenium.py"
"-k" (string-append
;; The tests below also require Selenium.
"not test__repr_png_is_bytes"
" and not test_valid_png"
" and not test_valid_png_size"
" and not test_geojson"
" and not test_heat_map_with_weights"
;; This performs an online request.
" and not test_json_request"
;; AssertionError.
" and not test_minimap"))
#:phases
#~(modify-phases %standard-phases
(add-before 'build 'pretend-version
;; The version string is usually derived via setuptools-scm,
;; but without the git metadata available, the version string
;; is set to '0.0.0'.
(lambda _
(setenv "SETUPTOOLS_SCM_PRETEND_VERSION"
#$(package-version this-package)))))))
(propagated-inputs
(list python-branca
python-jinja2
python-numpy
python-requests
python-xyzservices))
(native-inputs
(list python-geopandas
python-nbconvert
python-pandas
python-pillow
python-pytest
python-selenium
python-setuptools-scm))
(home-page "https://github.com/python-visualization/folium")
(synopsis "Make beautiful maps with Leaflet.js & Python")
(description "@code{folium} makes it easy to visualize data that’s been
manipulated in Python on an interactive leaflet map. It enables both the
binding of data to a map for @code{choropleth} visualizations as well as
passing rich vector/raster/HTML visualizations as markers on the map.
The library has a number of built-in tilesets from OpenStreetMap, Mapbox, and
Stamen, and supports custom tilesets with Mapbox or Cloudmade API keys. It
supports Image, Video, GeoJSON and TopoJSON overlays.")
(license license:expat)))
(define-public python-mercantile
(package
(name "python-mercantile")
(version "1.2.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "mercantile" version))
(sha256
(base32 "0sxmndhzzrvss5irsgzfrk51k6jihwcb7661992mizdgbnqnsg7s"))))
(build-system python-build-system)
(propagated-inputs (list python-click))
(native-inputs
(list python-check-manifest python-hypothesis python-pytest))
(home-page "https://github.com/mapbox/mercantile")
(synopsis "Web mercator XYZ tile utilities")
(description "The mercantile module provides @code{ul(xtile, ytile, zoom)}
and @code{bounds(xtile, ytile, zoom)} functions that respectively return the
upper left corner and bounding longitudes and latitudes for XYZ tiles, a
@code{xy(lng, lat)} function that returns spherical mercator x and y
coordinates, a @code{tile(lng, lat, zoom)} function that returns the tile
containing a given point, and quadkey conversion functions
@code{quadkey(xtile, ytile, zoom)} and @code{quadkey_to_tile(quadkey)} for
translating between quadkey and tile coordinates.")
(license license:bsd-3)))
(define-public python-xyzservices
(package
(name "python-xyzservices")
(version "2022.4.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "xyzservices" version))
(sha256
(base32 "1paxv4i0dws85md7csv7pf80jl3xh792mx8rxnsrk61ks3ivbsyg"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags #~(list "-m" "not request")))
(native-inputs
(list python-pytest python-mercantile python-requests))
(home-page "https://github.com/geopandas/xyzservices")
(synopsis "Source of XYZ tiles providers")
(description "@code{xyzservices} is a lightweight library providing a
repository of available XYZ services offering raster basemap tiles. The
repository is provided via Python API and as a compressed JSON file.")
(license license:bsd-3)))
(define-public jube
(package
;; This is a command-line tool, so no "python-" prefix.
(name "jube")
(version "2.6.1")
(source (origin
(method url-fetch)
(uri (string-append
"http://apps.fz-juelich.de/jsc/jube/jube2/download.php?version="
version))
(sha256
(base32
"0r5d2gdqa0f4c468q3k25ycw1k2g76gg8fyiln4ni98fvfsbx3il"))
(file-name (string-append "jube-" version ".tar.gz"))))
(build-system python-build-system)
(native-inputs (list python-pyyaml)) ; pyyaml is needed for tests
(home-page "https://apps.fz-juelich.de/jsc/jube/jube2/docu/index.html")
(synopsis "Benchmarking environment")
(description
"JUBE helps perform and analyze benchmarks in a systematic way. For each
benchmarked application, benchmark data is stored in a format that allows JUBE
to deduct the desired information. This data can be parsed by automatic pre-
and post-processing scripts that draw information and store it more densely
for manual interpretation.")
(license license:gpl3+)))
(define-public python-pyroutelib3
(package
(name "python-pyroutelib3")
(version "1.3.post1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pyroutelib3" version))
(sha256
(base32
"1hpbydpn2alyswiajfbvhzq4c7f36vdmvxy91hgv8l1lb2g2vfrj"))))
(build-system python-build-system)
(propagated-inputs
(list python-dateutil))
(home-page "https://github.com/MKuranowski/pyroutelib3")
(synopsis "Library for simple routing on OSM data")
(description "Library for simple routing on OSM data")
(license license:gpl3+)))
(define-public python-bibtexparser
(package
(name "python-bibtexparser")
(version "1.4.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "bibtexparser" version))
(sha256
(base32
"1rmc178qqb8814v3pcfv4qgl8rxmkd11d56limkqmi776jyf4z6a"))))
(build-system python-build-system)
(propagated-inputs (list python-pyparsing))
(native-inputs (list python-future))
(home-page "https://github.com/sciunto-org/python-bibtexparser")
(synopsis "Python library to parse BibTeX files")
(description "BibtexParser is a Python library to parse BibTeX files.")
(license (list license:bsd-3 license:lgpl3))))
(define-public python-distro
(package
(name "python-distro")
(version "1.6.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "distro" version))
(sha256
(base32
"09441261dd3c8b2gv15vhw1cryzg60lmgpkk07v6hpwwkyhfbxc3"))))
(build-system python-build-system)
(native-inputs
(list python-pytest))
(home-page "https://github.com/nir0s/distro")
(synopsis
"OS platform information API")
(description
"@code{distro} provides information about the OS distribution it runs on,
such as a reliable machine-readable ID, or version information.
It is the recommended replacement for Python's original
`platform.linux_distribution` function (which will be removed in Python 3.8).
@code{distro} also provides a command-line interface to output the platform
information in various formats.")
(license license:asl2.0)))
(define-public python-cairosvg
(package
(name "python-cairosvg")
(version "2.5.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "CairoSVG" version))
(sha256
(base32 "1ylsisha2cc4w0yydxwhy7idkfw1inl9fsipxsrm7vyby080vi9z"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _ (invoke "pytest"))))))
(propagated-inputs
(list python-cairocffi python-cssselect2 python-defusedxml
python-pillow python-tinycss2))
(native-inputs
(list python-pytest-flake8 python-pytest-isort python-pytest-runner))
(home-page "https://cairosvg.org/")
(synopsis "SVG to PDF/PS/PNG converter based on Cairo")
(description "CairoSVG is a SVG converter based on Cairo. It can export
SVG files to PDF, PostScript and PNG files. The main part of CairoSVG is a
SVG parser, trying to follow the SVG 1.1 recommendation from the W3C. Once
parsed, the result is drawn to a Cairo surface that can be exported to
qvarious formats: PDF, PostScript, PNG and even SVG.")
(license license:lgpl3+)))
(define-public python-pyphen
(package
(name "python-pyphen")
(version "0.10.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Pyphen" version))
(sha256
(base32 "0a1iwrgs4hzwzz60q4i1813kbzimhm0i4q8grh8vqkxhnkgj36vi"))))
(build-system python-build-system)
;; TODO: Use the Guix system hyphenation packages hyphen-* rather than the
;; embedded set provided by upstream - like Debian does.
(home-page "https://github.com/Kozea/Pyphen")
(synopsis "Pure Python module to hyphenate text")
(description "Pyphen is a pure Python module to hyphenate text using
existing Hunspell hyphenation dictionaries.")
(license (list license:gpl2 license:lgpl2.1 license:mpl1.1))))
(define-public python-intelhex
(package
(name "python-intelhex")
(version "2.3.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "intelhex" version))
(sha256
(base32
"14q04p6qs47ab9w55232ylrdn4wm9rswz36s6x999x0rlxhp6aw9"))))
(build-system python-build-system)
(home-page "https://pypi.org/project/IntelHex/")
(synopsis "Python library for Intel HEX files manipulations")
(description "The Intel HEX file format is widely used in microprocessors
and microcontrollers area (embedded systems etc.) as the de facto standard for
representation of code to be programmed into microelectronic devices. This
package provides an intelhex Python library to read, write, create from
scratch and manipulate data from Intel HEX file format. It also includes
several convenience Python scripts, including \"classic\" hex2bin and bin2hex
converters and more, those based on the library itself.")
(license license:bsd-3)))
(define-public python-interlap
(package
(name "python-interlap")
(version "0.2.7")
(source (origin
(method url-fetch)
(uri (pypi-uri "interlap" version))
(sha256
(base32
"1jbfh00bkrf0i5psa6n75rlgmqp5389xixa9j29w8rxhah6g7r1i"))))
(build-system python-build-system)
(home-page "https://brentp.github.io/interlap")
(synopsis "Fast, simple interval overlap testing")
(description "InterLap does fast interval overlap testing with a simple Python data
structure.")
(license license:expat)))
(define-public python-pykwalify
(package
(name "python-pykwalify")
(version "1.7.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pykwalify" version))
(sha256
(base32
"1cnfzkg1b01f825ikpw2fhjclf9c8akxjfrbd1vc22x1lg2kk2vy"))))
(build-system python-build-system)
(arguments '(#:tests? #f)) ;missing dependencies
(propagated-inputs
(list python-dateutil python-docopt python-pyyaml))
(home-page "https://github.com/grokzen/pykwalify")
(synopsis
"Python lib/cli for JSON/YAML schema validation")
(description
"This package provides a parser, schema validator, and data binding tool
for YAML and JSON.")
(license license:expat)))
(define-public python-dbus-python
(package
(name "python-dbus-python")
(version "1.3.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "dbus-python" version))
(sha256
(base32 "1y28h90v2ib8zqhs3r2yr7ycg8ccwvw3gqkvadlm12v1129q2rxd"))))
(build-system pyproject-build-system)
(arguments
(list #:phases #~(modify-phases %standard-phases
(add-after 'unpack 'patch-requirements
(lambda _
(substitute* (list "pyproject.toml" "setup.py")
(("'(ninja|patchelf)',?") ""))
(substitute* "setup.cfg"
(("(ninja|patchelf)") "")))))))
(inputs (list dbus glib))
(propagated-inputs (list python-pygobject))
(native-inputs (list pkg-config
python-meson-python
meson ninja patchelf
python-sphinx python-sphinx-rtd-theme
python-tappy
python-wheel))
(home-page "https://dbus.freedesktop.org/doc/dbus-python/")
(synopsis "Python bindings for libdbus")
(description "This package provides Python bindings to libdbus, the
reference implementation of the D-Bus protocol.")
(license license:expat)))
(define-public python-dbusmock
(package
(name "python-dbusmock")
(version "0.30.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "python-dbusmock" version))
(sha256
(base32
"1hanz6x76jq66ypdirga5h15zjs67kwysl6rmsf0i22dbdqrxdfv"))))
(build-system python-build-system)
(arguments
(list #:modules `((guix build python-build-system)
(guix build utils)
(ice-9 match))
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'patch-paths
(lambda* (#:key inputs #:allow-other-keys)
(substitute* "tests/test_api.py"
(("/usr/bin/python3")
(which "python3")))
(substitute* "tests/test_code.py"
(("/bin/bash")
(which "bash")))
(substitute* "dbusmock/testcase.py"
(("'dbus-daemon'")
(object->string
(search-input-file inputs "/bin/dbus-daemon"))))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(match (primitive-fork)
(0 ;child process
(execlp "pytest" "pytest" "-vv"))
(pytest-pid
(let loop ()
;; Reap child processes; otherwise, python-dbusmock
;; would waste time polling for the dbus processes
;; it spawns to be reaped, in vain.
(match (waitpid WAIT_ANY)
((pid . status)
(if (= pid pytest-pid)
(unless (zero? status)
(error "`pytest' exited with status"
status))
(loop)))))))))))))
(native-inputs
(list dbus python-pytest upower which))
(inputs
(list dbus))
(propagated-inputs
(list python-dbus-python python-pygobject))
(home-page "https://github.com/martinpitt/python-dbusmock")
(synopsis "Python library for mock D-Bus objects")
(description "python-dbusmock allows for the easy creation of mock objects on
D-Bus. This is useful for writing tests for software which talks to D-Bus
services such as upower, systemd, logind, gnome-session or others, and it is
hard (or impossible without root privileges) to set the state of the real
services to what you expect in your tests.")
(license license:lgpl3+)))
(define-public python-dbusmock-minimal
(package
(inherit python-dbusmock)
(name "python-dbusmock-minimal")
(arguments
(substitute-keyword-arguments (package-arguments python-dbusmock)
((#:tests? _ #t) #f)))
(native-inputs (list which))
(properties '((hidden? . #t)))))
(define-public python-jsonplus
(package
(name "python-jsonplus")
(version "0.8.0")
(home-page "https://github.com/randomir/jsonplus")
(source (origin
(method url-fetch)
(uri (pypi-uri "jsonplus" version))
(sha256
(base32
"05yv3dw813zwas9snz124k2hki49y268b3mx0gj9w7v1nrjmglq1"))))
(build-system python-build-system)
;; XXX: No tests on PyPI, and the repository has no tags.
(arguments '(#:tests? #f))
(propagated-inputs
(list python-dateutil python-simplejson python-sortedcontainers))
(synopsis "Serialize Python types to/from JSON")
(description
"This package provides functionality to serialize arbitrary data types
to and from JSON. Common data types are implemented and it is easy to
register custom encoders and decoders.")
(license license:expat)))
(define-public python-ujson
(package
(name "python-ujson")
(version "5.7.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ujson" version))
(sha256
(base32
"08vvyfyg4qvjy2vxrvc0qix5zmd0j6wd0icvmhc633xfvkayb277"))
(modules '((guix build utils)))
(snippet
'(begin (delete-file-recursively "deps") #t))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'link-to-system-double-conversion
(lambda* (#:key inputs #:allow-other-keys)
(let ((d-c (assoc-ref inputs "double-conversion")))
(substitute* "setup.py"
(("./deps/double-conversion/double-conversion\"")
(string-append d-c "/include/double-conversion\""))
(("-lstdc++" stdc)
(string-append "-L" d-c "/lib\","
" \"-ldouble-conversion\","
" \"" stdc)))
#t)))
(replace 'check
(lambda* (#:key inputs outputs #:allow-other-keys)
(add-installed-pythonpath inputs outputs)
(invoke "pytest"))))))
(native-inputs
(list double-conversion python-setuptools-scm python-pytest))
(home-page "https://github.com/ultrajson/ultrajson")
(synopsis "Ultra fast JSON encoder and decoder for Python")
(description
"UltraJSON is an ultra fast JSON encoder and decoder written in pure C with
bindings for Python 3.")
(license license:bsd-3)))
(define-public python-iocapture
;; The latest release is more than a year older than this commit.
(let ((commit "fdc021c431d0840303908dfc3ca8769db383595c")
(revision "1"))
(package
(name "python-iocapture")
(version "0.1.2")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/oinume/iocapture")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"1mkbhqibxvgwg0p7slr8dfraa3g2s6bsayladhax2jccwj4kcndz"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(delete 'check)
(add-after 'install 'check
(lambda* (#:key inputs outputs #:allow-other-keys)
(add-installed-pythonpath inputs outputs)
(invoke "py.test" "-v" "tests")
#t)))))
(propagated-inputs
(list python-flexmock python-pytest python-pytest-cov python-six))
(home-page "https://github.com/oinume/iocapture")
(synopsis "Python capturing tool for stdout and stderr")
(description
"This package helps you to capture the standard out (stdout) and the
standard error channel (stderr) in your program.")
(license license:expat))))
(define-public python-anyio
(package
(name "python-anyio")
(version "3.6.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "anyio" version))
(sha256
(base32
"08bljjq5xq0l9id36q3vvjgygirq7g7q2bs41hdg82p379khvsi5"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke
"pytest" "-vv" "-p" "no:asyncio"
"-m" "not network"
"-k"
(string-append
"not test_is_block_device"
;; These fail because of network (or specifically IPv6
;; network) access (see:
;; https://github.com/agronholm/anyio/issues/417).
" and not test_accept"
" and not test_accept_after_close"
" and not test_close_during_receive"
" and not test_close_from_other_task"
" and not test_concurrent_receive"
" and not test_concurrent_send"
" and not test_connect_tcp_with_tls"
" and not test_connect_tcp_with_tls_cert_check_fail"
" and not test_connection_refused"
" and not test_extra_attributes"
" and not test_getaddrinfo"
" and not test_getnameinfo"
" and not test_happy_eyeballs"
" and not test_iterate"
" and not test_receive_after_close"
" and not test_receive_timeout"
" and not test_reuse_port"
" and not test_run_process"
" and not test_send_after_close"
" and not test_send_after_eof"
" and not test_send_after_peer_closed"
" and not test_send_eof"
" and not test_send_large_buffer"
" and not test_send_receive"
" and not test_socket_options"
" and not test_unretrieved_future_exception_server_crash"))))))))
(propagated-inputs
(list python-contextvars
python-dataclasses
python-idna
python-sniffio
python-typing-extensions))
(native-inputs
(list python-contextlib2
python-coverage
python-hypothesis
python-mock
python-pytest
python-pytest-mock
python-setuptools-scm
python-trio
python-trustme
python-uvloop))
(home-page "https://github.com/agronholm/anyio")
(synopsis "Compatibility layer for multiple asynchronous event loops")
(description
"AnyIO is an asynchronous networking and concurrency library that works
on top of either asyncio or trio. It implements trio-like structured
concurrency on top of asyncio, and works in harmony with the native SC of trio
itself.")
(license license:expat)))
(define-public python-argh
;; There are 21 commits since the latest release containing important
;; improvements.
(let ((commit "dcd3253f2994400a6a58a700c118c53765bc50a4")
(revision "1"))
(package
(name "python-argh")
(version (git-version "0.26.2" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/neithere/argh")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"1p5h3dnpbsjmqrvil96s71asc6i3gpinmbrabqmwnrsxprz7r3ns"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch-tests
(lambda _
;; Fix test failures on Python 3.9.9+.
;; Taken via <https://github.com/neithere/argh/issues/148>.
(substitute* "test/test_integration.py"
(("assert run\\(p, '(bar|orig-name|nest bar)', exit=True\\)\
\\.startswith\\('invalid choice'\\)" _ name)
(string-append "assert 'invalid choice' in \
run(p, '" name "', exit=True)")))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv")))))))
(propagated-inputs
(list python-iocapture python-mock python-pytest python-pytest-cov
python-pytest-xdist))
(home-page "https://github.com/neithere/argh/")
(synopsis "Argparse wrapper with natural syntax")
(description
"python-argh is a small library that provides several layers of
abstraction on top of @code{python-argparse}. The layers can be mixed. It is
always possible to declare a command with the highest possible (and least
flexible) layer and then tune the behaviour with any of the lower layers
including the native API of @code{python-argparse}.")
(license license:lgpl3+))))
(define-public python-ppft
(package
(name "python-ppft")
(version "1.6.6.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ppft" version))
(sha256
(base32
"1z1invkhszc5d2mvgr221v7cszzifcc77mz0pv3wjp6x5q2768cy"))))
(build-system python-build-system)
(arguments '(#:tests? #f)) ; there are none
(propagated-inputs
(list python-six))
(home-page "https://pypi.org/project/ppft/")
(synopsis "Fork of Parallel Python")
(description
"This package is a fork of Parallel Python. The Parallel Python
module (@code{pp}) provides an easy and efficient way to create
parallel-enabled applications for @dfn{symmetric multiprocessing} (SMP)
computers and clusters. It features cross-platform portability and dynamic
load balancing.")
(license license:bsd-3)))
(define-public python-pox
(package
(name "python-pox")
(version "0.2.7")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pox" version))
(sha256
(base32
"0y17ckc2p6i6709s279sjdj4q459mpcc38ymg9zv9y6vl6jf3bq6"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(mkdir-p "/tmp/guix")
(setenv "SHELL" "bash")
(setenv "USERNAME" "guix")
(setenv "HOME" "/tmp/guix") ; must end on USERNAME...
(invoke "py.test" "-vv")
#t)))))
(native-inputs
(list python-pytest which))
(home-page "https://pypi.org/project/pox/")
(synopsis "Python utilities for file system exploration and automated builds")
(description
"Pox provides a collection of utilities for navigating and manipulating
file systems. This module is designed to facilitate some of the low-level
operating system interactions that are useful when exploring a file system on a
remote host. Pox provides Python equivalents of several shell commands such
as @command{which} and @command{find}. These commands allow automated
discovery of what has been installed on an operating system, and where the
essential tools are located.")
(license license:bsd-3)))
(define-public python-pathos
(package
(name "python-pathos")
(version "0.2.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pathos" version))
(sha256
(base32
"0in8hxdz7k081ijn6q94gr39ycy7363sx4zysmbwyvd7snqjrbi1"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "python" "./tests/__main__.py"))))))
(propagated-inputs
(list python-dill python-multiprocess python-pox python-ppft))
(native-inputs
(list python-pytest))
(home-page "https://pypi.org/project/pathos/")
(synopsis
"Parallel graph management and execution in heterogeneous computing")
(description
"Python-pathos is a framework for heterogeneous computing. It provides a
consistent high-level interface for configuring and launching parallel
computations across heterogeneous resources. Python-pathos provides configurable
launchers for parallel and distributed computing, where each launcher contains
the syntactic logic to configure and launch jobs in an execution environment.")
(license license:bsd-3)))
(define-public python-flit
(package
(name "python-flit")
(version "3.8.0") ;same as python-flit-core
(source
(origin
(method url-fetch)
(uri (pypi-uri "flit" version))
(sha256
(base32 "0dz9sp2zlhkmk6sm5gapbbb30f7xq3n3jn5zxx5pkp25ppsaiwnh"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
;; These tests fail when FLIT_NO_NETWORK is set
'(list "-k" "not test_invalid_classifier \
and not test_install_requires \
and not test_install_requires_extra \
and not test_validate_classifiers_private")
#:phases
#~(modify-phases %standard-phases
(add-before 'check 'pre-check
(lambda* (#:key tests? inputs outputs #:allow-other-keys)
(when tests?
(setenv "HOME" "/tmp")
(setenv "FLIT_NO_NETWORK" "1")))))))
(propagated-inputs
(list python-pypa-build
python-tomli-w
python-flit-core
python-docutils
python-requests))
(native-inputs
(list python-responses
python-pygments-github-lexers
python-pytest
python-pytest-cov
python-sphinx
python-sphinxcontrib-github-alt
python-testpath))
(home-page "https://flit.readthedocs.io/")
(synopsis "Simple packaging tool for simple packages")
(description "Flit is a simple way to put Python packages and modules on
PyPI. Flit packages a single importable module or package at a time, using
the import name as the name on PyPI. All subpackages and data files within a
package are included automatically.")
(license license:bsd-3)))
(define-public python-pathtools
(package
(name "python-pathtools")
(version "0.1.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pathtools" version))
(sha256
(base32
"1h7iam33vwxk8bvslfj4qlsdprdnwf8bvzhqh3jq5frr391cadbw"))))
(build-system python-build-system)
(home-page
"https://github.com/gorakhargosh/pathtools")
(synopsis "Path utilities for Python")
(description "Pattern matching and various utilities for file systems
paths.")
(license license:expat)))
(define-public python-fastentrypoints
(package
(name "python-fastentrypoints")
(version "0.12")
(source
(origin
(method url-fetch)
(uri (pypi-uri "fastentrypoints" version))
(sha256
(base32
"02s1j8i2dzbpbwgq2a3fiqwm3cnmhii2qzc0k42l0rdxd4a4ya7z"))))
(build-system python-build-system)
(home-page
"https://github.com/ninjaaron/fast-entry_points")
(synopsis
"Makes entry_points specified in setup.py load more quickly")
(description
"Using entry_points in your setup.py makes scripts that start really
slowly because it imports pkg_resources. This package allows such setup
scripts to load entry points more quickly.")
(license license:bsd-3)))
(define-public python-funcparserlib
(package
(name "python-funcparserlib")
(version "1.0.1")
(source
(origin
;; Source tarball on PyPi lacks tests.
(method git-fetch)
(uri (git-reference
(url "https://github.com/vlasovskikh/funcparserlib")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "0dw3i4fyf3j9h1l7xfgs99fc2w2axk6xqk0sdag43k444ss4hkrc"))))
(build-system pyproject-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "python" "-m" "unittest" "discover" "-v")))))))
;; ModuleNotFoundError: No module named 'poetry'
(native-inputs (list python-poetry-core))
(home-page "https://github.com/vlasovskikh/funcparserlib")
(synopsis
"Recursive descent parsing library based on functional combinators")
(description
"This package is a recursive descent parsing library for Python based on
functional combinators. Parser combinators are just higher-order functions
that take parsers as their arguments and return them as result values.")
(license license:expat)))
(define-public python-speg
(package
(name "python-speg")
(version "0.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "speg" version ".zip"))
(sha256
(base32 "0w9y4jf4787dzhy6rvhwi0mpl0r8qkqmqmyv2hpwdpv8w53yzjqh"))))
(arguments
`(#:tests? #f)) ;FIXME: tests fail, not sure why
(native-inputs
(list unzip))
(build-system python-build-system)
(home-page "https://github.com/avakar/speg")
(synopsis "PEG-based parser interpreter with memoization")
(description "This package is a PEG-based parser and interpreter with
memoization.")
(license license:expat)))
(define-public python-cson
(package
(name "python-cson")
(version "0.8")
(source
(origin
(method url-fetch)
(uri (pypi-uri "cson" version))
(sha256
(base32 "00cyvigg4npbph39ghkg77xbxisa6plf75vii24igxfizik0337f"))))
(build-system python-build-system)
(propagated-inputs
(list python-speg))
(home-page "https://github.com/avakar/pycson")
(synopsis "Parser for Coffeescript Object Notation (CSON)")
(description "This package is a parser for Coffeescript Object
Notation (CSON).")
(license license:expat)))
(define-public python-aionotify
(package
(name "python-aionotify")
(version "0.2.0")
(source
(origin
;; Source tarball on PyPi lacks tests
(method git-fetch)
(uri (git-reference
(url "https://github.com/rbarrois/aionotify")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1sk9i8czxgsbrswsf1nlb4c82vgnlzi8zrvrxdip92w2z8hqh43y"))
(patches (search-patches "python-aionotify-0.2.0-py3.8.patch"))))
(build-system python-build-system)
(home-page "https://github.com/rbarrois/aionotify")
(synopsis "Asyncio-powered inotify library")
(description
"@code{aionotify} is a simple, asyncio-based inotify library.")
(license license:bsd-3)))
(define-public python-forbiddenfruit
(package
(name "python-forbiddenfruit")
(version "0.1.3")
(source
(origin
;; Source tarball on PyPi lacks Makefile that builds and runs tests
(method git-fetch)
(uri (git-reference
(url "https://github.com/clarete/forbiddenfruit")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "1fp2xvdqpi910j9r3q68x38phpxbm700gjdi2m2j5gs91xdnyyh2"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "make" "SKIP_DEPS=1"))))))
(native-inputs
(list python-nose python-coverage))
(home-page "https://github.com/clarete/forbiddenfruit")
(synopsis "Patch python built-in objects")
(description "This project allows Python code to extend built-in types.")
(license (list license:gpl3+ license:expat))))
(define-public python-k5test
(package
(name "python-k5test")
(version "0.10.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "k5test" version))
(sha256
(base32
"07sp9hc6nkbgzywvr2ivcik03wibs6gmxm1k33l1b8v3mnyfx7cw"))))
(build-system python-build-system)
(propagated-inputs
(list python-six
;; `which`, `kadmin.local` binaries called inside library
which mit-krb5))
(native-inputs (list mit-krb5))
(arguments
'(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'apply-upstream-fixes
(lambda* _
(substitute* "k5test/realm.py"
;; Upstream commit f6b302d94dbdce37a1b81cc3faeeac4dc637b0e9.
(("'kadmin_local'") "'kadmin.local'")
;; Upstream commit 3aef84515cf3d1a171c66856c898d0a5cbbd03ea.
(("\\.stop_daemon") "._stop_daemon")))))))
(home-page "https://github.com/pythongssapi/k5test")
(synopsis "Library for setting up self-contained Kerberos 5 environments")
(description
"@code{k5test} is a library for setting up self-contained Kerberos 5
environments, and running Python unit tests inside those environments. It is
based on the file of the same name found alongside the MIT Kerberos 5 unit
tests.")
(license license:isc)))
(define-public python-gssapi
(package
(name "python-gssapi")
(version "1.8.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "gssapi" version))
(sha256
(base32
"16n86nr19s95czvc1a9mdhs1kiq77qkcjp2c1rk5h4f93h10m3mp"))))
(build-system python-build-system)
(propagated-inputs
(list python-decorator python-six))
(inputs
(list mit-krb5))
;; for tests
(native-inputs
(list python-parameterized python-k5test python-nose
python-cython))
(home-page "https://github.com/pythongssapi/python-gssapi")
(synopsis "Python GSSAPI Wrapper")
(description
"Python-GSSAPI provides both low-level and high level wrappers around the
GSSAPI C libraries. While it focuses on the Kerberos mechanism, it should
also be usable with other GSSAPI mechanisms.")
(license license:isc)))
(define-public python-check-manifest
(package
(name "python-check-manifest")
(version "0.49")
(source
(origin
(method url-fetch)
(uri (pypi-uri "check-manifest" version))
(sha256
(base32
"05plc1835zz1w1k7wpf2n6jir71ds1w7nz3535lj5ks2am2419k4"))))
(build-system pyproject-build-system)
(arguments
'(;; This test requires setting up a venv which does not work
;; properly in the build environment.
#:test-flags '("-k" "not test_build_sdist_pep517_isolated")
#:phases
(modify-phases %standard-phases
;; Tests use git submodule commands over the file transport, which
;; has been disabled in git, see CVE-2022-39253. Enable these
;; commands to allow checks to succeed.
(add-before 'check 'allow-git-submodule-add
(lambda _
(setenv "HOME" "/tmp")
(invoke "git" "config" "--global"
"protocol.file.allow" "always"))))))
(native-inputs
(list git-minimal/pinned python-pytest))
(propagated-inputs
(list python-pypa-build python-setuptools))
(home-page "https://github.com/mgedmin/check-manifest")
(synopsis "Check MANIFEST.in in a Python source package for completeness")
(description "Python package can include a MANIFEST.in file to help with
sending package files to the Python Package Index. This package checks that
file to ensure it completely and accurately describes your project.")
(license license:expat)))
(define-public python-android-stringslib
(package
(name "python-android-stringslib")
(version "0.1.2")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://framagit.org/tyreunom/python-android-strings-lib")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0gij55qzzq1h83kfpvhai1vf78kkhyvxa6l17m2nl24454lhfin4"))))
(build-system python-build-system)
(arguments
`(#:tests? #f))
(home-page "https://framagit.org/tyreunom/python-android-strings-lib")
(synopsis "Android strings.xml support")
(description "Android Strings Lib provides support for android's strings.xml
files. These files are used to translate strings in android apps.")
(license license:expat)))
(define-public python-watchdog
(package
(name "python-watchdog")
(version "2.1.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "watchdog" version))
(sha256
(base32 "1rx2nyl0cyj0v4ja795cl3gi26577c5wg48syr3byz3ndkgpavm3"))))
(build-system pyproject-build-system)
(arguments
(list #:test-flags #~(list "-k" "not test_kill_auto_restart")))
(propagated-inputs
(list python-pathtools python-pyyaml))
(native-inputs
(list python-pytest-cov python-pytest-timeout))
(home-page "https://github.com/gorakhargosh/watchdog")
(synopsis "File system events monitoring")
(description "This package provides a way to monitor file system events
such as a file modification and trigger an action. This is similar to inotify,
but portable.")
(license license:asl2.0)))
(define-public python-watchgod
(package
(name "python-watchgod")
(version "0.8.1")
(source
(origin
;; There are no tests in the PyPI tarball.
(method git-fetch)
(uri (git-reference
(url "https://github.com/samuelcolvin/watchgod")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0zm9xd2qf3d74l67yv8j3zhhhvi0vp25vhkg46l9d7flh9m04qrp"))))
(build-system pyproject-build-system)
(arguments
(list #:test-flags '(list "-o" "asyncio_mode=auto"
;; PytestUnraisableExceptionWarning
"-k" "not test_watch_log and not test_awatch")))
(native-inputs
(list python-anyio
python-coverage
python-pygments
python-pytest
python-pytest-asyncio
python-pytest-cov
python-pytest-mock
python-pytest-sugar
python-pytest-toolbox))
(home-page "https://github.com/samuelcolvin/watchgod")
(synopsis "Simple, modern file watching and code reload in Python")
(description
"Simple, modern file watching and code reload in Python inspired by
@code{watchdog}. Among the differences are a unified approach for each
operating systems and an elegant approach to concurrency using threading.")
(license license:expat)))
(define-public python-wget
(package
(name "python-wget")
(version "3.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "wget" version ".zip"))
(sha256
(base32
"0qb0y7ipby42m4m7h0ipazpdyc3bn9xi46lvifcwwl5albn31rim"))))
(build-system python-build-system)
(native-inputs (list unzip))
(home-page "https://bitbucket.org/techtonik/python-wget/")
(synopsis "Pure Python download utility")
(description "The python-wget library provides an API to download files
with features similar to the @command{wget} utility.")
(license license:unlicense)))
(define-public offlate
(package
(name "offlate")
(version "0.6.1")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://framagit.org/tyreunom/offlate")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"1sx5cv8pamyw1m089b6x8ykaxdkx26jk9cblhbzlf0m3ckz52jik"))))
(build-system python-build-system)
(arguments
;; No tests
`(#:tests? #f
#:phases
(modify-phases %standard-phases
(add-before 'build 'generate-fonts
(lambda _
(invoke "make" "fonts")))
(add-before 'build 'generate-translations
(lambda _
(invoke "make" "update-langs"))))))
(propagated-inputs
(list python-android-stringslib
python-dateutil
python-gitlab
python-lxml
python-polib
python-pycountry
python-pyenchant
python-pygit2
python-pygithub
python-pyqt
python-requests
python-ruamel.yaml
python-translate-toolkit
python-translation-finder
python-watchdog))
(native-inputs
(list qttools-5 fontforge))
(home-page "https://framagit.org/tyreunom/offlate")
(synopsis "Offline translation interface for online translation tools")
(description "Offlate offers a unified interface for different translation
file formats, as well as many different online translation platforms. You can
use it to get work from online platforms, specialized such as the Translation
Project, or not such a gitlab instance when your upstream doesn't use any
dedicated platform. The tool proposes a unified interface for any format and
an upload option to send your work back to the platform.")
(license license:gpl3+)))
(define-public python-titlecase
(package
(name "python-titlecase")
(version "2.4.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "titlecase" version))
(sha256
(base32
"1x9myq3rlbw6wh946ncch8px7wyabhzacy2fjji13nmvrivs50vx"))))
(build-system python-build-system)
(home-page "https://github.com/ppannuto/python-titlecase")
(synopsis "Capitalize strings similar to book titles")
(description
"Python-Titlecase is a Python port of John Gruber's titlecase.pl.
It capitalizes (predominantly English) strings in a way that is similar to
book titles, using the New York Times Manual of Style to leave certain words
lowercase.")
(license license:expat)))
(define-public python-pypng
(package
(name "python-pypng")
(version "0.20220715.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pypng" version))
(sha256
(base32 "1hg24zja235bkbny82hx7sy7qlzfbabxph2lvqaq61vgm4xl773k"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
'(modify-phases %standard-phases
(add-before 'check 'pre-check
(lambda _
(setenv "PYTHONPATH"
(string-append (getcwd) "/code:"
(getenv "GUIX_PYTHONPATH"))))))))
(native-inputs (list python-pytest))
(home-page "https://github.com/drj11/pypng")
(synopsis "Pure Python PNG image encoder/decoder")
(description
"The PyPNG module implements support for PNG images. It reads and writes
PNG files with all allowable bit depths (1/2/4/8/16/24/32/48/64 bits per
pixel) and colour combinations: greyscale (1/2/4/8/16 bit); RGB, RGBA,
LA (greyscale with alpha) with 8/16 bits per channel; colour mapped
images (1/2/4/8 bit). Adam7 interlacing is supported for reading and writing.
A number of optional chunks can be specified (when writing) and
understood (when reading): tRNS, bKGD, gAMA.
PyPNG is not a high level toolkit for image processing (like PIL) and does not
aim at being a replacement or competitor. Its strength lies in fine-grained
extensive support of PNG features. It can also read and write Netpbm PAM
files, with a focus on its use as an intermediate format for implementing
custom PNG processing.")
(license license:expat)))
(define-public python-fuzzywuzzy
(package
(name "python-fuzzywuzzy")
(version "0.18.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "fuzzywuzzy" version))
(sha256
(base32
"1s00zn75y2dkxgnbw8kl8dw4p1mc77cv78fwfa4yb0274s96w0a5"))))
(build-system python-build-system)
(native-inputs
(list python-hypothesis python-pycodestyle python-pytest))
(propagated-inputs
(list python-levenshtein))
(home-page "https://github.com/seatgeek/fuzzywuzzy")
(synopsis "Fuzzy string matching in Python")
(description "Approximate string matching using
@emph{Levenshtein Distance} to calculate the differences between
sequences.")
(license license:gpl2)))
(define-public python-block-tracing
(package
(name "python-block-tracing")
(version "1.0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "block_tracing" version))
(sha256
(base32
"0s2y729qr5rs7n506qfh8cssk8m2bi6k2y5vbrh2z3raf2d01alz"))))
(build-system python-build-system)
(arguments '(#:tests? #f)) ; no tests
(home-page "https://github.com/rianhunter/block_tracing")
(synopsis "Protect process memory")
(description
"@code{block_tracing} is a tiny Python library that can be used to
prevent debuggers and other applications from inspecting the memory within
your process.")
(license license:expat)))
(define-public python-gcovr
(package
(name "python-gcovr")
(version "4.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "gcovr" version))
(sha256
(base32
"0gyady7x3v3l9fm1zan0idaggqqcm31y7g5vxk7h05p5h7f39bjs"))))
(build-system python-build-system)
(propagated-inputs
(list python-lxml python-jinja2))
(home-page "https://gcovr.com/")
(synopsis "Utility for generating code coverage results")
(description
"Gcovr provides a utility for managing the use of the GNU gcov
utility and generating summarized code coverage results. It is inspired
by the Python coverage.py package, which provides a similar utility for
Python.")
(license license:bsd-3)))
(define-public python-owslib
(package
(name "python-owslib")
(version "0.19.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "OWSLib" version))
(sha256
(base32 "0v8vg0naa9rywvd31cpq65ljbdclpsrx09788v4xj7lg10np8nk0"))))
(build-system python-build-system)
(arguments
;; TODO: package dependencies required for tests.
'(#:tests? #f
#:phases (modify-phases %standard-phases
(delete 'sanity-check))))
(synopsis "Interface for Open Geospatial Consortium web service")
(description
"OWSLib is a Python package for client programming with Open Geospatial
Consortium (OGC) web service (hence OWS) interface standards, and their related
content models.")
(home-page "https://geopython.github.io/OWSLib/")
(license license:bsd-3)))
(define-public python-docusign-esign
(package
(name "python-docusign-esign")
(version "3.1.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "docusign_esign" version))
(sha256
(base32
"01f3h03vc97syjlmqyl7xa5j90pzgmwpspc5a0gra9saynnbkx37"))))
(build-system python-build-system)
;; Testing requires undocumented setup changes, and so testing is disabled here.
(arguments `(#:tests? #f))
(propagated-inputs
(list python-certifi
python-six
python-dateutil
python-urllib3
python-pyjwt
python-cryptography
python-nose))
(synopsis "DocuSign Python Client")
(description "The Official DocuSign Python Client Library used to interact
with the eSign REST API. Send, sign, and approve documents using this client.")
(home-page "https://www.docusign.com/devcenter")
(license license:expat)))
(define-public python-xattr
(package
(name "python-xattr")
(version "0.9.9")
(source
(origin
(method url-fetch)
(uri (pypi-uri "xattr" version))
(sha256
(base32
"0ipkfblyvp5hylahjkw9zss1ii9xnwjypr3b3ncv989szcg7xjq9"))))
(build-system python-build-system)
(propagated-inputs
(list python-cffi))
(home-page "https://github.com/xattr/xattr")
(synopsis
"Python wrapper for extended file system attributes")
(description "This package provides a Python wrapper for using extended
file system attributes. Extended attributes extend the basic attributes of files
and directories in the file system. They are stored as name:data pairs
associated with file system objects (files, directories, symlinks, etc).")
(license license:expat)))
(define-public python-json-logger
(package
(name "python-json-logger")
(version "0.1.11")
(source
(origin
(method url-fetch)
(uri (pypi-uri "python-json-logger" version))
(sha256
(base32
"10g2ya6nsvn5vxzvq2wb8q4d43i3d7756i5rxyjna6d0y9i138xp"))))
(build-system python-build-system)
(home-page
"https://github.com/madzak/python-json-logger")
(synopsis "JSON log formatter in Python")
(description "This library allows standard Python logging to output log data
as JSON objects. With JSON we can make our logs more readable by machines and
we can stop writing custom parsers for syslog-type records.")
(license license:bsd-3)))
(define-public python-daiquiri
(package
(name "python-daiquiri")
(version "2.1.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "daiquiri" version))
(sha256
(base32
"1qmank3c217ddiig3xr8ps0mqaydcp0q5a62in9a9g4zf72zjnqd"))))
(build-system python-build-system)
(propagated-inputs
(list python-json-logger))
(native-inputs
(list python-mock python-pytest python-setuptools-scm python-six))
(home-page "https://github.com/jd/daiquiri")
(synopsis
"Library to configure Python logging easily")
(description "The daiquiri library provides an easy way to configure
logging in Python. It also provides some custom formatters and handlers.")
(license license:asl2.0)))
(define-public python-pifpaf
(package
(name "python-pifpaf")
(version "3.1.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pifpaf" version))
(sha256
(base32
"19bdmxldc2m570isl7hbqgbb20si4sin7pi5fw8sv9py8dyv2s4n"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "python" "setup.py" "testr" "--slowest"
"--testr-args=until-failure"))))))
(propagated-inputs
(list python-click
python-daiquiri
python-fixtures
python-jinja2
python-pbr
python-psutil
python-xattr))
(native-inputs
(list python-mock python-os-testr python-requests
python-testrepository python-testtools))
(home-page "https://github.com/jd/pifpaf")
(synopsis "Tools and fixtures to manage daemons for testing in Python")
(description "Pifpaf is a suite of fixtures and a command-line tool that
starts and stops daemons for a quick throw-away usage. This is typically
useful when needing these daemons to run integration testing. It originally
evolved from its precursor @code{overtest}.")
(license license:asl2.0)))
(define-public python-pytest-check-links
(package
(name "python-pytest-check-links")
(version "0.3.0")
(source
(origin
(method url-fetch)
;; URI uses underscores
(uri (pypi-uri "pytest_check_links" version))
(sha256
(base32
"12x3wmrdzm6wgk0vz02hb769h68nr49q47w5q1pj95pc89hsa34v"))))
(build-system python-build-system)
(propagated-inputs
(list python-docutils
python-html5lib
python-nbconvert
python-nbformat
python-pytest
python-six))
(native-inputs
(list python-pbr-minimal))
(home-page "https://github.com/minrk/pytest-check-links")
(synopsis "Check links in files")
(description "This package provides a pytest plugin that checks URLs for
HTML-containing files.")
(license license:bsd-3)))
(define-public python-json5
(package
(name "python-json5")
(version "0.8.5")
(source
(origin
;; sample.json5 is missing from PyPi source tarball
(method git-fetch)
(uri (git-reference
(url "https://github.com/dpranke/pyjson5")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0nyngj18jlkgvm1177lc3cj47wm4yh3dqigygvcvw7xkyryafsqn"))))
(build-system python-build-system)
(home-page "https://github.com/dpranke/pyjson5")
(synopsis
"Python implementation of the JSON5 data format")
(description
"JSON5 extends the JSON data interchange format to make it slightly more
usable as a configuration language. This Python package implements parsing and
dumping of JSON5 data structures.")
(license license:asl2.0)))
(define-public python-farama-notifications
(package
(name "python-farama-notifications")
(version "0.0.4")
(source
;; The version on pypi does not include tests.
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/Farama-Foundation/Farama-Notifications")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "1k1x48xpvhankw7vbjp20ljwran247aphc2qncqrxivrkgzwjjji"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
'(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "python3" "tests/ci-test.py")))))))
(native-inputs (list python-pytest))
(home-page "https://github.com/Farama-Foundation/Farama-Notifications")
(synopsis "Notifications for all Farama Foundation maintained libraries")
(description
"This package allows for providing notifications for all Farama
Foundation maintained libraries.")
(license license:expat)))
(define-public python-freetype-py
(package
(name "python-freetype-py")
(version "2.3.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "freetype-py" version ".zip"))
(sha256
(base32 "1l55wzy21jmdayjna29ahzxrf2fp68580978rs6kap1a4zilrdpr"))))
(build-system python-build-system)
(native-inputs
(list python-setuptools-scm
unzip))
(inputs (list freetype))
(arguments
`(#:phases
;; Note: the pypi archive does not contain tests, but running the check
;; phase will at least test whether the module loads correctly.
(modify-phases %standard-phases
(add-before 'build 'embed-library-reference
(lambda* (#:key inputs #:allow-other-keys)
(substitute* "freetype/raw.py"
(("^(filename = ).*" _ >)
(string-append > "\"" (search-input-file inputs "/lib/libfreetype.so")
"\"\n"))))))))
(home-page "https://github.com/rougier/freetype-py")
(synopsis "Freetype python bindings")
(description "Freetype Python provides bindings for the FreeType
library. Only the high-level API is bound.")
(license license:bsd-3)))
(define-public python-frozendict
(package
(name "python-frozendict")
(version "2.3.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "frozendict" version))
(sha256
(base32 "0y3zn57i1q5192f7l4w2z2zsy3rrx50g563msaq954r58s1v3d0m"))))
(build-system python-build-system)
(home-page "https://github.com/Marco-Sulla/python-frozendict")
(synopsis "Simple immutable mapping for Python")
(description
"@dfn{frozendict} is an immutable wrapper around dictionaries that
implements the complete mapping interface. It can be used as a drop-in
replacement for dictionaries where immutability is desired.")
(license license:expat)))
(define-public python-unpaddedbase64
(package
(name "python-unpaddedbase64")
(version "2.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "unpaddedbase64" version))
(sha256
(base32 "01ghlmw63fgslwj8j74vkpf1kqvr7a4agm6nyn89vqwx106ccwvj"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key inputs tests? #:allow-other-keys)
(when tests?
(copy-recursively (string-append
(assoc-ref inputs "tests") "/tests")
"tests")
(invoke "python" "-m" "pytest" "-vv")))))))
(native-inputs
`(("python-pytest" ,python-pytest)
("tests"
;; The release on pypi comes without tests. We can't build from this
;; checkout, though, because installation requires an invocation of
;; poetry.
,(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/matrix-org/python-unpaddedbase64")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1n6har8pxv0mqb96lanzihp1xf76aa17jw3977drb1fgz947pnmz"))))))
(home-page "https://github.com/matrix-org/python-unpaddedbase64")
(synopsis "Encode and decode Base64 without “=” padding")
(description
"RFC 4648 specifies that Base64 should be padded to a multiple of 4 bytes
using “=” characters. However this conveys no benefit so many protocols
choose to use Base64 without the “=” padding.")
(license license:asl2.0)))
(define-public python-py-cpuinfo
;; This is the first commit where riscv64-linux support is available.
;; We can move back to pypi releases with the next release.
(let ((commit "4d6987e5c30f2ebacb20781892c01329042cce60")
(revision "1"))
(package
(name "python-py-cpuinfo")
(version (git-version "8.0.0" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/workhorsy/py-cpuinfo")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"0h5wi1bfcqqr1x3j1pa7dmkx7siprsyksbsy80fl2sdrrgpji0b0"))))
(build-system python-build-system)
(home-page "https://github.com/workhorsy/py-cpuinfo")
(synopsis "Get CPU info with Python")
(description
"This Python module returns the CPU info by using the best sources of
information for your operating system.")
(license license:expat))))
(define-public python-canonicaljson
(package
(name "python-canonicaljson")
(version "1.6.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "canonicaljson" version))
(sha256
(base32 "0j5lq191jkd483q6xzc16c9fahxf15lrv03mvah9ka3lq85pcnfa"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'loosen-requirements
(lambda _
;; Permit newer versions of setuptools_scm
(substitute* "pyproject.toml"
((">= 2.0.0, <3") ">= 2.0.0")))))))
(native-inputs
(list python-pypa-build python-pytest python-setuptools python-setuptools-scm))
(propagated-inputs
(list python-six python-frozendict python-simplejson))
(home-page "https://github.com/matrix-org/python-canonicaljson")
(synopsis "Canonical JSON")
(description
"Deterministically encode JSON.
@itemize
@item Encodes objects and arrays as RFC 7159 JSON.
@item Sorts object keys so that you get the same result each time.
@item Has no insignificant whitespace to make the output as small as possible.
@item Escapes only the characters that must be escaped, U+0000 to
U+0019 / U+0022 / U+0056, to keep the output as small as possible.
@item Uses the shortest escape sequence for each escaped character.
@item Encodes the JSON as UTF-8.
@item Can encode frozendict immutable dictionaries.
@end itemize")
(license license:asl2.0)))
(define-public python-signedjson
(package
(name "python-signedjson")
(version "1.1.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "signedjson" version))
(sha256
(base32 "0280f8zyycsmd7iy65bs438flm7m8ffs1kcxfbvhi8hbazkqc19m"))))
(build-system python-build-system)
(propagated-inputs
(list python-canonicaljson python-importlib-metadata python-pynacl
python-typing-extensions python-unpaddedbase64))
(native-inputs
(list python-setuptools-scm))
(home-page "https://github.com/matrix-org/python-signedjson")
(synopsis "Sign JSON objects with ED25519 signatures")
(description
"Sign JSON objects with ED25519 signatures.
@itemize
@item More than one entity can sign the same object.
@item Each entity can sign the object with more than one key making it easier to
rotate keys
@item ED25519 can be replaced with a different algorithm.
@item Unprotected data can be added to the object under the @dfn{\"unsigned\"}
key.
@end itemize")
(license license:asl2.0)))
(define-public python-daemonize
(package
(name "python-daemonize")
(version "2.5.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "daemonize" version))
(sha256
(base32 "1hwbl3gf9fdds9sc14zgjyjisjvxidrvqc11xlbb0b6jz17nw0nx"))))
(build-system python-build-system)
(home-page "https://github.com/thesharp/daemonize")
(synopsis "Library for writing system daemons in Python")
(description "Daemonize is a library for writing system daemons in Python.")
(license license:expat)))
(define-public python-pymacaroons
(package
(name "python-pymacaroons")
(version "0.13.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pymacaroons" version))
(sha256
(base32 "1f0357a6g1h96sk6wy030xmc1p4rd80a999qvxd28v7nlm1blsqy"))))
(build-system python-build-system)
(propagated-inputs
(list python-six python-pynacl))
(home-page "https://github.com/ecordell/pymacaroons")
(synopsis "Python Macaroon Library")
(description
"Macaroons, like cookies, are a form of bearer credential. Unlike opaque
tokens, macaroons embed caveats that define specific authorization
requirements for the target service, the service that issued the root macaroon
and which is capable of verifying the integrity of macaroons it receives.
Macaroons allow for delegation and attenuation of authorization. They are
simple and fast to verify, and decouple authorization policy from the
enforcement of that policy.")
(license license:expat)))
(define-public python-ldap3
(package
(name "python-ldap3")
(version "2.7")
(home-page "https://github.com/cannatag/ldap3")
(source
(origin
(method git-fetch)
(uri (git-reference (url home-page)
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0xw9fkqld21xsvdpaqir8ccc2l805xnn9gxahsnl70xzp3mwl0xv"))))
(build-system python-build-system)
(arguments
'(#:tests? #f ;TODO: Tests need a real LDAP server to run
#:phases (modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "nosetests" "-s" "test"))
#t)))))
(native-inputs
(list python-nose))
(propagated-inputs
(list python-gssapi python-pyasn1))
(synopsis "Python LDAP client")
(description
"LDAP3 is a strictly RFC 4510 conforming LDAP V3 pure Python client
library.")
(license license:lgpl3+)))
(define-public python-boltons
(package
(name "python-boltons")
(version "23.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "boltons" version))
(sha256
(base32
"1c5lpqi74i55li0wvpyxnircj40na797x7447k53an2j54cafl4c"))))
(build-system python-build-system)
(home-page "https://github.com/mahmoud/boltons")
(synopsis "Extensions to the Python standard library")
(description
"Boltons is a set of over 230 pure-Python utilities in the same spirit
as — and yet conspicuously missing from — the standard library, including:
@itemize
@item Atomic file saving, bolted on with fileutils
@item A highly-optimized OrderedMultiDict, in dictutils
@item Two types of PriorityQueue, in queueutils
@item Chunked and windowed iteration, in iterutils
@item Recursive data structure iteration and merging, with iterutils.remap
@item Exponential backoff functionality, including jitter, through
iterutils.backoff
@item A full-featured TracebackInfo type, for representing stack traces, in
tbutils
@end itemize")
(license license:bsd-3)))
(define-public python-eliot
(package
(name "python-eliot")
(version "1.13.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "eliot" version))
(sha256
(base32 "1xzzhsjrrw430dc84vamf683bwp9i0nr86xf2iav6yla615ijq2p"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'remove-journald-support
(lambda _
(for-each delete-file
'("eliot/tests/test_journald.py"
"eliot/journald.py"))
#t))
(add-after 'remove-journald-support 'remove-eliot-prettyprint-tests
;; remove command-line tool's tests. TODO eliot-prettyprint should
;; be installed and these tests should pass.
(lambda _
(delete-file "eliot/tests/test_prettyprint.py")
#t))
(add-after 'remove-eliot-prettyprint-tests 'remove-failing-tests
(lambda _
;; These tests started to fail after updating python-pandas to
;; 1.3.3 and python-dask to 2021.9.1.
(substitute* "eliot/tests/test_validation.py"
(("test_omitLoggerFromActionType")
"_test_omitLoggerFromActionType")
(("test_logCallsDefaultLoggerWrite")
"_test_logCallsDefaultLoggerWrite"))
#t)))))
(propagated-inputs
(list python-boltons python-pyrsistent python-six
python-zope-interface))
(native-inputs
(list python-black
python-coverage
python-dask
python-flake8
python-hypothesis
python-pytest
python-setuptools
python-sphinx
python-sphinx-rtd-theme
python-testtools
python-twine
python-twisted))
(home-page "https://github.com/itamarst/eliot/")
(synopsis "Eliot: the logging system that tells you why it happened")
(description
"@dfn{eliot} is a Python logging system that outputs causal chains of
actions: actions can spawn other actions, and eventually they either succeed
or fail. The resulting logs tell you the story of what your software did: what
happened, and what caused it.")
(license license:asl2.0)))
(define-public python-pem
(package
(name "python-pem")
(version "20.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pem" version))
(sha256
(base32
"1xh88ss279fprxnzd10dczmqwjhppbyvljm33zrg2mgybwd66qr7"))))
(build-system python-build-system)
(native-inputs
(list python-certifi
python-coverage
python-pretend
python-pyopenssl
python-pytest
python-sphinx
python-twisted))
(home-page "https://pem.readthedocs.io/")
(synopsis "Easy PEM file parsing in Python")
(description
"This package provides a Python module for parsing and splitting PEM files.")
(license license:expat)))
(define-public python-txsni
;; We need a few commits on top of 0.1.9 for compatibility with newer
;; Python and OpenSSL.
(let ((commit "5014c141a7acef63e20fcf6c36fa07f0cd754ce1")
(revision "0"))
(package
(name "python-txsni")
(version (git-version "0.1.9" revision commit))
(home-page "https://github.com/glyph/txsni")
(source
(origin
(method git-fetch)
(uri (git-reference (url home-page) (commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"0imfxx4yjj1lbq0n5ad45al3wvv4qv96sivnc1r51i66mxi658z8"))))
(build-system python-build-system)
(propagated-inputs
(list python-pyopenssl python-service-identity python-twisted))
(synopsis "Run TLS servers with Twisted")
(description
"This package provides an easy-to-use SNI endpoint for use
with the Twisted web framework.")
(license license:expat))))
(define-public python-txacme
(package
(name "python-txacme")
(version "0.9.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "txacme" version))
(sha256
(base32 "1cplx4llq7i508w6fgwjdv9di7rsz9k9irfmzdfbiz6q6a0ykf1d"))))
(build-system python-build-system)
(propagated-inputs
(list python-acme
python-attrs
python-eliot
python-josepy
python-pem
python-treq
python-twisted
python-txsni))
(native-inputs
(list python-fixtures
python-hypothesis
python-mock
python-service-identity
python-testrepository
python-testscenarios
python-testtools))
(home-page "https://github.com/twisted/txacme")
(synopsis "Twisted implexmentation of the ACME protocol")
(description
"ACME is Automatic Certificate Management Environment, a protocol that
allows clients and certificate authorities to automate verification and
certificate issuance. The ACME protocol is used by the free Let's Encrypt
Certificate Authority.
txacme is an implementation of the protocol for Twisted, the event-driven
networking engine for Python.")
(license license:expat)))
(define-public python-pysaml2
(package
(name "python-pysaml2")
(version "6.5.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pysaml2" version))
(sha256
(base32
"1xk2x0slz1f8cqv7vn77qx99xfd1mshhswiwrljk9m72w2m9iivd"))))
(build-system python-build-system)
(propagated-inputs
(list python-cryptography
python-dateutil
python-defusedxml
python-importlib-resources
python-pyopenssl
python-pytz
python-requests
python-six
python-xmlschema))
(home-page "https://idpy.org")
(synopsis "Python implementation of SAML Version 2 Standard")
(description
"PySAML2 is a pure python implementation of SAML Version 2 Standard.
It contains all necessary pieces for building a SAML2 service provider or
an identity provider. The distribution contains examples of both.
This package was originally written to work in a WSGI environment, but
there are extensions that allow you to use it with other frameworks.")
(license license:asl2.0)))
(define-public python-click-plugins
(package
(name "python-click-plugins")
(version "1.1.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "click-plugins" version))
(sha256
(base32 "0jr6bxj67vg988vkm6nz8jj98v9lg46bn49lkhak3n598jbrkas6"))))
(build-system python-build-system)
(native-inputs
(list python-pytest))
(propagated-inputs
(list python-click))
(synopsis "Extension for Click to register external CLI commands")
(description "This package provides n extension module for Click to
register external CLI commands via setuptools entry-points.")
(home-page "https://github.com/click-contrib/click-plugins")
(license license:bsd-3)))
(define-public python-diceware
(package
(name "python-diceware")
(version "0.9.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "diceware" version))
(sha256
(base32
"0klb0ysybzlh2wihvir82hgq62v0jjmlcqklwajyms7c0p529yby"))))
(build-system python-build-system)
(native-inputs
(list python-coverage python-pytest python-pytest-runner))
(home-page "https://github.com/ulif/diceware/")
(synopsis "Generates memorable passphrases")
(description "This package generates passphrases by concatenating words
randomly picked from wordlists. It supports several sources of
randomness (including real life dice) and different wordlists (including
cryptographically signed ones).")
(license license:gpl3+)))
(define-public python-dictdiffer
(package
(name "python-dictdiffer")
(version "0.9.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "dictdiffer" version))
(sha256
(base32
"0y3mk74qm2q9hsm37892i1wzn8bbdrvbs4nmnvqwq4z6pxgwzfhp"))))
(build-system python-build-system)
(arguments
;; XXX: The PyPI tarball lacks tests and the git repository
;; fails to determine version.
'(#:tests? #f))
(native-inputs
(list python-pytest-runner python-setuptools-scm))
(home-page "https://github.com/inveniosoftware/dictdiffer")
(synopsis "Diff and patch Python dictionary objects")
(description
"Dictdiffer is a Python module that helps you to diff and patch
dictionaries.")
(license license:expat)))
(define-public python-dictpath
(package
(name "python-dictpath")
(version "0.1.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "dictpath" version))
(sha256
(base32 "1n4hq4wbgaw59bbb16nhkgg5wk8sl4iw940vjrgx4xmifqxxw73m"))))
(build-system python-build-system)
(native-inputs (list python-pytest python-pytest-cov python-pytest-flake8))
(home-page "https://github.com/p1c2u/pathable")
(synopsis "Object-oriented path library for Python")
(description "This object-oriented dictionary path Python library enables
traversing resources like paths or accessing resources on demand with separate
accessor layer.")
(license license:asl2.0)))
(define-public pyzo
(package
(name "pyzo")
(version "4.16.0")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/pyzo/pyzo")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"18775dhd5z7l505khrh1vsv5w1x1icshv34av8bbhfj8dz8nvgx5"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'check 'fix-home-directory
(lambda _
;; Tests fail with "Permission denied: '/homeless-shelter'".
(setenv "HOME" "/tmp"))))
;; Tests fail with "Uncaught Python exception: python: undefined
;; symbol: objc_getClass".
#:tests? #f))
(propagated-inputs
(list python-pyqt))
(home-page "https://pyzo.org")
(synopsis
"Python IDE for scientific computing")
(description
"Pyzo is a Python IDE focused on interactivity and introspection,
which makes it very suitable for scientific computing. Its practical
design is aimed at simplicity and efficiency.
It consists of two main components, the editor and the shell, and uses
a set of pluggable tools to help the programmer in various ways. Some
example tools are source structure, project manager, interactive help,
workspace...")
(license license:bsd-2)))
(define-public python-osc
(package
(name "python-osc")
(version "1.7.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "python-osc" version))
(sha256
(base32 "0cnh0z5lnng7fh48nmfaqqn8j25k13gkd4rhxd3m6sjqiix9s3vn"))
(snippet
#~(begin (use-modules (guix build utils))
(substitute* "pythonosc/udp_client.py"
(("from collections import Iterable")
"from collections.abc import Iterable"))))))
(build-system python-build-system)
(home-page "https://github.com/attwad/python-osc")
(synopsis "Open Sound Control server and client implementations")
(description
"@code{python-osc} is a pure Python library with no external
dependencies. It implements the @uref{http://opensoundcontrol.org/spec-1_0,
Open Sound Control 1.0} specification.")
(license license:unlicense)))
(define-public python-voluptuous
(package
(name "python-voluptuous")
(version "0.11.7")
(source
(origin
(method url-fetch)
(uri (pypi-uri "voluptuous" version))
(sha256
(base32
"0mplkcpb5d8wjf8vk195fys4y6a3wbibiyf708imw33lphfk9g1a"))))
(build-system python-build-system)
(native-inputs
(list python-nose))
(home-page "https://github.com/alecthomas/voluptuous")
(synopsis "Python data validation library")
(description
"Voluptuous is a Python data validation library. It is primarily
intended for validating data coming into Python as JSON, YAML, etc.")
(license license:bsd-3)))
(define-public python-cmd2
(package
(name "python-cmd2")
(version "2.3.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "cmd2" version))
(sha256
(base32
"0h1naik558qh48gx2iyy0a0khvw5fz0in69y84mbrhsm9nq7w3bm"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(if tests?
(invoke "pytest" "-vv" "-k"
;; These tests fail because no EDITOR is in PATH.
"not test_find_editor_not_specified \
and not test_transcript")
(format #t "test suite not run~%")))))))
(propagated-inputs
(list python-attrs python-colorama python-pyperclip python-wcwidth))
(native-inputs
(list python-invoke
python-mock
python-pytest
python-pytest-cov
python-pytest-mock
python-setuptools-scm))
(home-page "https://github.com/python-cmd2/cmd2")
(synopsis "Tool for building interactive command line applications")
(description
"Cmd2 is a tool for building interactive command line applications in
Python. Its goal is to make it quick and easy for developers to build
feature-rich and user-friendly interactive command line applications. It
provides a simple API which is an extension of Python's built-in @code{cmd}
module. @code{cmd2} provides a wealth of features on top of @code{cmd} to
make your life easier and eliminates much of the boilerplate code which would
be necessary when using @code{cmd}.")
(license license:expat)))
(define-public python-pytidylib
(package
(name "python-pytidylib")
(version "0.3.2")
(source (origin
(method url-fetch)
(uri (pypi-uri "pytidylib" version))
(sha256
(base32
"1wqa9dv5d7swka14rnky862hc7dgk2g3dhlrz57hdn3hb7bwic92"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'fix-queue-import
(lambda _
;; Adjust Queue import for Python 3. Remove for versions >=0.4.0.
(substitute* "tests/threadsafety.py"
(("from Queue import Queue")
"from queue import Queue"))))
(add-before 'build 'qualify-libtidy
(lambda* (#:key inputs #:allow-other-keys)
(let ((libtidy (search-input-file inputs "/lib/libtidy.so")))
(substitute* "tidylib/tidy.py"
(("ctypes\\.util\\.find_library\\('tidy'\\)")
(format #f "'~a'" libtidy)))
#t))))))
(inputs (list tidy-html))
(home-page "https://github.com/countergram/pytidylib")
(synopsis "Python wrapper for HTML Tidy library")
(description
"PyTidyLib is a Python package that wraps the HTML Tidy library. This
allows you, from Python code, to “fix” invalid (X)HTML markup.")
(license license:expat)))
(define-public python-mujson
(package
(name "python-mujson")
(version "1.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "mujson" version))
(sha256
(base32
"0wbj6r8yzsdx2b0kbldlkznr1a9nn33za2q9x3g0hbg420dwzn97"))))
(build-system python-build-system)
(home-page "https://github.com/mattgiles/mujson")
(synopsis "Use the fastest JSON functions available at import time")
(description "This package selects the fastest JSON functions available
at import time.")
(license license:expat)))
(define-public python-bashlex
(package
(name "python-bashlex")
(version "0.18")
(source
(origin
(method url-fetch)
(uri (pypi-uri "bashlex" version))
(sha256
(base32
"1vln4zszzdqkypiir2hxsvkhgbf816005lbgqcw66rymqq0kmc2v"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'build 'pregenerate-yacc-tables
(lambda _
;; parser.py caches tables, which attempts to write to site lib
;; see https://github.com/idank/bashlex/issues/51
(invoke "python" "-c" "import bashlex"))))))
(home-page
"https://github.com/idank/bashlex")
(synopsis "Python parser for bash")
(description "@code{bashlex} is a Python port of the parser used
internally by GNU bash.
For the most part it's transliterated from C, the major differences are:
@itemize
@item it does not execute anything
@item it is reentrant
@item it generates a complete AST
@end itemize
")
(license license:gpl3+)))
(define-public python-jinxed
(package
(name "python-jinxed")
(version "1.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "jinxed" version))
(sha256
(base32
"1n7vl03rhjd0xhjgbjlh8x9f8yfbhamcwkgvs4jg7g5qj8f0wk89"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(add-before 'check 'set-environment-variables
(lambda* (#:key inputs #:allow-other-keys)
(let ((ncurses (assoc-ref inputs "ncurses")))
(setenv "TERM" "LINUX")
(setenv "TERMINFO" (string-append ncurses "/share/terminfo"))
#t))))
#:tests? #f)) ; _curses.error: setupterm: could not find terminal
(native-inputs
(list ncurses))
(home-page "https://github.com/Rockhopper-Technologies/jinxed")
(synopsis "Jinxed Terminal Library")
(description
"Jinxed is an implementation of a subset of the Python curses library.")
(license license:mpl2.0)))
(define-public python-svgutils
(package
(name "python-svgutils")
(version "0.3.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "svgutils" version))
(sha256
(base32
"0lz0w2ajdvwd269a7ppnzawmx8px0116j0nx8xvhlihxrd28zx4y"))))
(build-system python-build-system)
(propagated-inputs
(list python-lxml))
(home-page "https://svgutils.readthedocs.io")
(synopsis "Python SVG editor")
(description "This is an utility package that helps with editing and
concatenating SVG files. It is especially directed at scientists preparing
final figures for submission to journals. So far it supports arbitrary
placement and scaling of SVG figures and adding markers, such as labels.")
(license license:expat)))
(define-public python-blessed
(package
(name "python-blessed")
(version "1.20.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "blessed" version))
(sha256
(base32
"103ng3ap33xs6i7606q3k6rwvjva9l7qi8j7vw08y13ffkw6gp9c"))
(snippet
;; Don't get hung up on Windows test failures.
'(delete-file "blessed/win_terminal.py"))))
(build-system pyproject-build-system)
(arguments
(list
;; Avoid python-pytest-coverage
#:test-flags '(list "-c /dev/null")))
(propagated-inputs (list python-six python-wcwidth))
(native-inputs (list python-pytest))
(home-page "https://github.com/jquast/blessed")
(synopsis "Wrapper around terminal capabilities")
(description
"Blessed is a thin, practical wrapper around terminal styling, screen
positioning, and keyboard input.")
(license license:expat)))
(define-public python-readme-renderer
(package
(name "python-readme-renderer")
(version "34.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "readme_renderer" version))
(sha256
(base32
"1c75h9znffc2lh4j56yg23l5ifj5l8fbdq3kfigi8vbh45zx3d6z"))))
(build-system python-build-system)
(arguments
'(#:phases (modify-phases %standard-phases
(add-after 'unpack 'loosen-cmarkgfm-dependency
(lambda _
;; Permit newer versions of cmarkgfm.
(substitute* "setup.py"
(("cmarkgfm>=0\\.5\\.0,<0\\.7\\.0")
"cmarkgfm>=0.5.0"))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
;; The GFM tests fail due to slight differences in the
;; generated vs expected HTML due to using a more
;; recent bleach version (see:
;; https://github.com/pypa/readme_renderer/issues/234).
(invoke "pytest" "-vv" "-k" "not GFM")))))))
(propagated-inputs
(list python-bleach python-docutils python-pygments
;; Optional dependencies.
python-cmarkgfm)) ;required by postorius
(native-inputs
(list python-mock python-pytest))
(home-page "https://github.com/pypa/readme_renderer")
(synopsis "Render README files in Warehouse")
(description
"Readme Renderer is a library that will safely render arbitrary README
files into HTML. It is designed to be used in Warehouse to render the
@code{long_description} for packages. It can handle Markdown, reStructuredText,
and plain text.")
(license license:asl2.0)))
(define-public python-lazr-delegates
(package
(name "python-lazr-delegates")
(version "2.0.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "lazr.delegates" version))
(sha256
(base32
"1rdnl85j9ayp8n85l0ciip621j9dcziz5qnmv2m7krgwgcn31vfx"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests? (invoke "nosetests")))))))
(native-inputs
(list python-nose))
(propagated-inputs
(list python-zope-interface))
(home-page "https://launchpad.net/lazr.delegates")
(synopsis "Easily write objects that delegate behavior")
(description
"The @code{lazr.delegates} package makes it easy to write objects that
delegate behavior to another object. The new object adds some property or
behavior on to the other object, while still providing the underlying interface,
and delegating behavior.")
(license license:lgpl3)))
(define-public python-lazr-config
(package
(name "python-lazr-config")
(version "2.2.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "lazr.config" version))
(sha256
(base32
"1qdbrzl61q7cjhbnxvw9y3frcr935y7diwy15xrwcv9ynvw76jmp"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "python" "-s" "-m" "nose" "-P" "lazr"))))))
(native-inputs
(list python-nose))
(propagated-inputs
(list python-lazr-delegates python-zope-interface))
(home-page "https://launchpad.net/lazr.config")
(synopsis "Create configuration schemas and process and validate configurations")
(description
"The LAZR config system is typically used to manage process configuration.
Process configuration is for saying how things change when we run systems on
different machines, or under different circumstances. This system uses ini-like
file format of section, keys, and values. The config file supports inheritance
to minimize duplication of information across files. The format supports schema
validation.")
(license license:lgpl3)))
(define-public python-flufl-bounce
(package
(name "python-flufl-bounce")
(version "4.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "flufl.bounce" version))
(sha256
(base32
"0c9qc2l47lyqnpwskp6vvi7m3jqh6hx42v6d35dgxh3fjzmlll15"))))
(build-system python-build-system)
(arguments
(list #:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? inputs outputs #:allow-other-keys)
(when tests?
(with-directory-excursion
(string-append (site-packages inputs outputs) "/flufl")
(invoke "python" "-m" "nose2" "-v"))))))))
(propagated-inputs
(list python-atpublic python-zope-interface))
(native-inputs
(list python-flufl-testing python-nose2))
(home-page "https://fluflbounce.readthedocs.io/en/latest/")
(synopsis "Email bounce detectors")
(description "The @code{flufl.bounce} library provides a set of heuristics
and an API for detecting the original bouncing email addresses from a bounce
message. Many formats found in the wild are supported, as are VERP and
RFC 3464.")
(license (list license:asl2.0
license:lgpl3)))) ; only for setup_headers.py
(define-public python-flufl-i18n
(package
(name "python-flufl-i18n")
(version "3.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "flufl.i18n" version))
(sha256
(base32
"1flwpn1xhgc957zj3zxw92dhdjh0lsy0hdvzq32dzqpsajfsvq1r"))))
(build-system python-build-system)
(propagated-inputs
(list python-atpublic))
(home-page "https://flufli18n.readthedocs.io")
(synopsis "API for Python internationalization")
(description
"This package provides a high-level, convenient API for managing
internationalization/translation contexts in Python applications. There is a
simple API for single-context applications, such as command line scripts which
only need to translate into one language during the entire course of their
execution. There is a more flexible, but still convenient API for multi-context
applications, such as servers, which may need to switch language contexts for
different tasks.")
(license license:asl2.0)))
(define-public python-flufl-lock
(package
(name "python-flufl-lock")
(version "4.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "flufl.lock" version))
(sha256
(base32
"055941zyma3wfx25jhm8wcsghpv3jc3iwi1gdrdjhzcnfhn62lxq"))))
(build-system python-build-system)
(propagated-inputs
(list python-atpublic python-psutil))
(home-page "https://flufllock.readthedocs.io")
(synopsis "NFS-safe file locking with timeouts for POSIX systems")
(description
"The @dfn{flufl.lock} package provides NFS-safe file locking with
timeouts for POSIX systems. It is similar to the @code{O_EXCL} option of the
@code{open} system call but uses a lockfile. Lock objects support lock-breaking
and have a maximum lifetime built-in.")
(license (list license:asl2.0
license:lgpl3)))) ; only for setup_helpers.py
(define-public python-flufl-testing
(package
(name "python-flufl-testing")
(version "0.8")
(source
(origin
(method url-fetch)
(uri (pypi-uri "flufl.testing" version))
(sha256
(base32
"1nkm95mhcfhl4x5jgs6y97ikszaxsfh07nyawsih6cxxm6l62641"))))
(build-system python-build-system)
(arguments '(#:tests? #f)) ;no tests
(home-page "https://gitlab.com/warsaw/flufl.testing")
(synopsis "Collection of test tool plugins")
(description
"This package contains a small collection of test tool plugins for
@code{nose2} and @code{flake8}.")
(license license:asl2.0)))
(define-public python-devtools
(package
(name "python-devtools")
(version "0.12.2")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/samuelcolvin/python-devtools")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0snmx7f0s44rzzx8advzmgj5av9dlpz1kx05f7ysya8xrhv5nwfl"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
;; Disable some failing tests.
#~(list "-k" (string-append "not test_print_subprocess"
" and not test_simple")
"--ignore=tests/test_insert_assert.py")
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'relax-requirements
(lambda _
(substitute* "pyproject.toml"
;; Pygments 2.12.0 is available.
(("2.15.0") "2.12.0")
;; executing 0.8.2 is available.
(("1.1.1") "0.8.2")))))))
(native-inputs
(list python-hatchling python-pytest python-pytest-mock))
(propagated-inputs
(list python-asttokens python-executing python-pygments))
(home-page "https://github.com/samuelcolvin/python-devtools")
(synopsis "Debug command and development tools")
(description
"This package provides a debug print command and other development tools.
It adds a simple and readable way to print stuff during development.")
(license license:expat)))
(define-public python-dateparser
(package
(name "python-dateparser")
(version "1.1.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "dateparser" version))
(sha256
(base32
"19fbgq1zrwx10kljmdbs3p0y2m2xsgww20pqzw4kv6161zipsymf"))))
(build-system pyproject-build-system)
(propagated-inputs
(list python-dateutil python-pytz python-regex python-ruamel.yaml
python-tzlocal))
(native-inputs
(list python-flake8 python-pytest python-parameterized tzdata-for-tests))
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'check 'set-check-environment
(lambda* (#:key inputs #:allow-other-keys)
(setenv "TZ" "UTC")
(setenv "TZDIR"
(search-input-directory inputs
"share/zoneinfo"))))
(add-before 'check 'delete-failing-tests
(lambda _
(with-directory-excursion "tests"
(for-each delete-file
'("test_dateparser_data_integrity.py"
"test_hijri.py"
"test_jalali.py"
"test_language_detect.py"))))))))
(home-page "https://github.com/scrapinghub/dateparser")
(synopsis
"Date parsing library designed to parse dates from HTML pages")
(description
"@code{python-dateparser} provides modules to easily parse localized
dates in almost any string formats commonly found on web pages.")
(license license:bsd-3)))
(define-public python-dparse
(package
(name "python-dparse")
(version "0.5.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "dparse" version))
(sha256
(base32
"0rzkg3nymsbwdjc0ms2bsajkda02jipwyp3xk97qj71f21lz3dd1"))))
(build-system python-build-system)
(native-inputs
(list python-pytest))
(propagated-inputs
(list python-packaging python-pyyaml python-toml))
(home-page "https://github.com/pyupio/dparse")
(synopsis "Parser for Python dependency files")
(description "This package provides a parser for Python dependency files.")
(license license:expat)))
(define-public python-dpath
(package
(name "python-dpath")
(version "2.0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "dpath" version))
(sha256
(base32
"1ymi9ssk7i0mx3mviplf4csfvzibdd6wyj4qzj6s487n9xgnp85y"))))
(build-system python-build-system)
(native-inputs
(list python-hypothesis python-mock python-nose))
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key inputs outputs #:allow-other-keys)
(add-installed-pythonpath inputs outputs)
;; This invokation is taken from tox.ini.
(invoke "nosetests" "-d" "-v" "tests/"))))))
(home-page "https://github.com/akesterson/dpath-python")
(synopsis "File-system-like pathing and searching for dictionaries")
(description
"@code{python-dpath} is a library for accessing and searching
dictionaries via /slashed/paths ala xpath.
Basically it lets you glob over a dictionary as if it were a file system. It
allows you to specify globs (ala the bash eglob syntax, through some advanced
fnmatch.fnmatch magic) to access dictionary elements, and provides some
facility for filtering those results.")
(license license:expat)))
(define-public python-safety
(package
(name "python-safety")
(version "1.9.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "safety" version))
(sha256
(base32
"1j801xsxfzavjbzhhc934awvnk1b7jc0qsw3jp3ys0241mlj1gr3"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'disable-tests
(lambda _
(substitute* "tests/test_safety.py"
;; requires network
(("def test_check_live") "def _test_check_live"))
#t)))))
(propagated-inputs
(list python-click python-dparse python-packaging python-requests))
(home-page "https://github.com/pyupio/safety")
(synopsis "Check installed dependencies for known vulnerabilities")
(description "Safety checks installed dependencies for known vulnerabilities.
By default it uses the open Python vulnerability database Safety DB.")
(license license:expat)))
(define-public python-pypandoc
(package
(name "python-pypandoc")
(version "1.7.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pypandoc" version))
(sha256
(base32
"0l6a8ngzpx363q2jskxxkx6psfhqrvc4js80dmn16r3vw6m2cb40"))))
(build-system python-build-system)
(inputs
(list pandoc python-pandocfilters))
(propagated-inputs
`(("wheel" ,python-wheel)))
(native-inputs
`(("texlive" ,(texlive-updmap.cfg (list texlive-lm texlive-xcolor)))))
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'check 'disable-tests
(lambda _
;; Disable test requiring network access
(substitute* "tests.py"
(("test_basic_conversion_from_http_url")
"skip_test_basic_conversion_from_http_url"))
#t)))))
(home-page "https://github.com/bebraw/pypandoc")
(synopsis "Python wrapper for pandoc")
(description "pypandoc is a thin Python wrapper around pandoc
and pandoc-citeproc.")
(license license:expat)))
(define-public python-rnc2rng
(package
(name "python-rnc2rng")
(version "2.6.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "rnc2rng" version))
(sha256
(base32
"1wbqvz2bhq2f5kqi7q2q3m9y5vs9rj970zhnjh502pvvhmbx20as"))))
(build-system python-build-system)
(propagated-inputs
(list python-rply))
(arguments
`(#:phases (modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "python" "test.py"))))))
(home-page "https://github.com/djc/rnc2rng")
(synopsis "Convert RELAX NG Compact to regular syntax")
(description
"This package provides the @command{rnc2rng} command-line tool as well as
a Python library to convert RELAX NG schemata in Compact syntax (rnc) to
equivalent schemata in the XML-based default RELAX NG syntax.")
(license license:expat)))
(define-public python-telethon
(package
(name "python-telethon")
(version "1.17.5")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/LonamiWebs/Telethon")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0l9fhdrq576vllgi9aam45xzw5xi6jhgdv5zz8i4ygssdp7cm8jl"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "py.test" "-v"))
#t)))))
(propagated-inputs
(list python-rsa python-pyaes))
(native-inputs
(list python-pytest python-pytest-asyncio python-pytest-trio))
(home-page "https://docs.telethon.dev")
(synopsis "Full-featured Telegram client library for Python 3")
(description "This library is designed to make it easy to write Python
programs that can interact with Telegram.")
(license license:expat)))
(define-public python-citeproc-py
(package
(name "python-citeproc-py")
(version "0.5.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "citeproc-py" version))
(sha256
(base32
"00aaff50jy4j0nakdzq9258z1gzrac9baarli2ymgspj88jg5968"))))
(build-system python-build-system)
(propagated-inputs
(list python-lxml python-rnc2rng))
(home-page
"https://github.com/brechtm/citeproc-py")
(synopsis "Citations and bibliography formatter")
(description
"Citeproc-py is a CSL processor for Python. It aims to implement the
CSL 1.0.1 specification. citeproc-py can output styled citations and
bibliographies in a number of different output formats. Currently supported
are plain text, reStructuredText and HTML.")
(license license:bsd-2)))
(define-public python-inform
(package
(name "python-inform")
(version "1.23.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "inform" version))
(sha256
(base32
"0dvc5klbnbryrvspp45nmlg02g40j7xspcz7lqsm0c0dj0z29zdz"))))
(build-system python-build-system)
(arguments
`(#:tests? #f)) ; PyPI tarball lacks tests
(native-inputs
(list python-hypothesis python-pytest-cov python-pytest-runner))
(propagated-inputs
(list python-arrow python-six))
(home-page "https://inform.readthedocs.io")
(synopsis "Print & logging utilities for communicating with user")
(description
"Inform is designed to display messages from programs that are typically run from
a console. It provides a collection of ‘print’ functions that allow you to simply and
cleanly print different types of messages.")
(license license:gpl3+)))
(define-public python-userpath
(package
(name "python-userpath")
(version "1.9.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "userpath" version))
(sha256
(base32 "05fqxzdi27vqm5lywxs6bm2j4d8k91fx2ihqhg65g4h6mf6jhlkc"))))
(build-system pyproject-build-system)
(arguments
;; See https://github.com/ofek/userpath/issues/43.
;; In Guix, tests try to find the temporary build directory in PATH, but
;; only the store output is present.
(list #:tests? #f))
(native-inputs (list python-hatchling python-pytest))
(propagated-inputs (list python-click))
(home-page "https://github.com/ofek/userpath")
(synopsis "Add locations to the user's PATH")
(description "This package provides a tool for modifying a user's PATH.")
(license license:expat)))
(define-public hatch
(package
(name "hatch")
(version "1.7.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "hatch" version))
(sha256
(base32 "0ipvj1pxdb6wb1sblh22h9gnh6byjnwcl7hfcnk88dmkslgp1z3s"))
(modules '((guix build utils)))
(snippet '(substitute* "pyproject.toml"
;; We have virtualenv 20.3.1.
(("virtualenv>=20.16.2")
"virtualenv>=20.3.1")))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
;; XXX: tests below fail due to zipfile reporting incorrect zip dates.
#~(list "-k"
(string-append
"not "
(string-join
(list "test_default"
"test_explicit_path"
"test_editable_default"
"test_editable_default_dependencies"
"test_editable_default_force_include"
"test_editable_default_force_include_option"
"test_editable_exact"
"test_editable_exact_extra_dependencies"
"test_editable_exact_force_include"
"test_editable_exact_force_include_option"
"test_editable_exact_force_include_build_data_precedence"
"test_editable_pth")
" and not ")))
#:phases #~(modify-phases %standard-phases
(add-before 'check 'pre-check
(lambda _
(setenv "HOME" "/tmp"))))))
(native-inputs (list git-minimal
python-pytest
python-pytest-mock
python-pytest-xdist))
(propagated-inputs (list python-click
python-hatchling
python-httpx
python-hyperlink
python-keyring
python-packaging
python-pexpect
python-platformdirs
python-pyperclip
python-rich
python-shellingham
python-tomli-w
python-tomlkit
python-userpath
python-virtualenv))
(home-page "https://hatch.pypa.io/latest/")
(synopsis "Python project management")
(description "Hatch is a modern, extensible Python project manager.
Features
@itemize
@item Standardized build system with reproducible builds by default
@item Robust environment management with support for custom scripts
@item Configurable Python distribution management
@item Easy publishing to PyPI or other indexes
@item Version management
@item Configurable project generation with sane defaults
@item Responsive CLI, ~2-3x faster than equivalent tools
@end itemize")
(license license:expat)))
(define-public python-nestedtext
(package
(name "python-nestedtext")
(version "1.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "nestedtext" version))
(sha256
(base32
"0xjx863n7yd1xmkwhy48lhmqrmlzgbx3civhk386hvrzyq4sx148"))))
(build-system python-build-system)
(arguments
`(#:tests? #f)) ; PyPI tarball lacks tests
(propagated-inputs
(list python-inform))
(home-page "https://nestedtext.org")
(synopsis "Human readable and writable data interchange format")
(description
"NestedText is a file format for holding data that is to be entered, edited, or
viewed by people. It allows data to be organized into a nested collection of
dictionaries, lists, and strings. In this way it is similar to JSON and YAML, but
without the complexity and risk of YAML and without the syntactic clutter of JSON.
NestedText is both simple and natural. Only a small number of concepts and rules must
be kept in mind when creating it. It is easily created, modified, or viewed with
a text editor and easily understood and used by both programmers and non-programmers.")
(license license:expat))) ; MIT license
(define-public python-nest-asyncio
(package
(name "python-nest-asyncio")
(version "1.5.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "nest_asyncio" version))
(sha256
(base32
"0rbdw7lry66yj13hh4w63yzflnapdal1ffl237k8nsa2v4f2jhp4"))))
(build-system python-build-system)
(home-page "https://github.com/erdewit/nest_asyncio")
(synopsis "Patch asyncio to allow nested event loops")
(description
"By design @code{asyncio} does not allow its event loop to be nested.
This presents a practical problem: when in an environment where the event loop
is already running it's impossible to run tasks and wait for the result. This
module patches @code{asyncio} to allow nested use of @code{asyncio.run} and
@code{loop.run_until_complete}.")
(license license:bsd-3)))
(define-public python-simpervisor
(package
(name "python-simpervisor")
(version "1.0.0")
(source
(origin
;; Tests not included in release.
(method git-fetch)
(uri (git-reference
(url "https://github.com/yuvipanda/simpervisor")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0drvqxbr6fpydb4d7z5dhn97d578gf39sd8cawyl6ksf1f4y8yzg"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags '(list "-n" (number->string (parallel-job-count)))))
(native-inputs
(list python-aiohttp
python-hatchling
python-psutil
python-pytest
python-pytest-asyncio
python-pytest-xdist))
(home-page "https://github.com/yuvipanda/simpervisor")
(synopsis "Simple async process supervisor")
(description
"This package provides a simple async process supervisor in Python.")
(license license:bsd-3)))
(define-public python-parallel
(package
(name "python-parallel")
(version "1.6.4.4")
(source
(origin
(method url-fetch)
(uri (string-append
"https://www.parallelpython.com/downloads/pp/pp-"
version ".zip"))
(sha256
(base32
"1mzk4yabxj6r149fswhis18hd8dnag5sj8i4wb06450zq3pi8dh7"))))
(native-inputs
(list unzip))
(propagated-inputs
(list python-six))
(build-system python-build-system)
(arguments '(#:tests? #f)) ; No test suite.
(home-page "https://www.parallelpython.com")
(synopsis "Parallel and distributed programming for Python")
(description "Parallel Python module (PP) provides an easy and efficient
way to create parallel-enabled applications for SMP computers and clusters.
PP module features cross-platform portability and dynamic load balancing.
Thus applications written with PP will parallelize efficiently even on
heterogeneous and multi-platform clusters (including clusters running other
applications with variable CPU loads).")
(license license:bsd-3)))
(define-public python-param
(package
(name "python-param")
(version "2.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "param" version))
(sha256
(base32 "07z7az7xg8pzjrmaf928is7n6siw9v9nxfmf0a5vgqj7nl40pcx7"))))
(build-system pyproject-build-system)
(native-inputs
(list python-cloudpickle
python-coverage
python-hatchling
python-hatch-vcs
python-ipython
python-jsonschema
python-nbval
python-nest-asyncio
python-numpy
python-odfpy
python-openpyxl
python-pandas
python-pyarrow
python-pytest
python-pytest-asyncio
python-pytest-xdist
python-tables
python-xlrd))
(home-page "https://param.holoviz.org/")
(synopsis
"Make your Python code clearer and more reliable by declaring Parameters")
(description
"Param is a library for handling all the user-modifiable parameters,
arguments, and attributes that control your code. It provides automatic,
robust error-checking while dramatically reducing boilerplate code, letting
you focus on what you want your code to do rather than on checking for all the
possible ways users could supply inappropriate values to a function or
class.")
(license license:bsd-3)))
(define-public python-djitellopy
(package
(name "python-djitellopy")
(version "2.5.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "djitellopy" version))
(sha256
(base32 "1kc0syb4hpn7fay0rxpazmczag6jw3pncrrc6v762jj0afiwkrps"))))
(build-system pyproject-build-system)
(arguments
(list
#:tests? #f ;no test suite
#:phases
#~(modify-phases %standard-phases
;; OpenCV does not ship metadata files for its Python library, which
;; makes it invisible to the sanity_check script (see:
;; https://github.com/opencv/opencv/issues/24810).
(delete 'sanity-check))))
(propagated-inputs
(list opencv ;for opencv-python
python-av
python-numpy
python-pillow))
(home-page "https://github.com/damiafuentes/DJITelloPy")
(synopsis
"DJI Tello drone video streaming, swarms and state packets library")
(description
"DJI Tello drone Python interface using the official Tello SDK and Tello
EDU SDK. This library has the following features:
@itemize
@item Implementation of all tello commands
@item Retrieve a video stream easily
@item Receive and parse state packets
@item Control a swarm of drones.
@end itemize")
(license license:expat)))
(define-public python-djvulibre
(package
(name "python-djvulibre")
(version "0.8.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "python-djvulibre" version))
(sha256
(base32 "089smpq29ll0z37lnq26r2f72d31i33xm9fw9pc6hlcsm6nbjbiv"))))
(build-system python-build-system)
(native-inputs
(list ghostscript pkg-config python-nose))
(inputs
(list djvulibre python-cython))
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'fix-tests
(lambda _
;; Unit tests try to load the 'dllpath.py' and fail, because it
;; doesn't make sense on GNU/Linux.
(delete-file "djvu/dllpath.py")
#t)))))
(synopsis "Python bindings for DjVuLibre")
(description "This is a set of Python bindings for the DjVuLibre library.")
(home-page "https://jwilk.net/software/python-djvulibre")
(license license:gpl2)))
(define-public python-version
;; No version tags available in the git repo; just using bare commit instead.
(let ((commit "5232eea250ab72cc5cb72b0b75efb35d2192b906")
(revision "1"))
(package
(name "python-version")
(version (git-version "0.0.2" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://gitlab.com/halfak/python_version")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"0w210559ypdynlj9yn40m9awzkaknwrf682i99hswl7h66sdgh0h"))))
(build-system python-build-system)
(home-page "https://gitlab.com/halfak/python_version")
(synopsis "Python version checking utility")
(description
"This package provides a simple utility for checking the python version.")
(license license:expat))))
(define-public python-versioneer
(package
(name "python-versioneer")
(version "0.29")
(source
(origin
(method url-fetch)
(uri (pypi-uri "versioneer" version))
(sha256
(base32
"0cap4cjckxp9mlkprqayfs77k3pn5iwpr2riacdxc4bjhnwq7cjs"))
(patches (search-patches "python-versioneer-guix-support.patch"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
;; Taken from tox.ini.
(invoke "python" "setup.py" "make_versioneer")
(invoke "python" "-m" "unittest" "discover" "test")
(invoke "python" "test/git/test_git.py" "-v")
;; Some invocation tests require the network.
;;(invoke "python" "test/git/test_invocations.py" "-v")
(invoke "python" "setup.py" "make_long_version_py_git")
(invoke "pyflakes" "setup.py" "versioneer.py" "git_version.py")
(invoke "python" "test/run_pyflakes_src.py")
(invoke "pyflakes" "test")
(invoke "flake8" "git_version.py" "versioneer.py")
(invoke "pycodestyle" "--max-line-length=88"
"git_version.py" "versioneer.py")))))))
(native-inputs
(list git python-flake8 python-pycodestyle python-pyflakes))
(propagated-inputs
(list python-tomli))
(home-page "https://github.com/python-versioneer/python-versioneer")
(synopsis "Version-string management for VCS-controlled trees")
(description
"@code{versioneer} is a tool for managing a recorded version number in
distutils-based python projects. The goal is to remove the tedious and
error-prone \"update the embedded version string\" step from your release
process.")
(license license:unlicense)))
(define-public python-gamera
(package
(name "python-gamera")
(version "4.0.0")
(source
(origin
(method url-fetch)
(uri (string-append "https://gamera.informatik.hsnr.de/download/"
"gamera-" version ".tar.gz"))
(sha256
(base32 "0fhlwbvpm3k54n4aa1y6qd348jqrb54ak9p0ic16drx7f07dsq05"))
(modules '((guix build utils)))
(snippet
'(begin
;; Remove bundled libraries.
(for-each delete-file-recursively
'("src/libpng-1.2.5"
"src/libtiff"
"src/zlib-1.2.8"))))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'disable-wx-support
(lambda _
(substitute* "setup.py"
(("no_wx = False")
"no_wx = True"))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
;; Some tests require a writable HOME directory and test
;; directory.
(setenv "HOME" "/tmp")
(mkdir "tests/tmp") ;the code assumes this directory exists
;; (for-each make-file-writable (find-files "tests"))
(with-directory-excursion "tests"
(invoke "pytest" "-vv"
;; This test causes gamera/gendoc.py to be loaded,
;; which fails due to the missing docutils, pygments
;; and silvercity (very old, unpackaged) libraries.
"--ignore" "test_plugins.py"
;; This test triggers a segfault (see:
;; https://github.com/hsnr-gamera/gamera-4/issues/47).
"--ignore" "test_rle.py"))))))))
(native-inputs (list python-pytest))
(inputs (list libpng libtiff zlib))
(synopsis "Framework for building document analysis applications")
(description
"Gamera is a toolkit for building document image recognition systems.")
(home-page "https://gamera.informatik.hsnr.de/")
(license license:gpl2+)))
(define-public python-contextvars
(package
(name "python-contextvars")
(version "2.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "contextvars" version))
(sha256
(base32
"17n3w8c20kgkgc6khaafdhhlcdj4bzman4paxqsl7harma59137k"))))
(build-system python-build-system)
(propagated-inputs
(list python-immutables))
(home-page
"https://github.com/MagicStack/contextvars")
(synopsis "PEP 567 Backport")
(description "This package implements a backport of Python 3.7
@code{contextvars} module (see PEP 567) for Python 3.6.")
(license license:asl2.0)))
(define-public python-aiofiles
(package
(name "python-aiofiles")
(version "23.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "aiofiles" version))
(sha256
(base32
"0d8n79slihf1lkbh2m6yw51rlq6n6vssljsdacbdpq0rkbglglpd"))))
(build-system python-build-system)
(home-page "https://github.com/Tinche/aiofiles")
(synopsis "File support for @code{asyncio}")
(description "@code{python-aiofiles} is a library for handling local
disk files in asyncio applications.")
(license license:asl2.0)))
(define-public python-pyre-extensions
(package
(name "python-pyre-extensions")
(version "0.0.18")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pyre-extensions" version))
(sha256
(base32
"0c5cbbqrfyjwakdh3kbwxis6mbrbwky1z1fqslgszgpcj4g43q30"))))
(build-system python-build-system)
(propagated-inputs
(list python-typing-extensions python-typing-inspect))
(home-page "https://pyre-check.org")
(synopsis
"Type system extensions for use with @code{python-pyre}")
(description
"@code{python-pyre-extensions} defines extensions to the standard
@code{typing} module that are supported by the Pyre typechecker.")
(license license:expat)))
(define-public python-dataclasses
(package
(name "python-dataclasses")
(version "0.8")
(source
(origin
(method url-fetch)
(uri (pypi-uri "dataclasses" version))
(sha256
(base32
"15sc12nrc7gxwb30vfa6frzdnpmbap9ibi1fr1yrbkra6izhcyc4"))))
(build-system python-build-system)
(home-page
"https://github.com/ericvsmith/dataclasses")
(synopsis
"Backport of the @code{dataclasses} module for Python 3.6")
(description
"This is an implementation of PEP 557, Data Classes. It is a
backport of the @code{dataclasses} module for Python 3.6.")
(license license:asl2.0)))
(define-public python-pywatchman
(package
(name "python-pywatchman")
(version "1.4.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pywatchman" version))
(sha256
(base32
"1yf2gm20wc3djpb5larxii3l55xxby0il2ns3q0v1byyfnr7w16h"))))
(build-system python-build-system)
(arguments
`(#:tests? #f)) ;there are none
(home-page
"https://facebook.github.io/watchman/")
(synopsis "Watchman client for python")
(description "@code{python-pywatchman} is a library to connect and
query Watchman to discover file changes.")
(license license:bsd-3)))
(define-public python-roundrobin
(package
(name "python-roundrobin")
(version "0.0.2")
(source (origin
(method url-fetch)
(uri (pypi-uri "roundrobin" version))
(sha256
(base32 "1akwhvfyi0120zg2xkhfc6jwfkirz5x90yyvw06bndhaaxwcnc5c"))))
(build-system python-build-system)
(arguments '(#:tests? #f)) ;no tests on PyPI and no tags in repo
(home-page "https://github.com/linnik/roundrobin")
(synopsis "Collection of roundrobin utilities")
(description
"This package provides a collection of utilities for round-robin
distribution in Python.")
(license license:expat)))
(define-public python-helpdev
(package
(name "python-helpdev")
(version "0.7.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "helpdev" version))
(sha256
(base32
"0gfvj28i82va7c264jl2p4cdsl3lpf9fpb9cyjnis55crfdafqmv"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key inputs outputs tests? #:allow-other-keys)
(when tests?
(add-installed-pythonpath inputs outputs)
(invoke "pytest" "tests"))
#t)))))
(propagated-inputs
(list python-importlib-metadata))
(native-inputs
(list python-pytest))
(home-page "https://gitlab.com/dpizetta/helpdev")
(synopsis
"Extract information about the Python environment easily")
(description
"Helpdev is a library to easily extract information about the Python
environment.")
(license license:expat)))
(define-public python-logutils
(package
(name "python-logutils")
(version "0.3.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "logutils" version))
(sha256
(base32
"10lsi5wv5ysnvf9ya4ncbix6mmipnv5067sf2cglc2f2sljql1dw"))))
(build-system python-build-system)
(home-page "https://bitbucket.org/vinay.sajip/logutils/")
(synopsis "Logging utilities")
(description "This package provides a set of handlers for the Python
standard library logging package. Some of these handlers are out-of-scope
for the standard library, and so they are packaged here. Others are updated
versions which have appeared in recent Python releases, but are usable with
older versions of Python and so are packaged here.")
(license license:bsd-3)))
(define-public python-loguru
(package
(name "python-loguru")
(version "0.7.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "loguru" version))
(sha256
(base32
"1q83kr9zwwxchgyzf8gc6wi68ch5391mwzfxb5wlvs3axly0a4hn"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
;; All of these fail with: error: Cannot find implementation or library
;; stub for module named "loguru"
'(list "--ignore=tests/typesafety/test_logger.yml")))
(propagated-inputs (list python-colorama))
(native-inputs (list python-colorama
python-freezegun
python-mypy
python-pre-commit
python-pytest
python-pytest-cov
python-pytest-mypy-plugins
python-sphinx
python-sphinx-autobuild
python-sphinx-rtd-theme
python-tox))
(home-page "https://github.com/Delgan/loguru")
(synopsis "Python logging made (stupidly) simple")
(description "Python logging made (stupidly) simple")
(license license:expat)))
(define-public python-helper
(package
(name "python-helper")
(version "2.5.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "helper" version))
(sha256
(base32
"1d2j64wgbggzv5rhvil10zndp2w78wa5np5w0psj122ws9qr9wsa"))))
(build-system python-build-system)
(native-inputs
(list python-mock))
(propagated-inputs
(list python-logutils python-pyyaml))
(home-page "https://github.com/gmr/helper")
(synopsis "Library for writing configurable applications and daemons")
(description
"This package provides procedures for quickly writing configurable
applications and daemons.")
(license license:bsd-3)))
(define-public python-qtsass
(package
(name "python-qtsass")
(version "0.4.0")
(source
(origin
;; There are no tests in the PyPI tarball.
(method git-fetch)
(uri (git-reference
(url "https://github.com/spyder-ide/qtsass/")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1skdihfby2f41zxgwa5zv44vdxjrw301rh88rjmzj4xbdlix6cig"))))
(build-system python-build-system)
(arguments
`(#:test-target "pytest"
#:phases
(modify-phases %standard-phases
;; Tests need to read and write files.
(add-before 'check 'make-git-checkout-writable
(lambda _
(for-each make-file-writable (find-files "."))
#t)))))
(native-inputs
(list python-flaky python-pytest python-pytest-cov python-pytest-runner))
(propagated-inputs
(list python-libsass))
(home-page "https://github.com/spyder-ide/qtsass")
(synopsis "Compile SCSS files to valid Qt stylesheets")
(description
"Besides being used in web development, CSS is also the way to stylize
Qt-based desktop applications. However, Qt's CSS has a few variations that
prevent the direct use of SASS compiler.
The purpose of this tool is to fill the gap between SASS and Qt-CSS by
handling those variations.")
(license license:expat)))
(define-public python-qdarkstyle
(package
(name "python-qdarkstyle")
(version "2.8.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "QDarkStyle" version))
(sha256
(base32
"0883vzg35fzpyl1aiijzpfcdfvpq5vi325w0m7xkx7nxplh02fym"))))
(build-system python-build-system)
(arguments
`(;; Fails unable to detect valid Qt bindings even when
;; added as native-inputs.
#:tests? #f))
(propagated-inputs
(list python-helpdev python-qtpy))
(home-page
"https://github.com/ColinDuquesnoy/QDarkStyleSheet")
(synopsis
"Complete dark stylesheet for Python and Qt applications")
(description "QDarkStyle is the most complete dark stylesheet for Python and
Qt applications.")
(license license:expat)))
(define-public python-pystray
(package
(name "python-pystray")
(version "0.19.5")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/moses-palmer/pystray")
(commit "1907f8681d6d421517c63d94f425f9cdd74d0034")))
(file-name (git-file-name name version))
(sha256
(base32 "1vj6c8s7rbc7xc4bi5brx5629ls1ri9prcw9290v85hagilmp609"))))
(build-system python-build-system)
(arguments
(list
;; The test suite requires user interaction, there are no automated
;; tests.
#:tests? #false
#:phases #~(modify-phases %standard-phases
(add-before 'sanity-check 'use-dummy-backend
(lambda _
;; Without setting this, pystray tries to connect to
;; X11 on import.
(setenv "PYSTRAY_BACKEND" "dummy"))))))
(native-inputs (list python-sphinx))
(propagated-inputs (list python-pillow python-six python-xlib))
(home-page "https://github.com/moses-palmer/pystray")
(synopsis "Create a system tray icon")
(description "This library allows you to create a system tray icon.
It makes it possible to specify an icon, a title and a callback for when
the icon is activated. The icon and title can be changed after the icon
has been created, and the visibility of the icon can be toggled.")
(license license:lgpl3+)))
(define-public python-bitstring
(package
(name "python-bitstring")
(version "3.1.7")
(source
(origin
(method url-fetch)
(uri (pypi-uri "bitstring" version))
(sha256
(base32
"0jl6192dwrlm5ybkbh7ywmyaymrc3cmz9y07nm7qdli9n9rfpwzx"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? inputs outputs #:allow-other-keys)
(when tests?
(add-installed-pythonpath inputs outputs)
(with-directory-excursion "test"
(invoke "pytest")))
#t)))))
(native-inputs
(list python-pytest))
(home-page "https://github.com/scott-griffiths/bitstring")
(synopsis
"Simple construction, analysis and modification of binary data")
(description
"Bitstring is a library for simple construction, analysis and modification
of binary data.")
(license license:expat)))
(define-public python-confuse
(package
(name "python-confuse")
(version "1.5.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "confuse" version))
(sha256
(base32
"0bh2kyj8wd7h9gg4nsvrbykl5ly0f70f0wi3fbm204b1f0fcmywj"))))
(build-system python-build-system)
(propagated-inputs
(list python-pyyaml))
(home-page "https://github.com/beetbox/confuse")
(synopsis "Painless YAML configuration")
(description "Confuse is a configuration library for Python that uses
YAML. It takes care of defaults, overrides, type checking, command-line
integration, human-readable errors, and standard OS-specific locations.")
(license license:expat)))
(define-public python-reflink
(package
(name "python-reflink")
(version "0.2.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "reflink" version))
(sha256
(base32
"0fkf3sd958g9hvr3jwlhnhqqzrwxljrc3grsf3yknh94vf13a9f9"))))
(build-system python-build-system)
(arguments
`(#:tests? #false)) ; almost all tests want to run mkfs.btrfs
(propagated-inputs
(list python-cffi))
(native-inputs
(list python-pytest python-pytest-runner))
(home-page "https://gitlab.com/rubdos/pyreflink")
(synopsis "Python wrapper around reflink system call")
(description
"Python reflink wraps around platform specific @code{reflink}
implementations.")
(license license:expat)))
(define-public python-retry
(package
(name "python-retry")
(version "0.9.2")
(source (origin
(method url-fetch)
(uri (pypi-uri "retry" version))
(sha256
(base32 "197v6qrh6858bhzzrjgk2zdqrybppymb1lsvdxnm1i39kfwsigzq"))))
(build-system python-build-system)
(arguments
(list #:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests? (invoke "pytest" "-vv")))))))
(native-inputs (list python-pbr python-pytest))
(propagated-inputs (list python-decorator python-py))
(home-page "https://github.com/invl/retry")
(synopsis "Retry decorator")
(description
"@code{retry} is an easy to use retry decorator for Python. It can be
used to retry a function a given number of times.")
(license license:asl2.0)))
(define-public python-pivy
(package
(name "python-pivy")
(version "0.6.8")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/coin3d/pivy")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "00l4r06dwmgn8h29nrl3g3yv33cfyizyylk28x1j95qyj36sggfb"))))
(build-system python-build-system)
(arguments
(list
;; The test suite fails due to an import cycle between 'pivy' and '_coin'
#:tests? #f
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'patch-cmake-include-dirs
(lambda _
;; Patch buildsystem to respect Coin3D include directory
(substitute* "CMakeLists.txt"
(("\\$\\{SoQt_INCLUDE_DIRS}")
"${Coin_INCLUDE_DIR};${SoQt_INCLUDE_DIRS}")))))))
(native-inputs
(list cmake swig))
(inputs
(list python-wrapper
qtbase-5
libxi
libice
glew
coin3d))
(home-page "https://github.com/coin3d/pivy")
(synopsis "Python bindings to Coin3D")
(description
"Pivy provides python bindings for Coin, a 3D graphics library with an
Application Programming Interface based on the Open Inventor 2.1 API.")
(license license:isc)))
(define-public python-crayons
(package
(name "python-crayons")
(version "0.4.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "crayons" version))
(sha256
(base32
"0gw106k4b6y8mw7pp52awxyplj2bwvwk315k4sywzwh0g1abfcxx"))))
(build-system python-build-system)
(propagated-inputs
(list python-colorama))
(home-page "https://github.com/MasterOdin/crayons")
(synopsis "TextUI colors for Python")
(description "This package gives you colored strings for the terminal.
Crayons automatically wraps a given string in the foreground color and
restores the original state after the string is printed.")
(license license:expat)))
(define-public python-sane
(package
(name "python-sane")
(version "2.9.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri name version))
(sha256
(base32
"1pi597z94n2mkd821ln52fq0g727n2jxfskf280ip3kf7jw8w294"))))
(build-system python-build-system)
(native-inputs
(list python-pytest))
(inputs
(list sane-backends))
(home-page "https://github.com/python-pillow/Sane")
(synopsis "Python interface to the SANE scanner")
(description "This package provides Python interface to the SANE scanner
and frame grabber interface.")
(license (license:non-copyleft
;; Yet another variant of the X/MIT license.
"https://github.com/python-pillow/Sane/blob/master/COPYING"))))
(define-public python-scikit-build
(package
(name "python-scikit-build")
(version "0.17.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "scikit_build" version))
(sha256
(base32 "17awdvpzj4bn50gk4gmj20r2xcjr5y8lfl2bk582di1pdfim26mm"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'patch-cmake-executable
(lambda* (#:key inputs #:allow-other-keys)
(substitute* "skbuild/constants.py"
(("^(CMAKE_DEFAULT_EXECUTABLE = ).*" _ head)
(format #f "~a ~s~%" head
(search-input-file inputs "bin/cmake"))))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
;; These tests attempt to pull dependencies from the Internet.
(delete-file "tests/test_distribution.py")
(delete-file "tests/test_pep518.py")
;; The tests marked as "isolate" are tests that require access
;; to the network.
(invoke "pytest" "-vv" "-m" "not isolated"
"-n" (number->string (parallel-job-count))
"-k" (string-append
;; These tests attempt to write to read-only
;; Python install directory.
"not test_install_command "
"and not test_test_command "
"and not test_hello_develop "
;; These sdist-related tests fail for unknown
;; reasons (see:
;; https://github.com/scikit-build/scikit-build/issues/689).
"and not test_hello_sdist_with_base "
"and not test_manifest_in_sdist "
"and not test_hello_sdist "
"and not test_sdist_with_symlinks "
;; These are not parallel safe and fail
;; nondeterministically (see:
;; https://github.com/scikit-build/scikit-build/issues/711).
"and not test_generator_cleanup "
"and not test_generator_selection "
;; … and there's more of them
"and not test_cxx_compiler "
"and not test_fortran_compiler ")))))
(add-after 'install 'install-cmake
(lambda* (#:key outputs #:allow-other-keys)
(let ((lib (string-append (assoc-ref outputs "out")
"/lib/cmake/modules")))
(mkdir-p lib)
(with-directory-excursion "skbuild/resources/cmake"
(for-each (lambda (file) (install-file file lib))
(find-files "." "\\.cmake")))))))))
(native-inputs
(list cmake-minimal
gfortran
git-minimal/pinned ;for tests
ninja
python-coverage
python-cython
python-hatchling
python-hatch-fancy-pypi-readme
python-hatch-vcs
python-mock
python-packaging
python-path
python-pytest
python-pytest-cov
python-pytest-mock
python-pytest-virtualenv
python-pytest-xdist
python-requests
python-setuptools-scm
python-virtualenv))
(propagated-inputs
(list python-distro python-packaging python-tomli python-wheel))
(home-page "https://github.com/scikit-build/scikit-build")
(synopsis "Build system generator for Python C/C++/Fortran/Cython extensions")
(description "Scikit-build is an improved build system generator for
CPython C/C++/Fortran/Cython extensions. It has support for additional
compilers, build systems, cross compilation, and locating dependencies and
determining their build requirements. The scikit-build package is
fundamentally just glue between the @code{setuptools} Python module and
CMake.")
(license license:expat)))
(define-public python-screenkey
(package
(name "python-screenkey")
(version "1.4")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://gitlab.com/screenkey/screenkey")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1rfngmkh01g5192pi04r1fm7vsz6hg9k3qd313sn9rl9xkjgp11l"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'fix-dlopen-paths
(lambda* (#:key inputs outputs #:allow-other-keys)
(let* ((x11 (assoc-ref inputs "libx11"))
(xtst (assoc-ref inputs "libxtst")))
(substitute* "Screenkey/xlib.py"
(("libX11.so.6")
(string-append x11 "/lib/libX11.so.6")))
(substitute* "Screenkey/xlib.py"
(("libXtst.so.6")
(string-append xtst "/lib/libXtst.so.6"))))))
(add-after 'install 'wrap-screenkey
(lambda* (#:key outputs #:allow-other-keys)
(wrap-program
(string-append (assoc-ref outputs "out") "/bin/screenkey")
`("GUIX_PYTHONPATH" ":" prefix (,(getenv "GUIX_PYTHONPATH")))
`("GI_TYPELIB_PATH"
":" prefix (,(getenv "GI_TYPELIB_PATH")))))))))
(inputs
(list bash-minimal
python-distutils-extra
python-tokenize-rt
libx11
libxtst
gtk+
python-pygobject
python-pycairo
python-setuptools-git
python-babel))
(home-page "https://www.thregr.org/~wavexx/software/screenkey/")
(synopsis
"Screencast tool to display pressed keys")
(description
"Screenkey is a screencast tool to display your keys inspired by
Screenflick.")
(license license:gpl3+)))
(define-public python-jinja2-cli
(package
(name "python-jinja2-cli")
(version "0.7.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "jinja2-cli" version))
(sha256
(base32
"0vikx7v6fbvww6kfrv0k5a24jyv3ak7nindg60906pdd1m9qvkcw"))))
(build-system python-build-system)
(propagated-inputs
(list python-jinja2))
(native-inputs
(list python-flake8 python-jinja2 python-pytest))
(home-page "https://github.com/mattrobenolt/jinja2-cli")
(synopsis "Command-line interface to Jinja2")
(description
"This package provides a command-line interface (CLI) to the Jinja2
template engine.")
(license license:bsd-3)))
(define-public python-readability
(package
(name "python-readability")
(version "0.3.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "readability" version))
(sha256
(base32
"1b8gq3g2zwvx0aivvdg56cc0bn7xw6f2v6psmxdx9aiipkw0s0zr"))))
(build-system python-build-system)
(home-page
"https://github.com/andreasvc/readability/")
(synopsis
"Measure the readability of a given text using surface
characteristics")
(description
"This package provides a Python library that is an implementation of
traditional readability measures based on simple surface
characteristics. These measures are basically linear regressions based on the
number of words, syllables, and sentences.")
(license license:asl2.0)))
(define-public python-readability-lxml
(package
(name "python-readability-lxml")
(version "0.8.1")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/buriy/python-readability")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"13nfy2v0pbbf62jn9qwgi489gg97hbb22q6w3f78mnvjxd2m19rh"))
(snippet
#~(begin (delete-file "readability/compat/two.py")))))
(build-system python-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "python" "-m" "pytest" "-v" "tests/")))))))
(propagated-inputs (list python-chardet python-cssselect python-lxml))
(native-inputs (list python-timeout-decorator python-pytest))
(home-page "http://github.com/buriy/python-readability")
(synopsis "HTML to text parser")
(description
"This package provides classes and function that strip gratuitous markup
from web pages to make them easier to read.")
(license license:asl2.0)))
(define-public python-listparser
(package
(name "python-listparser")
(version "0.18")
(source
(origin
(method url-fetch)
(uri (pypi-uri "listparser" version))
(sha256
(base32
"0hdqs1mmayw1r8yla43hgb4d9y3zqs5483vgf8j9ygczkd2wrq2b"))))
(build-system python-build-system)
(home-page
"https://github.com/kurtmckee/listparser")
(synopsis
"Parse subscription lists in Python")
(description
"This package provides a Python library that can parse OPML, FOAF, and
iGoogle subscription lists.")
(license license:expat)))
(define-public python-smartypants
(package
(name "python-smartypants")
(version "2.0.1")
(source
(origin
;; There's no source tarball for 2.0.1 on PyPI.
(method git-fetch)
(uri (git-reference
(url "https://github.com/leohemsted/smartypants.py")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "00p1gnb9pzb3svdq3c5b9b332gsp50wrqqa39gj00m133zadanjp"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
;; Its `setup.py test` doesn't report failure with exit status, so
;; we use `nose` instead.
(lambda _
(invoke "nosetests" "-v" "--exclude=^load_tests$"))))))
(native-inputs
;; For tests.
(list python-docutils python-nose python-pygments))
(home-page "https://github.com/leohemsted/smartypants.py")
(synopsis "Translate punctuation characters into smart quotes")
(description
"@command{smartpants} can perform the following transformations:
@enumerate
@item Straight quotes ( \" and ' ) into \"curly\" quote HTML entities
@item Backticks-style quotes (``like this'') into \"curly\" quote HTML
entities
@item Dashes (-- and ---) into en- and em-dash entities
@item Three consecutive dots (... or . . .) into an ellipsis entity
@end enumerate")
(license license:bsd-3)))
(define-public python-typogrify
(package
(name "python-typogrify")
(version "2.0.7")
(source (origin
(method url-fetch)
(uri (pypi-uri "typogrify" version))
(sha256
(base32
"0f6b2gnnxjbx1fbmkcscc6qjr4hi78kwm1wx4b766ha3va66dr4b"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
(invoke "nosetests" "-v"))))))
(propagated-inputs
(list python-smartypants))
(native-inputs
;; For tests.
(list python-nose))
(home-page "https://github.com/mintchaos/typogrify")
(synopsis "Filters to transform text into typographically-improved HTML")
(description
"@code{typogrify} provides a set of custom filters that automatically
apply various transformations to plain text in order to yield
typographically-improved HTML. While often used in conjunction with Jinja and
Django template systems, the filters can be used in any environment.")
(license license:bsd-3)))
(define-public python-ld
(package
(name "python-ld")
(version "0.5.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ld" version))
(sha256
(base32
"1k4ydp5rgkv4985v459kcl06i1igjm1ywvh2vkbi9ck1zyyri1z5"))))
(build-system python-build-system)
(propagated-inputs
(list python-six))
(home-page "https://github.com/nir0s/ld")
(synopsis "OS platform information API")
(description
"The ld package provides information about the GNU/Linux distribution it
runs on, such as a reliable machine-readable ID, or version information.")
(license license:asl2.0)))
(define-public python-quicktions
(package
(name "python-quicktions")
(version "1.11")
(source
(origin
(method url-fetch)
(uri (pypi-uri "quicktions" version))
(sha256
(base32
"1px21a6x527i1bsr2p6bbf3jziqpvd1vjkvvzh13gsy4iip0yvzn"))
(modules '((guix build utils)))
(snippet
'(begin
;; This file is generated by Cython.
(delete-file "src/quicktions.c") #t))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(add-before 'build 'cythonize-sources
(lambda _
(with-directory-excursion "src"
(invoke "cython" "quicktions.pyx"))))
(replace 'check
(lambda* (#:key tests? inputs outputs #:allow-other-keys)
(when tests?
(add-installed-pythonpath inputs outputs)
(invoke "pytest"))
#t)))))
(native-inputs
(list python-cython python-pytest))
(home-page "https://github.com/scoder/quicktions")
(synopsis "Fast fractions data type for rational numbers")
(description
"This package provides fast fractions data type for rational numbers. It
is the cythonized version of @code{fractions.Fraction}.")
(license license:psfl)))
(define-public python-pathvalidate
(package
(name "python-pathvalidate")
(version "2.4.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pathvalidate" version))
(sha256
(base32 "0s14ycjgb44lxr2wg8lrq3b7kybmmrbf7yqz47xrqgn2gr6dk6rw"))))
(build-system python-build-system)
(arguments
'(#:tests? #f))
;; Tests disabled because of circular dependencies.
;; pathvalidate tests depend on pytest-md-report, which
;; depends on pathvalidate.
(native-inputs
(list python-allpairspy python-click python-faker python-pytest))
(home-page "https://github.com/thombashi/pathvalidate")
(synopsis "Sanitize strings representing paths")
(description
"@code{pathvalidate} is a Python library to sanitize/validate strings
representing paths or filenames.")
(license license:expat)))
(define-public python-escapism
(package
(name "python-escapism")
(version "1.0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "escapism" version))
(sha256
(base32
"1v74243wifcwhj5zkdiispxc9kb1xvnfzilg8bq308pjnkgnn9bk"))))
(build-system python-build-system)
(home-page "https://github.com/minrk/escapism")
(synopsis "Simple, generic library for escaping strings")
(description
"This Python library provides a programming interface to, given a set of
safe characters and an escape character, escape safe strings and unescape the
result.")
(license license:expat)))
(define-public python-recommonmark
(package
(name "python-recommonmark")
(version "0.7.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "recommonmark" version))
(sha256
(base32
"0rvdd2ikdr0yg6cx6594fdzn53cmdc0g0i6qsbcdq8i2kxjdpd5x"))))
(build-system python-build-system)
(propagated-inputs
(list python-commonmark python-docutils python-sphinx))
(arguments
'(#:phases (modify-phases %standard-phases
(add-after 'unpack 'delete-test-sphinx
(lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out")))
(delete-file "tests/test_sphinx.py")))))))
(home-page "https://github.com/readthedocs/recommonmark")
(synopsis "Docutils-compatibility bridge to CommonMark")
(description
"This package provides a docutils-compatibility bridge to CommonMark that
lets you write CommonMark inside of Docutils & Sphinx projects.")
(license license:expat)))
(define-public python-redo
;; The latest release isn't tagged:
;; https://github.com/mozilla-releng/redo/issues/76
(let ((commit "50cfe8e3656f253f9e51df3a998530351d2d9a8c")
(revision "0"))
(package
(name "python-redo")
(version (git-version "2.0.4" revision commit))
(source
(origin
(method git-fetch) ; There are no tests in the PyPI release.
(uri (git-reference
(url "https://github.com/mozilla-releng/redo")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32 "0xpylx97qr4ikdhsr208ri41007mpp57a4n8mmlmlqmdljmsdpdb"))))
(build-system python-build-system)
(native-inputs
(list python-mock
python-pytest))
(arguments
(list #:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
;; The project uses tox to run the tests via pytest.
(invoke "pytest")))))))
(home-page "https://github.com/mozilla-releng/redo")
(synopsis "Utilities to retry Python callables")
(description "Redo provides various means to add seamless ability to
retry to any Python callable.")
(license license:mpl2.0))))
(define-public python-pyhull
(package
(name "python-pyhull")
(version "2015.2.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pyhull" version))
(sha256
(base32
"091sph52c4yk1jlm5w8xidxpzbia9r7s42bnb23q4m4b56ihmzyj"))))
(build-system python-build-system)
(propagated-inputs
(list python-numpy))
(home-page "https://github.com/materialsvirtuallab/pyhull")
(synopsis "Python wrapper to Qhull")
(description
"This package provides a Python wrapper to @uref{http://www.qhull.org/,
Qhull} for the computation of the convex hull, Delaunay triangulation, and
Voronoi diagram.")
(license license:expat)))
(define-public python-opcodes
;; There are no tags in this repo, but 'opcodes/__init__.py' specifies a
;; version number, which is what we use here.
(let ((commit "0f7c7d63f5e13ce5a89d9acc3934f1b6e247ec1f"))
(package
(name "python-opcodes")
(version "0.3.14") ;from 'opcodes/__init__.py'
(home-page "https://github.com/Maratyszcza/Opcodes")
(source (origin
(method git-fetch)
(uri (git-reference (url home-page) (commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"1fvxkr83gfl9f0ikd2wl2lzazzya2qz1hk4yn2a0pq742brbwpys"))))
(build-system python-build-system)
(synopsis "Database of processor instructions and opcodes")
(description
"This project documents instruction sets in a format convenient for
tools development. An instruction set is represented by three files:
@itemize
@item an XML file that describes instructions;
@item an XSD file that describes the structure of the XML file;
@item a Python module that reads the XML file and represents it as a set of
Python objects;
@end itemize
It currently provides descriptions for most user-mode x86, x86_64, and k1om
instructions up to AVX-512 and SHA (including 3dnow!+, XOP, FMA3, FMA4, TBM
and BMI2).")
(license license:bsd-2))))
(define-public python-ailment
(package
(name "python-ailment")
;; Must be the same version as python-angr.
(version "9.2.46")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ailment" version))
(sha256
(base32 "073fcssbjis1ckwv2w0dcz2dfl6715bj4d4qdhspajj911mvng2f"))))
(build-system pyproject-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(replace 'check
;; Many tests are skipped due to cyclic dependencies.
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(with-directory-excursion "tests"
(invoke "python" "-m" "unittest"))))))))
(home-page "https://github.com/angr/ailment")
(synopsis "The angr intermediate language")
(description
"This Python module implements an @acronym{IL, Intermediate Language},
also known as @acronym{IR, Intermediate Representation}, used by the angr
binary analysis platform.")
(license license:bsd-2)))
(define-public python-cle
(package
(name "python-cle")
;; Must be the same version as python-angr.
(version "9.2.46")
(source
(origin
(method url-fetch)
(uri (pypi-uri "cle" version))
(sha256
(base32 "0mswv9gd2p2ws7zfsshqv5ybbj27wkdwakdcknq4vsrx9ry9k4yc"))))
(build-system pyproject-build-system)
(arguments
(list
#:tests? #f))
(propagated-inputs (list python-pefile python-pyelftools python-pyvex
python-sortedcontainers))
(native-inputs (list python-cffi))
(home-page "https://github.com/angr/cle")
(synopsis "Python loader for binaries and their associated libraries")
(description
"CLE loads binaries and their associated libraries, resolves
imports and provides an abstraction of process memory the same way as if
it was loader by the operating system's loader.")
(license license:bsd-2)))
(define-public python-pyvex
(package
(name "python-pyvex")
;; Must be the same version as python-angr.
(version "9.2.46")
(source
(origin
(method url-fetch)
(patches (search-patches "python-pyvex-remove-angr-dependency.patch"))
(uri (pypi-uri "pyvex" version))
(sha256
(base32 "1v64rn7gxy6fg065bgsy38z6r494k5ri5r6sn4g08hjj32ihx1ka"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases #~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(with-directory-excursion "tests"
(invoke "python" "-m" "unittest")))))
(add-before 'build 'set-cc
(lambda _
(setenv "CC" #$(cc-for-target))
(setenv "CC_NATIVE" "gcc"))))))
(propagated-inputs (list python-archinfo python-bitstring python-cffi))
(home-page "https://github.com/angr/pyvex")
(synopsis "Python interface to libVEX and VEX IR")
(description
"This package provides a Python interface the libVEX and VEX IR.
VEX is the intermediate representation (also known as intermediate
language) used by the Valgrind analysis tool. As such, VEX is designed
to enable all kinds of binary analysis tasks.")
(license license:bsd-2)))
(define-public python-claripy
(package
(name "python-claripy")
;; Must be the same version as python-angr.
(version "9.2.46")
(source
(origin
;; Fetching from Git as pypi release doesn't include all test files.
(method git-fetch)
(uri (git-reference
(url "https://github.com/angr/claripy")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0nmawpi1596d9plafrp2db36cjsidy2fagkzkja51jwlx2m1ngai"))
(modules '((guix build utils)))
(snippet '(begin
(substitute* "setup.cfg"
;; Relax the z3 version constraint.
;; See https://github.com/angr/claripy/commit/d1fe2df
(("z3-solver==4.10.2.0")
""))))))
(build-system pyproject-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(with-directory-excursion "tests"
(invoke "python" "-m" "unittest"))))))))
(propagated-inputs (list python-cachetools python-decorator python-pysmt
z3))
(home-page "https://github.com/angr/claripy")
(synopsis "Abstraction layer for constraint solvers")
(description
"This Python module provides an abstraction layer for interacting
with constraint solvers. Specifically, it is intended to be used with
SMT solvers and is built on top of the Z3 solver.")
(license license:bsd-2)))
(define-public python-pysmt
(package
(name "python-pysmt")
(version "0.9.5")
(source
(origin
;; Fetching from Git as pypi release doesn't include all test files.
(method git-fetch)
(patches (search-patches "python-pysmt-fix-pow-return-type.patch"
"python-pysmt-fix-smtlib-serialization-test.patch"))
(uri (git-reference
(url "https://github.com/pysmt/pysmt")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0hrxv23y5ip4ijfx5pvbwc2fq4zg9jz42wc9zqgqm0g0mjc9ckvh"))))
(build-system pyproject-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(add-before 'check 'set-pysmt-solver
(lambda _
(setenv "PYSMT_SOLVER" "z3"))))))
(native-inputs (list python-pytest))
(propagated-inputs (list z3))
(home-page "https://github.com/pysmt/pysmt")
(synopsis
"Solver-agnostic library for SMT formula manipulation and solving")
(description
"This Python module provides a solver-agnostic abstraction for
working with @acronym{SMT, Satisfiability Modulo Theory} formulas. For example,
it allows manipulation and solving such formulas.")
(license license:asl2.0)))
(define-public python-rpyc
(package
(name "python-rpyc")
(version "5.3.1")
(source
(origin
;; Fetching from Git as pypi release doesn't include all test files.
(method git-fetch)
(uri (git-reference
(url "https://github.com/tomerfiliba-org/rpyc")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32 "15mnp9qkyw3mmxmr5y4kf3xkvxyp00n892vqaqwznr7al35apgnr"))
(snippet '(begin
;; Disable deploy tests, these rely on OpenSSH and require
;; configuring the SSH client manually to accept the host key.
(delete-file "tests/test_deploy.py")
;; Disable tests requiring network access. These tests
;; presently fail with the error "Network is unreachable".
(delete-file "tests/test_registry.py")))))
(build-system pyproject-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(with-directory-excursion "tests"
(invoke "python" "-m" "unittest"))))))))
(propagated-inputs (list python-hatchling python-plumbum))
(home-page "https://github.com/tomerfiliba-org/rpyc")
(synopsis
"Remote Python Call (RPyC) is a symmetric distributed computing library")
(description
"This Python module enables remote procedure calls, clustering, and
distributed-computing. For this purpose, it makes use of object-proxying, a technique
that employs python's dynamic nature, to overcome the physical boundaries between
processes and computers, so that remote objects can be manipulated as if they
were local.")
(license license:expat)))
(define-public python-nampa
(package
(name "python-nampa")
(version "0.1.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "nampa" version))
(sha256
(base32 "0k6cq2gflpkm40qhgqbbcjmq5lq589c15bmk567qyh3d08062hvd"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-future))
(home-page "https://github.com/thebabush/nampa")
(synopsis "Python implementation of IDA Pro's FLIRT technology")
(description
"This Python module implements the @acronym{FLIRT, Fast Library Identification
and Recognition Technology}. This technology is useful for identifying
common library subroutines in disassembled binaries.")
(license license:lgpl3)))
(define-public python-mulpyplexer
(package
(name "python-mulpyplexer")
(version "0.09")
(source
(origin
(method url-fetch)
(uri (pypi-uri "mulpyplexer" version))
(sha256
(base32 "0c5xzci1djy1yi9hxxh8g67l6ms8r7ad7ja20pv8hfbdysdrwkhl"))))
(build-system pyproject-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "python" "mulpyplexer.py")))))))
(home-page "https://github.com/zardus/mulpyplexer/")
(synopsis "Multiplexes interactions with lists of Python objects")
(description "This module provides utilities for multiplexing
interactions with lists of Python objects.")
(license license:bsd-2)))
(define-public python-itanium-demangler
(package
(name "python-itanium-demangler")
(version "1.1")
(source
(origin
(method git-fetch)
(uri (git-reference
;; PyPI only provides wheels and no source code.
(url "https://github.com/whitequark/python-itanium_demangler")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1q47aqm5z3db6pasdzw05d6236vnb8hnapfy88fcmn9dr5ym98r3"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(with-directory-excursion "tests"
(invoke "python" "-m" "unittest"))))))))
(home-page "https://github.com/whitequark/python-itanium_demangler/")
(synopsis "Pure Python Itanium C++ ABI demangler")
(description
"This Python module provides an implementation of the Itanium C++ ABI symbol
mangling language. The demangler generates an abstract syntax tree from
mangled symbols, which can be used for directly extracting type information.")
(license license:bsd-0)))
(define-public python-angr
(package
(name "python-angr")
(version "9.2.46")
(source
(origin
;; Fetching from Git as pypi release doesn't include all test files.
(method git-fetch)
(patches (search-patches "python-angr-addition-type-error.patch"
"python-angr-check-exec-deps.patch"))
(uri (git-reference
(url "https://github.com/angr/angr")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "18y9wyf7va7gvp9zd6lhw82j9a2x2ajsvbawh96xnxzml0jwlwjm"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases #~(modify-phases %standard-phases
(add-after 'unpack 'patch-tests
(lambda* (#:key inputs #:allow-other-keys)
(let ((coreutils (assoc-ref inputs "coreutils")))
(substitute* "tests/test_vault.py"
(("/bin/false")
(which "false")))
(substitute* "tests/common.py"
(("\\[\"cc\"\\]")
"[\"gcc\"]")))))
(replace 'check
(lambda* (#:key inputs tests? #:allow-other-keys)
(when tests?
(copy-recursively #$(this-package-native-input "binaries")
"../binaries")
(with-directory-excursion "tests"
;; test_mips32_missing_offset_in_instructions fails
;; with capstone 5 and passes with capstone 4. Might
;; be a capstone regressions, needs investigation.
;;
;; test_concrete_memset is a non-deterministic benchmark.
(invoke "pytest" "-vv" "-x" "--dist" "loadfile"
"-k" "not test_mips32_missing_offset_in_instructions and not test_concrete_memset"
"-n" (number->string (parallel-job-count)))))))
(add-before 'build 'set-cc
(lambda _
(setenv "CC" "gcc"))))))
(propagated-inputs (list python-ailment
python-archinfo
python-cachetools
python-cffi
python-claripy
python-cle
python-colorama
python-cppheaderparser
python-dpkt
python-gitpython
python-mulpyplexer
python-nampa
python-networkx
python-protobuf
python-psutil
python-itanium-demangler
python-pycparser
python-pyvex
python-progressbar2
python-rpyc
python-sortedcontainers
python-sqlalchemy
python-sympy
unicorn))
(native-inputs `(("python-pytest" ,python-pytest)
("python-pytest-xdist" ,python-pytest-xdist)
("binaries"
;; This repository ships several binaries used only for testing
;; purpose. The binaries are not executed and not part of the
;; angr distribution, they are only used to test angr's binary
;; analysis capabilities. In the context of the GNU FSDG, these
;; files should be considered non-functional data.
,(origin
(method git-fetch)
(uri (git-reference (url
"https://github.com/angr/binaries")
(commit (string-append "v"
version))))
(file-name (git-file-name "angr-binaries" version))
(sha256 (base32
"1f286b2239zavxzwg1184hj1zs380cr9qr549mvy3vywvm8bsmgr"))))))
(home-page "https://github.com/angr/angr")
(synopsis "Multi-architecture binary analysis toolkit")
(description
"This package provides a versatile binary analysis platform with the
ability to perform dynamic symbolic execution as well as various
static analyses directly on binaries. As such, it can be used for all
kinds of reverse engineering, vulnerability discovery, exploit
generation, and software testing purposes.")
(license license:bsd-2)))
(define-public python-peachpy
;; There is no tag in this repo.
(let ((commit "913d74c35a6b1d330e90bfc055208ce5b06b35a0")
(version "0.2.0") ;from 'peachpy/__init__.py'
(revision "2"))
(package
(name "python-peachpy")
(version (git-version version revision commit))
(home-page "https://github.com/Maratyszcza/PeachPy")
(source (origin
(method git-fetch)
(uri (git-reference (url home-page) (commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"1wnqxspxsacw4556q0b9fbw11nhrkgn6gs8g43jdnpa35f3z9kb6"))
(patches (search-patches "python-peachpy-determinism.patch"))))
(build-system python-build-system)
(arguments
'(#:phases (modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "nosetests")))))))
(native-inputs
(list python-nose python-rednose python-setuptools))
(propagated-inputs
(list python-six python-opcodes))
(synopsis "Efficient assembly code generation in Python")
(description
"PeachPy is a Python framework for writing high-performance assembly kernels.
PeachPy aims to simplify writing optimized assembly kernels while preserving
all optimization opportunities of traditional assembly.
PeachPy can generate ELF, MS-COFF, Mach-O object files, and assembly listings
for the Go language tool chain; it adapts to different calling conventions and
application binary interfaces (ABIs); it takes care of register allocation; it
supports x86_64 instructions up to AVX-512 and SHA.")
(supported-systems '("x86_64-linux"))
(license license:bsd-2))))
(define-public python-sgmllib3k
(let ((commit "799964676f35349ca2dd04503e34c2b3ad522c0d")
(revision "1"))
(package
(name "python-sgmllib3k")
(version
(git-version "1.0.0" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/hsoft/sgmllib")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"0bzf6pv85dzfxfysm6zbj8m40hp0xzr9h8qlk4hp3nmy88rznqvr"))
(patches (search-patches "python-sgmllib3k-assertions.patch"))))
(build-system python-build-system)
(home-page "https://github.com/hsoft/sgmllib")
(synopsis "Python 3 port of sgmllib")
(description "This package provides an unmaintained port of sgmllib to
Python 3. It is used to parse text files formatted in @acronym{SGML,Standard
Generalized Mark-up Language}.")
(license license:bsd-3))))
(define-public python-cwcwidth
(package
(name "python-cwcwidth")
(version "0.1.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "cwcwidth" version))
(sha256
(base32
"1azrphpkcyggg38xvkfb9dpc4xmmm90p02kf8dkqd4d6j5w96aj8"))))
(build-system python-build-system)
(native-inputs
(list python-cython python-pytest python-setuptools-scm python-toml
python-wheel))
(home-page
"https://github.com/sebastinas/cwcwidth")
(synopsis "Python bindings for wc(s)width")
(description "This package provides bindings for wcwidth and wcswidth
functions defined in POSIX.1-2001 and POSIX.1-2008.")
(license license:expat)))
(define-public python-pyan3
(package
(name "python-pyan3")
(version "1.2.0")
(source
(origin
;; Source tarball on PyPI lacks tests.
(method git-fetch)
(uri (git-reference
(url "https://github.com/Technologicat/pyan")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1367x25rcy2y8f0x9c2dbxl2qgdln3arr7ddyzybz2c28g6jrv5z"))
(patches (search-patches "python-pyan3-fix-positional-arguments.patch"
"python-pyan3-fix-absolute-path-bug.patch"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
;; Extend PYTHONPATH so the built package will be found.
(setenv "GUIX_PYTHONPATH"
(string-append (getcwd) ":" (getenv "GUIX_PYTHONPATH")))
(invoke "pytest")))))))
(native-inputs
(list python-pytest python-pytest-cov python-wheel))
(propagated-inputs
(list python-jinja2))
(home-page "https://github.com/Technologicat/pyan")
(synopsis "Offline call graph generator for Python 3")
(description "Pyan takes one or more Python source files, performs
a (rather superficial) static analysis, and constructs a directed graph of the
objects in the combined source, and how they define or use each other. The
graph can be output for rendering by GraphViz or yEd.")
(license license:gpl2)))
(define-public python-multipledispatch
(package
(name "python-multipledispatch")
(version "0.6.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "multipledispatch" version))
(sha256
(base32
"1slblghfjg9fdi9zpd7gmrkvfbv20nrdgnrymcnbky8bzm8i9ax7"))))
(build-system python-build-system)
(propagated-inputs (list python-six))
(home-page "https://github.com/mrocklin/multipledispatch/")
(synopsis "Multiple dispatch for Python based on pattern matching")
(description "This library provides an efficient mechanism for overloading
function implementations based on the types of the arguments.")
(license license:bsd-3)))
(define-public python-multimethod
(package
(name "python-multimethod")
(version "1.10")
(source
(origin
;; No tests in the PyPI tarball.
(method git-fetch)
(uri (git-reference
(url "https://github.com/coady/multimethod")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "07xv92q7f4bkp6dzkqvcv0zxr11729qdak4s3ldmbhdwgsf44g5h"))))
(build-system pyproject-build-system)
(native-inputs (list python-pytest))
(home-page "https://github.com/coady/multimethod")
(synopsis "Python support for multiple argument dispatching")
(description
"This package provides a decorator for adding multiple argument
dispatching to functions. The decorator creates a multimethod object as
needed and registers the function with its annotations.")
(license license:asl2.0)))
(define-public python-logical-unification
(package
(name "python-logical-unification")
(version "0.4.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "logical-unification" version))
(sha256
(base32
"0j57953hi7kg2rl0163vzjzsvzdyjimnklhx6idf5vaqqf1d3p1j"))))
(build-system python-build-system)
(propagated-inputs
(list python-multipledispatch python-toolz))
(home-page "https://github.com/pythological/unification/")
(synopsis "Logical unification in Python for solving symbolic expressions")
(description "This library provides algorithms and data types for solving
symbolic expressions in pure Python using the technique of logical unification.")
(license license:bsd-3)))
(define-public python-looseversion
(package
(name "python-looseversion")
(version "1.3.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "looseversion" version))
(sha256
(base32 "17k625ws83lwksa7yyy4mn0i39lmxgrzxihn22l335dvyvrnbppb"))))
(build-system pyproject-build-system)
(arguments
(list
;; No tests provided.
#:tests? #f))
(native-inputs
(list python-hatchling))
(home-page "https://github.com/effigies/looseversion")
(synopsis "Version numbering for anarchists and software realists")
(description
"This package provides a drop-in replacement for the original
@code{LooseVersion}. It implements an identical interface and comparison
logic to @code{LooseVersion}. The only major change is that a
@code{looseversion.LooseVersion} is comparable to a
@code{distutils.version.LooseVersion}, which means tools should not need to
worry whether all dependencies that use LooseVersion have migrated.")
(license license:psfl)))
(define-public python-cons
(package
(name "python-cons")
(version "0.4.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "cons" version))
(sha256
(base32
"0w9giq196wps7mbm47c4shdzs5yvwvqajqzkim2p92i51sm5qgvm"))))
(build-system python-build-system)
(native-inputs
(list python-pytest python-toml))
(propagated-inputs
(list python-logical-unification))
(home-page "https://github.com/pythological/python-cons")
(synopsis "Cons cell data structures and related algorithms for Python")
(description
"This library implements algorithms and data structures for Lisp-style
cons cells in Python.")
(license license:lgpl3+)))
(define-public python-etuples
(package
(name "python-etuples")
(version "0.3.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "etuples" version))
(sha256
(base32
"0jhfyp177v37rl0i7wqfx7q6s5qkz027hl283d1x8d0vm3w0zqc8"))))
(build-system python-build-system)
(propagated-inputs
(list python-cons python-multipledispatch))
(home-page "https://github.com/pythological/etuples")
(synopsis "S-expressions in Python")
(description
"This library implements eval'able S-expression in Python using tuple-like objects.")
(license license:asl2.0)))
(define-public python-minikanren
(package
(name "python-minikanren")
(version "1.0.1")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/pythological/kanren")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0g7wfj5hxalwz7k1301nsjqhjpzsif1bj6wjm2x2kavlm2ypv9jc"))))
(build-system python-build-system)
(arguments
'(#:phases (modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "python" "-m" "pytest" "-v" "tests/" "kanren/"))
#t)))))
(native-inputs
(list python-coveralls
python-pydocstyle
python-pytest
python-pytest-cov
python-pylint
python-black
python-sympy
python-versioneer
python-coverage))
(propagated-inputs
(list python-toolz python-cons python-multipledispatch
python-etuples python-logical-unification))
(home-page "https://github.com/pythological/kanren")
(synopsis "Relational logic programming in pure Python")
(description
"The minikanren library provides an algorithmic core for computer algebra
systems in Python.")
(license license:bsd-3)))
(define-public python-dotenv
(package
(name "python-dotenv")
(version "0.20.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "python-dotenv" version))
(sha256
(base32 "13s9imfd0k4d7b1qy5wfqzw5vyj6rhmcrccsdz1l4g39b55b1qxp"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? inputs outputs #:allow-other-keys)
(when tests?
(add-installed-pythonpath inputs outputs)
(setenv "PATH" (string-append (getenv "PATH") ":"
(assoc-ref outputs "out") "/bin"))
;; Skip the ipython tests.
(delete-file "tests/test_ipython.py")
(invoke "python" "-m" "pytest")))))))
(propagated-inputs
(list python-click))
(native-inputs
(list python-mock python-pytest python-sh))
(home-page "https://saurabh-kumar.com/python-dotenv/")
(synopsis "Setup environment variables according to .env files")
(description
"This package provides the @code{python-dotenv} Python module to read
key-value pairs from a @code{.env} file and set them as environment variables.")
(license license:bsd-3)))
(define-public python-dotenv-0.13.0
(package (inherit python-dotenv)
(name "python-dotenv")
(version "0.13.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "python-dotenv" version))
(sha256
(base32
"0x5dagmfn31phrbxlwacw3s4w5vibv8fxqc62nqcdvdhjsy0k69v"))))))
(define-public date2name
(let ((commit "6c8f37277e8ec82aa50f90b8921422be30c4e798")
(revision "1"))
(package
(name "date2name")
(version (git-version "0.0" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/novoid/date2name")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"1vq96b7n16d932nyfhnzwdwxff0zrqanidmwr4cxj2p67ad9y3w7"))))
(build-system python-build-system)
(arguments
`(#:tests? #f ; no tests
#:phases
(modify-phases %standard-phases
(delete 'build)
(replace 'install
(lambda* (#:key outputs #:allow-other-keys)
(let* ((bindir (string-append (assoc-ref outputs "out") "/bin"))
(binary (string-append bindir "/date2name")))
(mkdir-p bindir)
(copy-file "date2name/__init__.py" binary)
(chmod binary #o555)))))))
(synopsis "Handling time-stamps and date-stamps in file names")
(description "By default, date2name gets the modification time of matching
files and directories and adds a datestamp in standard ISO 8601+ format
YYYY-MM-DD at the beginning of the file or directory name.")
(home-page "https://github.com/novoid/date2name")
(license license:gpl3+))))
(define-public python-braintree
(package
(name "python-braintree")
(version "4.12.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "braintree" version))
(sha256
(base32 "19kli85q18p80nsn8fm4ql6axpr7bllfqg5chv2ywhr8zr8bssll"))))
(build-system python-build-system)
(propagated-inputs
(list python-requests))
(home-page
"https://developers.braintreepayments.com/python/sdk/server/overview")
(synopsis "Braintree Python Library")
(description "The Braintree Python SDK provides integration access to the
Braintree Gateway. Braintree is a US-based payments service provider.")
(license license:expat)))
(define-public python-markuppy
(package
(name "python-markuppy")
(version "1.14")
(source
(origin
(method url-fetch)
(uri (pypi-uri "MarkupPy" version))
(sha256
(base32 "0pqdmpxbr8iq22b4css2gz5z6s01ddpzyj25x27kgbs2lp0f5phs"))))
(build-system python-build-system)
(home-page "https://github.com/tylerbakke/MarkupPy")
(synopsis "Pythonic HTML/XML generator")
(description "This Python module attempts to make it easier to generate
HTML/XML from a Python program in an intuitive, lightweight, customizable and
pythonic way.")
(license license:expat)))
(define-public python-tablib
(package
(name "python-tablib")
(version "3.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "tablib" version))
(sha256
(base32 "03f1z6jq6rf67gwhbm9ma4rydm8h447a5nh5lcs5l8jg8l4aqg7q"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(setenv "GUIX_PYTHONPATH"
(string-append (getcwd) "/build/lib:"
(getenv "GUIX_PYTHONPATH")))
(invoke "pytest")))))))
(native-inputs
(list python-pandas ;; required for test-suite
python-pytest python-pytest-cov python-setuptools-scm))
(propagated-inputs
(list python-markuppy
python-odfpy
python-openpyxl
python-pyyaml
python-tabulate
python-xlrd
python-xlwt))
(home-page "https://tablib.readthedocs.io")
(synopsis "Format agnostic tabular data library")
(description "@code{tablib} is a format-agnostic tabular dataset library,
written in Python. Supported output formats are Excel (Sets + Books),
JSON (Sets + Books), YAML (Sets + Books), HTML (Sets), Jira (Sets),
TSV (Sets), ODS (Sets), CSV (Sets), and DBF (Sets).
@code{tablib} also supports Pandas DataFrames (Sets). Anyhow, since pandas is
quite huge, this Guix package doesn't depend on pandas. In case, just also
install @code{python-pandas}.")
(license license:expat)))
(define-public python-csb43
(package
(name "python-csb43")
(version "0.9.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "csb43" version))
(sha256
(base32 "0r0csl9npncnkfafg3rg6xr38d1qr0sxvq7wn7mg9bq41hvvh1si"))))
(build-system python-build-system)
(native-inputs
(list python-lxml))
(propagated-inputs
(list python-pycountry python-pyyaml python-tablib))
(home-page "https://bitbucket.org/wmj/csb43")
(synopsis "Tools for converting from the Spanish banks' format CSB norm
43 (CSB43)")
(description "This package provides tools to convert files in the format
used by multiple Spanish banks (standard 43 of the Spanish Banking Council
[CSB43] / Spanish Banking Association [AEB43]) to other formats.
Supported output formats are: OFX, HomeBank CSV, HTML, JSON, ODS (OpenDocument
spreadsheet), CSV, TSV, XLS, XLSX (Microsoft Excel spreadsheet), and YAML.")
(license license:lgpl3)))
(define-public python-febelfin-coda
(package
(name "python-febelfin-coda")
(version "0.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "febelfin-coda" version))
(sha256
(base32 "1isnf87gxlvfbmackv7b2c978vmnj7ij0v4svhyjl8pbb9hwjsvm"))))
(build-system python-build-system)
(home-page "https://coda.b2ck.com/")
(synopsis "Module to parse Belgian CODA files")
(description "This package provides a module to parse Coded statement of
account (CODA) files as defined be the Belgian Febelfin bank standard.")
(license license:bsd-3)))
(define-public python-ofxparse
(package
(name "python-ofxparse")
(version "0.21")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ofxparse" version))
(sha256
(base32 "19y4sp5l9jqiqzzlbqdfiab42qx7d84n4xm4s7jfq397666vcyh5"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "nosetests" "-v")))))))
(native-inputs
(list python-nose))
(propagated-inputs
(list python-beautifulsoup4 python-lxml python-six))
(home-page "http://sites.google.com/site/ofxparse")
(synopsis "Tools for working with the OFX (Open Financial Exchange) file
format")
(description "@code{ofxparse} is a parser for Open Financial
Exchange (.ofx) format files. OFX files are available from almost any online
banking site, so they work well if you want to pull together your finances
from multiple sources. Online trading accounts also often provide account
statements in OFX files.")
(license license:expat)))
(define-public python-rfc3339-validator
(package
(name "python-rfc3339-validator")
(version "0.1.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "rfc3339_validator" version))
(sha256
(base32 "0srg0b89aikzinw72s433994k5gv5lfyarq1adhas11kz6yjm2hk"))))
(build-system python-build-system)
(native-inputs (list python-hypothesis
python-pytest
python-pytest-runner
python-strict-rfc3339))
(propagated-inputs (list python-six))
(home-page "https://github.com/naimetti/rfc3339-validator")
(synopsis "Python RFC3339 validator")
(description "This package provides a pure Python RFC3339 validator.")
(license license:expat)))
(define-public python-strict-rfc3339
(package
(name "python-strict-rfc3339")
(version "0.7")
(source
(origin
(method git-fetch) ;no tests in pypi release
(uri (git-reference
(url "https://github.com/danielrichman/strict-rfc3339")
(commit (string-append "version-" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0b12bh9v9gwkm89kxbidxw2z81lg8fx1v5fzgs313v1wgx6qb09p"))))
(build-system python-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv"
;; The timestamp to local offset tests fail due to
;; missing timezone data (see:
;; https://github.com/danielrichman/strict-rfc3339/issues/9).
"-k" "not LocalOffset")))))))
(native-inputs (list python-pytest))
(home-page "https://github.com/danielrichman/strict-rfc3339")
(synopsis "RFC3339 procedures library")
(description "The @code{strict_rfc3339} Python module provides strict,
simple, lightweight RFC3339 procedures. It enables or aims to:
@itemize
@item Convert UNIX timestamps to and from RFC3339.
@item Produce RFC3339 strings with a UTC offset (Z) or with the offset that
the C time module reports is the local timezone offset.
@item Be simple with minimal dependencies/libraries.
@item Avoid timezones as much as possible.
@item Be very strict and follow RFC3339.
@end itemize")
(license license:gpl3+)))
(define-public python-stripe
(package
(name "python-stripe")
(version "2.60.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "stripe" version))
(sha256
(base32 "0258lzh4qikhinfggnlfh5aklcvg7lrvl8giqrh0yf0l61wvfrl9"))))
(build-system python-build-system)
(arguments
'(#:tests? #f)) ;; tests require network
(propagated-inputs
(list python-requests))
(home-page "https://github.com/stripe/stripe-python")
(synopsis "Python bindings for the Stripe financial services' API")
(description "This package provides access to the Stripe financial
services' API. It includes a pre-defined set of classes for API resources
that initialize themselves dynamically from API responses which makes it
compatible with a wide range of versions of the Stripe API.")
(license license:expat)))
(define-public python-platformdirs
(package
(name "python-platformdirs")
(version "3.10.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "platformdirs" version))
(sha256
(base32 "0vbzyw1k6wvg8gv9cg99ds5pri007c6rqx9668d6kk6pnbd9cmml"))))
(build-system pyproject-build-system)
(native-inputs
(list python-appdirs
python-hatchling
python-hatch-vcs
python-pytest
python-pytest-mock))
(home-page "https://github.com/platformdirs/platformdirs")
(synopsis "Determine the appropriate platform-specific directories")
(description "When writing applications, finding the right location to
store user data and configuration varies per platform. Even for
single-platform apps, there may by plenty of nuances in figuring out the right
location. This small Python module determines the appropriate
platform-specific directories, e.g. the ``user data dir''.")
(license license:expat)))
(define-public python-json2html
(package
(name "python-json2html")
(version "1.3.0")
(source
;; There are no tests in the PyPI tarball.
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/softvar/json2html")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1ncypljnl5y8lsxy6ibcqy412kx3mzxl4ajg67568hvq98kv1sb3"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? inputs outputs #:allow-other-keys)
(when tests?
(add-installed-pythonpath inputs outputs)
(invoke "python" "test/run_tests.py")))))))
(home-page "https://github.com/softvar/json2html")
(synopsis "Convert JSON to HTML table")
(description "@code{python-json2html} is a python module to convert JSON
into a human readable HTML table representation.")
(license license:expat)))
(define-public python-face
(package
(name "python-face")
(version "20.1.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "face" version))
(sha256
(base32 "0gpd9f0rmbv3rd2szi2na37l29fabkwazikjrxc6wca1lddwlnbx"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? inputs outputs #:allow-other-keys)
(when tests?
;; Make installed package available for running the tests.
(add-installed-pythonpath inputs outputs)
(invoke "pytest" "-v")))))))
(native-inputs
(list python-pytest))
(propagated-inputs
(list python-boltons))
(home-page "https://github.com/mahmoud/face")
(synopsis "CLI parsing and dispatching microframework")
(description "@code{python-face} is a Pythonic microframework for building
command-line applications.
@itemize
@item First-class subcommand support
@item Powerful middleware architecture
@item Separate parser layer
@item Built-in flagfile support
@item Handy testing utilities
@item Themeable help display
@end itemize")
(license license:bsd-3)))
(define-public python-glom
(package
(name "python-glom")
(version "20.11.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "glom" version))
(sha256
(base32 "04pba09vdr3qjvqvy14g60fscdsi35chbbyqpczdp76cpir101al"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? inputs outputs #:allow-other-keys)
(when tests?
;; Make installed executable available for running the tests.
(setenv "PATH"
(string-append (assoc-ref outputs "out") "/bin"
":" (getenv "PATH")))
(invoke "pytest" "-v")))))))
(native-inputs
(list python-pytest python-pyyaml))
(propagated-inputs
(list python-attrs python-boltons python-face))
(home-page "https://github.com/mahmoud/glom")
(synopsis "Declaratively restructure data")
(description "Real applications have real data, and real data
nests---objects inside of objects inside of lists of objects. glom is a new
and powerful way to handle real-world data, featuring:
@itemize
@item Path-based access to nested data structures
@item Readable, meaningful error messages
@item Declarative data transformation, using lightweight, Pythonic specifications
@item Built-in data exploration and debugging features
@end itemize")
(license license:bsd-3)))
(define-public python-box
(package
(name "python-box")
(version "7.1.1")
(source
;; The PyPI tarball does not contain all test files.
(origin
(method git-fetch)
(uri
(git-reference
(url "https://github.com/cdgriffith/Box")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"1v8s6wji17fh87nvamzysvxi8f51h6szh6h6dxvids56gg5zc553"))))
(build-system pyproject-build-system)
(propagated-inputs
(list python-msgpack python-ruamel.yaml python-tomli python-tomli-w))
(native-inputs
(list python-cython python-pytest python-wheel))
(home-page "https://github.com/cdgriffith/Box")
(synopsis "Advanced Python dictionaries with dot notation access")
(description
"This package provides the @code{python-box} Python module.
It implements advanced Python dictionaries with dot notation access.")
(license license:expat)))
(define-public python-fields
(package
(name "python-fields")
(version "5.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "fields" version))
(sha256
(base32 "09sppvhhkhkv9zc9g994m53z15v92csxwcf42ggkaknlv01smm1i"))))
(build-system python-build-system)
(home-page "https://python-fields.readthedocs.io/")
(synopsis "Python container class boilerplate killer")
(description "Avoid repetetive boilerplate code in Python classes.")
(license license:bsd-3)))
(define-public python-aspectlib
(package
(name "python-aspectlib")
(version "1.5.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "aspectlib" version))
(sha256
(base32 "1am4ycf292zbmgz791z393v63w7qrynf8q5p9db2wwf2qj1fqxfj"))))
(build-system python-build-system)
(propagated-inputs (list python-fields))
(home-page "https://github.com/ionelmc/python-aspectlib")
(synopsis
"Python monkey-patching and decorators")
(description
"This package provides an aspect-oriented programming, monkey-patch
and decorators library. It is useful when changing behavior in existing
code is desired. It includes tools for debugging and testing:
simple mock/record and a complete capture/replay framework.")
(license license:bsd-2)))
(define-public python-ijson
(package
(name "python-ijson")
(version "3.1.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ijson" version))
(sha256
(base32 "1sp463ywj4jv5cp6hsv2qwiima30d09xsabxb2dyq5b17jp0640x"))))
(arguments
`(#:phases
(modify-phases %standard-phases
;; the tests run by the default setup.py require yajl 1.x,
;; but we have 2.x. yajl 1.x support is going to be removed
;; anyway, so use pytest to avoid running the yajl1-related
;; tests. See: https://github.com/ICRAR/ijson/issues/55
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv")))))))
(inputs
;; yajl is optional, but compiling with it makes faster
;; backends available to ijson:
(list yajl))
(native-inputs
(list python-pytest))
(build-system python-build-system)
(home-page "https://github.com/ICRAR/ijson")
(synopsis "Iterative JSON parser with Python iterator interfaces")
(description
"Ijson is an iterative JSON parser with standard Python iterator
interfaces.")
(license license:bsd-3)))
(define-public python-ordered-set
(package
(name "python-ordered-set")
(version "4.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ordered-set" version))
(sha256
(base32 "1a34fg3r3480nfm6652kyqql3lwixf8jirzdja9camvnr128wjk9"))))
(build-system python-build-system)
(arguments
(list #:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv")))))))
(native-inputs (list python-cython python-pytest))
(home-page "https://github.com/simonpercivall/orderedset")
(synopsis "Ordered Set implementation in Cython")
(description "This library provides an @code{OrderedSet} data type that
works like a regular set, but remembers insertion order. It supports the full
Python @code{set} interface.")
(license license:asl2.0)))
(define-public python-orgparse
(package
(name "python-orgparse")
(version "0.3.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "orgparse" version))
(sha256
(base32 "14iv4pg3rma9560plg0w943x04mr2cmrssda43y2d1x9acrd2n71"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv" "orgparse/tests")))))))
(native-inputs
(list python-pytest python-setuptools-scm))
(home-page "https://github.com/karlicoss/orgparse")
(synopsis "Emacs Org mode parser in Python")
(description
"This package is a Python module for reading Emacs Org mode files.")
(license license:bsd-3)))
(define-public dynaconf
(package
(name "dynaconf")
(version "3.2.4")
(source
(origin
(method git-fetch)
(uri
(git-reference
(url "https://github.com/dynaconf/dynaconf")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"0fj2ffvzfvjf4d7f672h5x5fzq26f8hax9j3dfsix158fwm0212w"))
(patches (search-patches "dynaconf-unvendor-deps.patch"))
(modules '((guix build utils)))
(snippet '(begin
;; Remove vendored dependencies
(let ((unvendor '("click" "dotenv" "ruamel" "toml")))
(with-directory-excursion "dynaconf/vendor"
(for-each delete-file-recursively unvendor)))
;; Lower coverage quality gate for unit tests
(substitute* ".coveragerc"
(("fail_under = 95") "fail_under = 50"))))))
(build-system pyproject-build-system)
(arguments
`(#:test-flags
'("-k"
,(let ((click-tests '("test_negative_get"
"test_inspect_invalid_format")))
;; Disable integration tests
(string-append "not integration and not "
;; These tests fail because we use Click 8.* instead of
;; Click 7
(string-join click-tests " and not "))))
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch-for-click-8
(lambda _
(substitute* "dynaconf/cli.py"
(("click.get_os_args\\()") ;deprecated from Click 8.1+
"sys.argv[1:]"))))
(replace 'check
(lambda* (#:key tests? test-flags #:allow-other-keys)
(when tests?
;; These tests depend on hvac and a live Vault process.
(delete-file "tests/test_vault.py")
(apply invoke
`("py.test" ,@test-flags "-v"
"--cov-config" ".coveragerc"
"--cov=dynaconf"
"-l" "--tb=short"
"--maxfail=1" "tests/"))))))))
(propagated-inputs
(list python-click python-configobj python-dotenv-0.13.0
python-ruamel.yaml-0.16 python-toml python-tomli))
(native-inputs
(list python-django python-flask python-pytest python-pytest-cov
python-pytest-mock))
(home-page "https://www.dynaconf.com/")
(synopsis "The dynamic configurator for your Python project")
(description
"This package provides @code{dynaconf} the dynamic configurator manager for
your Python project. It provides features such as:
@itemize
@item Inspired by the @url{https://12factor.net/config, 12-factor application guide};
@item Settings management (default values, validation, parsing, templating);
@item Protection of sensitive information (passwords/tokens);
@item Multiple file formats @code{toml|yaml|json|ini|py} and also customizable
loaders;
@item Full support for environment variables to override existing settings
(dotenv support included);
@item Optional layered system for multiple environments @code{[default,
development, testing, production]};
@item Built-in support for Hashicorp Vault and Redis as settings and secrets storage;
@item Built-in extensions for Django and Flask web frameworks;
@item CLI for common operations such as @code{init, list, write, validate, export}.
@end itemize")
(license license:expat)))
(define-public python-pudb
(package
(name "python-pudb")
(version "2023.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "pudb" version))
(sha256
(base32
"00rgx80inpvsbcydp29mrhw44xizyqdqxvv6lqcak1xs79h3rpqm"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(add-before 'check 'fix-read-only-home
(lambda _
(setenv "HOME" "/tmp")))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "-vv")))))))
(native-inputs (list python-pytest python-pytest-mock python-numpy))
(propagated-inputs (list python-jedi python-pygments python-urwid
python-urwid-readline))
(home-page "https://documen.tician.de/pudb/")
(synopsis "Console-based Python debugger")
(description
"@command{pudb} is a full-screen, console-based Python debugger providing
all the niceties of modern GUI-based debuggers in a more lightweight and
keyboard-friendly package.")
(license license:expat)))
(define-public pudb
(deprecated-package "pudb" python-pudb))
(define-public python-iwlib
(package
(name "python-iwlib")
(version "1.7.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "iwlib" version))
(sha256
(base32 "18bd35wn7zclalpqbry42pf7bjrdggxkkw58mc0k1vkhg9czc1d8"))))
(build-system python-build-system)
(inputs
(list wireless-tools))
(propagated-inputs (list python-cffi))
(home-page "https://github.com/nhoad/python-iwlib")
(synopsis "Python module to interface with iwlib")
(description
"This package provides a Python interface to iw wireless tools.")
(license license:gpl2)))
(define-public python-pdoc3
(package
(name "python-pdoc3")
(version "0.10.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pdoc3" version))
(sha256
(base32 "1dz4hw10ngidzg9cjvflc8nlrwrjbb3ijhmaw4w6f039p6yff8jz"))
(patches
(search-patches "python-pdoc3-tests.patch"))))
(build-system python-build-system)
(native-inputs
(list python-setuptools-git python-setuptools-scm))
(propagated-inputs (list python-mako python-markdown))
(home-page "https://pdoc3.github.io/pdoc/")
(synopsis "Auto-generate API documentation for Python projects")
(description
"This package auto-generates API documentation from Python projects
already existing modules and objects docstrings.")
(license license:agpl3+)))
(define-public python-piexif
(package
(name "python-piexif")
(version "1.1.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "piexif" version ".zip"))
(sha256
(base32 "06sz58q4mrw472p8fbnq7wsj8zpi5js5r8phm2hiwfmz0v33bjw3"))
(patches
(search-patches "python-piexif-fix-tests-with-pillow-7.2.patch"))))
(build-system python-build-system)
(native-inputs
(list unzip python-pillow))
(home-page "https://github.com/hMatoba/Piexif")
(synopsis "Simplify exif manipulations with Python")
(description "Piexif simplifies interacting with EXIF data in
Python. It includes the tools necessary for extracting, creating,
manipulating, converting and writing EXIF data to JPEG, WebP and TIFF files.")
(license license:expat)))
(define-public python-pyrss2gen
(package
(name "python-pyrss2gen")
(version "1.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "PyRSS2Gen" version))
(sha256
(base32 "1rvf5jw9hknqz02rp1vg8abgb1lpa0bc65l7ylmlillqx7bswq3r"))))
(build-system python-build-system)
(home-page "http://dalkescientific.com/Python/PyRSS2Gen.html")
(synopsis "Generate RSS 2.0 feeds using a Python data structure")
(description "PyRSS2Gen is the interface to generate RSS 2.0 feeds.
PyRSS2Gen builds the feed up by using a XML generator.")
(license license:bsd-3)))
(define-public python-yapsy
(package
(name "python-yapsy")
(version "1.12.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Yapsy" version))
(sha256
(base32 "12rznbnswfw0w7qfbvmmffr9r317gl1rqg36nijwzsklkjgks4fq"))))
(build-system python-build-system)
(home-page "https://yapsy.sourceforge.net")
(synopsis "Simple plugin system for Python applications")
(description "Yapsy, or Yet Another Plugin SYstem, is a small library
implementing the core mechanisms needed to build a plugin system into a wider
application.
The main purpose is to depend only on Python's standard libraries and to
implement only the basic functionalities needed to detect, load and keep track
of several plugins.")
(license license:bsd-3)))
(define-public python-doit
(package
(name "python-doit")
(version "0.36.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "doit" version))
(sha256
(base32 "1g1lwaxb9q3a6c24sr3gw5bspsk5frbrk2frb7z25jqljp67rl3i"))))
(build-system pyproject-build-system)
;; This is not a serious test failure. It's probably due to the load path
;; at test time.
(arguments (list #:test-flags '(list "-k" "not test_execute")))
(propagated-inputs
(list python-cloudpickle python-importlib-metadata))
(native-inputs (list python-pytest))
(home-page "https://pydoit.org")
(synopsis "Automation tool to execute any kind of task in a build-tools
fashion")
(description "doit is an automation tool that brings the power of
build-tools to execute any kind of task.
A task describes some computation to be done (actions), and contains some
extra meta-data. The actions can be external programs or Python functions. A
single task may define more than one action. doit uses the task’s meta-data
to:
@itemize
@item cache task results
@item correct execution order
@item parallel execution
@item powerful dependency system
@end itemize")
(license license:expat)))
(define-public python-phpserialize
(package
(name "python-phpserialize")
(version "1.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "phpserialize" version))
(sha256
(base32 "19qgkb9z4zjbjxlpwh2w6pxkz2j3iymnydi69jl0jg905lqjsrxz"))))
(build-system python-build-system)
(arguments
(list
;; tests missing in pypi archive, anhow they are quite simple and not worth any hassle
#:tests? #f))
(home-page "http://github.com/mitsuhiko/phpserialize")
(synopsis "Python port of the serialize and unserialize functions of PHP")
(description
"This package provides a port of the serialize and unserialize functions of PHP for Python")
(license license:bsd-3)))
(define-public python-pydevtool
(package
(name "python-pydevtool")
(version "0.3.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pydevtool" version))
(sha256
(base32 "12pwhvvm4pgvfxj18ylb66drxm28b2cpb5rbxqrsrk1k7m7vmqr5"))))
(build-system pyproject-build-system)
(arguments (list #:tests? #false)) ;no tests
(propagated-inputs (list python-doit python-rich-click))
(home-page "https://github.com/pydoit/pydevtool")
(synopsis "CLI dev tools powered by pydoit")
(description "This package provides command line tools, powered by pydoit.
It offers integration with @code{click} and @code{rich} for custom CLI and
these linters: @code{pycodestlye}, @code{pyflakes}")
(license license:expat)))
(define-public nikola
(package
(name "nikola")
(version "8.2.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "Nikola" version))
(sha256
(base32 "1h96y4sfypp2fbqxa8xrqch5f7r3srm2ly222k9w2n143h2spx4m"))))
(build-system python-build-system)
(propagated-inputs
(list python-babel
python-blinker
python-dateutil
python-docutils
python-doit
python-jinja2 ;; for themes
python-lxml
python-mako
python-markdown
python-natsort
python-notebook ;; for ipynb
python-phpserialize ;; for wordpress import
python-piexif
python-pillow
python-pygments
python-pyrss2gen
python-requests
python-ruamel.yaml ;; for YAML metadata
python-toml
python-unidecode
python-yapsy))
(native-inputs
(list python-coverage
python-flake8
python-freezegun
python-pytest
python-pytest-cov))
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest" "tests" "--no-cov"
"-k" "not test_compiling_markdown[hilite]")))))))
(home-page "https://getnikola.com/")
(synopsis "Modular, fast and simple static website and blog generator")
(description "Nikola generates static websites and blogs. Out of the box,
it supports reStructuredText, Markdown, IPython (Jupyter) Notebooks and HTML,
and has plugins for many other formats.")
(license license:expat)))
(define-public nbss-upload
(package
(name "nbss-upload")
(version "0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "nbss-upload" version))
(sha256
(base32 "0jhyfm7w2ssknmh9789fmpnf79xr7sxbdcjwak6hfha6qparvk38"))))
(build-system python-build-system)
(propagated-inputs
(list python-requests))
(arguments
`(#:tests? #f)) ;no tests
(home-page "https://github.com/notebook-sharing-space/nbss-upload")
(synopsis "Upload notebooks to a notebooksharing.space instance")
(description
"Upload notebooks as @code{.ipynb}, @code{.rmd}, and @code{.html} to a
notebooksharing.space instance.")
(license license:bsd-3)))
(define-public python-reedsolo
(package
(name "python-reedsolo")
(version "1.5.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "reedsolo" version))
(sha256
(base32 "09q15ji9iac3nmmxrcdvz8ynldvvqanqy3hs6q3cp327hgf5rcmq"))))
(build-system python-build-system)
(home-page "https://github.com/tomerfiliba/reedsolomon")
(synopsis "Pure-Python Reed Solomon encoder/decoder")
(description "A pure-python universal errors-and-erasures Reed-Solomon
Codec, based on the tutorial at Wikiversity. This is a burst-type
implementation, so that it supports any Galois field higher than 2^3,
but not binary streams.")
(license license:public-domain)))
(define-public python-esprima
(package
(name "python-esprima")
(version "4.0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "esprima" version))
(sha256
(base32 "1vi32g991lxcxzmncfiszh8m9bwkh4887szskkdi0a9wdn3imnq8"))))
(build-system python-build-system)
(home-page "https://github.com/Kronuz/esprima-python")
(synopsis
"ECMAScript parsing infrastructure for analysis in Python")
(description
"This package provides ECMAScript parsing infrastructure for
multipurpose analysis in Python.")
(license license:bsd-3)))
(define-public python-types-dataclasses
(package
(name "python-types-dataclasses")
(version "0.6.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "types-dataclasses" version))
(sha256
(base32
"1mq6qd365m8ml889zl5dxj9kncjv71iq1d1fvgj59y0ixlpm6s35"))))
(build-system python-build-system)
(home-page "https://github.com/python/typeshed")
(synopsis "Typing stubs for dataclasses")
(description
"This package provides a collection of library stubs for Python, with
static types.")
(license license:asl2.0)))
(define-public python-types-docutils
(package
(name "python-types-docutils")
(version "0.18.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "types-docutils" version))
(sha256
(base32 "14ypv0x6fk1pjw0bvvr1lkb2g6dvq2pwvbd5b5pzjl6182fhmaim"))))
(build-system python-build-system)
(home-page "https://github.com/python/typeshed")
(synopsis "Typing stubs for docutils")
(description "This package provides a collection of library stubs for
Python, with static types.")
(license license:asl2.0)))
(define-public python-types-requests
(package
(name "python-types-requests")
(version "2.30.0.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "types-requests" version))
(sha256
(base32
"0cas3cjkhrvsz2rmqnhqiihy9j79wxi9xbih8jk0p9r48c2q3iyy"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-types-urllib3))
(home-page "https://github.com/python/typeshed")
(synopsis "Typing stubs for requests")
(description "This package provides typing stubs for requests.")
(license license:asl2.0)))
(define-public python-types-setuptools
(package
(name "python-types-setuptools")
(version "67.6.0.5")
(source (origin
(method url-fetch)
(uri (pypi-uri "types-setuptools" version))
(sha256
(base32
"0qlrxgl4mz6hs8z4qnl91hsa8mqcfm6397s3s3j21imxqxk8ww1s"))))
(build-system python-build-system)
(home-page "https://github.com/python/typeshed")
(synopsis "Typing stubs for setuptools")
(description "This package provides typing stubs for setuptools.")
(license license:asl2.0)))
(define-public python-types-urllib3
(package
(name "python-types-urllib3")
(version "1.26.25.12")
(source (origin
(method url-fetch)
(uri (pypi-uri "types-urllib3" version))
(sha256
(base32
"0zcipjdnbnc8ymk8mh9n5mypa0qr03rqj98lbmahldcdrrap6md1"))))
(build-system pyproject-build-system)
(home-page "https://github.com/python/typeshed")
(synopsis "Typing stubs for urllib3")
(description "This package provides typing stubs for urllib3.")
(license license:asl2.0)))
(define-public python-typeshed-client
(package
(name "python-typeshed-client")
(version "2.3.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "typeshed_client" version))
(sha256
(base32
"1vdwp1jjg27b22qxgm49v21nb8vm1iki3bfsm0fnq2rsz5alfwz2"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-importlib-resources))
(home-page "https://github.com/JelleZijlstra/typeshed_client")
(synopsis "Library for accessing stubs in typeshed")
(description
"This package provides a library for accessing stubs in typeshed.")
(license license:expat)))
(define-public python-psycopg2-binary
(package
(name "python-psycopg2-binary")
(version "2.9.3")
(source (origin
(method url-fetch)
(uri (pypi-uri "psycopg2-binary" version))
(sha256
(base32
"0kpaxg3lg5wg5ww5kxmzi2z2d7arsx13ci915d8a2pf17lqza7bn"))))
(build-system python-build-system)
(inputs (list postgresql))
(arguments
;; Tests are disable because they need a live instance of PostgreSQL.
'(#:tests? #f))
(home-page "https://psycopg.org/")
(synopsis "PostgreSQL database adapter for Python")
(description
"Psycopg is a PostgreSQL database adapter for the Python programming
language. Its main features are the complete implementation of the Python DB
API 2.0 specification and the thread safety (several threads can share the
same connection). It was designed for heavily multi-threaded applications
that create and destroy lots of cursors and make a large number of concurrent
@code{INSERT}s or @code{UPDATE}s.
Psycopg 2 is mostly implemented in C as a libpq wrapper, resulting in
being both efficient and secure. It features client-side and
server-side cursors, asynchronous communication and notifications,
@code{COPY TO}/@code{COPY FROM} support. Many Python types are supported
out-of-the-box and adapted to matching PostgreSQL data types;
adaptation can be extended and customized thanks to a flexible objects
adaptation system.
Psycopg 2 is both Unicode and Python 3 friendly.")
(license license:lgpl3+)))
(define-public python-pyfuse3
(package
(name "python-pyfuse3")
(version "3.3.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pyfuse3" version))
(sha256
(base32 "1gbkwmk7gpyy70cqj9226qvwrx13xlwxfz86l86n5ybr4i0zwc9b"))))
(build-system python-build-system)
(native-inputs (list pkg-config))
(inputs (list fuse))
(propagated-inputs (list python-pytest-trio))
(home-page "https://github.com/libfuse/pyfuse3")
(synopsis "Python bindings to FUSE 3")
(description "This package provides Python 3 bindings for libfuse 3 with
async I/O support.")
(license license:gpl2+)))
(define-public python-ansicolors
(package
(name "python-ansicolors")
(version "1.1.8")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ansicolors" version ".zip"))
(sha256
(base32 "1q3jqglkq4z0f6nkkn8bswcwqg012i2grrc27kabr8286dg4zycr"))))
(build-system python-build-system)
(native-inputs
(list python-tox
python-pytest-cov
unzip))
(home-page "https://github.com/jonathaneunice/colors/")
(synopsis "ANSI colors for Python")
(description
"This package adds ANSI colors and decorations to your strings.")
(license license:isc)))
(define-public python-types-freezegun
(package
(name "python-types-freezegun")
(version "1.1.8")
(source
(origin
(method url-fetch)
(uri (pypi-uri "types-freezegun" version))
(sha256
(base32 "08g926s8343zwq140zcfwly3qfgmahm7lp0vgb3ics549b2hifzl"))))
(build-system python-build-system)
(home-page "https://github.com/python/typeshed")
(synopsis "Typing stubs for @code{freezegun}")
(description "This package contains typing stubs for for @code{freezegun}, a
very small subset the Python stubs contained in the complete @code{typeshed}
collection.")
(license license:asl2.0)))
(define-public python-types-protobuf
(package
(name "python-types-protobuf")
(version "3.20.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "types-protobuf" version))
(sha256
(base32
"000f8n6d4ilihiaf590k73rx3327jh8ima5q5dpxlwz3frj45qrn"))))
(build-system python-build-system)
(home-page "https://github.com/python/typeshed")
(synopsis "Typing stubs for @code{protobuf}")
(description "This package contains typing stubs for @code{protobuf}, a
very small subset the Python stubs contained in the complete @code{typeshed}
collection.")
(license license:asl2.0)))
(define-public python-types-pytz
(package
(name "python-types-pytz")
(version "2023.3.1.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "types-pytz" version))
(sha256
(base32 "16mbinqac2fjjh4gqw2940q8ysjqwj0hrvj4p9mqz76l5hcx08yc"))))
(build-system python-build-system)
(home-page "https://github.com/python/typeshed")
(synopsis "Typing stubs for pytz")
(description "This package contains typing stubs for @code{pytz}, a very
small subset the Python stubs contained in the complete @code{typeshed}
collection.")
(license license:asl2.0)))
(define-public python-types-toml
(package
(name "python-types-toml")
(version "0.10.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "types-toml" version))
(sha256
(base32 "10400bd3yv6rjfnq8galskkbpqz1sfx9sfgr5qwvw04270x4cjgr"))))
(build-system python-build-system)
(home-page "https://github.com/python/typeshed")
(synopsis "Typing stubs for TOML")
(description "This package contains typing stubs for TOML, a very small
subset the Python stubs contained in the complete @code{typeshed}
collection.")
(license license:asl2.0)))
(define-public python-types-ujson
(package
(name "python-types-ujson")
(version "4.2.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "types-ujson" version))
(sha256
(base32
"0k9n9hsq4k2zaakdwbkcsvi7m8d3mv2y9yl6f171y58ld4qpcxcy"))))
(build-system python-build-system)
(home-page "https://github.com/python/typeshed")
(synopsis "Typing stubs for ujson")
(description
"This is a PEP 561 type stub package for the ujson package. It can be
used by type-checking tools like mypy, PyCharm, pytype etc. to check code that
uses ujson.")
(license license:asl2.0)))
(define-public python-stltools
(package
(name "python-stltools")
(version "2022.01.20")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/rsmith-nl/stltools")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"1k6dhszza4lpy46qffaqx5zr70ikfqqysbacy7zabnrvz09fd4rs"))))
(build-system python-build-system)
(arguments
`(#:use-setuptools? #f
#:phases
(modify-phases %standard-phases
(delete 'build)
(replace 'install
(lambda* (#:key inputs outputs #:allow-other-keys)
(let ((moddir (string-append (site-packages inputs outputs) "/stltools"))
(bindir (string-append (assoc-ref outputs "out") "/bin")))
(copy-recursively "stltools" moddir)
(mkdir-p bindir)
(for-each
(lambda (script)
(let ((source (string-append script ".py"))
(target (string-append bindir "/" script)))
(copy-file source target)
(chmod target #o555)))
'("stl2pov" "stl2ps" "stl2pdf" "stlinfo")))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "py.test" "-v")))))))
(propagated-inputs (list python-pycairo))
(native-inputs (list python-pytest))
(home-page "https://github.com/rsmith-nl/stltools")
(synopsis "Python modules and scripts for handling STL files")
(description "This package consists of Python modules and scripts for
manipulating stereolithography (STL) files. It can convert STL files into
POV-ray meshes, PDF and PostScript. The Python modules allow for reading and
writing STL files. It supports both the text and binary forms of STL.")
(license license:expat)))
(define-public python-multipart
(package
(name "python-multipart")
(version "0.0.5")
(source (origin
(method url-fetch)
(uri (pypi-uri "python-multipart" version))
(sha256
(base32
"0hzshd665rl1bkwvaj9va4j3gs8nmb478fbvligx20663xhmzfzp"))))
(build-system python-build-system)
(propagated-inputs (list python-six))
(native-inputs (list python-pyyaml python-mock python-pytest-cov))
(arguments
`(#:phases (modify-phases %standard-phases
;; There is a bug in the test_suit specification.
(add-after 'unpack 'patch-test-suite
(lambda _
;; Make compatible with PyYAML 6.
(substitute* "multipart/tests/test_multipart.py"
(("yaml.load")
"yaml.safe_load"))
(substitute* "setup.py"
(("test_suite = 'multipart.tests.suite'")
"test_suite = 'multipart.tests.test_multipart.suite'"))
;; Needed by PyYAML 6.0.
(substitute* "multipart/tests/test_multipart.py"
(("yaml_data = yaml.load\\(f\\)")
"yaml_data = yaml.load(f, Loader=yaml.SafeLoader)")))))))
(home-page "https://github.com/andrew-d/python-multipart")
(synopsis "Streaming multipart parser for Python")
(description
"This package provides a streaming multipart parser for Python.")
(license license:asl2.0)))
(define-public python-aiopg
(package
(name "python-aiopg")
(version "1.3.3")
(source (origin
(method url-fetch)
(uri (pypi-uri "aiopg" version))
(sha256
(base32
"1mwmypsfzh8adjbyvf7kqv9h3k1kf5ykhi1g3ahw4wqdxaj6nz2l"))))
(build-system python-build-system)
(native-inputs (list python-sqlalchemy))
(propagated-inputs (list python-async-timeout python-psycopg2-binary))
(home-page "https://aiopg.readthedocs.io")
(synopsis "Postgres integration with asyncio")
(description
"aiopg is a library for accessing a PostgreSQL
database from the asyncio (PEP-3156/tulip) framework. It wraps
asynchronous features of the Psycopg database driver.")
(license license:bsd-3)))
(define-public python-verspec
(package
(name "python-verspec")
(version "0.1.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "verspec" version))
(sha256
(base32
"07n06wv85fm4vl1ird2mja0823js3x322wgs9gdnq1djjyk4ql64"))))
(build-system python-build-system)
(native-inputs (list python-coverage python-flake8 python-mypy
python-pretend python-pytest))
(arguments
`(#:phases (modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? inputs outputs #:allow-other-keys)
(when tests?
(add-installed-pythonpath inputs outputs)
(invoke "touch" "test/__init__.py")
(invoke "pytest")))))))
(home-page "https://github.com/jimporter/verspec")
(synopsis "Flexible version handling for Python")
(description
"This Python library handles software versions and specifiers. It is
adapted from the @code{packaging} package.")
(license (list license:bsd-2 license:asl2.0))))
(define-public python-shtab
(package
(name "python-shtab")
(version "1.7.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "shtab" version))
(sha256
(base32 "0g14778c5zgiq6b92k40n9irp75c5vcsvl5541cw8bmqxq1cnjsf"))))
(build-system pyproject-build-system)
(native-inputs
(list bash
python-pytest
python-pytest-cov
python-pytest-timeout
python-setuptools-scm
python-wheel))
(home-page "https://github.com/iterative/shtab")
(synopsis "Automagic shell tab completion for Python CLI applications")
(description
"This package automatically generates shell tab completion scripts for
Python CLI apps.")
(license license:asl2.0)))
(define-public python-style
(package
(name "python-style")
(version "1.1.6")
(source
(origin
(method url-fetch)
(uri (pypi-uri "style" version))
(sha256
(base32 "1dcfb578v9mrwh92rgms87gql0gp4vgj6l9hpgyfg0wbd3rh3bfh"))))
(build-system python-build-system)
(home-page "https://github.com/lmittmann/style")
(synopsis "Terminal string styling")
(description
"@code{python-style} is a simple terminal string styling package. Its API is
a port of the chalk package for javascript.")
(license license:expat)))
(define-public python-sre-yield
(package
(name "python-sre-yield")
(version "1.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "sre_yield" version))
(sha256
(base32
"12kv3mvdr22g2v9wfr5aabh1f58s817dbh8mrlfzxzxs7hm1lkz9"))))
(build-system python-build-system)
(native-inputs (list python-nose))
(home-page "https://github.com/google/sre_yield")
(synopsis "Expands a regular expression to its possible matches")
(description
"The goal of sre_yield is to efficiently generate all values that can
match a given regular expression, or count possible matches efficiently. It
uses the parsed regular expression, so you get a much more accurate result
than trying to just split strings.")
(license license:asl2.0)))
(define-public python-srsly
(package
(name "python-srsly")
(version "2.4.8")
(source (origin
(method url-fetch)
(uri (pypi-uri "srsly" version))
(sha256
(base32
"14ca3gwmhr24axxdhn73157wzzjkmi1s1ka91dz49hh9a2k9akdj"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-before 'check 'build-extensions
(lambda _
;; Cython extensions have to be built before running the tests.
(invoke "python" "setup.py" "build_ext" "--inplace"))))))
(propagated-inputs (list python-catalogue))
(native-inputs
(list python-cython
python-pytest
python-pytest-timeout
python-mock
python-numpy
python-psutil))
(home-page "https://github.com/explosion/srsly")
(synopsis "Serialization utilities for Python")
(description "This package bundles some of the best Python serialization
libraries into one standalone package, with a high-level API that makes it
easy to write code that's correct across platforms and Pythons.")
(license license:expat)))
(define-public python-pyperf
(package
(name "python-pyperf")
(version "2.3.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pyperf" version))
(sha256
(base32 "189qf9wdbig0fk4n3bavx8acgdbay5lllfvw48jvbfaafb7y5hja"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'fix-tests
(lambda _
;; Some of these tests fail with:
;;
;; ModuleNotFoundError: No module named 'pyperf'
;;
;; even when calling ‘add-installed-pythonpath’ in the ‘check’
;; phase.
(delete-file "pyperf/tests/test_examples.py")))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
;; From tox.ini's ‘testenv.commands’.
(invoke "python" "-bb" "-Wd"
"-m" "unittest" "discover"
"-s" "pyperf/tests/" "-v")))))))
(native-inputs
(list python-psutil))
(home-page "https://github.com/psf/pyperf")
(synopsis "Toolkit for running Python benchmarks")
(description "The Python @code{pyperf} module is a toolkit for writing,
running and analyzing benchmarks. It features a simple API that can:
@itemize
@item automatically calibrate a benchmark for a time budget;
@item spawn multiple worker processes;
@item compute the mean and standard deviation;
@item detect if a benchmark result seems unstable;
@item store benchmark results in JSON format;
@item support multiple units: seconds, bytes and integer.
@end itemize")
(license license:expat)))
(define-public python-pydispatcher
(package
(name "python-pydispatcher")
(version "2.0.5")
(source
(origin
(method url-fetch)
(uri (pypi-uri "PyDispatcher" version))
(sha256
(base32 "1bswbmhlbqdxlgbxlb6xrlm4k253sg8nvpl1whgsys8p3fg0cw2m"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest")))))))
(native-inputs (list python-pytest))
(home-page "https://pydispatcher.sourceforge.net")
(synopsis "Multi-producer-multi-consumer signal dispatching mechanism")
(description "PyDispatcher is an enhanced version of Patrick K. O’Brien’s
original @code{dispatcher.py} module. It provides the Python programmer with
a robust mechanism for event routing within various application contexts.
Included in the package are the robustapply and saferef modules, which
provide the ability to selectively apply arguments to callable objects
and to reference instance methods using weak-references.")
(license license:bsd-3)))
(define-public python-pyee
(package
(name "python-pyee")
(version "9.0.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pyee" version))
(sha256
(base32 "0cjbxbqr9f8bn2h3ra69d550qj2r1hmsgrh5nx31ywmwia9c8w17"))))
(build-system python-build-system)
(propagated-inputs (list python-typing-extensions))
(native-inputs (list python-twisted python-trio))
(home-page "https://github.com/jfhbrook/pyee")
(synopsis "Emit events with Python")
(description
"This package provides a port of node.js's EventEmitter to python.
Additionally, it includes a number of subclasses useful for implementing async
and threaded programming in python, such as async/await.")
(license license:expat)))
(define-public python-queuelib
(package
(name "python-queuelib")
(version "1.6.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "queuelib" version))
(sha256
(base32 "1lpwq8wx3025i14y5h0hbald2ypbarf081pql6cqcak4y9kp482b"))))
(build-system python-build-system)
(native-inputs (list python-pytest))
(home-page "https://github.com/scrapy/queuelib")
(synopsis
"Collection of persistent (disk-based) and non-persistent (memory-based) queues")
(description "Queuelib is a Python library that implements object
collections which are stored in memory or persisted to disk, provide a
simple API, and run fast.
Queuelib provides collections for queues (FIFO), stacks (LIFO), queues
sorted by priority and queues that are emptied in a round-robin
fashion.")
(license license:bsd-3)))
(define-public python-posix-ipc
(package
(name "python-posix-ipc")
(version "1.0.5")
(source
(origin
;; The source distributed on PyPI is prebuild.
(method git-fetch)
(uri (git-reference
(url "https://github.com/osvenskan/posix_ipc")
(commit (string-append "rel" version))))
(file-name (git-file-name name version))
(sha256
(base32 "17y4d0pmvp199c5hbs602ailhlh9f9zv89kmpbd8jhyl6rgaxsvs"))))
(build-system python-build-system)
(arguments
(list #:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'patch-cc-path
(lambda _
(substitute* "prober.py"
(("cmd = .cc")
(string-append "cmd = \"" #$(cc-for-target)))))))))
(home-page "https://semanchuk.com/philip/posix_ipc/")
(synopsis "POSIX IPC primitives for Python")
(description
"This package provides POSIX IPC primitives - semaphores, shared memory and
message queues for Python.")
(license license:bsd-3))) ; BSD like Copyright (c) 2018, Philip Semanchuk
(define-public python-itemadapter
(package
(name "python-itemadapter")
(version "0.8.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "itemadapter" version))
(sha256
(base32 "1aa898gjgwy3axxfrgsh4kdvhp6n6wz3ccdishq0gh8azf2q8xbp"))))
(build-system python-build-system)
(home-page "https://github.com/scrapy/itemadapter")
(synopsis "Common interface for data container classes")
(description "The ItemAdapter class is a wrapper for data container
objects, providing a common interface to handle objects of different
types in an uniform manner, regardless of their underlying implementation.
Currently supported types are:
@itemize
@item scrapy.item.Item
@item dict
@item dataclass-based classes
@item attrs-based classes
@item pydantic-based classes
@end itemize
Additionally, interaction with arbitrary types is supported by
implementing a pre-defined interface.")
(license license:bsd-3)))
(define-public python-itemloaders
(package
(name "python-itemloaders")
(version "1.1.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "itemloaders" version))
(sha256
(base32 "0j2aw4ipalj208594x80blpgkh1i63gqqa4nb67b823av9hirn11"))))
(build-system pyproject-build-system)
(native-inputs (list python-pytest))
(propagated-inputs
(list python-itemadapter python-jmespath python-parsel python-w3lib))
(home-page "https://github.com/scrapy/itemloaders")
(synopsis "Base library for scrapy's ItemLoader")
(description "Itemloaders is a library that helps you collect data
from HTML and XML sources. It comes in handy to extract data from web
pages, as it supports data extraction using CSS and XPath Selectors.
It’s specially useful when you need to standardize the data from many
sources. For example, it allows you to have all your casting and
parsing rules in a single place.")
(license license:bsd-3)))
(define-public python-iterable-io
(package
(name "python-iterable-io")
(version "1.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "iterable-io" version))
(sha256
(base32 "0g4cn522n4dv6ly8pwf97dc62rr4f7my38v0bh6vmac7jmrip7pv"))))
(build-system pyproject-build-system)
(home-page "https://github.com/pR0Ps/iterable-io")
(synopsis "Adapt generators and other iterables to a file-like interface")
(description
"@code{iterable-io} is a small Python library that provides an adapter so
that it's possible to read from
@url{https://docs.python.org/3/glossary.html#term-iterable,iterable} objects
in the same way as
@url{https://docs.python.org/3/glossary.html#term-file-object,file-like}
objects.")
(license license:lgpl3)))
(define-public python-iteround
(package
(name "python-iteround")
(version "1.0.4")
;; PyPI only has wheels.
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/cgdeboer/iteround")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1irw4sqrsgpc0ibxdv1hlx0d0jr1fqs48bj6mpfylzqkag9ywlfj"))))
(build-system pyproject-build-system)
(native-inputs
(list python-pytest))
(home-page "https://github.com/cgdeboer/iteround")
(synopsis "Sum-safe rounding for Iterables")
(description "Iteround is a standard library sum-safe rounding library for
Python iterables (lists, tuples, dicts).")
(license license:expat)))
(define-public python-hypy-utils
(package
(name "python-hypy-utils")
(version "1.0.6")
(source (origin
(method url-fetch)
(uri (pypi-uri "hypy_utils" version))
(sha256
(base32
"05csk0x8ivavq88x457cq5hwjcdirfbkzj7bbg5qgnpnf2dxxhiw"))))
(build-system python-build-system)
(home-page "https://github.com/hykilpikonna/HyPyUtils")
(synopsis "Python utility functions for HyDEV")
(description "This module provides Python utility functions for modifying
and setting the color of terminal output, via HyDEV.")
(license license:expat)))
(define-public python-mike
(package
(name "python-mike")
(version "1.1.2")
(source (origin
(method url-fetch)
(uri (pypi-uri "mike" version))
(sha256
(base32
"0yxp816x7s948xsd0fifvq9shg01xdxlifd9rzf5y2rd9iwz3hsn"))))
(build-system python-build-system)
(native-inputs
(list python-coverage python-flake8 python-shtab))
(propagated-inputs
(list python-jinja2 python-mkdocs python-pyyaml python-verspec))
(home-page "https://github.com/jimporter/mike")
(synopsis "Manage multiple versions of MkDocs-powered documentation")
(description
"This package provides a Python utility to easily deploy multiple
versions of MkDocs-powered docs to a Git branch. It is suitable for deploying
to Github via gh-pages.")
(license license:bsd-3)))
(define-public python-arpeggio
(package
(name "python-arpeggio")
(version "2.0.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "Arpeggio" version))
(sha256
(base32
"0ggdsck1wpladd5bh9drhkmm86bblgk2wagrhn3sdf4v04wkic6n"))))
(build-system python-build-system)
(native-inputs (list python-coverage
python-coveralls
python-flake8
python-mike
python-mkdocs
python-pytest
python-pytest-runner
python-twine
python-wheel))
(home-page "https://github.com/textX/Arpeggio")
(synopsis "Packrat parser interpreter for Python")
(description
"This Python library provides a recursive descent parser with backtracking
and memoization (a.k.a. packrat parser). Arpeggio grammars are based on PEG
formalism. Arpeggio's main use is a foundation for a toolchain for DSL
development but it can be used for all sorts of general purpose parsing.")
(license license:expat)))
(define-public python-flatten-json
(package
(name "python-flatten-json")
(version "0.1.13")
(source
(origin
(method url-fetch)
(uri (pypi-uri "flatten_json" version))
(sha256
(base32 "007m28gfs7pmz2rqqjxpial6skzw26hrfi8vrdy9agi9x0rj6dgf"))))
(build-system python-build-system)
(propagated-inputs (list python-six))
(home-page "https://github.com/amirziai/flatten")
(synopsis "Flatten JSON objects")
(description
"The @code{flatten_json} Python library flattens the hierarchy in your
object, which can be useful if you want to force your objects into a table.")
(license license:expat)))
(define-public python-deepdiff
(package
(name "python-deepdiff")
(version "6.3.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "deepdiff" version))
(sha256
(base32
"0i5nnb3nppi2vgbhiakpxiagyhx7l1f50hzcl8fcgica4bkz2fva"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-ordered-set))
(native-inputs
(list python-click
python-dateutil
python-jsonpickle
python-mock
python-numpy
python-pytest
python-pyyaml))
(home-page "https://github.com/seperman/deepdiff")
(synopsis "Deep difference and search of any Python object/data")
(description
"This package provides tools for computing deep differences and searching
of any Python object/data. Recreate objects by adding adding deltas to each
other.")
(license license:expat)))
(define-public python-deepmerge
(package
(name "python-deepmerge")
(version "1.0.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "deepmerge" version))
(sha256
(base32 "06hagzg8ccmjzqvszdxb52jgx5il8a1jdz41n4dpkyyjsfg7fi2b"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-before 'build 'set-version
(lambda _
(setenv "SETUPTOOLS_SCM_PRETEND_VERSION" #$version))))))
(native-inputs
(list python-setuptools-scm
python-pytest))
(home-page "https://deepmerge.readthedocs.io/en/latest/")
(synopsis "Merge nested data structures")
(description
"The @code{deep-merge} Python library provides a toolset to deeply merge
nested data structures in Python like lists and dictionaries.")
(license license:expat)))
(define-public python-murmurhash3
(package
(name "python-murmurhash3")
(version "2.3.5")
(source (origin
(method url-fetch)
(uri (pypi-uri "murmurhash3" version))
(sha256
(base32
"1gdzys1212dx70byz07ipknbw1awbqskh6aznlkm85js8b8qfczm"))))
(build-system python-build-system)
(native-inputs (list python-cython python-pytest))
(inputs (list python))
(arguments
(list #:modules
'((ice-9 ftw) (ice-9 match)
(guix build utils)
(guix build python-build-system))
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'set-source-file-times-to-1980
(lambda _
(let ((circa-1980 (* 10 366 24 60 60)))
(ftw "."
(lambda (file stat flag)
(utime file circa-1980 circa-1980) #t))))))))
(home-page "https://github.com/veegee/mmh3")
(synopsis "Python wrapper for MurmurHash (MurmurHash3)")
(description
"@code{murmurhash3} is a Python library for MurmurHash (MurmurHash3), a set
of fast and robust hash functions. This library is a Python extension module
written in C.")
(license license:public-domain)))
(define-public python-murmurhash
(package
(name "python-murmurhash")
(version "1.0.7")
(source (origin
(method url-fetch)
(uri (pypi-uri "murmurhash" version))
(sha256
(base32
"0vwkn98c703nvsigl2nz99rax2pafkx3djjfkgc49jiipmp3j2k3"))))
(build-system python-build-system)
(native-inputs (list python-cython python-pytest))
(inputs (list python python-murmurhash3))
(arguments
(list #:modules
'((ice-9 ftw) (ice-9 match)
(guix build utils)
(guix build python-build-system))
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'set-source-file-times-to-1980
(lambda _
(let ((circa-1980 (* 10 366 24 60 60)))
(ftw "."
(lambda (file stat flag)
(utime file circa-1980 circa-1980) #t))))))))
(home-page "https://github.com/explosion/murmurhash")
(synopsis "Cython bindings for MurmurHash2")
(description "This package provides Cython bindings for MurmurHash2.")
(license license:expat)))
;; Scooby requires for its test suite a ‘pyvips’ package that is missing its
;; VIPS dependency.
(define python-pyvips-for-python-scooby
(package
(inherit python-pyvips)
(name "python-pyvips-for-python-scooby")
(arguments
(substitute-keyword-arguments (package-arguments python-pyvips)
((#:phases phases)
#~(modify-phases #$phases
(delete 'fix-paths)
;; The checks won't succeed without VIPS.
(delete 'check)
(delete 'sanity-check)))))
(inputs
(modify-inputs (package-inputs python-pyvips)
(delete "vips")))
(synopsis "pyvips for Scooby's test suite")))
(define-public python-scooby
(package
(name "python-scooby")
(version "0.5.12")
(source
;; The PyPI tarball does not contain the tests.
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/banesullivan/scooby")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "1gkpmz8wl3jg8ylf1na35308sznw2g9wx33zqlyq5i2gpy2ml9mw"))))
(build-system python-build-system)
(native-inputs
(list python-beautifulsoup4
python-numpy
python-pytest
python-pytest-cov
python-pyvips-for-python-scooby
python-scipy))
(propagated-inputs
(list python-psutil))
(arguments
'(#:phases
(modify-phases %standard-phases
(add-after 'unpack 'fix-tests
(lambda _
(substitute* "tests/test_scooby.py"
;; The test suite uses the no-version PyPI package
;; (https://pypi.org/project/no-version/),
;; but it doesn't seem worth packaging in Guix just for this.
(("scooby\\.report\\.VERSION_NOT_FOUND")
"scooby.report.MODULE_NOT_FOUND")
(("^ +import no_version # noqa.*") ""))))
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "pytest")))))))
(home-page "https://github.com/banesullivan/scooby")
(synopsis "Report hardware information and Python package versions")
(description
"The Scooby package reports the following information about the currently
running system:
@itemize
@item operating system name;
@item hardware information including machine type (e.g., @samp{i386},
@samp{x86_64}, etc.), CPU count and total RAM;
@item Python environment (e.g., Python, IPython, etc.);
@item file system name;
@item Python version;
@item versions of specified Python packages.
@end itemize
It can generate reports as HTML tables or plain text lists.
Scooby has no required dependencies, and only few optional dependencies.")
(license license:expat)))
(define-public python-cymem
(package
(name "python-cymem")
(version "2.0.6")
(source (origin
(method url-fetch)
(uri (pypi-uri "cymem" version))
(sha256
(base32
"0pkyy60zk9654sj991w111p1l0m8wvz36nslw96x6nb9h6sjb5qn"))))
(build-system python-build-system)
(native-inputs
(list python-cython
python-pytest))
(inputs
(list python))
(arguments
(list
#:modules '((ice-9 ftw)
(ice-9 match)
(guix build utils)
(guix build python-build-system))
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'set-source-file-times-to-1980
;; XXX One of the tests uses a ZIP library to pack up some of the
;; source tree, and fails with "ZIP does not support timestamps
;; before 1980". Work around this by setting the file times in the
;; source tree to sometime in early 1980.
(lambda _
(let ((circa-1980 (* 10 366 24 60 60)))
(ftw "." (lambda (file stat flag)
(utime file circa-1980 circa-1980)
#t))))))))
(home-page "https://github.com/explosion/cymem")
(synopsis "Cython memory pool for RAII-style memory management")
(description
"Cymem provides two small memory-management helpers for Cython. They make it
easy to tie memory to a Python object's life-cycle, so that the memory is freed
when the object is garbage collected.")
(license license:expat)))
(define-public python-preshed
(package
(name "python-preshed")
(version "3.0.6")
(source (origin
(method url-fetch)
(uri (pypi-uri "preshed" version))
(sha256
(base32
"0akpydd23xqxx9d04drsnw9140rb3cv07r1zpzqz5wm0lf47afzv"))))
(build-system python-build-system)
(native-inputs (list python-cython python-cymem python-pytest))
(inputs (list python python-cymem python-murmurhash))
(arguments
(list #:modules
'((ice-9 ftw) (ice-9 match)
(guix build utils)
(guix build python-build-system))
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'set-source-file-times-to-1980
(lambda _
(let ((circa-1980 (* 10 366 24 60 60)))
(ftw "."
(lambda (file stat flag)
(utime file circa-1980 circa-1980) #t))))))))
(home-page "https://github.com/explosion/preshed")
(synopsis "Cython hash tables that assume keys are pre-hashed")
(description
"Simple but high performance Cython hash table mapping pre-randomized keys
to void* values.")
(license license:expat)))
(define-public python-catalogue
(package
(name "python-catalogue")
(version "2.0.7")
(source (origin
(method url-fetch)
(uri (pypi-uri "catalogue" version))
(sha256
(base32
"0srdxiil2xys8q1gpc1nvzhvis3a33d8a7amk2i1rlpbg6p36pak"))))
(build-system python-build-system)
(native-inputs (list python-pytest))
(inputs (list python python-zipp python-typing-extensions python-mypy))
(home-page "https://github.com/explosion/catalogue")
(synopsis "Lightweight function registries for your library")
(description
"\"catalogue\" is a tiny, zero-dependencies library that
makes it easy to add function (or object) registries to your code. Function
registries are helpful when you have objects that need to be both easily
serializable and fully customizable. Instead of passing a function into your
object, you pass in an identifier name, which the object can use to lookup the
function from the registry. This makes the object easy to serialize, because the
name is a simple string. If you instead saved the function, you'd have to use
Pickle for serialization, which has many drawbacks.")
(license license:expat)))
(define-public python-wasabi
(package
(name "python-wasabi")
(version "0.9.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "wasabi" version))
(sha256
(base32
"1kwqfalq7qxs9f7xb2m055g01qpbznyzxl7sjnzjdvvhkczg39md"))))
(build-system python-build-system)
(native-inputs (list python-pytest))
(home-page "https://github.com/ines/wasabi")
(synopsis "Console printing and formatting toolkit")
(description
"This package provides a lightweight console printing and formatting
toolkit for Python.")
(license license:expat)))
(define-public python-srt
(package
(name "python-srt")
(version "3.5.2")
(source (origin
(method url-fetch)
(uri (pypi-uri "srt" version))
(sha256
(base32
"0l24710spxarijmv3h7iicvx0lv6m3d4xg77nd9kyv8jwifav93s"))))
(build-system python-build-system)
(home-page "https://github.com/cdown/srt")
(synopsis "SRT parsing library")
(description
"This package provides a Python library for parsing, modifying, and
composing subtitles in the SRT file format.")
(license license:expat)))
(define-public python-gatt
(package
(name "python-gatt")
(version "0.2.7")
(source (origin
(method url-fetch)
(uri (pypi-uri "gatt" version))
(sha256
(base32
"0fjf066jixk30fr8xwfalwfnhqpr56yv0cccyypnx2qp9bi9svb2"))))
(propagated-inputs (list python-dbus python-pygobject))
(build-system python-build-system)
(home-page "https://github.com/getsenic/gatt-python")
(synopsis "Bluetooth GATT SDK for Python")
(description "The Bluetooth @acronym{GATT, Generic ATTribute Profile}
@acronym{SDK, Software Development Kit} for Python helps you implement and
communicate with any Bluetooth Low Energy device that has a GATT
profile. It supports:
@itemize @bullet
@item Discovering nearby Bluetooth Low Energy devices
@item Connecting and disconnecting devices
@item Implementing your custom GATT profile
@item Accessing all GATT services
@item Accessing all GATT characteristics
@item Reading characteristic values
@item Writing characteristic values
@item Subscribing for characteristic value change notifications
@end itemize
Currently, Linux is the only platform supported by this library.")
(license license:expat)))
(define-public python-clrprint
(package
(name "python-clrprint")
(version "2.0.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "clrprint" version))
(sha256
(base32
"0xfn8d1by2w7pjiji887qljk1avn4fylbnz1mj28gysm5g0zvy43"))))
(build-system python-build-system)
(arguments '(#:tests? #f)) ;there are no tests
(propagated-inputs (list python-colorama python-termcolor))
(home-page "https://github.com/AbhijithAJ/clrprint")
(synopsis "Print colorful output in the terminal")
(description "@code{clrprint} is developed to print colorful output in the
terminal. It has red, blue, green, yellow, purple and black/white (default)
colors.")
(license license:expat)))
(define-public python-mido
(package
(name "python-mido")
(version "1.3.2")
(source (origin
(method url-fetch)
(uri (pypi-uri "mido" version))
(sha256
(base32
"0j63cydiinfyrvlhydzsb00cb7dyvrw3bnhjbdyp63vkxnv2isis"))))
(build-system pyproject-build-system)
(arguments
(list #:phases
#~(modify-phases %standard-phases
;; This package requires python-packaging~=23.1 which is not yet
;; updated to. As per pyproject.toml, it is required to provide
;; a nice version_info opbject.
;; TODO: After updating python-packaging, fix this.
(delete 'sanity-check))))
(propagated-inputs (list python-importlib-metadata python-packaging))
(native-inputs (list python-pytest))
(home-page "https://mido.readthedocs.io/en/stable/")
(synopsis "MIDI Objects for Python")
(description "This library is for working with MIDI 1.0 ports, messages and
files.")
(license license:expat)))
(define-public python-musical-scales
(package
(name "python-musical-scales")
(version "1.0.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "musical-scales" version))
(sha256
(base32
"1ckn8n37i7b65h0i385ycn0w8sg9na0iabz0kmhxxc1wj0hddkw9"))))
(build-system python-build-system)
(native-inputs (list python-wheel))
(home-page "https://github.com/hmillerbakewell/musical-scale")
(synopsis "Retrieve a scale based on a given mode and starting note")
(description
"Retrieve a scale based on a given mode and starting note.
Information about these scales can be
@url{https://en.wikipedia.org/wiki/List_of_musical_scales_and_modes, found on
Wikipedia}.")
(license license:expat)))
(define-public python-langcodes
(package
(name "python-langcodes")
(version "3.3.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "langcodes" version))
(sha256
(base32
"1xkyh3qdcigb18qiimbwl2669y22hhdmd89mqcd270c7lbahfkbr"))))
(build-system python-build-system)
(native-inputs (list python-pytest))
(home-page "https://github.com/rspeer/langcodes")
(synopsis "Python library for working with language codes")
(description
"This package provides a Python library for working with and comparing
language codes.
@code{python-langcodes} implements @url{http://tools.ietf.org/html/bcp47, BCP
47}, the IETF Best Current Practices on Tags for Identifying Languages. BCP
47 is also known as RFC 5646. It subsumes ISO 639 and is backward compatible
with it, and it also implements recommendations from the
@url{http://cldr.unicode.org/, Unicode CLDR}.
@code{python-langcodes} can also refer to a database of language properties
and names, built from Unicode CLDR and the IANA subtag registry, if you
install @code{python-language-data}.")
(license license:expat)))
(define-public python-geomet
(package
(name "python-geomet")
(version "0.3.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "geomet" version))
(sha256
(base32
"06rfvadx5dr5xrgsc5bsmqil9c9kff6i13xl988gy0gfg0cl2lnb"))))
(build-system python-build-system)
(propagated-inputs (list python-click python-six))
(home-page "https://github.com/geomet/geomet")
(synopsis "Convert GeoJSON to WKT/WKB (Well-Known Text/Binary) or
GeoPackage Binary")
(description "This package provides utilities and functions for converting
GeoJSON to WKT/WKB (Well-Known Text/Binary) or GeoPackage Binary, and vice
versa. Extended WKB/WKT are also supported.")
(license license:asl2.0)))
(define-public python-cogapp
(package
(name "python-cogapp")
(version "3.3.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "cogapp" version))
(sha256
(base32
"1c0xx3p3lzrlyqhmccyq9c50f8v9pqk2992gb4nl50h2yy1m3s8v"))))
(build-system pyproject-build-system)
(native-inputs (list python-pytest))
(home-page "https://nedbatchelder.com/code/cog")
(synopsis "Content generation tool that leverages Python")
(description "Cog is a file generation tool. It allows using pieces of
Python code as generators in your source files to generate arbitrary text.")
(license license:expat)))
(define-public python-bsdiff4
(package
(name "python-bsdiff4")
(version "1.2.2")
(home-page "https://github.com/ilanschnell/bsdiff4")
(source (origin
(method git-fetch)
(uri (git-reference
(url home-page)
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"1fa0vkmbr0a9xifq7i5gfcf7ifn739i1fdij8awynm299fsqvvhx"))))
(build-system python-build-system)
(synopsis "Binary diff and patch using the BSDIFF4 format")
(description "This package provides a Python library for the @code{bsdiff}
binary diff utility. It also provides two command-line tools, @code{bsdiff4}
and @code{bspatch4}.")
(license license:bsd-2)))
(define-public python-mpv
(package
(name "python-mpv")
(version "1.0.7")
(source
(origin
;; python-mpv from pypi does not include the tests directory.
(method git-fetch)
(uri (git-reference
(url "https://github.com/jaseg/python-mpv")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "102fajzrcgxapsanh0phlqmk9q2v95bvix6mrkg8rypv717idins"))))
(build-system pyproject-build-system)
(arguments
(list #:phases
#~(modify-phases %standard-phases
(add-before 'build 'patch-reference-to-mpv
(lambda* (#:key inputs #:allow-other-keys)
;; Without an absolute path it is not able find and load libmpv.
(substitute* "mpv.py"
(("sofile = .*")
(string-append "sofile = \""
(search-input-file inputs "/lib/libmpv.so")
"\"\n")))))
(add-before 'check 'prepare-for-tests
(lambda _
;; Fontconfig throws errors when it has no cache dir to use.
(setenv "XDG_CACHE_HOME" (getcwd))
;; Some tests fail without a writable and readable HOME.
(setenv "HOME" (getcwd))
(setenv "PY_MPV_SKIP_TESTS"
"test_wait_for_property_event_overflow"))))))
(native-inputs
;; For tests.
(list python-pytest
python-pyvirtualdisplay
python-xvfbwrapper))
(inputs (list mpv))
(propagated-inputs (list python-pillow)) ;for raw screenshots
(home-page "https://github.com/jaseg/python-mpv")
(synopsis "Python interface to the mpv media player")
(description
"python-mpv is a ctypes-based python interface to the mpv media player.
It gives you more or less full control of all features of the player, just
as the lua interface does.")
;; From the project's README:
;; python-mpv inherits the underlying libmpv's license, which can be either
;; GPLv2 or later (default) or LGPLv2.1 or later. For details, see the mpv
;; copyright page.
(license license:gpl2+)))
(define-public python-biblib
(let ((upstream-version "0.1.0")
(commit "ab0e857b9198fe425ec9b02fcc293b5d9fd0c406")
(revision "1"))
(package
(name "python-biblib")
(version (git-version upstream-version revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/aclements/biblib")
(commit commit)))
(sha256
(base32 "1ym1gwxys9gl5a7fjs6xh5z9w50pnq4z3rs6fx7kpv78hlrbjlip"))
(file-name (git-file-name name version))))
(build-system python-build-system)
(home-page "https://github.com/aclements/biblib")
(synopsis "BibTeX parsing and transformation library")
(description
"Biblib provides a simple, standalone Python 3 package for parsing
BibTeX bibliographic databases, as well as algorithms for manipulating BibTeX
entries in BibTeX-y ways. Biblib's parser is derived directly from the WEB
source code for BibTeX and hence (barring bugs in translation) should be fully
compatible with BibTeX's own parser.")
;; N.B. It seems the parser was translated from WEB by hand: this
;; package does not contain any generated files.
(license license:expat))))
(define-public python-i3ipc
(package
(name "python-i3ipc")
(version "2.2.1")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/altdesktop/i3ipc-python")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"13bzs9dcv27czpnnbgz7a037lm8h991c8gk0qzzk5mq5yak24715"))))
(build-system python-build-system)
(arguments (list #:tests? #f)) ;FIXME: some tests are unable to run
(propagated-inputs (list python-xlib))
(home-page "https://github.com/altdesktop/i3ipc-python")
(synopsis "Python library for controlling i3 and Sway")
(description
"This package provides a Python library for controlling the i3 and Sway
window managers.")
(license license:bsd-3)))
(define-public i3-autotiling
(package
(name "i3-autotiling")
(version "1.9.1")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/nwg-piotr/autotiling")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"010sw3b2nx5cl578drd3xj58wlza76zkzh1jhsp44chg1vvhacrx"))))
(build-system python-build-system)
(arguments (list #:tests? #f)) ;no tests
(native-inputs (list python-wheel))
(propagated-inputs (list python-i3ipc))
(home-page "https://github.com/nwg-piotr/autotiling")
(synopsis "Automatically tile windows in i3 and Sway")
(description
"Script for Sway and i3 to automatically switch the horizontal/vertical
window split orientation.")
(license license:gpl3)))
(define-public python-cyclic
(package
(name "python-cyclic")
(version "1.0.0")
(source (origin
;; Use git, as there are some test files missing from the PyPI
;; release, see https://github.com/neurobin/cyclic/issues/1
(method git-fetch)
(uri (git-reference
(url "https://github.com/neurobin/cyclic")
;; Release is not tagged on github, see
;; https://github.com/neurobin/cyclic/issues/2
(commit "bf616c47ea49a43500ea55a1e6f4890323be0679")))
(file-name (git-file-name name version))
(sha256
(base32
"0r8zzjdv70fpxssxps62rlgpii8fr9gh8gykdygqn6mkdnfjwgjc"))))
(build-system python-build-system)
(home-page "https://github.com/neurobin/cyclic")
(synopsis "Handle cyclic relations")
(description "This package handles cyclic relations compared by value.")
(license license:bsd-3)))
(define-public python-rcslice
(package
(name "python-rcslice")
(version "1.1.0")
(source (origin
;; Use git, as there are some test files missing from the PyPI
;; release, see https://github.com/neurobin/rcslice/issues/1
(method git-fetch)
(uri (git-reference
(url "https://github.com/neurobin/rcslice")
;; Releases are not tagged on github, see
;; https://github.com/neurobin/rcslice/issues/2
(commit "1e1ef42cd262db76b67ded430630d5b499790f42")))
(file-name (git-file-name name version))
(sha256
(base32
"1lmhcgghh60kvdlx0cin1phhgfy9jivc6l0mb4ibnpa1x1md0zvv"))))
(build-system python-build-system)
(home-page "https://github.com/neurobin/rcslice")
(synopsis "Slice a list of sliceables")
(description "This package provides Python module to slice a list of
sliceables (1 indexed, both start and end index are inclusive). Helps to
slice file content line by line or column by column or a combination of
both.")
(license license:bsd-3)))
(define-public python-types-orjson
(package
(name "python-types-orjson")
(version "3.6.2")
(source (origin
(method url-fetch)
(uri (pypi-uri "types-orjson" version))
(sha256
(base32
"0f66lf2qrl9d4vad42db3dmnzv89h4rr05r5zxx5qcl6kb3zr6ng"))))
(build-system python-build-system)
(home-page "https://github.com/python/typeshed")
(synopsis "Typing stubs for orjson")
(description "This is a PEP 561 type stub package for the @code{orjson}
package. It can be used by type-checking tools like mypy, PyCharm, pytype
etc. to check code that uses @code{orjson}.")
(license license:asl2.0)))
(define-public python-rpds-py
(package
(name "python-rpds-py")
(version "0.10.6")
(source (origin
(method url-fetch)
(uri (pypi-uri "rpds_py" version))
(sha256
(base32
"0l5slkvhq2vf64mapimmj6ginsv01mc4niyj90vvz3assq4agrac"))))
(build-system cargo-build-system)
(arguments
(list
#:imported-modules `(,@%cargo-build-system-modules
,@%pyproject-build-system-modules)
#:modules '((guix build cargo-build-system)
((guix build pyproject-build-system) #:prefix py:)
(guix build utils))
#:phases
#~(modify-phases %standard-phases
(add-after 'build 'build-python-module
(assoc-ref py:%standard-phases 'build))
(add-after 'build-python-module 'install-python-module
(assoc-ref py:%standard-phases 'install)))
#:cargo-inputs
`(("rust-archery" ,rust-archery-1)
("rust-pyo3" ,rust-pyo3-0.19)
("rust-rpds" ,rust-rpds-1))
#:install-source? #false))
(inputs
(list maturin))
(native-inputs
(list python-wrapper))
(home-page "https://github.com/crate-py/rpds")
(synopsis "Bindings to Rust rpds for persistent data structures")
(description "This package provides Python bindings to the Rust rpds crate
for persistent data structures. It was written initially to support replacing
@code{python-pyrsistent}.")
(license license:expat)))
(define-public python-nanoid
;; There are no tests on PyPi.
(let ((commit "061f9a598f310b0e2e91b9ed6ce725a22770da64")
(revision "0"))
(package
(name "python-nanoid")
(version "2.0.0")
(source
(origin
(method git-fetch)
(uri
(git-reference
(url "https://github.com/puyuan/py-nanoid")
(commit commit)))
(file-name (git-file-name name commit))
(sha256
(base32 "0y1bcw0h27g8rkqq7cp33ywn0i0lp0q3rjixzkh4191y1dp9yf8s"))))
(build-system python-build-system)
(native-inputs (list python-pytest))
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? inputs outputs #:allow-other-keys)
(when tests?
(invoke "pytest")))))))
(home-page "https://github.com/puyuan/py-nanoid")
(synopsis "Unique string ID generator")
(description
"This package provides a tiny, secure, URL-friendly, unique string ID
generator for Python.")
(license license:expat))))
(define-public python-misskey
(package
(name "python-misskey")
(version "4.1.0")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/YuzuRyo61/Misskey.py")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0rma8pdsjsy00cg76q6q4qki4xpldykmz1m6dl3w2bjjxfhlbaz5"))))
(build-system python-build-system)
(arguments (list #:tests? #f)) ;needs network
(propagated-inputs (list python-requests))
(home-page "https://misskeypy.readthedocs.io")
(synopsis "Python bindings for Misskey's API")
(description
"This package provides access to Misskey's API. Misskey is a SNS
platform using the ActivityPub protocol.")
(license license:expat)))
(define-public python-lief
(package
(name "python-lief")
(version "0.12.3")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/lief-project/LIEF")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"11i6hqmcjh56y554kqhl61698n9v66j2qk1c1g63mv2w07h2z661"))))
(build-system python-build-system)
(native-inputs (list cmake))
(arguments
(list
#:tests? #f ;needs network
#:phases #~(modify-phases %standard-phases
(replace 'build
(lambda _
(invoke
"python" "setup.py" "--sdk" "build"
(string-append
"-j" (number->string (parallel-job-count)))))))))
(home-page "https://github.com/lief-project/LIEF")
(synopsis "Library to instrument executable formats")
(description
"@code{python-lief} is a cross platform library which can parse, modify
and abstract ELF, PE and MachO formats.")
(license license:asl2.0)))
(define-public python-eris
(package
(name "python-eris")
(version "0.0.2")
(source (origin
(method url-fetch)
(uri (pypi-uri "eris" version))
(sha256
(base32
"16wbmahmfzdzrsjbn8jzi79vhghrzvvlcgnym20q0v3p3i4x47pq"))))
(build-system python-build-system)
(propagated-inputs (list python-pycryptodome))
(home-page "https://codeberg.org/eris/python-eris")
(synopsis "Python implementation of ERIS")
(description
"Python implementation of the @acronym{ERIS, Encoding for Robust Immutable
Storage}.")
(license license:lgpl3+)))
(define-public shrinkwrap
(package
(name "shrinkwrap")
(version "0.1.0")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/fzakaria/shrinkwrap")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(modules '((guix build utils)))
(snippet '(substitute* "pyproject.toml"
(("lief = \"0\\.12\\.0\"") "lief = \"*\"")))
(sha256
(base32
"1f3qrygj16y767q2c7pn9j6m95ggcmj9s5cx9v92ygygly4mr3jp"))))
(build-system pyproject-build-system)
(native-inputs
(list python-click
python-poetry-core
python-pypa-build
python-pytest))
(inputs (list python-lief python-sh))
(home-page "https://github.com/fzakaria/shrinkwrap")
(synopsis "Emboss needed dependencies on the top level executable")
(description
"@code{shrinkwrap} is a tool which will discover all transitive dynamic
shared objects, and lift them up to the executable referenced by absolute
path.")
(license license:expat)))
(define-public staticsite
(package
(name "staticsite")
(version "2.3")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/spanezz/staticsite")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1rhr25xydvnlrrcz389j3f6nknmczm5x11cagrji1qww70piwy08"))))
(build-system pyproject-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'use-themes-in-output
(lambda _
(substitute* "staticsite/global_settings.py"
(("/usr/share/staticsite") #$output))))
(add-after 'install 'install-themes
(lambda _
(let ((themedir (string-append #$output "/themes")))
(copy-recursively "themes" themedir)))))))
(native-inputs
(list perl-image-exiftool
python-dateutil
python-docutils
python-jinja2
python-markdown
python-pillow
python-pyinotify
python-pytz
python-pyyaml
python-ruamel.yaml
python-slugify
python-tornado
tzdata-for-tests))
(home-page "https://github.com/spanezz/staticsite")
(synopsis "Static site generator")
(description "Statistic is a static site generator based on Markdown and
Jinja2.")
(license (list license:gpl3+ license:expat))))
(define-public python-pymonad
(package
(name "python-pymonad")
(version "2.4.0")
;; The tests are incomplete in the PyPI archive.
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/jasondelaat/pymonad")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0ci1mpydldiyg9qv6d19ljhfh7wxlrl2k4mlvqd9bm7dqvpdjsx7"))))
(build-system python-build-system)
(arguments
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda* (#:key tests? #:allow-other-keys)
(when tests?
(invoke "./run_tests.sh")))))))
(home-page "https://github.com/jasondelaat/pymonad")
(synopsis "Monadic style functional programming for Python")
(description "@code{python-pymonad} implements data structures typically
available in purely functional or functional first programming languages such
as Haskell and F#. Included are
@itemize
@item Monad and Monoid data types with several common monads such as Maybe and
State
@item Useful tools such as the @code{@@curry} decorator for defining curried
functions
@item Type annotations to help ensure correct usage
@end itemize")
(license license:bsd-3)))
(define-public python-markdown-strings
(package
(name "python-markdown-strings")
(version "3.3.0")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/awesmubarak/markdown_strings.git")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32
"0064ni7s3k8hqw61wi9m31icxp61f8adhija2qsp46hclcwx7vz2"))))
(build-system python-build-system)
(propagated-inputs (list python-lxml python-six))
(home-page "https://github.com/awesmubarak/markdown_strings")
(synopsis "Python library to create markdown-formatted text")
(description "This package allows the programmatic creation of
markdown-compliant strings.")
(license license:expat)))
(define-public python-yattag
(package
(name "python-yattag")
(version "1.15.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "yattag" version))
(sha256
(base32 "05p4dgdp8wwvnsvcv7n4zn8k602w345kw4vq67s9d792w55sa3wn"))))
(build-system python-build-system)
(synopsis "HTML or XML generator for Python")
(description
"Yattag is a Python library for generating HTML or XML in a pythonic way.")
(home-page "https://www.yattag.org/")
(license license:lgpl2.1)))
(define-public python-zbarlight
(package
(name "python-zbarlight")
(version "3.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "zbarlight" version))
(sha256
(base32
"1v5c9bim8af6g8kgxp2dhm96n5vkr8sqi56w0bdh1xy49v03lw3g"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-pillow))
(inputs (list zbar))
(home-page "https://github.com/Polyconseil/zbarlight")
(synopsis "Simple Python wrapper for the zbar barcode library")
(description "Zbarlight is a simple wrapper for the zbar library. It can
read all zbar supported codes.")
(license license:bsd-3)))
(define-public python-zeroc-ice
(package
(name "python-zeroc-ice")
(version "3.7.9")
(source (origin
(method url-fetch)
(uri (pypi-uri "zeroc-ice" version))
(sha256
(base32
"0bqkrjxp2fbz34x3wxkxji39kxinypzg8q2994sibiay29mpipxb"))))
(build-system pyproject-build-system)
(inputs (list openssl))
(home-page "https://zeroc.com")
(synopsis "RPC framework")
(description
"Ice is a comprehensive RPC framework. Ice helps you network your
software by taking care of all interactions with low-level network programming
interfaces.")
(license license:gpl2)))
(define-public python-islenska
(package
(name "python-islenska")
(version "1.0.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "islenska" version))
(sha256
(base32 "0fdp90mzy0sd4kyw8kd8kybd1ni765fvqn8hz2wx5sqbjjkm4d5k"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-cffi python-typing-extensions))
(home-page "https://github.com/mideind/BinPackage")
(synopsis
"Vocabulary of the modern Icelandic language, in a Python package")
(description
"Islenska is a Python package that embeds the vocabulary of the Database
of Icelandic Morphology and offers various lookups and queries of the data.
The database contains over 6.5 million entries, over 3.1 million unique word
forms, and about 300,000 distinct lemmas.")
(license license:expat)))
(define-public python-icecream
(package
(name "python-icecream")
(version "2.1.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "icecream" version))
(sha256
(base32 "1pj9kf7lwm799wppvngg3sndi0qf13iq33yhl59n3hsf6z1sg90a"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
'(list "-k"
;; These tests are failing due to a bug:
;; https://github.com/gruns/icecream/issues/144
(string-append "not testEnableDisable"
" and not testSingledispatchArgumentToString"))))
(propagated-inputs (list python-asttokens python-colorama python-executing
python-pygments))
(native-inputs (list python-hypothesis python-pytest))
(home-page "https://github.com/gruns/icecream")
(synopsis
"Single function call to debug variables, expressions, and program execution")
(description
"This tool lets you debug variables, expressions, and program execution
with one function call. IceCream makes print debugging a little sweeter.")
(license license:expat)))
(define-public python-icegrams
(package
(name "python-icegrams")
(version "1.1.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "icegrams" version))
(sha256
(base32 "1ajcjngvr4rlgb0q6p6vjz2sncwhvq3msjy6qaiz5g37vgvw2ij8"))))
(build-system pyproject-build-system)
(propagated-inputs (list python-cffi))
(home-page "https://github.com/mideind/Icegrams")
(synopsis "Trigram statistics for Icelandic")
(description
"Icegrams is a Python package that encapsulates a large trigram
library for Icelandic. You can use Icegrams to obtain probabilities (relative
frequencies) of over a million different unigrams (single words or tokens), or of
bigrams (pairs of two words or tokens), or of trigrams. Icegrams is useful for
instance in spelling correction, predictive typing, to help disabled people
write text fast, and for various text generation, statistics, and modeling tasks.")
(license license:expat)))
(define-public python-zeroc-ice-3.6
(package
(inherit python-zeroc-ice)
(version "3.6.5")
(source (origin
(method url-fetch)
(uri (pypi-uri "zeroc-ice" version))
(sha256
(base32
"0mikjfvq26kh8asnn9v55z41pap4c5ypymqnwwi4xkavc3mzyda2"))))))
(define-public python-xmp-toolkit
(package
(name "python-xmp-toolkit")
(version "2.0.2")
(source
(origin
(method url-fetch)
(uri (pypi-uri "python-xmp-toolkit" version))
(sha256
(base32 "12x6lyaxjpbl8ll3cj97039kwvsha2nkx2v8v8irfbi2p0dl721s"))
(patches (search-patches
"python-xmp-toolkit-add-missing-error-codes.patch"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
#~(list "-k" (string-append "not test_can_put_xmp and "
"not test_exempi_bad_combinations and "
"not test_formats and "
"not test_get_xmp and "
"not test_open_file_with_options"))
#:phases
#~(modify-phases %standard-phases
(add-before 'build 'configure-environment
(lambda* (#:key outputs inputs #:allow-other-keys)
(let ((exempi #$(this-package-input "exempi")))
(setenv "LD_LIBRARY_PATH"
(string-append exempi "/lib"))))))))
(inputs (list exempi))
(propagated-inputs (list python-pytz))
(native-inputs (list python-pytest))
(home-page "https://github.com/python-xmp-toolkit/python-xmp-toolkit")
(synopsis "Python XMP Toolkit for working with metadata.")
(description "Python XMP Toolkit is a library for working with XMP
metadata, as well as reading/writing XMP metadata stored in many different
file formats.
Python XMP Toolkit is wrapping Exempi (using ctypes), a C/C++ XMP library
based on Adobe XMP Toolkit, ensuring that future updates to the XMP standard
are easily incorporated into the library with a minimum amount of work.")
(license license:bsd-3)))
;;;
;;; Avoid adding new packages to the end of this file. To reduce the chances
;;; of a merge conflict, place them above by existing packages with similar
;;; functionality or similar names.
;;;
