;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2014 John Darrington <jmd@gnu.org>
;;; Copyright © 2014, 2015, 2018 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2015 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2016 Eric Bavier <bavier@member.fsf.org>
;;; Copyright © 2015, 2019, 2020, 2021 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2017 Thomas Danckaert <post@thomasdanckaert.be>
;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018 Arun Isaac <arunisaac@systemreboot.net>
;;; Copyright © 2018, 2019, 2021 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2018, 2020, 2023 Maxim Cournoyer <maxim.cournoyer@gmail.com>
;;; Copyright © 2018, 2020 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2019 Mathieu Othacehe <m.othacehe@gmail.com>
;;; Copyright © 2019, 2020 Giacomo Leidi <goodoldpaul@autistici.org>
;;; Copyright © 2020, 2022 Marius Bakke <marius@gnu.org>
;;; Copyright © 2020 Jonathan Brielmaier <jonathan.brielmaier@web.de>
;;; Copyright © 2020 Jan (janneke) Nieuwenhuizen <janneke@gnu.org>
;;; Copyright © 2021, 2022 Greg Hogan <code@greghogan.com>
;;; Copyright © 2021 Franck Pérignon <franck.perignon@univ-grenoble-alpes.fr>
;;; Copyright © 2021 Aleksandr Vityazev <avityazev@posteo.org>
;;;
;;; This file is part of GNU Guix.
;;;
;;; GNU Guix is free software; you can redistribute it and/or modify it
;;; under the terms of the GNU General Public License as published by
;;; the Free Software Foundation; either version 3 of the License, or (at
;;; your option) any later version.
;;;
;;; GNU Guix is distributed in the hope that it will be useful, but
;;; WITHOUT ANY WARRANTY; without even the implied warranty of
;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;;; GNU General Public License for more details.
;;;
;;; You should have received a copy of the GNU General Public License
;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
(define-module (gnu packages boost)
#:use-module ((guix licenses) #:prefix license:)
#:use-module (guix utils)
#:use-module (guix gexp)
#:use-module (guix packages)
#:use-module (guix download)
#:use-module (guix git-download)
#:use-module (guix build-system gnu)
#:use-module (guix build-system trivial)
#:use-module (gnu packages)
#:use-module (gnu packages autotools)
#:use-module (gnu packages compression)
#:use-module (gnu packages icu4c)
#:use-module (gnu packages llvm)
#:use-module (gnu packages perl)
#:use-module (gnu packages python)
#:use-module (gnu packages shells)
#:use-module (gnu packages mpi))
(define (version-with-underscores version)
(string-map (lambda (x) (if (eq? x #\.) #\_ x)) version))
(define (boost-patch name version hash)
(origin
(method url-fetch)
(uri (string-append "https://www.boost.org/patches/"
(version-with-underscores version) "/" name))
(file-name (string-append "boost-" name))
(sha256 (base32 hash))))
(define-public boost
(package
(name "boost")
(version "1.83.0")
(source (origin
(method url-fetch)
(uri (string-append "https://boostorg.jfrog.io/artifactory/main/release/"
version "/source/boost_"
(version-with-underscores version) ".tar.bz2"))
(patches
(append
(search-patches "boost-fix-duplicate-definitions-bug.patch")
(list (boost-patch
"0001-unordered-fix-copy-assign.patch" version
"09j61m5xh7099k5na9i43x5rra51znf7vm2nyh89yqpizcll9q66"))))
(patch-flags '("-p2"))
(sha256
(base32
"13iviiwk1srpw9dmiwabkxv56v0pl0zggjp8zxy1419k5zzfsy34"))))
(build-system gnu-build-system)
(inputs
(append
(list icu4c zlib)
(if (%current-target-system)
'()
(list python-minimal-wrapper))))
(native-inputs
(list perl tcsh))
(arguments
(list
#:imported-modules `((guix build python-build-system)
,@%default-gnu-imported-modules)
#:modules `(((guix build python-build-system) #:select (python-version))
,@%default-gnu-modules)
#:tests? #f
#:configure-flags
#~(let ((icu (dirname (dirname (search-input-file
%build-inputs "bin/uconv")))))
(list
;; Auto-detection looks for ICU only in traditional
;; install locations.
(string-append "--with-icu=" icu)
;; Ditto for Python.
#$@(if (%current-target-system)
#~()
#~((let ((python (dirname (dirname (search-input-file
%build-inputs
"bin/python")))))
(string-append "--with-python-root=" python)
(string-append "--with-python=" python
"/bin/python")
(string-append "--with-python-version="
(python-version python)))))
"--with-toolset=gcc"))
#:make-flags
#~(list "threading=multi" "link=shared"
;; Set the RUNPATH to $libdir so that the libs find each other.
(string-append "linkflags=-Wl,-rpath="
#$output "/lib")
#$@(if (%current-target-system)
#~("--user-config=user-config.jam"
;; Python is not supported when cross-compiling.
"--without-python"
"binary-format=elf"
"target-os=linux"
#$@(cond
((string-prefix? "arm" (%current-target-system))
#~("abi=aapcs"
"address-model=32"
"architecture=arm"))
((string-prefix? "aarch64" (%current-target-system))
#~("abi=aapcs"
"address-model=64"
"architecture=arm"))
(else #~())))
#~()))
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'patch-shells
(lambda _
(substitute* '("libs/config/configure"
"libs/spirit/classic/phoenix/test/runtest.sh"
"tools/build/src/engine/execunix.cpp")
(("/bin/sh") (which "sh")))))
(delete 'bootstrap)
(replace 'configure
(lambda* (#:key (configure-flags ''()) #:allow-other-keys)
(setenv "SHELL" (which "sh"))
(setenv "CONFIG_SHELL" (which "sh"))
#$@(if (%current-target-system)
#~((call-with-output-file "user-config.jam"
(lambda (port)
(format port
"using gcc : cross : ~a-c++ ;"
#$(%current-target-system)))))
#~())
(apply invoke "./bootstrap.sh"
(string-append "--prefix=" #$output)
configure-flags)))
(replace 'build
(lambda* (#:key make-flags #:allow-other-keys)
(apply invoke "./b2"
(format #f "-j~a" (parallel-job-count))
make-flags)))
(replace 'install
(lambda* (#:key make-flags #:allow-other-keys)
(apply invoke "./b2" "install" make-flags)))
#$@(if (%current-target-system)
#~()
#~((add-after 'install 'provide-libboost_python
(lambda* (#:key make-flags inputs outputs #:allow-other-keys)
(let* ((static? (member "link=static" make-flags))
(libext (if static? ".a" ".so"))
(python (dirname (dirname (search-input-file
inputs "bin/python"))))
(python-version (python-version python))
(libboost_pythonNN
(string-append "libboost_python"
(string-join (string-split
python-version #\.)
"")
libext)))
(with-directory-excursion (string-append #$output "/lib")
(symlink libboost_pythonNN
(string-append "libboost_python" libext))
;; Some packages only look for the major version.
(symlink libboost_pythonNN
(string-append "libboost_python"
(string-take python-version 1)
libext)))))))))))
(home-page "https://www.boost.org")
(synopsis "Peer-reviewed portable C++ source libraries")
(description
"A collection of libraries intended to be widely useful, and usable
across a broad spectrum of applications.")
(license (license:x11-style "https://www.boost.org/LICENSE_1_0.txt"
"Some components have other similar licences."))))
(define-public boost-for-source-highlight
(hidden-package (package (inherit boost)
(name "boost")
(version "1.83.0")
(source (origin
(method url-fetch)
(uri (string-append "https://boostorg.jfrog.io/artifactory/main/release/"
version "/source/boost_"
(version-with-underscores version) ".tar.bz2"))
(patches
(list (boost-patch
"0001-unordered-fix-copy-assign.patch" version
"09j61m5xh7099k5na9i43x5rra51znf7vm2nyh89yqpizcll9q66")))
(patch-flags '("-p2"))
(sha256
(base32
"13iviiwk1srpw9dmiwabkxv56v0pl0zggjp8zxy1419k5zzfsy34")))))))
;; Sadly, this is needed for irods. It won't link with 1.69 or later.
(define-public boost-for-irods
(package
(inherit boost)
(name "boost-for-irods")
(version "1.68.0")
(source (origin
(method url-fetch)
(uri (string-append
"mirror://sourceforge/boost/boost/" version "/boost_"
(string-map (lambda (x) (if (eq? x #\.) #\_ x)) version)
".tar.bz2"))
(sha256
(base32
"1dyqsr9yb01y0nnjdq9b8q5s2kvhxbayk34832k5cpzn7jy30qbz"))))
(build-system gnu-build-system)
(properties `((hidden? . #true)))
(inputs
`(("icu4c" ,icu4c)
("libcxx" ,libcxx+libcxxabi-6)
("libcxxabi" ,libcxxabi-6)
("zlib" ,zlib)))
(native-inputs
(list clang-6 perl tcsh))
(arguments
`(#:tests? #f
#:make-flags
(list "threading=multi" "link=shared"
"cxxflags=-stdlib=libc++"
"--without-python"
;; Set the RUNPATH to $libdir so that the libs find each other.
(string-append "linkflags=-stdlib=libc++ -Wl,-rpath="
(assoc-ref %outputs "out") "/lib"))
#:phases
(modify-phases %standard-phases
(delete 'bootstrap)
(add-after 'set-paths 'adjust-CPLUS_INCLUDE_PATH
(lambda* (#:key native-inputs inputs #:allow-other-keys)
(let ((gcc (assoc-ref (or native-inputs inputs) "gcc")))
(setenv "CPLUS_INCLUDE_PATH"
(string-join
(cons (search-input-directory inputs "/include/c++/v1")
;; Hide GCC's C++ headers so that they do not interfere with
;; the Clang headers.
(delete (string-append gcc "/include/c++")
(string-split (getenv "CPLUS_INCLUDE_PATH")
#\:)))
":"))
(format #true
"environment variable `CPLUS_INCLUDE_PATH' changed to ~a~%"
(getenv "CPLUS_INCLUDE_PATH")))))
(replace 'configure
(lambda* (#:key inputs outputs #:allow-other-keys)
(let ((icu (assoc-ref inputs "icu4c"))
(out (assoc-ref outputs "out"))
(sh (search-input-file inputs "/bin/sh")))
(substitute* '("libs/config/configure"
"libs/spirit/classic/phoenix/test/runtest.sh"
"tools/build/src/engine/execunix.c"
"tools/build/src/engine/Jambase"
"tools/build/src/engine/jambase.c")
(("/bin/sh") sh))
(setenv "SHELL" (which "sh"))
(setenv "CONFIG_SHELL" (which "sh"))
(invoke "./bootstrap.sh"
(string-append "--prefix=" out)
;; Auto-detection looks for ICU only in traditional
;; install locations.
(string-append "--with-icu=" icu)
"--with-toolset=clang"))))
(replace 'build
(lambda* (#:key make-flags #:allow-other-keys)
(apply invoke "./b2"
(format #f "-j~a" (parallel-job-count))
make-flags)))
(replace 'install
(lambda* (#:key make-flags #:allow-other-keys)
(apply invoke "./b2" "install" make-flags))))))))
(define-public boost-with-python3
(deprecated-package "boost-with-python3" boost))
(define-public boost-static
(package
(inherit boost)
(name "boost-static")
(arguments
(substitute-keyword-arguments (package-arguments boost)
((#:make-flags flags)
#~(cons "link=static" (delete "link=shared" #$flags)))))))
(define-public boost-for-mysql
;; Older version for MySQL 5.7.23.
(package
(inherit boost)
(version "1.59.0")
(source (origin
(method url-fetch)
(uri (string-append
"mirror://sourceforge/boost/boost/" version "/boost_"
(string-map (lambda (x) (if (eq? x #\.) #\_ x)) version)
".tar.bz2"))
(sha256
(base32
"1jj1aai5rdmd72g90a3pd8sw9vi32zad46xv5av8fhnr48ir6ykj"))))
(arguments
(substitute-keyword-arguments (package-arguments boost)
((#:configure-flags _ #~'())
#~(let ((icu (dirname (dirname (search-input-file
%build-inputs "bin/uconv")))))
(list
;; Auto-detection looks for ICU only in traditional
;; install locations.
(string-append "--with-icu=" icu)
"--with-toolset=gcc")))
((#:phases phases)
#~(modify-phases #$phases
(replace 'patch-shells
(lambda _
(substitute* (append
(find-files "tools/build/src/engine/" "execunix\\.c.*")
'("libs/config/configure"
"libs/spirit/classic/phoenix/test/runtest.sh"
"tools/build/doc/bjam.qbk"
"tools/build/src/engine/Jambase"))
(("/bin/sh") (which "sh")))))
(delete 'provide-libboost_python)))
((#:make-flags make-flags)
#~(cons* "--without-python" #$make-flags))))
(inputs
(modify-inputs (package-inputs boost)
(delete "python-minimal-wrapper")))
(properties '((hidden? . #t)))))
(define-public boost-sync
(let ((commit "e690de2d30e2f1649ff500c9a6f3539814994b1c")
(version "1.55")
(revision "2"))
(package
(name "boost-sync")
(version (git-version version revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/boostorg/sync")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"0473hb15affjq2804xa99ikk4y1gzi46rygd9zhncl28ib7mnn26"))))
(build-system trivial-build-system)
(arguments
`(#:modules ((guix build utils))
#:builder
(begin
(use-modules (guix build utils))
(let ((source (assoc-ref %build-inputs "source")))
(copy-recursively (string-append source "/include")
(string-append %output "/include"))))))
(home-page "https://github.com/boostorg/sync")
(synopsis "Boost.Sync library")
(description "The Boost.Sync library provides mutexes, semaphores, locks
and events and other thread related facilities. Boost.Sync originated from
Boost.Thread.")
(license (license:x11-style "https://www.boost.org/LICENSE_1_0.txt")))))
(define-public boost-signals2
(package
(name "boost-signals2")
(version (package-version boost))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/boostorg/signals2")
(commit (string-append "boost-" version))))
(file-name (git-file-name name version))
(sha256
(base32
"1prhj98jgvkj2m3ia5lcgxnl1a4h13cyzqd55skjn983rivi6090"))))
(build-system trivial-build-system)
(arguments
`(#:modules ((guix build utils))
#:builder
(begin
(use-modules (guix build utils))
(let ((source (assoc-ref %build-inputs "source")))
(copy-recursively (string-append source "/include")
(string-append %output "/include"))))))
(home-page "https://github.com/boostorg/signals2")
(synopsis "Boost.Signals2 library")
(description "The Boost.Signals2 library is an implementation of a managed
signals and slots system.")
(license (license:x11-style "https://www.boost.org/LICENSE_1_0.txt"))))
(define-public boost-mpi
(package
(inherit boost)
(name "boost-mpi")
(inputs
(modify-inputs (package-inputs boost)
(append openmpi)))
(arguments
(substitute-keyword-arguments (package-arguments boost)
((#:phases phases)
#~(modify-phases #$phases
(add-after 'configure 'update-jam
(lambda* (#:key inputs outputs #:allow-other-keys)
(let ((output-port (open-file "project-config.jam" "a")))
(display "using mpi ;" output-port)
(newline output-port)
(close output-port))))))))
(home-page "https://www.boost.org")
(synopsis "Message Passing Interface (MPI) library for C++")))
(define-public mdds
(package
(name "mdds")
(version "2.1.1")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://gitlab.com/mdds/mdds")
(commit version)))
(file-name (git-file-name name version))
(sha256
(base32
"0866020brc1kmiryh7dmhjamnywlsd56ks649hy87283k0p7d3bb"))))
(build-system gnu-build-system)
(native-inputs (list autoconf automake))
(propagated-inputs
(list boost)) ; inclusion of header files
(home-page "https://gitlab.com/mdds/mdds")
(synopsis "Multi-dimensional C++ data structures and indexing algorithms")
(description "Mdds (multi-dimensional data structure) provides a
collection of multi-dimensional data structures and indexing algorithms
for C++. It includes flat segment trees, segment trees, rectangle sets,
point quad trees, multi-type vectors and multi-type matrices.")
(license license:expat)))
