;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2014, 2016, 2017, 2018, 2019, 2020, 2021 Ludovic Courtès <ludo@gnu.org>
;;;
;;; This file is part of GNU Guix.
;;;
;;; GNU Guix is free software; you can redistribute it and/or modify it
;;; under the terms of the GNU General Public License as published by
;;; the Free Software Foundation; either version 3 of the License, or (at
;;; your option) any later version.
;;;
;;; GNU Guix is distributed in the hope that it will be useful, but
;;; WITHOUT ANY WARRANTY; without even the implied warranty of
;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;;; GNU General Public License for more details.
;;;
;;; You should have received a copy of the GNU General Public License
;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
(define-module (build-self)
#:use-module (gnu)
#:use-module (guix)
#:use-module (guix ui)
#:use-module (guix config)
#:use-module (guix modules)
#:use-module (guix build-system gnu)
#:use-module (srfi srfi-1)
#:use-module (srfi srfi-19)
#:use-module (srfi srfi-34)
#:use-module (srfi srfi-35)
#:use-module (rnrs io ports)
#:use-module (ice-9 match)
#:use-module (ice-9 popen)
#:export (build))
;;; Commentary:
;;;
;;; When loaded, this module returns a monadic procedure of at least one
;;; argument: the source tree to build. It returns a derivation that
;;; builds it.
;;;
;;; This file uses modules provided by the already-installed Guix. Those
;;; modules may be arbitrarily old compared to the version we want to
;;; build. Because of that, it must rely on the smallest set of features
;;; that are likely to be provided by the (guix) and (gnu) modules, and by
;;; Guile itself, forever and ever.
;;;
;;; Code:
;;;
;;; Generating (guix config).
;;;
;;; This is copied from (guix self) because we cannot assume (guix self) is
;;; available at this point.
;;;
(define %persona-variables
;; (guix config) variables that define Guix's persona.
'(%guix-package-name
%guix-version
%guix-bug-report-address
%guix-home-page-url))
(define %config-variables
;; (guix config) variables corresponding to Guix configuration.
(letrec-syntax ((variables (syntax-rules ()
((_)
'())
((_ variable rest ...)
(cons `(variable . ,variable)
(variables rest ...))))))
(variables %localstatedir %storedir %sysconfdir %system)))
(define* (make-config.scm #:key gzip xz bzip2
(package-name "GNU Guix")
(package-version "0")
(bug-report-address "bug-guix@gnu.org")
(home-page-url "https://guix.gnu.org"))
;; Hack so that Geiser is not confused.
(define defmod 'define-module)
(scheme-file "config.scm"
#~(begin
(#$defmod (guix config)
#:export (%guix-package-name
%guix-version
%guix-bug-report-address
%guix-home-page-url
%store-directory
%state-directory
%store-database-directory
%config-directory
%libz
%gzip
%bzip2
%xz))
;; XXX: Work around <http://bugs.gnu.org/15602>.
(eval-when (expand load eval)
#$@(map (match-lambda
((name . value)
#~(define-public #$name #$value)))
%config-variables)
(define %store-directory
(or (and=> (getenv "NIX_STORE_DIR") canonicalize-path)
%storedir))
(define %state-directory
;; This must match `NIX_STATE_DIR' as defined in
;;@@ -6532,13 +6532,13 @@ graphics packages that comes with the base installation.")
(define-public r-ctrdata
(package
(name "r-ctrdata")
- (version "1.15.2")
+ (version "1.16.0")
(source (origin
(method url-fetch)
(uri (cran-uri "ctrdata" version))
(sha256
(base32
- "0rqsz9wq4w0w2q0vha3dh7rwr3mnhp2gc1xb8hi30qk85zghjzml"))))
+ "13n5c7znlxkwqlv04vd5ynbkbq8f28dzbr3y66966971xnf7yhsm"))))
(properties `((upstream-name . "ctrdata")))
(build-system r-build-system)
(propagated-inputs
@@ -6550,9 +6550,12 @@ graphics packages that comes with the base installation.")
r-jsonlite
r-lubridate
r-nodbi
+ r-readr
r-stringi
r-tibble
- r-xml2))
+ r-v8
+ r-xml2
+ r-zip))
(native-inputs (list r-r-rsp))
(home-page "https://cran.r-project.org/package=ctrdata")
(synopsis "Retrieve and analyze clinical trials in public registers")
